bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_8244_orf2
Length=61
Score E
Sequences producing significant alignments: (Bits) Value
At1g20260 87.0 7e-18
At1g76030 86.7 9e-18
At4g38510 84.7 4e-17
7299652 83.6 7e-17
YBR127c 83.2 1e-16
Hs19913428 82.4 2e-16
CE04424 81.3 4e-16
SPAC637.05c 79.0 2e-15
ECU10g1040 77.8 4e-15
Hs19913426 77.8 5e-15
CE23245 66.6 9e-12
YDL185w 28.9 2.4
At1g78900 27.3 6.9
> At1g20260
Length=468
Score = 87.0 bits (214), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVILD VK PKY EIV + LGDGSTR GQVLE+ G +AVVQVFEGT+GIDN+ +F
Sbjct 28 PLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQF 86
> At1g76030
Length=486
Score = 86.7 bits (213), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVILD VK PKY EIV + LGDGSTR GQVLE+ G +AVVQVFEGT+GIDN+ +F
Sbjct 28 PLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQF 86
> At4g38510
Length=487
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVIL+ VK PKY EIV + LGDG+TR GQVLE+ G +AVVQVFEGT+GIDN+ +F
Sbjct 29 PLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQF 87
> 7299652
Length=490
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVILD+VKFPK++EIV + L DG+ R GQVLE+ G +AVVQVFEGT+GID + EF
Sbjct 35 PLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEF 93
> YBR127c
Length=517
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 49/59 (83%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVIL+ VKFP+Y+EIV + L DG+ R+GQVLEI+G RA+VQVFEGT+GID ++ EF
Sbjct 37 PLVILEKVKFPRYNEIVNLTLPDGTVRQGQVLEIRGDRAIVQVFEGTSGIDVKKTTVEF 95
> Hs19913428
Length=511
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVILD VKFP+Y+EIV + L DG+ R GQVLE+ G +AVVQVFEGT+GID ++ EF
Sbjct 56 PLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEF 114
> CE04424
Length=491
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVIL+DVKFP++SEIV + L DGS R GQVLEI +AVVQVFEGT+GID + EF
Sbjct 38 PLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFEGTSGIDAKNTICEF 96
> SPAC637.05c
Length=503
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 48/59 (81%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVILD+++ P+Y+EIV ++L DGS R GQVLE+ G +A+VQVFEGT+G+D R+ +F
Sbjct 33 PLVILDNIRRPQYNEIVNLNLPDGSVRSGQVLEVAGHKAIVQVFEGTSGVDVRKTTIDF 91
> ECU10g1040
Length=477
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 48/59 (81%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVI+D+++F KY+E+V++ L DGS R+GQVLE+ G++AV+QVFEGTAGID + F
Sbjct 22 PLVIMDNIRFLKYAEMVSLTLPDGSVRQGQVLEVSGKKAVIQVFEGTAGIDVKETQVTF 80
> Hs19913426
Length=513
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLV+LD VKF +Y+EIV L DG+ R GQVLE+ G +A+VQVFEGT+GID R+ EF
Sbjct 50 PLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEF 108
> CE23245
Length=501
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 0/59 (0%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGIDNRRCHAEF 61
PLVI+ +VKFP ++EIV + L +G R GQVLE +AVVQVFEGT G+D + EF
Sbjct 50 PLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESSKNKAVVQVFEGTTGVDAKFTTCEF 108
> YDL185w
Length=1071
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 0/22 (0%)
Query 31 GQVLEIKGRRAVVQVFEGTAGI 52
G+V+ I G +A +QV+E TAG+
Sbjct 59 GEVIRIDGDKATIQVYEETAGL 80
> At1g78900
Length=623
Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query 3 PLVILDDVKFPKYSEIVTVHLGDGSTREGQVLEIKGRRAVVQVFEGTAGI 52
P+V+ D + E+V V G+++ ++G A +QV+E TAG+
Sbjct 30 PVVVADGMAGAAMYELVRV---GHDNLIGEIIRLEGDSATIQVYEETAGL 76
Lambda K H
0.323 0.142 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1178852562
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40