bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1869_orf1
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
At1g29320 42.0 7e-04
7302188 37.4 0.018
Hs8922422 35.4 0.076
CE13313 33.9 0.22
At1g36070 33.5 0.29
YGL111w 32.0 0.73
YBR108w 30.0 3.2
At4g13530 29.6 3.4
7294394 28.5 9.3
> At1g29320
Length=468
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 0/53 (0%)
Query 57 GAIVGLGLDPAGEFLVAVGLGRYAYVFDAKSRKLREKVFLKQKLTCLLSGGGV 109
G+I + P + + + GL RY V+D K+R+L VFLKQ LT L+ G
Sbjct 303 GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGF 355
> 7302188
Length=419
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 0/69 (0%)
Query 36 AAACSDLQLAAVSVGGYKEAMGAIVGLGLDPAGEFLVAVGLGRYAYVFDAKSRKLREKVF 95
A D + V YK G I L LD G FL + L RY + D+++ L + +
Sbjct 260 ALKAFDTRRMKTHVHTYKGFTGGISDLHLDATGRFLSSASLDRYVRIHDSETTVLLYQCY 319
Query 96 LKQKLTCLL 104
+K K T +L
Sbjct 320 VKSKATKIL 328
> Hs8922422
Length=385
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query 49 VGGYKEAMGAIVGLGLDPAGEFLVAVGLGRYAYVFDAKS-RKLREKVFLKQKLTCLLSGG 107
+G K G++ GL P+ L + GL R + ++ R L KV+LK +L CLL G
Sbjct 262 LGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHGTQNPRGLEHKVYLKSQLNCLLLSG 321
> CE13313
Length=431
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 0/53 (0%)
Query 52 YKEAMGAIVGLGLDPAGEFLVAVGLGRYAYVFDAKSRKLREKVFLKQKLTCLL 104
+K G+I + P +VG+ R+ V D +SRKL K++ K +L +L
Sbjct 251 FKGQAGSIRSITAHPTLPLAASVGIDRFLRVHDLQSRKLIHKIYCKTRLNRVL 303
> At1g36070
Length=451
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 0/59 (0%)
Query 35 SAAACSDLQLAAVSVGGYKEAMGAIVGLGLDPAGEFLVAVGLGRYAYVFDAKSRKLREK 93
+A D++ + S K MGAI GL P G FL + ++FD +S L+ +
Sbjct 345 TACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQ 403
> YGL111w
Length=463
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 0/37 (0%)
Query 68 GEFLVAVGLGRYAYVFDAKSRKLREKVFLKQKLTCLL 104
G++L+ GL RY +FD K+ K+ KV++ ++ ++
Sbjct 372 GKYLLQGGLDRYVRIFDIKTNKMLVKVYVGSRINFIV 408
> YBR108w
Length=848
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query 103 LLSGGGVGAGGVKRCTATKGSAHTKHECGSSSDLNSSGEEQGSECDNSIDSEAATDDETE 162
L S G G G K T A KH S + E+ S NS D E ++DE E
Sbjct 15 LKSAGKYGYQGTKYVAKTGYKASKKHYNNSKAR-----RERKSGKKNSSDEEYDSEDEME 69
Query 163 ISRRPVE 169
R+P +
Sbjct 70 YERKPTD 76
> At4g13530
Length=263
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
Query 64 LDPAGEFLVAVGLGRYAYVFDAKSRKLREKVFLKQKLTCLL 104
L A F+ V LGR Y K+R L+ KV L K+T L+
Sbjct 194 LSMAAAFVGFVMLGRRLYNMKKKTRSLQLKVLLDDKVTSLV 234
> 7294394
Length=1037
Score = 28.5 bits (62), Expect = 9.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 0/42 (0%)
Query 130 CGSSSDLNSSGEEQGSECDNSIDSEAATDDETEISRRPVEAA 171
CGSS+ N+ QGS ++I+S A+ + + + RR + A
Sbjct 838 CGSSNPPNAQNASQGSANGSTINSNASAMEASMLKRRLIAAG 879
Lambda K H
0.312 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3166472848
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40