bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_0124_orf1 Length=77 Score E Sequences producing significant alignments: (Bits) Value CE22886 41.6 4e-04 Hs5901998 39.7 0.001 At2g43810 39.3 0.002 SPAC2F3.17c 38.5 0.003 At3g59810 38.1 0.004 YDR378c 35.8 0.020 At5g38340 31.6 0.40 CE01067 30.0 0.97 ECU04g0790 30.0 1.1 SPBC3E7.14 29.3 2.0 7291213 28.1 4.0 At4g30220 27.3 7.8 At4g16340 26.9 8.4 > CE22886 Length=77 Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 0/37 (0%) Query 25 SGRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 S R+ P+EFL++V+G V+VKLNSGV Y+G L G Sbjct 2 SKRQNPAEFLKKVIGKPVVVKLNSGVDYRGILACLDG 38 > Hs5901998 Length=80 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 27/35 (77%), Gaps = 0/35 (0%) Query 27 RKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 ++TPS+FL++++G V+VKLNSGV Y+G L G Sbjct 5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDG 39 > At2g43810 Length=91 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 0/39 (0%) Query 23 ASSGRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 AS KTP++FL+ + G V+VKLNSGV Y+G L G Sbjct 8 ASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDG 46 > SPAC2F3.17c Length=75 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 0/33 (0%) Query 29 TPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 +P+EFL +V+G VL++L+SGV YKG L G Sbjct 4 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDG 36 > At3g59810 Length=91 Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 0/39 (0%) Query 23 ASSGRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 S KTP++FL+ + G V+VKLNSGV Y+G L G Sbjct 8 VSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDG 46 > YDR378c Length=123 Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Query 15 MTAKPPTSASSGRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 M+ K T S +EFL ++G V VKL SG++Y GRL++ G Sbjct 38 MSGKASTEGS----VTTEFLSDIIGKTVNVKLASGLLYSGRLESIDG 80 > At5g38340 Length=1059 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 0/32 (0%) Query 16 TAKPPTSASSGRKTPSEFLQRVLGGNVLVKLN 47 T+ S GR+ PS F R GG+VLV LN Sbjct 928 TSSSTCSILPGRRVPSNFTYRKTGGSVLVNLN 959 > CE01067 Length=278 Score = 30.0 bits (66), Expect = 0.97, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 0/38 (0%) Query 3 HLLQDFSAHCEEMTAKPPTSASSGRKTPSEFLQRVLGG 40 H Q S HCE P SA+ TP +++ R+L G Sbjct 54 HFDQATSTHCEVANWLPSISAAVSTYTPEKYIWRILIG 91 > ECU04g0790 Length=81 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 0/33 (0%) Query 26 GRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQA 58 R+ P +FLQR+ +V V L G +Y+G L A Sbjct 10 ARENPKQFLQRMKNRSVRVALKWGQVYEGTLVA 42 > SPBC3E7.14 Length=78 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 0/30 (0%) Query 29 TPSEFLQRVLGGNVLVKLNSGVIYKGRLQA 58 P FLQ ++G VLV+L G YKG LQ+ Sbjct 7 NPKPFLQGLIGKPVLVRLKWGQEYKGTLQS 36 > 7291213 Length=79 Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 0/37 (0%) Query 25 SGRKTPSEFLQRVLGGNVLVKLNSGVIYKGRLQAQHG 61 S ++ S+F+ ++ G V VKLN+GV Y+G L G Sbjct 2 SRKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDG 38 > At4g30220 Length=88 Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 0/30 (0%) Query 29 TPSEFLQRVLGGNVLVKLNSGVIYKGRLQA 58 P FL + G V+VKL G+ YKG L + Sbjct 7 NPKPFLNNLTGKTVIVKLKWGMEYKGFLAS 36 > At4g16340 Length=1120 Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust. Identities = 11/18 (61%), Positives = 16/18 (88%), Gaps = 0/18 (0%) Query 34 LQRVLGGNVLVKLNSGVI 51 LQR+L G+V V++NSGV+ Sbjct 1025 LQRILQGSVAVQVNSGVL 1042 Lambda K H 0.316 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1175087368 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40