bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_3160_orf2 Length=307 Score E Sequences producing significant alignments: (Bits) Value Hs14249166 50.8 3e-06 CE28189 50.8 4e-06 7298289 49.7 9e-06 At1g47640 41.2 0.003 CE18887 30.0 6.6 > Hs14249166 Length=224 Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 3/178 (1%) Query 61 MTVLHGAACAAFCFGPIAAIYKATNLSDQTGTKKLLALATAFYFVNLFGKSLIVATLLPS 120 MT+ H C A + P YK + LS+ K + + FV L K L +AT P Sbjct 1 MTLFHFGNCFALAYFPYFITYKCSGLSEYNAFWKCVQAGVTYLFVQL-CKMLFLATFFP- 58 Query 121 TCESSFFCSVIIDLVTVVMELXSIRYIXHSKKALAYSSETRLLCIGLGWSLGQVLCSNGH 180 T E + I + + +++ + + A E +++ LGW+ +++ S Sbjct 59 TWEGGIY-DFIGEFMKASVDVADLIGLNLVMSRNAGKGEYKIMVAALGWATAELIMSRCI 117 Query 181 LLLRAIGGNSFHWEGVYQAMQSSLSPISYLSITALMFLSTRRHLPMTSRAGLVFLASL 238 L G F W+ + ++ S++S + Y+ +A +++ TR L T R ++ L L Sbjct 118 PLWVGARGIEFDWKYIQMSIDSNISLVHYIVASAQVWMITRYDLYHTFRPAVLLLMFL 175 > CE28189 Length=225 Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 14/167 (8%) Query 61 MTVLHGAACAAFCFGPIAAIYKATNLSDQTGTKKLLALATAFYFVNLFGKSLIVATLLPS 120 M+ H C A F P +YK + +++ + K A A+ Y + K LI+AT P+ Sbjct 1 MSFFHFINCFALAFAPYFIVYKYSGINEYSSIWKC-ATASGGYLLTQLAKLLIIATFFPA 59 Query 121 TCESSF-----FCSVIIDLVTVV-MELXSIRYIXHSKKALAYSSETRLLCIGLGWSLGQV 174 F F D++ V+ + L + LA E R + GLGW Sbjct 60 LDSEGFSIVPEFLKSSADIIDVIGLHLLMTNF-------LAGKGEVRFVVGGLGWGFAHS 112 Query 175 LCSNGHLLLRAIGGNSFHWEGVYQAMQSSLSPISYLSITALMFLSTR 221 + LL G +F W V ++ SS + +S+ L ++ TR Sbjct 113 VAHRLVLLWVGARGTAFTWRWVQTSLDSSADLLVIVSLACLTWMITR 159 > 7298289 Length=227 Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%) Query 61 MTVLHGAACAAFCFGPIAAIYKATNLSDQTGTKKLLALATAFYFVNLFGKSLIVATLL-- 118 MT+ H C A P YK + LS+ K + + F L K L++AT Sbjct 1 MTLYHFGNCVAL-LTPYYFTYKYSGLSEYGAFWKCVQAGGIYIFTQLV-KMLVLATFFYS 58 Query 119 ---PSTCESSFFCSV------IIDLVTVVMELXSIRYIXHSKKALAYSSETRLLCIGLGW 169 S+ E +FF + I DL+ + L I HSK L+ GLGW Sbjct 59 DAPSSSGEFNFFAEILRCSMDIADLLGFALILSRIPGKGHSK----------LITAGLGW 108 Query 170 SLGQVLCSNGHLLLRAIGGNSFHWEGVYQAMQSSLSPISYLSITALMFLSTRRHL 224 + +V+ S G +L G F W + + ++S++ + +++ L++L TR L Sbjct 109 ATAEVILSRGIMLWVGARGTEFSWIYILKCLESNVLLVQHITTATLIWLFTRHDL 163 > At1g47640 Length=228 Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 16/163 (9%) Query 61 MTVLHGAACAAFCFGPIAAIYKATNLS--DQTGTKKLLALATAFYFVNLFGKSLIVATLL 118 MT+ H CA FGP A Y AT LS D GT A Y K + +AT L Sbjct 1 MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTS---VKAAVVYLATALVKLVCLATFL 57 Query 119 PSTCESSFF------CSVIIDLVTVVMELXSIRYIXHSKKALAYSSETRLLCIGLGWSLG 172 E+ F +I + V ++ + H S + +GLGW+ Sbjct 58 -QVSETEVFDPYQEALKAMIGFIDVAGLYYALAQLTHRN----ISQNHKFQAVGLGWAFA 112 Query 173 QVLCSNGHLLLRAIGGNSFHWEGVYQAMQSSLSPISYLSITAL 215 + L G F W+ V Q ++++ + + +S+ AL Sbjct 113 DSVLHRLAPLWVGARGLEFTWDYVLQGLEANANLVFTISLAAL 155 > CE18887 Length=647 Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%) Query 259 FLAEDITPACWLSLVLHA-----AVSISVGITTYLTLRAGHG 295 FLA D A WL VL + A+S+++G TY+ +R G G Sbjct 438 FLALDSREARWLPTVLASRHKKIAISVAIGFDTYVIIRHGIG 479 Lambda K H 0.327 0.137 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 7025720074 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40