bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_4472_orf2
Length=57
Score E
Sequences producing significant alignments: (Bits) Value
Hs6912676 57.8 5e-09
CE06519 53.9 7e-08
SPCC188.11 51.6 3e-07
7291006 50.8 6e-07
At1g77180 50.1 1e-06
Hs20475567_2 41.2 5e-04
> Hs6912676
Length=536
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 0/50 (0%)
Query 8 AQSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57
+Q Q S + RE PPY +R+G+IPR EDFG GGA+PEI VAQ+PL
Sbjct 26 SQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLD 75
> CE06519
Length=535
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 0/38 (0%)
Query 20 AREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57
++E PPY R F PR EDFG GGA+PEI VAQFPLG
Sbjct 41 SKEPPPYGKRTSFRPRGPEDFGDGGAFPEIHVAQFPLG 78
> SPCC188.11
Length=557
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 23 IPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56
IPPY R+G+ P EDFG GGA+PEI VAQ+PL
Sbjct 43 IPPYGQRKGWFPSSPEDFGDGGAFPEIHVAQYPL 76
> 7291006
Length=360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 24 PPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57
PPY R+ ++P + DFG GGA+PEI VAQ+PLG
Sbjct 42 PPYGQRKDWVPHTDADFGDGGAFPEIHVAQYPLG 75
> At1g77180
Length=613
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 0/48 (0%)
Query 9 QSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56
+S KS + +P YL+RQG P+ EDFG GGA+PEI + Q+PL
Sbjct 32 ESETVKSSSIKFKVVPAYLNRQGLRPKNPEDFGDGGAFPEIHLPQYPL 79
> Hs20475567_2
Length=320
Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 28 HRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56
+R+G+ R EDFG GGA+PEI VAQ+PL
Sbjct 3 YRKGWTLRLLEDFGDGGAFPEIHVAQYPL 31
Lambda K H
0.321 0.141 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1191047922
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40