bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1418_orf1 Length=213 Score E Sequences producing significant alignments: (Bits) Value Hs7661580 38.9 0.007 Hs8922208 38.5 0.010 Hs7706294 38.1 0.012 CE10268 35.0 0.13 7295146 32.7 0.62 7291031 32.3 0.77 At5g06150 28.9 7.7 > Hs7661580 Length=454 Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 25/33 (75%), Gaps = 0/33 (0%) Query 4 HEAPLRSIAFSASASLVAAISSKGSVVRILSVP 36 H++PL ++AF AS + +A S KG+V+R+ S+P Sbjct 201 HDSPLAALAFDASGTKLATASEKGTVIRVFSIP 233 > Hs8922208 Length=441 Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 3/38 (7%) Query 2 CT---HEAPLRSIAFSASASLVAAISSKGSVVRILSVP 36 CT HE L +I F+AS S +A+ S KG+V+R+ SVP Sbjct 175 CTIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVP 212 > Hs7706294 Length=438 Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 25/33 (75%), Gaps = 0/33 (0%) Query 4 HEAPLRSIAFSASASLVAAISSKGSVVRILSVP 36 H++PL ++AF AS + +A S KG+V+R+ S+P Sbjct 196 HDSPLAALAFDASGTKLATASEKGTVIRVFSIP 228 > CE10268 Length=412 Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 0/41 (0%) Query 4 HEAPLRSIAFSASASLVAAISSKGSVVRILSVPSLELLLSL 44 HE + + F+ +++A S+KG+V+R+ SVP+ L Sbjct 187 HEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEF 227 > 7295146 Length=442 Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 0/31 (0%) Query 4 HEAPLRSIAFSASASLVAAISSKGSVVRILS 34 H+ PL ++AFS S + +A S +G+V+R+ S Sbjct 182 HDTPLAALAFSPSGTEIATASERGTVIRVFS 212 > 7291031 Length=738 Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 4/136 (2%) Query 59 LSMHAADPRSSSSSSTSQSAQAPTAAGASQL--PSKRKEQRKKAEMLEEADAEAVLISGA 116 L D +SSS ++ + + P GA ++ P++ + K+ + + A IS Sbjct 182 LEQEPTDLKSSSPAAVAGKIELPKDEGAPKVDAPAQNVDAVKEESVPKPEVAANQNISDK 241 Query 117 TEAPAGAPPQQPQQTKQAKGKKQKQKKGGCVGSTTQNSSEGTAGVAPDIVESAATPTASA 176 E P PP + ++A +QKQ++ T + E T + E A Sbjct 242 QELPP--PPNAAPKVEEAVKSEQKQEEAPAEKDETPSKKEETPAKQVSVEEPKVAAPPLA 299 Query 177 VGVSASPASFGPVAID 192 V A+ S +D Sbjct 300 VNSPAAAPSLDDTEVD 315 > At5g06150 Length=445 Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query 85 GASQLPSKRKEQRK-KAEMLEEADAEAVLISGATEAPAGAPPQQPQQTKQAKGKKQKQKK 143 G +Q P R R +A++L A E I+G + PA P +QP + + ++ QKK Sbjct 50 GKAQPPINRPITRSFRAQLLANAQLERKPINGDNKVPALGPKRQPLAARNPEAQRAVQKK 109 Query 144 GGCVGSTTQ 152 V T+ Sbjct 110 NLVVKQQTK 118 Lambda K H 0.306 0.119 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3897491854 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40