bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0718_orf1
Length=75
Score E
Sequences producing significant alignments: (Bits) Value
At1g27350 79.0 2e-15
At1g27330 79.0 2e-15
Hs7657552 45.8 2e-05
CE11548 43.9 6e-05
CE18803 29.6 1.4
At5g60270 27.7 6.0
> At1g27350
Length=68
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 0/65 (0%)
Query 7 MAGTNRKYSKKIEAFDRSITKRGHAPESRHKKGKGYPVGPIVLGVFLFVVVGSAIIQIIS 66
M + R +KIE FD++I KRG PE+ KKGK YPVGPI+LG F+FVV+GS++ QII
Sbjct 1 MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60
Query 67 SAQRG 71
+A G
Sbjct 61 TATSG 65
> At1g27330
Length=68
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 0/65 (0%)
Query 7 MAGTNRKYSKKIEAFDRSITKRGHAPESRHKKGKGYPVGPIVLGVFLFVVVGSAIIQIIS 66
M + R +KIE FD++I KRG PE+ KKGK YPVGPI+LG F+FVV+GS++ QII
Sbjct 1 MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60
Query 67 SAQRG 71
+A G
Sbjct 61 TATSG 65
> Hs7657552
Length=66
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query 19 EAFDRSITKRGH-APESRHKKGKGYPVGPIVLGVFLFVVVGSAIIQIISSAQRG 71
E ++IT+RG+ A SR+ + VGP +L +F+FVV GSAI QII S + G
Sbjct 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
> CE11548
Length=65
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 0/51 (0%)
Query 21 FDRSITKRGHAPESRHKKGKGYPVGPIVLGVFLFVVVGSAIIQIISSAQRG 71
F +++ RG+ +S YP P ++G+F+FVV GSA+ +II + G
Sbjct 14 FSKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKMG 64
> CE18803
Length=646
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 0/36 (0%)
Query 9 GTNRKYSKKIEAFDRSITKRGHAPESRHKKGKGYPV 44
G NRK K+I+ D S H+ +RH + + Y V
Sbjct 594 GANRKTKKEIKKLDNSTIVEYHSESNRHLRRQNYQV 629
> At5g60270
Length=668
Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 25 ITKRGHAPESRHKKGKGYPVGPIVLGVFLFVVVGSAII 62
I+K P S KK PV ++LG+ F+V+G ++
Sbjct 267 ISKLPKVPHSSTKKKSTSPVLSVLLGLIAFIVLGILVV 304
Lambda K H
0.321 0.138 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181410888
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40