bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1311_orf1 Length=107 Score E Sequences producing significant alignments: (Bits) Value At3g56440 49.3 2e-06 At2g40810 48.5 3e-06 7299116 42.4 2e-04 At3g62770 41.2 5e-04 YGR223c 38.5 0.003 Hs5901988 35.4 0.025 YFR021w 34.7 0.048 At5g05150 33.1 0.13 At1g48630 31.2 0.43 Hs14042960 30.4 0.72 Hs6981364 30.4 0.75 Hs20561564 30.4 0.75 Hs5031817 29.6 1.4 SPAC458.06 28.1 3.6 At3g45650 27.3 6.3 At3g25970 27.3 6.3 YHR131c 27.3 7.2 At5g23430 27.3 7.5 At1g11160 26.9 9.1 > At3g56440 Length=400 Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 0/50 (0%) Query 49 TLGSVGIGNSASVYLESMAFNQDGSCFIAGTSEGFRVYTSSPLTEFVRRE 98 + G G S L S+++NQD SCF AGTS GFR+Y P E RRE Sbjct 22 SFGPPDFGESDEAELVSVSWNQDYSCFAAGTSHGFRIYNCEPFKETFRRE 71 > At2g40810 Length=369 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 0/36 (0%) Query 63 LESMAFNQDGSCFIAGTSEGFRVYTSSPLTEFVRRE 98 L S+ +NQD SCF AGTS GFR+Y P E RRE Sbjct 8 LVSVCWNQDSSCFAAGTSHGFRIYNCEPFKETFRRE 43 > 7299116 Length=340 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Query 67 AFNQDGSCFIAGTSEGFRVYTSSPLTEFVRREGPWWPDRGV 107 AFNQD CF T GFRVY PL E +E ++P+ G+ Sbjct 17 AFNQDQGCFACATDTGFRVYNCDPLKE---KERQYFPEGGL 54 > At3g62770 Length=432 Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 0/33 (0%) Query 66 MAFNQDGSCFIAGTSEGFRVYTSSPLTEFVRRE 98 ++FNQD +CF GT GFR+ P E RR+ Sbjct 81 LSFNQDHACFAVGTDRGFRILNCDPFREIFRRD 113 > YGR223c Length=448 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 0/28 (0%) Query 65 SMAFNQDGSCFIAGTSEGFRVYTSSPLT 92 S++FNQD SCF GFR++ + PLT Sbjct 21 SVSFNQDDSCFSVALENGFRIFNTDPLT 48 > Hs5901988 Length=360 Score = 35.4 bits (80), Expect = 0.025, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 0/29 (0%) Query 65 SMAFNQDGSCFIAGTSEGFRVYTSSPLTE 93 S+ FNQD SCF G R+Y PL E Sbjct 11 SLRFNQDQSCFCCAMETGVRIYNVEPLME 39 > YFR021w Length=500 Score = 34.7 bits (78), Expect = 0.048, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 0/27 (0%) Query 68 FNQDGSCFIAGTSEGFRVYTSSPLTEF 94 FNQ G+C GTS+GF+++ P +F Sbjct 13 FNQTGTCISLGTSKGFKIFNCEPFGKF 39 > At5g05150 Length=374 Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 0/29 (0%) Query 65 SMAFNQDGSCFIAGTSEGFRVYTSSPLTE 93 S+A+NQ S FI GT+ GF VY+ P+ + Sbjct 35 SVAWNQVCSGFIVGTNHGFNVYSCKPMIK 63 > At1g48630 Length=326 Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query 44 AEAADTLGSVGIGNSASV-YLESMAFNQDGSCFIAGTSEG-FRVY 86 AEA T GS GIGN V Y S+ ++ DG+ +G ++G RV+ Sbjct 277 AEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321 > Hs14042960 Length=891 Score = 30.4 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 16/79 (20%) Query 23 RGDARTDKAEGT--GSGDLSAGAAEAADTLGSVGIGNSASVY--------------LESM 66 RGD T + +G G+GDLSA AE + T+ G +S Y L Sbjct 7 RGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFEDSSYYKCDTDDTFEAREEILGDE 66 Query 67 AFNQDGSCFIAGTSEGFRV 85 AF+ S ++G S F V Sbjct 67 AFDTANSSIVSGESIRFFV 85 > Hs6981364 Length=806 Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query 29 DKAEGTGSGDL-SAGAAEAADTLGSVGIGNSASV-YLESMAFNQDGSCFIAGTSEGFRVY 86 +KA G + DL A + + ++ I +S S+ Y+ M F F G R Y Sbjct 501 EKASGVATKDLFDWVAGTSTGGILALAILHSKSMAYMRGMYFRMKDEVF-----RGSRPY 555 Query 87 TSSPLTEFVRRE 98 S PL EF++RE Sbjct 556 ESGPLEEFLKRE 567 > Hs20561564 Length=806 Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query 29 DKAEGTGSGDL-SAGAAEAADTLGSVGIGNSASV-YLESMAFNQDGSCFIAGTSEGFRVY 86 +KA G + DL A + + ++ I +S S+ Y+ M F F G R Y Sbjct 501 EKASGVATKDLFDWVAGTSTGGILALAILHSKSMAYMRGMYFRMKDEVF-----RGSRPY 555 Query 87 TSSPLTEFVRRE 98 S PL EF++RE Sbjct 556 ESGPLEEFLKRE 567 > Hs5031817 Length=655 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 0/24 (0%) Query 63 LESMAFNQDGSCFIAGTSEGFRVY 86 + S+ FN DG C +G + RVY Sbjct 234 VRSVLFNPDGCCLYSGCQDSLRVY 257 > SPAC458.06 Length=364 Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 0/36 (0%) Query 63 LESMAFNQDGSCFIAGTSEGFRVYTSSPLTEFVRRE 98 + +++ NQD SC G++++ +PL +R+ Sbjct 4 INTVSLNQDASCMSVALDTGYKIFQINPLKLRAQRQ 39 > At3g45650 Length=558 Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 0/49 (0%) Query 56 GNSASVYLESMAFNQDGSCFIAGTSEGFRVYTSSPLTEFVRREGPWWPD 104 GN A Y E + + I G YTS+ L + ++R W PD Sbjct 460 GNVALCYQEFPESMRSTATSITSVVIGICFYTSTALIDLIQRTTAWLPD 508 > At3g25970 Length=646 Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 0/28 (0%) Query 44 AEAADTLGSVGIGNSASVYLESMAFNQD 71 A A D LG G+ N A +ESM N D Sbjct 495 AAAVDLLGRAGLVNKAKELIESMPLNPD 522 > YHR131c Length=840 Score = 27.3 bits (59), Expect = 7.2, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 0/41 (0%) Query 2 DIVQLSRQLLVTGMENWPQDDRGDARTDKAEGTGSGDLSAG 42 D+ Q SR L +T + DD TD+ E G D AG Sbjct 599 DLSQSSRSLCLTNRDAEINDDESATETDEDENDGETDEYAG 639 > At5g23430 Length=922 Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 0/44 (0%) Query 48 DTLGSVGIGNSASVYLESMAFNQDGSCFIAGTSEGFRVYTSSPL 91 +T +G G + + ++FN DG + G E ++++ P+ Sbjct 215 ETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPI 258 > At1g11160 Length=974 Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 0/44 (0%) Query 48 DTLGSVGIGNSASVYLESMAFNQDGSCFIAGTSEGFRVYTSSPL 91 +T +G + + ++AF+ DG G +G +VY+ P+ Sbjct 163 ETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPV 206 Lambda K H 0.313 0.132 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1164169380 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40