bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_8272_orf1 Length=61 Score E Sequences producing significant alignments: (Bits) Value Hs4507127 57.4 7e-09 Hs22052125 55.8 2e-08 7300460 52.0 3e-07 CE09232 48.5 3e-06 At4g03120 46.2 2e-05 YLR298c 41.2 5e-04 SPBP35G2.09 40.0 0.001 SPAC17A5.02c 28.5 3.3 ECU10g0290 27.7 4.7 > Hs4507127 Length=159 Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAVA 55 YC+YCD YLTH SP+ R+ H SGR+H +Y+Q + E QA + ID+ A Sbjct 5 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEE---QAQSLIDKTTA 55 > Hs22052125 Length=155 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAVA 55 YC+YC+ YLTH SP R+ H SGR+H +Y+Q ++E QA + ID+ A Sbjct 5 YCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKE---QAQSLIDKTTA 55 > 7300460 Length=145 Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAVA 55 YC+YCD YLTH SP+ R+ H +GR+H + Y+Q + E QA ID A Sbjct 5 YCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEE---QAQHLIDATTA 55 > CE09232 Length=142 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQA 53 YC+YCD +LTH SP+ R+ H GR+H + ++Q + + QA +DQ Sbjct 5 YCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMED---QAQKLVDQT 53 > At4g03120 Length=112 Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAV 54 YC+YCD YLTH SP+ R+QH +G +H Y+Q + Q + IDQ + Sbjct 5 YCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQ---QTQSLIDQRI 54 > YLR298c Length=231 Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 0/40 (0%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRE 41 YCEYC YLTH + + R+ H G+ H+ +Y++N R+ Sbjct 5 YCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYRNKARD 44 > SPBP35G2.09 Length=182 Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 0/39 (0%) Query 3 CEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRE 41 C+YC ++LTH S + R+ H +GR HI +Y+ + +E Sbjct 6 CDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQE 44 > SPAC17A5.02c Length=466 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query 7 DIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAVAMR 57 DI+L+H P G QH + + K +F+N + + +PA + V ++ Sbjct 178 DIFLSHDWPRGIEQHGDVAKLLRHK-PFFRNEVERNDLGSPALEELLVELK 227 > ECU10g0290 Length=122 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query 2 YCEYCDIYLTHSSPAGRRQHASGRRHINQKVEYFQNLLRESTFQAPAFIDQAVAMRAIQ 60 +CE+C+ L + RR H G +H + Y+ + + A + A +R I+ Sbjct 5 FCEFCNKMLLNDRLRSRRMHCGGAKHGLMRKAYYMEMFEKEDIAA----EMASILRDIK 59 Lambda K H 0.326 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1178852562 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40