bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3073_orf1
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
At5g19950 40.0 0.004
CE13353_2 40.0 0.004
At5g17970 31.6 1.2
CE12292 31.2 1.5
YPR163c 31.2 1.5
Hs13376427 29.3 5.3
YDR052c 29.3 6.3
> At5g19950
Length=463
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 26/135 (19%)
Query 70 KSMQAPPEVAACAAIDGPAENVKSTATNYTLRRPLLCMVLSFQDVRLPTKDVEEDFSDGA 129
KS+ P E+ C+ + GP VL VR T+ E+F +
Sbjct 73 KSLPDPTELRRCSHLQGPK-------------------VLQISYVRDVTRSSAEEFVGSS 113
Query 130 QGIKGNQRRLLSLKLTDGRGTSFTAVELRFCQQLDIVPLLPGVKLLLLPGLVFYRGMALL 189
G +R+L LTDG+ T +A+E ++ + PG K+ L V G+ L
Sbjct 114 TG-----KRVLKFALTDGK-TEISALEYSHIPTIN-NDVTPGTKVRLENKAVIRDGLVCL 166
Query 190 TPRYLQNLAGGAKQL 204
TP+ + L G + L
Sbjct 167 TPKEVTVLGGYVQSL 181
> CE13353_2
Length=389
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query 81 CAAIDGPA------ENVKSTATNYTLRRPLLCMVLSFQDVRLP----------------T 118
C++I+ + ++ T L+ P++C + F DV P
Sbjct 73 CSSIESSSFPVFGNHGIEETVAKQNLQGPIVCQINGFIDVGSPYYQQYCSMSGNGQKEDQ 132
Query 119 KDVEEDFSDGAQGIKGNQRRLLSLKLTDGRGTSFTAVELRFCQQLDIVPLLPGVKLLLLP 178
E+ F + RLL L L DG T+ A+E C QL + PG K+L++P
Sbjct 133 SGFEKVFHEKDNDTDQKPSRLLKLTLFDGE-TTLKAIEFWKCPQLSL-HYKPGTKILIVP 190
Query 179 GLVFYRGMALLTPRYLQNLAG 199
+G LL + L G
Sbjct 191 PCAIRKGTFLLKRNNCKVLGG 211
> At5g17970
Length=780
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query 102 RPLLCMVLSFQDVRLPTKDVEEDFSDGAQGIKGNQRRLLS--LKLTD----GRGTSFTAV 155
RP + L+ +D +L E +G Q +K +R LS K+ D R T+ +
Sbjct 612 RPEFLVELTMRDSKL------EKLWEGIQPLKSLKRMDLSASTKIKDIPNLSRATNLEKL 665
Query 156 ELRFCQQLDIVP 167
LRFC+ L IVP
Sbjct 666 YLRFCKNLVIVP 677
> CE12292
Length=926
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query 112 QDVRLPTKDVEEDFSDGAQGIKGNQRR-LLSLKLTDGRGTSFTAVELRFCQQLDIVPLLP 170
++ R KDV D + Q ++R +L ++LTDG T A+EL + D +LP
Sbjct 125 EENRDKEKDVASDRMNHTQTKNAIKKRGMLKIELTDGVNT-LKAIELD--EVFDEKIMLP 181
Query 171 GVKLLLLPGLVFYRGMALLTPRYLQNLAGGAKQL 204
G K++L + RG LL L G + L
Sbjct 182 GAKIILTGKVKCRRGNLLLDKSNCAFLGGRVESL 215
> YPR163c
Length=436
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query 15 VPWALDFTPEGFAAIEQSGASSPAAVKDYVLSADLR 50
+PW D TPEG A + G P AV++ VL +LR
Sbjct 108 IPW--DITPEGVQAWVEDGLVKPEAVEEVVLPKNLR 141
> Hs13376427
Length=625
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query 138 RLLSLKLTDG----RGTSFTAVELRFCQQLDIVPLLPGVKLLLLPGLVFYRGMALLTPRY 193
R+L L+LTDG +G + + + L PG K+L+ + F G+ LL P
Sbjct 133 RMLMLQLTDGIVQIQGMEYQPIPILHSD------LPPGTKILIYGNISFRLGVLLLKPEN 186
Query 194 LQNLAG 199
++ L G
Sbjct 187 VKVLGG 192
> YDR052c
Length=704
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query 26 FAAIEQSGASSPAAVKDYVLSADLRRLHLAPHPADPTNFSALHSKSMQAPPEV---AACA 82
F A+++ A S KD + + R P NF + +KS+ A +V
Sbjct 568 FNALKKDEAPSKETGKDSAVHLETNR--------KPQNFPKVATKSVSADSKVHNDIKIT 619
Query 83 AIDGPAENVKSTATNYTL 100
+ P + KST+TN TL
Sbjct 620 TTESPTASKKSTSTNVTL 637
Lambda K H
0.321 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3658712052
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40