bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_4459_orf1 Length=207 Score E Sequences producing significant alignments: (Bits) Value Hs14149938 34.3 0.16 SPBC1709.13c 34.3 0.18 At3g07670 33.1 0.39 Hs13376288 32.7 0.47 Hs8393013 30.4 2.8 SPCC1223.04c 29.6 4.7 CE26269 29.3 6.3 > Hs14149938 Length=512 Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFG 63 +L+PL ++ NH +G + + D+R C+ L D AG Q+Y YG + +F+ + G Sbjct 187 ALIPLWDMCNHT-NGLITTGYNLEDDRCECVALQ-DFRAGEQIYIFYGTRSNAEFVIHSG 244 Query 64 F 64 F Sbjct 245 F 245 > SPBC1709.13c Length=547 Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 0/61 (0%) Query 5 LVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFGF 64 L+PL + LNH +L + DE+S+ L V G Q++ +YGP + + L +GF Sbjct 189 LLPLIDSLNHKPKQPILWNSDFQDEKSVQLISQELVAKGNQLFNNYGPKGNEELLMGYGF 248 Query 65 C 65 C Sbjct 249 C 249 > At3g07670 Length=504 Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVP--AGAQVYAHYGPLQSWQFLAY 61 +LVP ++LNH+ + + D+ S + D P G QV+ YG + + L Sbjct 259 ALVPWADMLNHNCEVETF---LDYDKSSKGVVFTTDRPYQPGEQVFISYGNKSNGELLLS 315 Query 62 FGFCPR 67 +GF PR Sbjct 316 YGFVPR 321 > Hs13376288 Length=449 Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%) Query 5 LVPLGELLNH-HYHGQVLSPAFEGDERSLCLRLACD--VPAGAQVYAHYGPLQSWQFLAY 61 +VP ++LNH H L + + CLR+ +P G +++ YG + +WQ + Sbjct 219 MVPAADILNHLANHNANL------EYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHM 272 Query 62 FGFC 65 +GF Sbjct 273 YGFV 276 > Hs8393013 Length=440 Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query 2 CASLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAY 61 CA L P +LLNH H QV AF + S +R +V+ YGP + + Sbjct 226 CA-LAPYLDLLNHSPHVQV-KAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLE 283 Query 62 FGF 64 +GF Sbjct 284 YGF 286 > SPCC1223.04c Length=381 Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query 4 SLVPLGELLNHHYHGQVLSPAFEGDERSLCLRLACDVPAGAQVYAHYGPLQSWQFLAYFG 63 +L P+ E NH Q A ++ ++ + G Q++ YGP + + +G Sbjct 180 TLAPIFEYFNHSPEAQT---ALINTRGTITIKSTRRIDKGEQIFLCYGPHGNDKLFTEYG 236 Query 64 FCPRSFP 70 FC + P Sbjct 237 FCLSNNP 243 > CE26269 Length=422 Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Query 4 SLVPLGELLNH-HYHGQVLSPAFEG------DERSLCLRLACDVPAGAQVYAHYGPLQSW 56 +L+P+ ++ NH + VL+ E +E + CDV AG +V YG Sbjct 291 ALIPVLDMANHENVLTDVLTEPIEDLVCYSPEEECAVITSHCDVKAGNEVTIFYGCRSKG 350 Query 57 QFLAYFGFCP 66 + L + GF P Sbjct 351 EHLLHNGFVP 360 Lambda K H 0.319 0.137 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3682951018 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40