bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_5843_orf1
Length=62
Score E
Sequences producing significant alignments: (Bits) Value
YDL029w 30.4 0.83
7293239 30.0 1.2
Hs5031571 29.3 2.0
7292092_3 28.9 2.5
CE06111 28.5 3.1
> YDL029w
Length=391
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query 14 PLLENFYLSHFERYLDVQG-DTLRPLFKLYLRRQIVLN---DFPRTQREVQQQ 62
P+ E+ LSH R LDV G D R L L RR N DF T R+++++
Sbjct 167 PVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGYAFNRTADF-ETVRQIKEK 218
> 7293239
Length=394
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query 14 PLLENFYLSHFERYLDVQG-DTLRPLFKLYLRRQIVLN 50
P+ E F L H R LD+ G D R L KL L R N
Sbjct 168 PVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFN 205
> Hs5031571
Length=394
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query 14 PLLENFYLSHFERYLDVQG-DTLRPLFKLYLRRQIVLN---DFPRTQREVQQQ 62
P+ E F L H R LD+ G D R L KL L R N DF T R ++++
Sbjct 168 PVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADF-ETVRMIKEK 219
> 7292092_3
Length=572
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 0/37 (0%)
Query 16 LENFYLSHFERYLDVQGDTLRPLFKLYLRRQIVLNDF 52
LENF +H + Y+ +GD PL ++Y Q +L +
Sbjct 207 LENFNWNHMDLYICTRGDVDYPLMEVYPGAQRILANL 243
> CE06111
Length=395
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query 14 PLLENFYLSHFERYLDVQG-DTLRPLFKLYLRR 45
P+ E F L H R LD+ G D + L KL L+R
Sbjct 168 PVYEGFALHHLTRRLDIAGRDITKYLIKLLLQR 200
Lambda K H
0.323 0.143 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1175803722
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40