bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_2230_orf1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
At4g25730 40.8 0.001
YCL054w 39.3 0.004
Hs17017991 38.9 0.006
7293173 35.4 0.070
SPAC1687.11 34.7 0.12
CE23795 33.9 0.19
CE23796 33.5 0.22
YML072c 30.0 2.4
> At4g25730
Length=821
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query 49 SETGLSPEAYTELILK-NKLTTKEIKELWEDLKVLNKKDLRTLLLWRWKVKRQI 101
+ T +S + L LK + LTT+EIK L +DL VL K D + +L WR ++++ +
Sbjct 272 TTTSISFDDQASLPLKEHDLTTEEIKILCDDLPVLGKNDFKHILKWRMQIRKAL 325
> YCL054w
Length=841
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 26/120 (21%)
Query 62 ILKN-KLTTKEIKELWEDLKVLNKKDLRTLLLWRWKVKRQIEATLRSSSSSSSSSGSGDG 120
ILK K TT E + EDLKVL KKD + +L WR K+ R+I
Sbjct 289 ILKKLKQTTDEFRSCIEDLKVLGKKDFKMILRWR-KIAREIL------------------ 329
Query 121 SGEAVDGVEGRETAAAAAAAAAAAEDENEQADAELLHCMHRVSKLRRQQRKQQRQQQQQQ 180
G+E ++ A E+E + D + L R++ R ++RK + +Q++ Q
Sbjct 330 ------GIEVKDDAKTEIEVVPLTEEEQIEKDLQGLQEKQRLNVKRERRRKNEMKQKELQ 383
> Hs17017991
Length=847
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%), Gaps = 0/39 (0%)
Query 68 TTKEIKELWEDLKVLNKKDLRTLLLWRWKVKRQIEATLR 106
TT++I+ +D++VL +K+LR+LL WR K++R + L+
Sbjct 286 TTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLK 324
> 7293173
Length=817
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query 62 ILKNKLTTKEIKELWEDLKVLNKKDLRTLLLWRWKVKRQI 101
I +K TT EI E +DLKVL +KD++ L+ W WK R++
Sbjct 283 IANHKKTTPEILECCKDLKVLGRKDIKGLVQW-WKDVREL 321
> SPAC1687.11
Length=802
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 0/35 (0%)
Query 67 LTTKEIKELWEDLKVLNKKDLRTLLLWRWKVKRQI 101
+TT+EI DL+VL KK+ R +L WR K++ ++
Sbjct 294 VTTEEILLCCSDLQVLGKKEFRDILRWRLKIRDEM 328
> CE23795
Length=833
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
Query 68 TTKEIKELWEDLKVLNKKDLRTLLLWR 94
TT+E+ E D+KVL ++LR LL WR
Sbjct 291 TTEEVIEYMNDVKVLGPRELRVLLRWR 317
> CE23796
Length=719
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
Query 68 TTKEIKELWEDLKVLNKKDLRTLLLWR 94
TT+E+ E D+KVL ++LR LL WR
Sbjct 291 TTEEVIEYMNDVKVLGPRELRVLLRWR 317
> YML072c
Length=1545
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 0/25 (0%)
Query 23 KEDKSEKEAAAAAAAAAKGEKQQQN 47
KEDKSE++A A A AKG+K+ +N
Sbjct 619 KEDKSEEKAVERAEAKAKGKKEDEN 643
Lambda K H
0.300 0.115 0.293
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2806646388
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40