bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_2738_orf1 Length=162 Score E Sequences producing significant alignments: (Bits) Value At5g09570 69.3 3e-12 At5g64400 48.1 6e-06 Hs17485016 42.0 5e-04 SPAC6C3.02c 38.5 0.005 Hs20548057 34.3 0.12 YMR002w 31.6 0.71 CE01491 30.4 1.5 Hs20535261 29.3 3.3 At4g38710 28.5 5.7 > At5g09570 Length=139 Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 20/141 (14%) Query 23 RSSSGGGFFGSRSARPAAPAPVAAPP------SPPPVAGSSSGGGGFMANMVGNVASGMA 76 R SSGG S RP+ PA +PP +PPP S GG F+ N+ ++ G+A Sbjct 3 RGSSGG----RSSYRPSRPAAARSPPPQSVNRAPPPATAQPSSGGSFLGNIGASITEGLA 58 Query 77 SGVGFGVAQRAVDAVMGPRSMEVVHTNTAPAAPAPQQPMQLGMQQQNPCAAYQEELNQCM 136 G G R VD+VMGPR+ + H P+ M C + + C+ Sbjct 59 WGTGTAFGHRVVDSVMGPRTFK--HETVVSQVPSAANTMTA-------CDIHSKAFQDCV 109 Query 137 TRH-TDITLCQNYLDNLKACQ 156 +DI+ CQ Y+D L C+ Sbjct 110 NHFGSDISKCQFYMDMLSECK 130 > At5g64400 Length=144 Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query 70 NVASGMASGVGFGVAQRAVDAVMGPRSMEVVHTNTAPAAPAPQQPMQLGMQQQNPCAAYQ 129 +A GMA G G VA RAVD+VMGPR+++ A A+ AP L + C + Sbjct 52 TIAQGMAFGTGSAVAHRAVDSVMGPRTIQHEAVEAASASAAPAGSAML----SSTCDIHA 107 Query 130 EELNQCMTRH-TDITLCQNYLDNLKACQ 156 + C+ + ++I+ CQ Y+D L C+ Sbjct 108 KAFQDCIGSYGSEISKCQFYMDMLSECR 135 > Hs17485016 Length=142 Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 14/100 (14%) Query 62 GFMANMVGNVASGMASGVGFG-VAQRAVDAVMGPRSME----VVHTNTAPAAPAPQQPMQ 116 G MA M A+G+A G G V A+ S E V PAAP QP+Q Sbjct 43 GLMAQMA-TTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAP---QPLQ 98 Query 117 LGMQQQNPCAAYQEELNQCMTRHTDITLCQNYLDNLKACQ 156 +G PCA + C T +D++LC+ + + LK C+ Sbjct 99 MG-----PCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCK 133 > SPAC6C3.02c Length=172 Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 19/137 (13%) Query 36 ARPAAPAPVAAPPSPPPVAGSSSGGGGFMANMVGNVAS-GMASGVGFGVAQRAVDAVMG- 93 A P AP+ V P P V G SS GF N+V A G+ S +G V G Sbjct 32 APPPAPSRVQQAPPPTAVQGGSS--PGFFGNLVSTAAGVGIGSAIGHTVGSVITGGFSGS 89 Query 94 -----PRSMEV---VHTNTAPAA------PAPQQPMQLGMQQQNPCAAYQEELNQCMTRH 139 P V ++N+ P A P+ + + +N C + C+ H Sbjct 90 GSNNAPADTSVPQSSYSNSVPEAAYGSAPPSTFASSAISEEAKNACKGDAKMFADCINEH 149 Query 140 TDITLCQNYLDNLKACQ 156 + + C YL+ LKACQ Sbjct 150 -EFSQCSYYLEQLKACQ 165 > Hs20548057 Length=278 Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 0/33 (0%) Query 124 PCAAYQEELNQCMTRHTDITLCQNYLDNLKACQ 156 PC E+ +C H DI LC+ + + LK C+ Sbjct 240 PCFYEIEQFLECAQNHGDIKLCEGFNEVLKQCR 272 > YMR002w Length=156 Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 10/114 (8%) Query 49 SPPPVAGSSSGGGGFMANMVGN---VASGMASGVGFGVAQRAVDAVMGPRS--MEVVHTN 103 S PP AG+ + G A M VA G G G + + G S +E N Sbjct 41 SHPPAAGAQTRQPGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSGSDSAPVEQQQQN 100 Query 104 TAPAAPAPQQPMQLGMQQQNPCAAYQEELNQCMTRHT-DITLCQNYLDNLKACQ 156 A + Q QLG C +C+ + + +C YL LKACQ Sbjct 101 MANTSGQTQTDQQLG----RTCEIDARNFTRCLDENNGNFQICDYYLQQLKACQ 150 > CE01491 Length=154 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 0/33 (0%) Query 124 PCAAYQEELNQCMTRHTDITLCQNYLDNLKACQ 156 PC + C +D++LC + D K C+ Sbjct 118 PCEFEWRQFVDCAQNQSDVSLCNGFNDIFKQCK 150 > Hs20535261 Length=536 Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query 9 VLKMPRQRSSSGARRSSSGGGFFGSRSARPAAPAPVAAPPSP----------PPVAGSSS 58 LKM + R+ +GGG +R ARP AP + P P P + S Sbjct 43 TLKMCTDKLKISGLRAHAGGGATWAR-ARPTAPGRITRPGLPWQQRRRAARRPAMRESQD 101 Query 59 GGGGFMANMVGNVASGMASGVGFGVAQRAVD 89 G N VG+ A+ +G FGV D Sbjct 102 AAGAHGWNRVGSTATKWFTGAPFGVQSHRFD 132 > At4g38710 Length=452 Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query 22 RRSSSGGGFFGSRSARPAAPAP--VAAPPSPPPVAGSSSGGGGFMANMVGNVAS 73 R SGGGFF S+S A V+ PS P SS+GGGG G+ S Sbjct 184 RERGSGGGFFESQSQSKADEVDSWVSTKPSEPRRFVSSNGGGGDRFEKRGSFES 237 Lambda K H 0.317 0.129 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2244926132 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40