bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7355_orf1
Length=62
Score E
Sequences producing significant alignments: (Bits) Value
Hs16579885 43.5 9e-05
SPBP8B7.03c 43.1 1e-04
Hs14741953 42.0 3e-04
At5g02870 40.8 6e-04
At3g09630 40.8 6e-04
SPBC1711.06 38.9 0.002
ECU08g0830 38.9 0.002
CE07669 38.9 0.002
Hs18583527_2 37.7 0.005
YBR031w 34.3 0.053
YDR012w 34.3 0.058
> Hs16579885
Length=427
Score = 43.5 bits (101), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPD 60
+ ++L++L LAPGG VGR C++T +A ++L +L+G + AA K Y+L + N D
Sbjct 231 NVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG--TWRKAASLKSNYNLPMHKMINTD 288
Query 61 VA 62
++
Sbjct 289 LS 290
> SPBP8B7.03c
Length=363
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query 4 RLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPDV 61
RL++L LAPGG +GR ++T +A L +FG S AA K+ Y L ++ N DV
Sbjct 234 RLNLLQLAPGGHLGRFVIWTKSAFGLLDSVFG--STTEAAQLKKNYFLPENIISNADV 289
> Hs14741953
Length=352
Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPD 60
+ ++L++ LAPGG VGR C++T +A ++L +L+G + AA K Y+L + N D
Sbjct 136 NVSKLTISKLAPGGHVGRFCIWTGSAFRKLDELYG--TWRKAASLKSNYNLPMHKMINTD 193
Query 61 VA 62
++
Sbjct 194 LS 195
> At5g02870
Length=407
Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query 4 RLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPDVA 62
RL++L LAPGG +GR ++T +A ++L+ ++G S + +K+ Y L R + N D+A
Sbjct 241 RLNLLKLAPGGHLGRFVIWTKSAFEKLESIYG--SFEKPSEKKKGYVLPRAKMVNADLA 297
> At3g09630
Length=406
Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query 4 RLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPDVA 62
RL++L LAPGG +GR ++T +A ++L+ ++G S + +K+ Y L R + N D+A
Sbjct 240 RLNLLKLAPGGHLGRFVIWTKSAFEKLESIYG--SFEKPSEKKKGYVLPRAKMVNADLA 296
> SPBC1711.06
Length=363
Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query 4 RLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPDV 61
RL++L LAPGG +GR ++T +A L +FG S A K+ Y L ++ N DV
Sbjct 234 RLNLLQLAPGGHLGRFVIWTKSAFGLLDSVFG--STTEVAQLKKNYFLPENIISNADV 289
> ECU08g0830
Length=335
Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 0/35 (0%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFG 35
S L +L LAPGGV GRL ++T +A ++L ++FG
Sbjct 227 SIDSLDLLELAPGGVAGRLIIWTESAFEKLDKIFG 261
> CE07669
Length=345
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPD 60
+ RL++L LAPGG +GRL ++T +A ++L ++G ++ K+ + + P++ N D
Sbjct 230 NVERLNLLKLAPGGHLGRLIIWTESAFKKLDTIYGTTVA-NSSQLKKGWSVPLPIMANSD 288
Query 61 VA 62
+
Sbjct 289 FS 290
> Hs18583527_2
Length=276
Score = 37.7 bits (86), Expect = 0.005, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query 3 ARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPDVA 62
++L++L LAPGG VG C++T +A +L + G + AA K Y+L + N D++
Sbjct 127 SKLNILKLAPGGHVGHFCIWTQSAFWKLDEFSG--TWHKAASLKSNYNLPMHKMINTDLS 184
> YBR031w
Length=362
Score = 34.3 bits (77), Expect = 0.053, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPD 60
+ A L++L LAPG +GR ++T AA +L Q++G + A K Y L ++ D
Sbjct 229 NVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWGSET---VASSKVGYTLPSHIISTSD 285
Query 61 V 61
V
Sbjct 286 V 286
> YDR012w
Length=362
Score = 34.3 bits (77), Expect = 0.058, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query 1 STARLSVLLLAPGGVVGRLCVFTAAALQQLQQLFGDPSGLAAAPRKRRYHLLRPLLQNPD 60
+ A L++L LAPG +GR ++T AA +L Q++G + A K Y L ++ D
Sbjct 229 NVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWGSET---VASSKVGYTLPSHIISTSD 285
Query 61 V 61
V
Sbjct 286 V 286
Lambda K H
0.325 0.140 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1175803722
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40