bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_2718_orf2 Length=198 Score E Sequences producing significant alignments: (Bits) Value At5g57120 58.2 1e-08 7296502 52.4 6e-07 YKR092c 50.8 2e-06 SPBC1711.05 48.5 8e-06 Hs4758860_3 47.4 2e-05 CE08376 33.9 0.23 7301144 33.5 0.28 7296239 29.3 6.1 > At5g57120 Length=330 Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 27/146 (18%) Query 54 KKKARAIPENENSEAEATQAAPETDSSCSKQNGKTSEKKAKSEEETAAQEEPQDSQRGGK 113 +KK + EN+ E Q P ++ +K+NG + + KS +Q+ GK Sbjct 199 RKKEENVVEND----EGVQETPVKETE-TKENGNAEKSETKS-----------TNQKSGK 242 Query 114 GAAGFKR----FQRIDDTRWISALPAELKDNSFWKKKN--DSFAAKAAEQLGRVRGKDFR 167 G + K FQR++ + + NS++ K + KA E LG+VRG+DFR Sbjct 243 GLSNSKEPKKPFQRVN----VDEIVYTENSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFR 298 Query 168 HEKSKKKRATWKGCGEIPMTVNSIQF 193 HEK+KKKR +++G G I +S +F Sbjct 299 HEKTKKKRGSYRG-GLIDQESHSTKF 323 > 7296502 Length=654 Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%) Query 111 GGKGAAGFKRFQRIDDTRWISALPAELKDNSFWKKKN--DSFAAKAAEQLGRVRGKDFRH 168 GG G R R +D + + ++D SF KKN S+ +A + L RGK F+H Sbjct 574 GGSGRRSPFRRVRTEDV----VVDSRVQDMSFEAKKNAAGSWGERANKDLKHTRGKSFKH 629 Query 169 EKSKKKRATWKGCGEIPMTVNSIQF 193 EK+KKKR +++G G+I + VNSI+F Sbjct 630 EKTKKKRGSYRG-GQIDVGVNSIKF 653 > YKR092c Length=406 Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Query 119 KRFQRIDDTRWISALPAELKDNSFWKKKNDSFAAKAAEQLGRVRGKDFRHEKSKKKRATW 178 K F R+D ++ I+ EL DN++ K ++ KA E+LGRVRGKDF K+K KR ++ Sbjct 333 KHFSRVDRSK-INFEAWELTDNTY-KGAAGTWGEKANEKLGRVRGKDFTKNKNKMKRGSY 390 Query 179 KGCGEIPMTVNSIQF 193 +G G I + S +F Sbjct 391 RG-GSITLESGSYKF 404 > SPBC1711.05 Length=451 Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 5/74 (6%) Query 121 FQRIDD-TRWISALPAELKDNSFWKKKNDSFAAKAAEQLGRVRGKDFRHEKSKKKRATWK 179 F R+ D ++W A PA L+DNSF D + A L RGK FR EK+KKKR +++ Sbjct 382 FTRVGDPSQWDFASPA-LRDNSF--NFEDDYGTLANRDLIVTRGKGFRQEKNKKKRGSYR 438 Query 180 GCGEIPMTVNSIQF 193 G G I V S +F Sbjct 439 G-GRINTEVRSFKF 451 > Hs4758860_3 Length=142 Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 3/66 (4%) Query 133 LPAELKDNSFWKKKNDS--FAAKAAEQLGRVRGKDFRHEKSKKKRATWKGCGEIPMTVNS 190 + + + DNSF K+ + + +A + L +GK FRHEK+KKKR +++G G I + VNS Sbjct 78 VDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRG-GSISVQVNS 136 Query 191 IQFASD 196 I+F S+ Sbjct 137 IKFDSE 142 > CE08376 Length=971 Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Query 156 EQLGRVRGKDFRHEKSKKKRATWKGCGEIPMTVNSIQFASDSE 198 E LG+V GK FRHE KK+ G G I ++NSI+F SDS+ Sbjct 930 ESLGKVVGKAFRHE-KTKKKKGSYGGGPINQSINSIKF-SDSD 970 > 7301144 Length=1004 Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query 14 DLLQLCSAAARASEEAEE---AVEKPSKKSKKKKINDEESTKPKKKARAIPENENSEAEA 70 DLL L + +E EE +E P +K+K I + P+K+ A PE ++ + EA Sbjct 239 DLLNLSAREESVDQEPEEDPPKLEAPPRKAKSPIIFNRREKTPEKRPEAEPEIDSRQEEA 298 Query 71 TQAAPETDSSCSKQNGKTSEKKAKSEEETAAQEEPQD-SQRGGK 113 + +P+ DSS K SE+++ + + + P D SQR K Sbjct 299 EEKSPKKDSSADKAKEDRSERRSVHDRLGSKAQTPADRSQRNQK 342 > 7296239 Length=2151 Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 5/40 (12%) Query 43 KKINDEESTKPKKKARAIPENENSEAEATQAAPETDSSCS 82 KK ++E+ + P A+P+ + SE EA +AAP T+ +CS Sbjct 426 KKFSEEKPSSP-----AVPDGKVSEMEADEAAPNTEENCS 460 Lambda K H 0.303 0.118 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3407623970 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40