bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_0764_orf3 Length=153 Score E Sequences producing significant alignments: (Bits) Value 7303152 35.0 0.049 SPAC222.14c 32.7 0.26 At3g55160 32.3 0.33 7297939 30.4 1.4 At1g72960 30.4 1.5 YOR165w 29.3 2.7 Hs18597328 28.9 3.5 YKR105c 28.9 3.7 7295029 28.9 4.4 Hs18579281 28.1 6.5 Hs7706547 28.1 7.0 7303045_2 28.1 7.0 > 7303152 Length=762 Score = 35.0 bits (79), Expect = 0.049, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query 56 SWRSVPLWGWLLLICLGWNEIGMV-----VSFATSNWLILPLLLLGLLLGVAVLVSGQMG 110 S+R + G + ++CLG IG V +S+ T+ W++LP L+ + AV + Sbjct 561 SFRLITQIGHVKVLCLGL--IGNVLRFLYISYLTNPWMVLPFELMQGITHAAVWAASCSY 618 Query 111 IATHSAKHLTQLVRLLLQPFLYGL 134 IA ++ KHL + +LQ +GL Sbjct 619 IAHNTPKHLRASAQGVLQGIHHGL 642 > SPAC222.14c Length=762 Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 16/102 (15%) Query 9 EQPMPAAFYRPLIDSISEQAIQRRAVASMQQQC-REAQLLQQRCGSGA--SWRSVPLWGW 65 E PA+F+ L RR V+ + R A L+ C + +P + W Sbjct 613 EYTSPASFFTIL---------NRRRVSDISVNFKRSADLIFMDCKRSVINTTTRIPPYFW 663 Query 66 LLLICLGWNEIGMVVSFATSNWLILPLLLLGLLLGVAVLVSG 107 +LLI LGWNE ++ N + +L+ G + + +SG Sbjct 664 VLLIVLGWNEFMAIL----RNPFVFMILMFGGTVVYGLYISG 701 > At3g55160 Length=2149 Score = 32.3 bits (72), Expect = 0.33, Method: Composition-based stats. Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 0/21 (0%) Query 126 LLQPFLYGLLKRATDLMDPSG 146 LL PF+Y LK ATDL+D SG Sbjct 1323 LLHPFIYSELKAATDLLDTSG 1343 > 7297939 Length=897 Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 9/59 (15%) Query 95 LGLLLGVAVLVSGQMGIATHSAKH---------LTQLVRLLLQPFLYGLLKRATDLMDP 144 L+ G+ L Q+G+ KH + ++R++L F Y L+++A ++ P Sbjct 689 FSLMFGIVFLAYAQLGLLLFGTKHPDFRNFITSILTMIRMILGDFQYNLIEQANRVLGP 747 > At1g72960 Length=748 Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query 5 ATSEEQPMPAAFYRPLIDSISEQAIQRRAVASMQQQCREAQLLQQRCGSGASWRSVPLWG 64 A+S +P++ R LI + ++I R+ + +A Q+ G +W P W Sbjct 584 ASSTWDEVPSS--RTLITPVQCKSIWRQFKTETEYTVTQAISAQEANRRGNNWLPPP-WA 640 Query 65 WLLLICLGWNEIGMVVSFATSNWLILPLLLLGLLLGVAV 103 L LI LG+NE ++ N L L ++ + LL A+ Sbjct 641 ILALIVLGFNEFMTLL----RNPLYLGVMFVAFLLAKAL 675 > YOR165w Length=776 Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 9/53 (16%) Query 60 VPLWGWLLLICLGWNEIGMVVSFATSNWLILPLLL-LGLLLGVAVLVSGQMGI 111 +P W ++LL LGWNE V+ PL + L L+LG V + G+ Sbjct 682 IPPWIYVLLAVLGWNEFVAVIRN--------PLFVTLTLILGATFFVIHKFGL 726 > Hs18597328 Length=647 Score = 28.9 bits (63), Expect = 3.5, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query 1 AQAHATSEEQPMPAAFYRPLIDSISEQAIQRRAVASMQQQ 40 A+ H QP+PA Y PL I E++ RR A +Q++ Sbjct 210 AECHRQFRAQPVPAHVYLPLYQEIMERSEARRQ-AGIQKR 248 > YKR105c Length=582 Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query 88 LILPLLLLGLLLGVAVLVSGQMGIATHSAKHLTQLVRLLLQPFLYGLLKRAT 139 L+ PLL+ G +LGV + +G M + T+++ TQ+ LLL F G +A+ Sbjct 399 LVKPLLIFGGVLGV--IGAGLMTLMTNTSTKSTQIGVLLLPGFSLGFALQAS 448 > 7295029 Length=1274 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 7/50 (14%) Query 88 LILPLLLLGLLLGVAVLVSGQMGIATHSAKHLTQLVRLLLQPFLYGLLKR 137 +++P+LL+ LL+G+AV G + S + QL RL +Q L+ L+R Sbjct 1069 ILMPILLMNLLIGLAV---GDI----ESVRRNAQLKRLAMQVVLHTELER 1111 > Hs18579281 Length=733 Score = 28.1 bits (61), Expect = 6.5, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 0/36 (0%) Query 60 VPLWGWLLLICLGWNEIGMVVSFATSNWLILPLLLL 95 VP G+ +L+ GW +I F +W+ L +++L Sbjct 199 VPSMGFCILVAHGWQKISTKSVFKKLSWICLSMVIL 234 > Hs7706547 Length=704 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 0/46 (0%) Query 87 WLILPLLLLGLLLGVAVLVSGQMGIATHSAKHLTQLVRLLLQPFLY 132 +L+ P L++ LL VAVLV G+ T S + + L ++ + F Y Sbjct 224 YLLQPQLIVRRLLDVAVLVPGRPSEQTLSPHNRSALYKVFVPSFTY 269 > 7303045_2 Length=1053 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 6/33 (18%) Query 119 LTQLVRLL------LQPFLYGLLKRATDLMDPS 145 L QLVR + ++PFLY +++ +TDL PS Sbjct 655 LEQLVRTIRDVPEPMKPFLYSVIELSTDLQQPS 687 Lambda K H 0.324 0.136 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1961355924 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40