bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_4459_orf1
Length=207
Score E
Sequences producing significant alignments: (Bits) Value
Hs14149938 34.3 0.16
SPBC1709.13c 34.3 0.18
At3g07670 33.1 0.39
Hs13376288 32.7 0.47
Hs8393013 30.4 2.8
SPCC1223.04c 29.6 4.7
CE26269 29.3 6.3
> Hs14149938
Length=512
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFG 63
+L+PL ++ NH +G + + D+R C+ L D AG Q+Y YG + +F+ + G
Sbjct 187 ALIPLWDMCNHT-NGLITTGYNLEDDRCECVALQ-DFRAGEQIYIFYGTRSNAEFVIHSG 244
Query 64 F 64
F
Sbjct 245 F 245
> SPBC1709.13c
Length=547
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 0/61 (0%)
Query 5 LVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFGF 64
L+PL + LNH +L + DE+S+ L V G Q++ +YGP + + L +GF
Sbjct 189 LLPLIDSLNHKPKQPILWNSDFQDEKSVQLISQELVAKGNQLFNNYGPKGNEELLMGYGF 248
Query 65 C 65
C
Sbjct 249 C 249
> At3g07670
Length=504
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVP--AGAQVYAHYGPLQSWQFLAY 61
+LVP ++LNH+ + + D+ S + D P G QV+ YG + + L
Sbjct 259 ALVPWADMLNHNCEVETF---LDYDKSSKGVVFTTDRPYQPGEQVFISYGNKSNGELLLS 315
Query 62 FGFCPR 67
+GF PR
Sbjct 316 YGFVPR 321
> Hs13376288
Length=449
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query 5 LVPLGELLNH-HYHGQVLSPAFEGDERSLCLRLACD--VPAGAQVYAHYGPLQSWQFLAY 61
+VP ++LNH H L + + CLR+ +P G +++ YG + +WQ +
Sbjct 219 MVPAADILNHLANHNANL------EYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHM 272
Query 62 FGFC 65
+GF
Sbjct 273 YGFV 276
> Hs8393013
Length=440
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query 2 CASLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAY 61
CA L P +LLNH H QV AF + S +R +V+ YGP + +
Sbjct 226 CA-LAPYLDLLNHSPHVQV-KAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLE 283
Query 62 FGF 64
+GF
Sbjct 284 YGF 286
> SPCC1223.04c
Length=381
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFG 63
+L P+ E NH Q A ++ ++ + G Q++ YGP + + +G
Sbjct 180 TLAPIFEYFNHSPEAQT---ALINTRGTITIKSTRRIDKGEQIFLCYGPHGNDKLFTEYG 236
Query 64 FCPRSFP 70
FC + P
Sbjct 237 FCLSNNP 243
> CE26269
Length=422
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query 4 SLVPLGELLNH-HYHGQVLSPAFEG------DERSLCLRLACDVPAGAQVYAHYGPLQSW 56
+L+P+ ++ NH + VL+ E +E + CDV AG +V YG
Sbjct 291 ALIPVLDMANHENVLTDVLTEPIEDLVCYSPEEECAVITSHCDVKAGNEVTIFYGCRSKG 350
Query 57 QFLAYFGFCP 66
+ L + GF P
Sbjct 351 EHLLHNGFVP 360
Lambda K H
0.319 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3682951018
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40