bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1470_orf1
Length=147
Score E
Sequences producing significant alignments: (Bits) Value
At1g16700 36.6 0.017
At1g79010 35.8 0.034
7300064 34.7 0.062
Hs4505371 34.3 0.088
CE00832 33.1 0.18
CE02456 31.6 0.63
CE17243 27.3 9.8
> At1g16700
Length=222
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query 19 ENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVR-LRRTCH-----KATIHIPFQSQPKK 72
++E+AE++ ++S ++ S N+ + + VR L T K TI+ PF+ P
Sbjct 45 DDEEAEQLAKEISKDWSTVFERSMNTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLS 104
Query 73 ESARGRSSSKQTPSPQESSSNNKSCNSASPRAAV 106
RG + ++ P+ +E K C + P A+
Sbjct 105 PRFRGEHALRRYPTGEERCIACKLCEAVCPAQAI 138
> At1g79010
Length=222
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query 19 ENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVR-LRRTCH-----KATIHIPFQSQPKK 72
++E+AE+++ ++S + S N+ + + VR L T K TI+ PF+ P
Sbjct 45 DDEEAEQLSKEISKDWNTVFERSINTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLS 104
Query 73 ESARGRSSSKQTPSPQESSSNNKSCNSASPRAAV 106
RG + ++ P+ +E K C + P A+
Sbjct 105 PRFRGEHALRRYPTGEERCIACKLCEAVCPAQAI 138
> 7300064
Length=217
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 0/62 (0%)
Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119
ATI+ PF+ P RG + ++ PS +E K C + P A+ E A+ RR
Sbjct 87 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERADGSRR 146
Query 120 SS 121
++
Sbjct 147 TT 148
> Hs4505371
Length=210
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 0/62 (0%)
Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119
ATI+ PF+ P RG + ++ PS +E K C + P A+ E A+ RR
Sbjct 80 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 139
Query 120 SS 121
++
Sbjct 140 TT 141
> CE00832
Length=212
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 0/62 (0%)
Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119
ATI+ PF+ P RG + ++ PS +E K C + P A+ E+ + RR
Sbjct 82 ATINYPFEKGPLSSRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAETRPDGSRR 141
Query 120 SS 121
++
Sbjct 142 TT 143
> CE02456
Length=479
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 0/50 (0%)
Query 10 DDLKDSNRTENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVRLRRTCHK 59
D L DS R+E +K EK+ + + G + NSF S +R+ C K
Sbjct 77 DALIDSLRSEIDKLEKINKEFANGSVIPEHDDSNSFGESEMLRISEDCQK 126
> CE17243
Length=553
Score = 27.3 bits (59), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query 8 EGDDLKDSNRTENEKAEKVTDKLSFG---DASSSNSSGNSFYSSRAVRLR 54
E D+ KDSN E+E E T +L G D S N +YS +R+R
Sbjct 443 EDDEEKDSNSDEDEDEESTTVELVEGETPDPSEQNFLQRIYYSPDYLRVR 492
Lambda K H
0.299 0.113 0.295
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1785281974
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40