bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_4563_orf3 Length=85 Score E Sequences producing significant alignments: (Bits) Value Hs11321601 103 8e-23 Hs4505749 80.1 9e-16 HsM4505747 65.9 2e-11 Hs21361070 64.7 4e-11 CE28266 55.5 2e-08 7303792 36.6 0.010 CE05467 31.6 0.34 At2g01650 27.3 7.7 Hs4885279 26.9 8.8 > Hs11321601 Length=784 Score = 103 bits (257), Expect = 8e-23, Method: Composition-based stats. Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 0/76 (0%) Query 1 GKGKKFLSEASGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAKYR 60 G+GKKF ++ S CVLGISKR ++FQP ELKK+T+ E RIPKEQW LKL PLMK LAKY+ Sbjct 706 GRGKKFTTDDSICVLGISKRNVIFQPVAELKKQTDFEHRIPKEQWWLKLRPLMKILAKYK 765 Query 61 VSFGGSDASQREPVQP 76 S+ SD+ Q E VQP Sbjct 766 ASYDVSDSGQLEHVQP 781 > Hs4505749 Length=780 Score = 80.1 bits (196), Expect = 9e-16, Method: Composition-based stats. Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 0/73 (0%) Query 11 SGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAKYRVSFGGSDASQ 70 SGCVLG+ KR L+FQP ELK +T+ E RIPKEQW LKL P++K LAKY + SD + Sbjct 707 SGCVLGMRKRALVFQPVAELKDQTDFEHRIPKEQWWLKLRPILKILAKYEIDLDTSDHAH 766 Query 71 REPVQPRGPEEPA 83 E + + E A Sbjct 767 LEHITRKRSGEAA 779 > HsM4505747 Length=780 Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Query 2 KGKKFLSEA-SGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAKYR 60 KG+ F + S CV+G+ K+ + F P ELKK+T+ E R+P+EQW L L ++K LA+YR Sbjct 696 KGRVFANAPDSACVIGLKKKAVAFSPVTELKKDTDFEHRMPREQWWLSLRLMLKMLAQYR 755 Query 61 VSFGGSDASQREPVQPR 77 +S + + E V R Sbjct 756 ISMAAYVSGELEHVTRR 772 > Hs21361070 Length=827 Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Query 2 KGKKFLSEA-SGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAKYR 60 KG+ F + S CV+G+ K+ + F P ELKK+T+ E R+P+EQW L L ++K LA+YR Sbjct 743 KGRVFANAPDSACVIGLKKKAVAFSPVTELKKDTDFEHRMPREQWWLSLRLMLKMLAQYR 802 Query 61 VSFGGSDASQREPVQPR 77 +S + + E V R Sbjct 803 ISMAAYVSGELEHVTRR 819 > CE28266 Length=814 Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 8 SEASGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAKYRVSFGGS 66 S + +LG+ R ++F P +LKKET+ E R+P EQW + L PL++ LA++R + S Sbjct 740 SAHTATLLGLKGRKVVFTPVQDLKKETDFEHRLPSEQWWMALRPLLRVLARHRSTVESS 798 > 7303792 Length=950 Score = 36.6 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 0/38 (0%) Query 8 SEASGCVLGISKRTLLFQPGGELKKETNLEPRIPKEQW 45 S + +LGI R F P +L ETN + RIPK+QW Sbjct 876 SPDTATLLGIVSRQYRFSPLVDLIAETNFDQRIPKKQW 913 > CE05467 Length=756 Score = 31.6 bits (70), Expect = 0.34, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 0/46 (0%) Query 13 CVLGISKRTLLFQPGGELKKETNLEPRIPKEQWGLKLGPLMKFLAK 58 CV+G+ +L + P L K+ E +P W L L PL++ + K Sbjct 702 CVIGLRGSSLRYVPVQGLGKKVCFEHGVPHNMWWLDLHPLVEAMTK 747 > At2g01650 Length=465 Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query 7 LSEASGCVLGISKRTLLFQPGGELKKETN---LEPRIPKEQWGLKLGPLMKFLAKYRVSF 63 + EA G V G LL G ELK+E + +P E+ + + ++ +L K + Sbjct 212 IKEAIGDVAG--GVELLELVGFELKEENDEIWAVMDVPSEEQSILINKVVGYLEKRKTES 269 Query 64 GGSDASQREPVQPR 77 GS A EPV P+ Sbjct 270 SGSSAQVMEPVAPK 283 > Hs4885279 Length=1106 Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 0/43 (0%) Query 37 EPRIPKEQWGLKLGPLMKFLAKYRVSFGGSDASQREPVQPRGP 79 EP + G L P M F + +GG + + EP RGP Sbjct 706 EPEVGTSMVGSGLNPYMDFPPTDTLGYGGPEGAAAEPYGARGP 748 Lambda K H 0.315 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1194132014 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40