bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6746_orf1
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
Hs4507433 42.0 3e-04
At5g47130 42.0 3e-04
Hs14757108 42.0 3e-04
At4g17580 33.5 0.11
7295121 32.7 0.21
Hs17454125 28.1 4.4
> Hs4507433
Length=237
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
Query 85 AATAQVVPAAFLASVAIFCCLSAAALVAKQRSYLYLGSI 123
A ++P AF+ + IF C + +AL A++RSYL+LG I
Sbjct 108 AVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGI 146
> At5g47130
Length=187
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 88 AQVVPAAFLASVAIFCCLSAAALVAKQRSYLYLGSILGAAITYLS 132
+ ++ AFL + IF C SA A++A++R Y+YLG +L + + L+
Sbjct 60 SSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLT 104
> Hs14757108
Length=237
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
Query 85 AATAQVVPAAFLASVAIFCCLSAAALVAKQRSYLYLGSI 123
A ++P AF+ + IF C + +AL A++RSYL+LG I
Sbjct 108 AVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGI 146
> At4g17580
Length=247
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 0/37 (0%)
Query 88 AQVVPAAFLASVAIFCCLSAAALVAKQRSYLYLGSIL 124
+ V+ AF+ + F C SAAA++A +R YLY G+ L
Sbjct 118 SSVLVTAFVGTAVAFVCFSAAAMLATRREYLYHGASL 154
> 7295121
Length=245
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 0/40 (0%)
Query 90 VVPAAFLASVAIFCCLSAAALVAKQRSYLYLGSILGAAIT 129
++ +A + F LS +AL+A+Q YLYLG +L + I
Sbjct 116 IILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVIN 155
> Hs17454125
Length=1849
Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 0/41 (0%)
Query 70 LLPLCCCCCCRCCAAAATAQVVPAAFLASVAIFCCLSAAAL 110
LL CCC C T ++ PA L + +F S +AL
Sbjct 684 LLGALCCCICDPGVNVVTQEIKPAESLGQLLLFHLNSKSAL 724
Lambda K H
0.330 0.133 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1319765976
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40