bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6580_orf1
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
Hs17999537 34.7 0.041
7303518 28.5 2.8
CE00122 28.5 2.8
At5g16180 28.5 2.9
At5g56780 27.3 6.6
> Hs17999537
Length=2335
Score = 34.7 bits (78), Expect = 0.041, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query 50 EYLAALEPFGWVRISPSTSSELEDQESDTSPSRTADE-LLDGEAS 93
EYL +EP GW+ P+ S +L Q+ T AD DGE +
Sbjct 2167 EYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKT 2211
> 7303518
Length=2396
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
Query 48 SEEYLAALEPFGWVRISPSTSSELEDQESDT 78
+ +YL +EP GW+ P+ +L Q+ T
Sbjct 2225 THQYLKDMEPLGWIHTQPNELPQLSPQDITT 2255
> CE00122
Length=2329
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query 31 NLPSQIDPLVSSAEADASEEYLAALEPFGWVRISPSTSSELEDQESDTSPSRTADEL-LD 89
NLP+Q+ E L EP GW+ P+ +L Q+ T D + D
Sbjct 2151 NLPTQL----------PDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWD 2200
Query 90 GEAS 93
GE +
Sbjct 2201 GEKT 2204
> At5g16180
Length=718
Score = 28.5 bits (62), Expect = 2.9, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 62 RISPSTSSELEDQESDTSPSRTADELLDG 90
R PS SSE +D+ S + R AD LLDG
Sbjct 288 RGGPSYSSEGQDEISSSLYEREADRLLDG 316
> At5g56780
Length=488
Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 0/64 (0%)
Query 9 TVRAPAENAAGSQSTYRFEDGGNLPSQIDPLVSSAEADASEEYLAALEPFGWVRISPSTS 68
T+ +P + G F GG++ + P+ S EA+A+E L + + W + S
Sbjct 130 TIESPVKAVTGGLFEDIFSKGGSILYRWAPMGSKREAEATEGMLLSTFDYAWNKGSNGER 189
Query 69 SELE 72
+L+
Sbjct 190 RQLD 193
Lambda K H
0.303 0.121 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1160968786
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40