bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_8141_orf1
Length=59
Score E
Sequences producing significant alignments: (Bits) Value
At1g03140 43.1 1e-04
Hs4506123 38.5 0.003
Hs4758558 35.4 0.027
CE05372 33.5 0.090
7300471 33.1 0.12
CE27946_2 33.1 0.14
7293972 30.8 0.68
At2g41500 30.0 1.1
SPCC126.14 29.3 2.1
At1g67850 28.5 2.8
CE20741 28.5 2.8
SPAC57A7.05 27.7 5.0
7293735 27.7 5.8
> At1g03140
Length=420
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query 3 EVFRRLRAIKQPVTLFGETPWERYQRLCRLEVQLM---DDEMPEGQKNVFL 50
EV RRLR +KQP+TLFGE R RL + + + D +M EGQ N FL
Sbjct 108 EVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFL 158
> Hs4506123
Length=342
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query 3 EVFRRLRAIKQPVTLFGETPWERYQRLCRLEVQLMDDEMPEGQKN 47
EV RRLR +P+ LFGET ++ +QRL ++E+ + E+ +G +N
Sbjct 83 EVIRRLRERGEPIRLFGETDYDAFQRLRKIEI--LTPEVNKGLRN 125
> Hs4758558
Length=522
Score = 35.4 bits (80), Expect = 0.027, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 2 TEVFRRLRAIKQPVTLFGETPWERYQRL 29
+EV LRA+ +P+TLFGE P ER +RL
Sbjct 106 SEVKACLRALGEPITLFGEGPAERRERL 133
> CE05372
Length=496
Score = 33.5 bits (75), Expect = 0.090, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 3 EVFRRLRAIKQPVTLFGETPWERYQRLCRLEVQLMDDEM 41
+V +LRA+ QP+ LFGE +R +RL L + +DE+
Sbjct 80 QVKLKLRALNQPICLFGEDALDRRERLRALLSTMSEDEI 118
> 7300471
Length=340
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
Query 2 TEVFRRLRAIKQPVTLFGETPWERYQRLCRLEV 34
TEV RRLR +P+ +FGET E + RL + E+
Sbjct 77 TEVIRRLRERGEPILIFGETEPEAFDRLRQCEI 109
> CE27946_2
Length=1919
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
Query 20 ETPWERYQRLCRLEVQLMDDEMPEGQKNVFLSLQKEAEE 58
+T +ERYQRL R + LM+D M +KN+F +KE +E
Sbjct 689 KTEFERYQRLVREQALLMEDMMLTPEKNLFQFDEKETDE 727
> 7293972
Length=553
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 0/44 (0%)
Query 2 TEVFRRLRAIKQPVTLFGETPWERYQRLCRLEVQLMDDEMPEGQ 45
TE+ LR + +P+ FGE P ER +RL L L ++ + + Q
Sbjct 135 TEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENAINKRQ 178
> At2g41500
Length=554
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
Query 7 RLRAIKQPVTLFGETPWERYQRLCRL 32
RLR + +P+TLFGE ER RL +L
Sbjct 129 RLRRLGEPITLFGEQEMERRARLTQL 154
> SPCC126.14
Length=343
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 0/31 (0%)
Query 2 TEVFRRLRAIKQPVTLFGETPWERYQRLCRL 32
TE+ +LR +K+P+ LFGE+ QR L
Sbjct 127 TEIIAKLREMKEPIRLFGESEEATIQRYYSL 157
> At1g67850
Length=332
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 0/41 (0%)
Query 19 GETPWERYQRLCRLEVQLMDDEMPEGQKNVFLSLQKEAEEE 59
G+ PW+ + C+ E + M +K+ F SLQ E
Sbjct 286 GKAPWQGVRDRCKKEWTMFQSRMANAEKDYFKSLQVEGSSN 326
> CE20741
Length=348
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query 2 TEVFRRLRAIKQPVTLFGETPWERYQRLCRLEVQLMDDEMPEGQKN 47
+E+ RLR P+ LFGET + +RL +LE L ++ EG +N
Sbjct 88 SEIQTRLRQRNHPIMLFGETDIDVRKRLHQLE--LAQPDLNEGWEN 131
> SPAC57A7.05
Length=1337
Score = 27.7 bits (60), Expect = 5.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 7 RLRAIKQPVTLFGETPWERYQRLCRLEVQLMD 38
RL + + G P E+YQ LC+ +++L+D
Sbjct 1143 RLNMVNFEPSFKGRWPMEKYQLLCKTQLELVD 1174
> 7293735
Length=459
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query 15 VTLFGETPWERYQRLCRLEVQLMDDEMPEGQK 46
VT +GE R QRL +LE QL D+ + E Q+
Sbjct 39 VTQYGE----RKQRLAKLEAQLKDESLSEAQR 66
Lambda K H
0.318 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1184950242
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40