bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1942_orf1
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
At1g22450 42.0 3e-04
SPCC1442.08c 37.7 0.005
At4g28060 37.0 0.008
YLR038c 36.2 0.014
7293644 34.3 0.060
Hs4502985 32.0 0.29
At3g18030 28.5 3.2
SPBC17F3.01c 28.5 3.3
Hs22060743 28.5 3.5
At1g48610 28.1 3.8
CE22939 27.3 6.7
> At1g22450
Length=191
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query 42 DPRLLQANQGSACALRYTMFCRCARELGEENPRCK--YQYYRAQIACTAEQMDDWNEHRS 99
D R NQ C RY + RC G++ P C ++YR+ C +E +D WNE R
Sbjct 125 DFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRS--LCPSEWVDRWNEQRE 182
Query 100 RGT 102
GT
Sbjct 183 NGT 185
> SPCC1442.08c
Length=83
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 0/59 (0%)
Query 44 RLLQANQGSACALRYTMFCRCARELGEENPRCKYQYYRAQIACTAEQMDDWNEHRSRGT 102
R NQ C Y + RC + GE+ CK ++ Q C E ++ W+E R GT
Sbjct 20 RFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGT 78
> At4g28060
Length=164
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query 42 DPRLLQANQGSACALRYTMFCR------CARELGEENPRCK--YQYYRAQIACTAEQMDD 93
D R NQ C RY F R C GE+ C+ +YYRA C E +D
Sbjct 93 DFRFPTTNQTRHCFTRYIEFHRYSCVIECTTAKGEDANECERFAKYYRA--LCPGEWVDK 150
Query 94 WNEHRSRGT 102
WNE R GT
Sbjct 151 WNEQRETGT 159
> YLR038c
Length=83
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 0/66 (0%)
Query 42 DPRLLQANQGSACALRYTMFCRCARELGEENPRCKYQYYRAQIACTAEQMDDWNEHRSRG 101
D R Q NQ C Y + +C GE+ CK + C + ++ W++ R +G
Sbjct 15 DARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKG 74
Query 102 TCMFDI 107
DI
Sbjct 75 IFAGDI 80
> 7293644
Length=92
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 0/61 (0%)
Query 42 DPRLLQANQGSACALRYTMFCRCARELGEENPRCKYQYYRAQIACTAEQMDDWNEHRSRG 101
DPR N C Y F RC ++ GE+ C Y + C ++ W++ R G
Sbjct 27 DPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRESG 86
Query 102 T 102
T
Sbjct 87 T 87
> Hs4502985
Length=86
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query 42 DPRLLQANQGSACALRYTMFCRCAREL---GEENPRCKYQYYRAQIACTAEQMDDWNEHR 98
D R NQ C Y F RC + + G + C++ Q C + DW+E R
Sbjct 18 DSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQR 77
Query 99 SRGT 102
+ GT
Sbjct 78 AEGT 81
> At3g18030
Length=209
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 0/28 (0%)
Query 43 PRLLQANQGSACALRYTMFCRCARELGE 70
PR+L A GS A+++ C C E E
Sbjct 20 PRVLLAASGSVAAIKFGNLCHCFTEWAE 47
> SPBC17F3.01c
Length=327
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
Query 9 RHPHCVLKMTKQEMVQMYQRNIEELTAQN 37
R P + +T E V+MY+R I+EL N
Sbjct 150 REPMTIPNLTDNERVEMYRRRIDELPIPN 178
> Hs22060743
Length=2012
Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query 13 CVLKMTKQEMVQMYQRNIEELTAQNPHAEDPRLLQANQGSACAL-RYTMFCRCA 65
C+L T+ + QM +EE A NP D + Q +C+ R+ + RCA
Sbjct 186 CILNRTQSKRSQMSTPTLEEEPASNPATWD--FVDPTQRVSCSCSRHKLLKRCA 237
> At1g48610
Length=389
Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 0/28 (0%)
Query 43 PRLLQANQGSACALRYTMFCRCARELGE 70
PR+L A GS +++++ C C E E
Sbjct 200 PRILLAASGSVASIKFSNLCHCFSEWAE 227
> CE22939
Length=121
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 0/60 (0%)
Query 42 DPRLLQANQGSACALRYTMFCRCARELGEENPRCKYQYYRAQIACTAEQMDDWNEHRSRG 101
D R Q + C Y F RC +G++ CK+ + C + W+E S G
Sbjct 54 DARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEG 113
Lambda K H
0.323 0.132 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1167969826
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40