bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0347_orf3
Length=55
Score E
Sequences producing significant alignments: (Bits) Value
HsMi004 79.7 1e-15
Hs22053514 71.6 3e-13
DmMi004 71.6 3e-13
AtMi014 63.2 1e-10
CEMi003 62.4 2e-10
SPMi010 62.0 2e-10
Hs20541261 58.9 2e-09
YMi025 53.1 1e-07
Hs17482743 51.6 4e-07
Hs22045066 42.7 2e-04
> HsMi004
Length=227
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 47/55 (85%), Gaps = 0/55 (0%)
Query 1 SYEYTDYEDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
+YEYTDY L F+SY++P L+PG+LRLL+VDNRVVLPIE IRM+++S+DVLH
Sbjct 107 TYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLH 161
> Hs22053514
Length=98
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%), Gaps = 0/40 (0%)
Query 5 TDYEDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITI 44
+DYEDL FDSYIIPT++LKPGELRLL+VDNRV+LPIEI I
Sbjct 57 SDYEDLGFDSYIIPTTDLKPGELRLLKVDNRVILPIEIPI 96
> DmMi004
Length=228
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 0/55 (0%)
Query 1 SYEYTDYEDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
SYEY+D+ ++ FDSY+IPT+EL RLL+VDNRVVLP+ IR+LV++ DV+H
Sbjct 107 SYEYSDFNNIEFDSYMIPTNELMTDGFRLLDVDNRVVLPMNSQIRILVTAADVIH 161
> AtMi014
Length=260
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query 1 SYEYTDY-----EDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
+YEY+DY + L+FDSY+IP +L+ G+ RLLEVDNRVV+P + +R++V+S DV H
Sbjct 128 TYEYSDYNSSDEQSLTFDSYMIPEEDLELGQSRLLEVDNRVVVPAKTHLRIIVTSADVPH 187
> CEMi003
Length=231
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 0/55 (0%)
Query 1 SYEYTDYEDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
SYEY+D L FDSY+ +L GE RLLEVDNR V+P + IR ++S DV+H
Sbjct 110 SYEYSDIPGLEFDSYMKSLDQLSLGEPRLLEVDNRCVIPCDTNIRFCITSADVIH 164
> SPMi010
Length=248
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query 1 SYEYTDY-----EDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
SYE D+ E +SFDSY++P +L+ G LR LEVDNR+VLPI+ IR++++S DV+H
Sbjct 123 SYELNDFVTNENEPVSFDSYMVPEEDLEEGSLRQLEVDNRLVLPIDTRIRLILTSGDVIH 182
> Hs20541261
Length=164
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%), Gaps = 0/36 (0%)
Query 2 YEYTDYEDLSFDSYIIPTSELKPGELRLLEVDNRVV 37
YEYTDYED+SFDSY+ PT++LKPGELRLLE VV
Sbjct 109 YEYTDYEDVSFDSYMTPTTDLKPGELRLLEAGLPVV 144
> YMi025
Length=251
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query 1 SYEYTDY-----EDLSFDSYIIPTSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVLH 55
YEY+D+ E + F+SY+IP L+ G+LRLL+ D +V+P++ IR +V++ DV+H
Sbjct 127 KYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIH 186
> Hs17482743
Length=194
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 31/36 (86%), Gaps = 0/36 (0%)
Query 19 TSELKPGELRLLEVDNRVVLPIEITIRMLVSSEDVL 54
TS+LKPGEL+LLE DN+V P+E +I++L SS+D+L
Sbjct 53 TSDLKPGELQLLEFDNQVAFPVETSIQILSSSKDIL 88
> Hs22045066
Length=300
Score = 42.7 bits (99), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/27 (70%), Positives = 25/27 (92%), Gaps = 1/27 (3%)
Query 5 TDYEDLSFDSYIIPTSELKPGELRLLE 31
++YE+L FDSY+IPT++LKP ELRLLE
Sbjct 204 SNYEELGFDSYMIPTADLKP-ELRLLE 229
Lambda K H
0.317 0.139 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1197145602
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40