bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0010_orf2
Length=251
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_015740 hypothetical protein ; K14855 ribosome assem... 315 1e-85
cpv:cgd2_330 notchless ; K14855 ribosome assembly protein 4 265 1e-70
mmu:217011 Nle1, AL022765, BC018399, MGC25690, Nle; notchless ... 260 3e-69
dre:553606 nle1, MGC110281, fc12b09, fc45f01, wu:fc12b09, wu:f... 259 5e-69
xla:380367 nle1, MGC52549, nle; notchless homolog 1; K14855 ri... 257 3e-68
ath:AT5G52820 WD-40 repeat family protein / notchless protein,... 255 8e-68
cel:W07E6.2 hypothetical protein; K14855 ribosome assembly pro... 243 7e-64
bbo:BBOV_II003080 18.m06257; WD-repeat protein; K14855 ribosom... 242 1e-63
tpv:TP04_0285 hypothetical protein; K14855 ribosome assembly p... 236 4e-62
sce:YCR072C RSA4; Rsa4p; K14855 ribosome assembly protein 4 223 5e-58
hsa:54475 NLE1, FLJ10458, Nle; notchless homolog 1 (Drosophila... 208 2e-53
pfa:PF11_0471 nucleolar preribosomal assembly protein, putativ... 200 5e-51
mmu:71227 Wdr69, 4930563E19Rik, 4933429D11Rik; WD repeat domai... 105 1e-22
hsa:401551 WDR38; WD repeat domain 38 105 2e-22
hsa:164781 WDR69, FLJ25955; WD repeat domain 69 102 1e-21
xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repe... 99.8 9e-21
mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3... 99.4 1e-20
hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPAS... 99.4 1e-20
xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat dom... 99.4 1e-20
mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protei... 97.4 4e-20
dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat d... 97.4 5e-20
ath:AT3G49660 transducin family protein / WD-40 repeat family ... 96.7 7e-20
dre:556760 wdr69, si:dkey-223n17.5, zgc:153626, zgc:153780; WD... 95.1 2e-19
cel:ZC302.2 hypothetical protein 93.6 7e-19
hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1 c... 92.8 1e-18
hsa:54554 WDR5B, FLJ11287, MGC49879; WD repeat domain 5B; K149... 92.0 2e-18
mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polym... 91.3 3e-18
xla:734892 hypothetical protein MGC130867; K03130 transcriptio... 91.3 3e-18
hsa:5048 PAFAH1B1, LIS1, LIS2, MDCR, MDS, PAFAH; platelet-acti... 90.9 4e-18
mmu:18472 Pafah1b1, LIS-1, Lis1, MGC25297, MMS10-U, Mdsh, Ms10... 90.9 4e-18
dre:406322 poc1a, wdr51a, wu:fl82d01, zgc:56055; POC1 centriol... 90.5 5e-18
cel:C14B1.4 tag-125; Temporarily Assigned Gene name family mem... 90.5 5e-18
mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38 90.1
dre:641491 taf5, MGC123129, wu:fc38g05, zgc:123129; TAF5 RNA p... 90.1 7e-18
cel:K04G11.4 hypothetical protein 89.7 8e-18
ath:AT5G67320 HOS15; HOS15 (high expression of osmotically res... 89.7 9e-18
xla:100036804 taf5, taf2d, tafii100; TAF5 RNA polymerase II, T... 89.7 1e-17
xla:379889 katnb1, MGC52971; katanin p80 (WD40-containing) sub... 89.4 1e-17
mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;... 89.4 1e-17
xla:398032 katnb1; katanin p80 (WD repeat containing) subunit B 1 89.4
sce:YBR198C TAF5, TAF90; Taf5p; K03130 transcription initiatio... 88.6 2e-17
hsa:6877 TAF5, TAF2D, TAFII100; TAF5 RNA polymerase II, TATA b... 88.2 3e-17
mmu:226182 Taf5, 6330528C20Rik, AV117817; TAF5 RNA polymerase ... 87.8 3e-17
xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centri... 87.4 4e-17
mmu:74187 Katnb1, 2410003J24Rik, KAT; katanin p80 (WD40-contai... 87.4 4e-17
xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/... 87.4 5e-17
hsa:10300 KATNB1, KAT; katanin p80 (WD repeat containing) subu... 87.4 5e-17
xla:734280 wdr69, MGC85213; WD repeat domain 69 87.0
sce:YPR178W PRP4, RNA4; Prp4p; K12662 U4/U6 small nuclear ribo... 87.0 6e-17
xla:399199 pafah1b1, lis2, mdcr, mds, pafah, pafah1b1-b; plate... 87.0 6e-17
> tgo:TGME49_015740 hypothetical protein ; K14855 ribosome assembly
protein 4
Length=527
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/251 (62%), Positives = 192/251 (76%), Gaps = 2/251 (0%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
Q LRVLS H +TQVKWSG +GYL++ASRDTT+KV + ++G LV DLKGH HWVN+LA
Sbjct 278 QCLRVLSGHRDSITQVKWSGEKEGYLYTASRDTTLKVWDCVSGRLVSDLKGHGHWVNSLA 337
Query 62 LNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL-R 120
L++D V R GPF R Q F S +EM+EAA K + I+ E +LSGSDDSTLIL +
Sbjct 338 LSTDYVTRAGPFGER-GAQPFASASEMREAARKRYEACIKTSGGEKVLSGSDDSTLILWK 396
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+ +V RM+GHQKL+N V FSP+G IAS SFDKSIRLW+G G Y++TLRGHV
Sbjct 397 HVGAPKGLVQVCRMSGHQKLVNHVAFSPDGRYIASASFDKSIRLWDGRRGVYLSTLRGHV 456
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
GPVYQLAW++DSRLLLS SGDSTLKVW AE ++LKEDLPGHADEVYA+DW+ G AASG
Sbjct 457 GPVYQLAWSSDSRLLLSASGDSTLKVWHAETRKLKEDLPGHADEVYAVDWSVVGSYAASG 516
Query 241 GKDRMLRIWRH 251
KDR+L++WR+
Sbjct 517 SKDRVLKVWRN 527
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query 100 IQECDQEALLSGSDDST--LILRRLKPNGSFEE------VGRMTGHQKLINCVCFSPNGL 151
I + QEA + ++ ST ++ R P +F+ + GH + I CV FSP+G
Sbjct 97 ITDSLQEAFDASTNPSTERVLHIRFAPLAAFKVRPLTRCSTSLEGHTEAILCVAFSPDGS 156
Query 152 MIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD-AE 210
+ASGS D ++RLW T + TL+GH V LAWA +LL S D +L++W A
Sbjct 157 QLASGSGDMTVRLWCLNTETPLRTLKGHSNWVLCLAWAPHGQLLASAGMDGSLRLWKGAS 216
Query 211 QQRLKEDLPGHADEVYAIDWAP 232
L GH V A+ W P
Sbjct 217 GDAAGIPLKGHTKPVTALAWQP 238
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D L SGS D T+ L L + GH + C+ ++P+G ++AS D S+R
Sbjct 154 DGSQLASGSGDMTVRLWCLNTETPLRT---LKGHSNWVLCLAWAPHGQLLASAGMDGSLR 210
Query 164 LWNGTTGQYMAT-LRGHVGPVYQLAWAA-----------------DSRLLLSGSGDSTLK 205
LW G +G L+GH PV LAW S +L S S DST++
Sbjct 211 LWKGASGDAAGIPLKGHTKPVTALAWQPLHLSSVCGDDSEQSRPFPSLMLASASKDSTVR 270
Query 206 VWDAEQQRLKEDLPGHADEVYAIDWA-PNGGAAASGGKDRMLRIW 249
+W+ + L GH D + + W+ G + +D L++W
Sbjct 271 LWNTTTFQCLRVLSGHRDSITQVKWSGEKEGYLYTASRDTTLKVW 315
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 95/242 (39%), Gaps = 64/242 (26%)
Query 7 LSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD 65
L H + + V +S P G L S S D TV++ T ++ LKGH++WV LA
Sbjct 139 LEGHTEAILCVAFS--PDGSQLASGSGDMTVRLWCLNTETPLRTLKGHSNWVLCLAWAPH 196
Query 66 AVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPN 125
L L S D +L RL
Sbjct 197 GQL---------------------------------------LASAGMDGSL---RLWKG 214
Query 126 GSFEEVG-RMTGHQKLINCVCFSP-----------------NGLMIASGSFDKSIRLWNG 167
S + G + GH K + + + P LM+AS S D ++RLWN
Sbjct 215 ASGDAAGIPLKGHTKPVTALAWQPLHLSSVCGDDSEQSRPFPSLMLASASKDSTVRLWNT 274
Query 168 TTGQYMATLRGHVGPVYQLAWAADSR-LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVY 226
TT Q + L GH + Q+ W+ + L + S D+TLKVWD RL DL GH V
Sbjct 275 TTFQCLRVLSGHRDSITQVKWSGEKEGYLYTASRDTTLKVWDCVSGRLVSDLKGHGHWVN 334
Query 227 AI 228
++
Sbjct 335 SL 336
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 0/76 (0%)
Query 175 TLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNG 234
+L GH + +A++ D L SGSGD T+++W + L GH++ V + WAP+G
Sbjct 138 SLEGHTEAILCVAFSPDGSQLASGSGDMTVRLWCLNTETPLRTLKGHSNWVLCLAWAPHG 197
Query 235 GAAASGGKDRMLRIWR 250
AS G D LR+W+
Sbjct 198 QLLASAGMDGSLRLWK 213
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH + + + ++P+G ASG D +R+W
Sbjct 134 RCSTSLEGHTEAILCVAFSPDGSQLASGSGDMTVRLW 170
> cpv:cgd2_330 notchless ; K14855 ribosome assembly protein 4
Length=535
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+ LS H + +T VKW+G Q Y+ S+SRD+ +KV NP TG L++DLKGHAHWVNTLALN
Sbjct 286 INTLSSHTEMITHVKWTGINQEYVVSSSRDSLIKVWNPETGQLLRDLKGHAHWVNTLALN 345
Query 64 SDAVLRRGPF--DNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL-R 120
+D + R + + + F S + AA++ + F + C E LLSGSDD+T+ L
Sbjct 346 TDYITRSACYYPTGKNLKLNFKSLQDKIAAAKQSVDNFKKRCKFERLLSGSDDNTMFLWD 405
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L NG + + R+TGH K++N V FSP+G IAS SFDK+IRLW+G +G+++A LRGHV
Sbjct 406 PLGENGR-KPIHRLTGHLKVVNHVAFSPDGRYIASASFDKTIRLWDGHSGKFIAVLRGHV 464
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
GPVY ++W+ DSRL+ S S DST+KVW ++LKEDLPGHADEVY IDW+ +G +SG
Sbjct 465 GPVYMISWSVDSRLIASASSDSTVKVWHVSSKKLKEDLPGHADEVYTIDWSIDGSRLSSG 524
Query 241 GKDRMLRIWRH 251
KD +++IWRH
Sbjct 525 SKDCIVKIWRH 535
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH+ + C FSP+ ++A+GS D ++RLW+ T L+GH+ V LAW+ DS
Sbjct 135 LQGHKDAVLCCSFSPDSNLLATGSGDTTVRLWDLLTETPEMCLKGHLNWVLTLAWSPDST 194
Query 194 LLLSGSGDSTLKVWDAEQ-QRLKEDLPGHADEVYAIDWAP 232
LL S D+ + +W+ + ++ L GH+ V ++ W P
Sbjct 195 LLASAGMDNAICIWNPSKGDKVFRKLKGHSKAVVSLAWQP 234
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query 27 LFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA-VLRRGPFDNRVQQQAFTSF 85
L + S DTTV++ + LT LKGH +WV TLA + D+ +L DN + +
Sbjct 154 LATGSGDTTVRLWDLLTETPEMCLKGHLNWVLTLAWSPDSTLLASAGMDNAICIWNPSKG 213
Query 86 AEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVC 145
++ + H + Q L T + EE +G L
Sbjct 214 DKVFRKLKGHSKAVVSLAWQPLHLMNFSAETKV-------NDGEENATESGSNNL----- 261
Query 146 FSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAA-DSRLLLSGSGDSTL 204
+ P + S S D ++++WN TTG + TL H + + W + ++S S DS +
Sbjct 262 YFPK---LISASKDFTLKIWNITTGTIINTLSSHTEMITHVKWTGINQEYVVSSSRDSLI 318
Query 205 KVWDAEQQRLKEDLPGHA 222
KVW+ E +L DL GHA
Sbjct 319 KVWNPETGQLLRDLKGHA 336
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
++L+GH V +++ DS LL +GSGD+T+++WD + + L GH + V + W+P+
Sbjct 133 SSLQGHKDAVLCCSFSPDSNLLATGSGDTTVRLWDLLTETPEMCLKGHLNWVLTLAWSPD 192
Query 234 GGAAASGGKDRMLRIW 249
AS G D + IW
Sbjct 193 STLLASAGMDNAICIW 208
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMT--GHQKLINCVCFSPNGLMIASGSFDKS 161
D L +GS D+T+ L L E M GH + + +SP+ ++AS D +
Sbjct 150 DSNLLATGSGDTTVRLWDL-----LTETPEMCLKGHLNWVLTLAWSPDSTLLASAGMDNA 204
Query 162 IRLWNGTTG-QYMATLRGHVGPVYQLAW--------AADSRL------------------ 194
I +WN + G + L+GH V LAW +A++++
Sbjct 205 ICIWNPSKGDKVFRKLKGHSKAVVSLAWQPLHLMNFSAETKVNDGEENATESGSNNLYFP 264
Query 195 -LLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWA-PNGGAAASGGKDRMLRIW 249
L+S S D TLK+W+ + L H + + + W N S +D ++++W
Sbjct 265 KLISASKDFTLKIWNITTGTIINTLSSHTEMITHVKWTGINQEYVVSSSRDSLIKVW 321
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH D V ++P+ A+G D +R+W
Sbjct 130 RCTSSLQGHKDAVLCCSFSPDSNLLATGSGDTTVRLW 166
> mmu:217011 Nle1, AL022765, BC018399, MGC25690, Nle; notchless
homolog 1 (Drosophila); K14855 ribosome assembly protein 4
Length=485
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 173/250 (69%), Gaps = 9/250 (3%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
R+L+ H Q VT ++W G G L+SAS+D T+KV G L + L+GH HWVNT+AL++
Sbjct 240 RILTGHTQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST 297
Query 65 DAVLRRGPFD---NRVQQQAFT-SFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
D LR G F+ V Q S E+KE A +N ++ E L+SGSDD TL L
Sbjct 298 DYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYN-LVRGQGPERLVSGSDDFTLFL- 355
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
P + + RMTGHQ LIN V FSP+ ++AS SFDKSI+LW+G TG+Y+A+LRGHV
Sbjct 356 -WSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 414
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
VYQ+AW+ADSRLL+SGS DSTLKVWD + Q+L DLPGHADEVYA+DW+P+G ASG
Sbjct 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASG 474
Query 241 GKDRMLRIWR 250
GKD+ LRIWR
Sbjct 475 GKDKCLRIWR 484
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 99/241 (41%), Gaps = 56/241 (23%)
Query 7 LSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD 65
L H++ V V +S P G YL S S DTTV+ + T KGH HWV +++ + D
Sbjct 110 LEGHSEAVISVAFS--PTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query 66 AVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPN 125
+ L SG + ++L P+
Sbjct 168 G---------------------------------------KKLASGCKNGQVLL--WDPS 186
Query 126 GSFEEVGR-MTGHQKLINCVCFSPNGL-----MIASGSFDKSIRLWNGTTGQYMATLRGH 179
+ VGR +TGH K I + + P + +AS S D S+R+W+ T G+ L GH
Sbjct 187 TGLQ-VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query 180 VGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV----YAIDWAPNGG 235
V L W D LL S S D T+KVW A L L GH V + D+A G
Sbjct 246 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 304
Query 236 A 236
A
Sbjct 305 A 305
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + + V FSP G +ASGS D ++R W+ +T T +GH V ++W+ D +
Sbjct 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query 194 LLLSGSGDSTLKVWDAEQ-QRLKEDLPGHADEVYAIDWA-----PNGGAAASGGKDRMLR 247
L SG + + +WD ++ L GH+ + + W P AS KD +R
Sbjct 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query 248 IW 249
+W
Sbjct 230 VW 231
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
++L GH V +A++ + L SGSGD+T++ WD + GH V +I W+P+
Sbjct 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query 234 GGAAASGGKDRMLRIW 249
G ASG K+ + +W
Sbjct 168 GKKLASGCKNGQVLLW 183
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH++ V ++ ++P G ASG D +R W
Sbjct 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFW 141
> dre:553606 nle1, MGC110281, fc12b09, fc45f01, wu:fc12b09, wu:fc45f01,
zgc:110281; notchless homolog 1 (Drosophila); K14855
ribosome assembly protein 4
Length=476
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/250 (54%), Positives = 175/250 (70%), Gaps = 9/250 (3%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
++L+ H VT VKW G G L+++S+D T+KV G + L+GHAHWVNTLAL++
Sbjct 231 KILTGHTHSVTCVKWGG--DGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALST 288
Query 65 DAVLRRGPFD---NRVQQQAFT-SFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
D VLR G F+ + Q T S E+KE A K +N+ E E L+SGSDD T+ L
Sbjct 289 DYVLRTGAFEPANATINPQDLTGSLEEIKEKALKRYNSVRGE-GHERLVSGSDDFTMFL- 346
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
P + V R+TGHQ L+N V FSP+ +IAS SFDKSI++W+G TG+Y+ +LRGHV
Sbjct 347 -WNPAEDKKPVARLTGHQALVNEVLFSPDTRLIASASFDKSIKIWDGKTGKYLNSLRGHV 405
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
GPVYQ+AW+ADSRLL+SGS DSTLKVWD + +L DLPGHADEV+A+DW+P+G ASG
Sbjct 406 GPVYQVAWSADSRLLVSGSSDSTLKVWDIKTGKLNADLPGHADEVFAVDWSPDGQRVASG 465
Query 241 GKDRMLRIWR 250
GKD+ LRIWR
Sbjct 466 GKDKCLRIWR 475
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + + V FSP G +ASGS D ++R W+ +T T RGH V +AW+ D +
Sbjct 101 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHHTSRGHTHWVLSIAWSPDGK 160
Query 194 LLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWA-----PNGGAAASGGKDRMLR 247
L SG +S + +WD +++ + L GH + + W P AS KD +R
Sbjct 161 KLASGCKNSQIFLWDPVTGKQIGKTLTGHTKWITWLCWEPLHLNPECRYLASTSKDCTIR 220
Query 248 IW 249
IW
Sbjct 221 IW 222
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query 108 LLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNG 167
L SGS D+T+ L GH + + +SP+G +ASG + I LW+
Sbjct 120 LASGSGDTTVRFWDLSTETPHHT---SRGHTHWVLSIAWSPDGKKLASGCKNSQIFLWDP 176
Query 168 TTGQYMA-TLRGHVGPVYQLAWAA-----DSRLLLSGSGDSTLKVWDAEQQRLKEDLPGH 221
TG+ + TL GH + L W + R L S S D T+++WD R + L GH
Sbjct 177 VTGKQIGKTLTGHTKWITWLCWEPLHLNPECRYLASTSKDCTIRIWDTVLGRYDKILTGH 236
Query 222 ADEVYAIDWAPNGGAAASGGKDRMLRIWR 250
V + W +G S +DR +++WR
Sbjct 237 THSVTCVKWGGDGLLYTS-SQDRTIKVWR 264
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 89/222 (40%), Gaps = 50/222 (22%)
Query 7 LSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD 65
L H + V V +S P G YL S S DTTV+ + T +GH HWV ++A + D
Sbjct 101 LEGHTEAVISVAFS--PTGKYLASGSGDTTVRFWDLSTETPHHTSRGHTHWVLSIAWSPD 158
Query 66 AVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPN 125
+ L SG +S + L P
Sbjct 159 G---------------------------------------KKLASGCKNSQIFL--WDPV 177
Query 126 GSFEEVGRMTGHQKLINCVCFSPNGL-----MIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+ +TGH K I +C+ P L +AS S D +IR+W+ G+Y L GH
Sbjct 178 TGKQIGKTLTGHTKWITWLCWEPLHLNPECRYLASTSKDCTIRIWDTVLGRYDKILTGHT 237
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHA 222
V + W D LL + S D T+KVW A+ L GHA
Sbjct 238 HSVTCVKWGGDG-LLYTSSQDRTIKVWRAKDGVQCRTLQGHA 278
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
++L GH V +A++ + L SGSGD+T++ WD + GH V +I W+P+
Sbjct 99 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHHTSRGHTHWVLSIAWSPD 158
Query 234 GGAAASGGKDRMLRIW 249
G ASG K+ + +W
Sbjct 159 GKKLASGCKNSQIFLW 174
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH + V ++ ++P G ASG D +R W
Sbjct 96 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFW 132
> xla:380367 nle1, MGC52549, nle; notchless homolog 1; K14855
ribosome assembly protein 4
Length=476
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 176/253 (69%), Gaps = 9/253 (3%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
Q ++L+ H Q VT VKW G G L+S+S+D T+K G L + L+GHAHWVNT+A
Sbjct 228 QCQKILTSHTQSVTAVKWGG--DGLLYSSSQDRTIKAWRAQDGVLCRTLQGHAHWVNTMA 285
Query 62 LNSDAVLRRGPF---DNRVQQQAFT-SFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTL 117
L++D VLR G F D V Q + S +KE A K +N ++ E L+SGSDD TL
Sbjct 286 LSTDYVLRTGAFNPADASVNPQDMSGSLEVLKEKALKRYNE-VRGQGPERLVSGSDDFTL 344
Query 118 ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLR 177
L P + + RMTGHQ LIN V FSP+ +IAS SFDKSI+LW+G TG+++ +LR
Sbjct 345 FL--WAPAEEKKPLQRMTGHQALINEVLFSPDTRIIASASFDKSIKLWDGKTGKFLTSLR 402
Query 178 GHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAA 237
GHV VYQ+AW+ADSRLL+SGS DSTLKVWD++ ++L DLPGHADEVY++DW+P+G
Sbjct 403 GHVSAVYQIAWSADSRLLVSGSSDSTLKVWDSKTKKLLIDLPGHADEVYSVDWSPDGQRV 462
Query 238 ASGGKDRMLRIWR 250
ASGGKD+ LRIWR
Sbjct 463 ASGGKDKCLRIWR 475
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + + V FSP G +ASGS D ++R W+ +T T +GH V +AW+ D +
Sbjct 101 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTSKGHTHWVLSIAWSPDGK 160
Query 194 LLLSGSGDSTLKVWDAEQ-QRLKEDLPGHADEVYAIDWA-----PNGGAAASGGKDRMLR 247
L SG +S + +WD +++ + L GH+ + + W P AS KD +R
Sbjct 161 KLASGCKNSQIFIWDPSTGKQIGKPLTGHSKWITWLCWEPLHLNPESRYLASASKDCTIR 220
Query 248 IW 249
IW
Sbjct 221 IW 222
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 93/223 (41%), Gaps = 52/223 (23%)
Query 7 LSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD 65
L H + V V +S P G YL S S DTTV+ + T KGH HWV ++A + D
Sbjct 101 LEGHTEAVISVAFS--PTGKYLASGSGDTTVRFWDLSTETPHFTSKGHTHWVLSIAWSPD 158
Query 66 AVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPN 125
+ L SG +S + + P+
Sbjct 159 G---------------------------------------KKLASGCKNSQIFI--WDPS 177
Query 126 GSFEEVGR-MTGHQKLINCVCFSPNGL-----MIASGSFDKSIRLWNGTTGQYMATLRGH 179
+ +++G+ +TGH K I +C+ P L +AS S D +IR+W+ GQ L H
Sbjct 178 -TGKQIGKPLTGHSKWITWLCWEPLHLNPESRYLASASKDCTIRIWDTVMGQCQKILTSH 236
Query 180 VGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHA 222
V + W D LL S S D T+K W A+ L L GHA
Sbjct 237 TQSVTAVKWGGDG-LLYSSSQDRTIKAWRAQDGVLCRTLQGHA 278
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query 108 LLSGSDDSTLILRRLKPNGSFEEVGRMT--GHQKLINCVCFSPNGLMIASGSFDKSIRLW 165
L SGS D+T+ L E T GH + + +SP+G +ASG + I +W
Sbjct 120 LASGSGDTTVRFWDLS-----TETPHFTSKGHTHWVLSIAWSPDGKKLASGCKNSQIFIW 174
Query 166 NGTTGQYMAT-LRGHVGPVYQLAWAA-----DSRLLLSGSGDSTLKVWDAEQQRLKEDLP 219
+ +TG+ + L GH + L W +SR L S S D T+++WD + ++ L
Sbjct 175 DPSTGKQIGKPLTGHSKWITWLCWEPLHLNPESRYLASASKDCTIRIWDTVMGQCQKILT 234
Query 220 GHADEVYAIDWAPNGGAAASGGKDRMLRIWR 250
H V A+ W + G S +DR ++ WR
Sbjct 235 SHTQSVTAVKWGGD-GLLYSSSQDRTIKAWR 264
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
++L GH V +A++ + L SGSGD+T++ WD + GH V +I W+P+
Sbjct 99 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTSKGHTHWVLSIAWSPD 158
Query 234 GGAAASGGKDRMLRIW 249
G ASG K+ + IW
Sbjct 159 GKKLASGCKNSQIFIW 174
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH + V ++ ++P G ASG D +R W
Sbjct 96 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFW 132
> ath:AT5G52820 WD-40 repeat family protein / notchless protein,
putative; K14855 ribosome assembly protein 4
Length=473
Score = 255 bits (652), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 180/250 (72%), Gaps = 8/250 (3%)
Query 1 QQALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
++++ LS H VT VKW G G +++ S+D T+K+ G L+++LKGH HW+N+L
Sbjct 231 KKSIICLSGHTLAVTCVKWGG--DGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSL 288
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
AL+++ VLR G FD+ +Q + E ++A E++ T + E L+SGSDD T+ L
Sbjct 289 ALSTEYVLRTGAFDHTGRQ--YPPNEEKQKALERYNKT--KGDSPERLVSGSDDFTMFL- 343
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+P+ S + R+TGHQ+L+N V FSP+G IAS SFDKS+RLWNG TGQ++ RGHV
Sbjct 344 -WEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
GPVYQ++W+ADSRLLLSGS DSTLK+W+ ++LK+DLPGHADEV+A+DW+P+G SG
Sbjct 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
Query 241 GKDRMLRIWR 250
GKDR+L++W+
Sbjct 463 GKDRVLKLWK 472
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
R++P + + GH + + CV FSP+G +ASGS D ++RLW+ T + T +GH
Sbjct 94 RIRPVNRCSQT--IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHK 151
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLK-EDLPGHADEVYAIDWAPNGGAA-- 237
V +AW+ D + L+SGS + W+ ++ L+ L GH + I W P ++
Sbjct 152 NWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPC 211
Query 238 ---ASGGKDRMLRIW 249
+ KD RIW
Sbjct 212 RRFVTSSKDGDARIW 226
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 50/224 (22%)
Query 5 RVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+ ++ HA+ V V +S P G L S S DTTV++ + T + KGH +WV T+A +
Sbjct 103 QTIAGHAEAVLCVSFS--PDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWS 160
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
D KH L+SGS +
Sbjct 161 PDG---------------------------KH------------LVSGSKSGEICC--WN 179
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGL-----MIASGSFDKSIRLWNGTTGQYMATLRG 178
P E +TGH+K I + + P L + S D R+W+ T + + L G
Sbjct 180 PKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSG 239
Query 179 HVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHA 222
H V + W D ++ +GS D T+K+W+ Q +L +L GH
Sbjct 240 HTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 45/168 (26%)
Query 1 QQALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNT 59
+Q + L+ H Q V V +S P G ++ SAS D +V++ N +TG V +GH
Sbjct 350 KQPKKRLTGHQQLVNHVYFS--PDGKWIASASFDKSVRLWNGITGQFVTVFRGHV----- 402
Query 60 LALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL 119
GP V Q ++++ D LLSGS DSTL +
Sbjct 403 -----------GP----VYQVSWSA-------------------DSRLLLSGSKDSTLKI 428
Query 120 RRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNG 167
++ ++ + GH + V +SP+G + SG D+ ++LW G
Sbjct 429 WEIRTKKLKQD---LPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWKG 473
> cel:W07E6.2 hypothetical protein; K14855 ribosome assembly protein
4
Length=473
Score = 243 bits (619), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 167/249 (67%), Gaps = 4/249 (1%)
Query 3 ALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLAL 62
+R LS H VT ++W G +G ++S S+D TVK+ G + +++ GHAHW+NTLAL
Sbjct 229 VVRCLSGHTASVTCLRWGG--EGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLAL 286
Query 63 NSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRL 122
N+D LR F+ + + E ++ A+ + ++ E L+SGSDD TL +
Sbjct 287 NTDYALRTSCFEPSKRCIKPDTVEECQKVAQTRYEAALEIAGGERLVSGSDDFTLFM--W 344
Query 123 KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGP 182
P + + + RMTGH +L+N V FSP+ IAS SFDKS++LW G TG+Y+A+LRGHVGP
Sbjct 345 NPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGP 404
Query 183 VYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGK 242
VYQ+AW+ADSRLL+SGS DSTLKV++ + + L DLPGH DEV+ +DW+P G SGGK
Sbjct 405 VYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGK 464
Query 243 DRMLRIWRH 251
D++L++WR
Sbjct 465 DKVLKLWRQ 473
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D L SGS D T+ + ++ H+ + C+ +SP+ IAS + I
Sbjct 116 DGRGLASGSGDQTMRIWDIELELPLHTC---KSHKSWVLCIAWSPDATKIASACKNGEIC 172
Query 164 LWNGTTGQYMA-TLRGHVGPVYQLAWAA-----DSRLLLSGSGDSTLKVWDAEQQRLKED 217
+WN TG+ + TL+ H + LAW RLL S D + +WD Q +
Sbjct 173 IWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRC 232
Query 218 LPGHADEVYAIDWAPNGGAAASGGKDRMLRIWR 250
L GH V + W G SG +DR +++WR
Sbjct 233 LSGHTASVTCLRWG-GEGLIYSGSQDRTVKMWR 264
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + + FSP+G +ASGS D+++R+W+ + T + H V +AW+ D+
Sbjct 101 IPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDAT 160
Query 194 LLLSGSGDSTLKVWDAEQ-QRLKEDLPGHADEVYAIDWA-----PNGGAAASGGKDRMLR 247
+ S + + +W+A+ +++ + L H + ++ W P AS GKD +
Sbjct 161 KIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIF 220
Query 248 IW 249
IW
Sbjct 221 IW 222
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
A++ GH PV ++ D R L SGSGD T+++WD E + H V I W+P+
Sbjct 99 ASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPD 158
Query 234 GGAAASGGKDRMLRIW 249
AS K+ + IW
Sbjct 159 ATKIASACKNGEICIW 174
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R +PGH + V + ++P+G ASG D+ +RIW
Sbjct 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIW 132
> bbo:BBOV_II003080 18.m06257; WD-repeat protein; K14855 ribosome
assembly protein 4
Length=548
Score = 242 bits (617), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 164/242 (67%), Gaps = 4/242 (1%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
Q LR LS H + ++QV WSG +LFSASRDT +KV + G LVKDLKGH HW+NTL
Sbjct 255 QCLRTLSGHTRGISQVLWSGEKSNWLFSASRDTLIKVWDTDKGGLVKDLKGHGHWINTLT 314
Query 62 LNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKH---FNTFIQECDQEALLSGSDDSTLI 118
N+ ++ GPF ++ T F ++E E+ +N FI+E QE LLSGSDD+T+
Sbjct 315 SNTYRTIKSGPFTAMNFERGRTHFENLREMIEESRVVYNKFIKESGQERLLSGSDDNTMF 374
Query 119 LRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRG 178
+ L S + + R+TGHQ+LIN V FS +G + AS SFD+++R+W G TG+Y+ TLRG
Sbjct 375 IW-LPHQQSRKPLHRLTGHQQLINHVAFSADGRLFASASFDRTVRIWCGITGRYLRTLRG 433
Query 179 HVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAA 238
H+G VY++AW+ LL+S S D+TLK+WDAE +LK DLPGHADEVY +DW+ G A
Sbjct 434 HIGRVYRIAWSCCGSLLISCSSDTTLKLWDAETGKLKFDLPGHADEVYTLDWSNCGRTVA 493
Query 239 SG 240
SG
Sbjct 494 SG 495
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 54/226 (23%)
Query 7 LSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA 66
L H++ V + +S + L + S D++V++ + TG +K LKGH +WV + + D
Sbjct 124 LEGHSESVLCMDFSADGK-LLATGSGDSSVRIWDLQTGTPIKTLKGHTNWVMCVLWSPDC 182
Query 67 V-LRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPN 125
L G D RV E + H
Sbjct 183 TRLASGGMDGRV------IIWEPDSLSSHHIT---------------------------- 208
Query 126 GSFEEVGRMTGHQKLINCVCFSP---------NGLMIASGSFDKSIRLWNGTTGQYMATL 176
++GH K + + + P ++ASGS D SI++W+ Q + TL
Sbjct 209 --------LSGHTKGVTTLAWQPLHHIDLQVRAYPLLASGSMDSSIKIWDVKVAQCLRTL 260
Query 177 RGHVGPVYQLAWAAD-SRLLLSGSGDSTLKVWDAEQQRLKEDLPGH 221
GH + Q+ W+ + S L S S D+ +KVWD ++ L +DL GH
Sbjct 261 SGHTRGISQVLWSGEKSNWLFSASRDTLIKVWDTDKGGLVKDLKGH 306
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + + C+ FS +G ++A+GS D S+R+W+ TG + TL+GH V + W+ D
Sbjct 124 LEGHSESVLCMDFSADGKLLATGSGDSSVRIWDLQTGTPIKTLKGHTNWVMCVLWSPDCT 183
Query 194 LLLSGSGDSTLKVWDAEQQRLKE-DLPGHADEVYAIDWAP---------NGGAAASGGKD 243
L SG D + +W+ + L GH V + W P ASG D
Sbjct 184 RLASGGMDGRVIIWEPDSLSSHHITLSGHTKGVTTLAWQPLHHIDLQVRAYPLLASGSMD 243
Query 244 RMLRIW 249
++IW
Sbjct 244 SSIKIW 249
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D + L +GS DS++ + L+ + + GH + CV +SP+ +ASG D +
Sbjct 139 DGKLLATGSGDSSVRIWDLQTG---TPIKTLKGHTNWVMCVLWSPDCTRLASGGMDGRVI 195
Query 164 LWN-GTTGQYMATLRGHVGPVYQLAWAADSR---------LLLSGSGDSTLKVWDAEQQR 213
+W + + TL GH V LAW LL SGS DS++K+WD + +
Sbjct 196 IWEPDSLSSHHITLSGHTKGVTTLAWQPLHHIDLQVRAYPLLASGSMDSSIKIWDVKVAQ 255
Query 214 LKEDLPGHADEVYAIDWA-PNGGAAASGGKDRMLRIW 249
L GH + + W+ S +D ++++W
Sbjct 256 CLRTLSGHTRGISQVLWSGEKSNWLFSASRDTLIKVW 292
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 0/76 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
++L GH V + ++AD +LL +GSGDS++++WD + + L GH + V + W+P+
Sbjct 122 SSLEGHSESVLCMDFSADGKLLATGSGDSSVRIWDLQTGTPIKTLKGHTNWVMCVLWSPD 181
Query 234 GGAAASGGKDRMLRIW 249
ASGG D + IW
Sbjct 182 CTRLASGGMDGRVIIW 197
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 0/37 (0%)
Query 213 RLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
R L GH++ V +D++ +G A+G D +RIW
Sbjct 119 RCSSSLEGHSESVLCMDFSADGKLLATGSGDSSVRIW 155
> tpv:TP04_0285 hypothetical protein; K14855 ribosome assembly
protein 4
Length=470
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 161/241 (66%), Gaps = 4/241 (1%)
Query 3 ALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLAL 62
+RVLS H + ++QV WS + LFS+SRDT +KV N G+LVKDLKGH HW+NTL
Sbjct 224 CVRVLSGHTKGISQVLWSAEFKERLFSSSRDTLIKVWNTNDGSLVKDLKGHGHWINTLTS 283
Query 63 NSDAVLRRGPFDNRVQQQA---FTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL 119
N + +++ GPF + F S EM + ++K + F E QE LLSGSDD+T+ +
Sbjct 284 NVNRLIKSGPFSPENFESGKCKFDSMEEMIKESKKIYEKFKVESGQERLLSGSDDNTMFI 343
Query 120 RRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGH 179
L + S + + R+TGHQ+LIN V FS NG AS SFDKSIR+W G TG+Y+ TLRGH
Sbjct 344 W-LPNSDSNKPLHRLTGHQQLINHVSFSSNGRYFASASFDKSIRIWCGITGKYLRTLRGH 402
Query 180 VGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAAS 239
+G VY++AW+ L+S S DSTLK+WDAE +LK DLPGHAD+VY +DW+ G AS
Sbjct 403 IGRVYRVAWSCRGNYLVSASSDSTLKLWDAESGKLKFDLPGHADQVYTLDWSNCGKTVAS 462
Query 240 G 240
G
Sbjct 463 G 463
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 32/191 (16%)
Query 86 AEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMT---------- 135
++ E EK+ TFI E +E + + D++ L R K + S E V ++T
Sbjct 32 SDYDEEVEKNRYTFILETSEE-IRTTLDEA---LCRSKEDFSGELVFKITYIPISVFSVR 87
Query 136 ----------GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQ 185
GH + + C+ FSP+G+ +ASGS D ++R+W+ T + T GH V
Sbjct 88 PITRCSSSLEGHTESVLCLEFSPDGVYLASGSGDTTVRIWDLATQTPIKTFTGHTNWVMS 147
Query 186 LAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP--NGGA-----AA 238
++W+ D L SG D+ + +W+ + DL GH V A+ W P N A A
Sbjct 148 ISWSPDGYTLSSGGMDNKVIIWNPKTGS-GTDLKGHTKAVTALSWQPLHNLDANEYPLLA 206
Query 239 SGGKDRMLRIW 249
SG D +RIW
Sbjct 207 SGSMDYTVRIW 217
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 56/222 (25%)
Query 10 HAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA-V 67
H + V +++S P G YL S S DTTV++ + T +K GH +WV +++ + D
Sbjct 99 HTESVLCLEFS--PDGVYLASGSGDTTVRIWDLATQTPIKTFTGHTNWVMSISWSPDGYT 156
Query 68 LRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGS 127
L G DN+V SG+D
Sbjct 157 LSSGGMDNKVIIW------------------------NPKTGSGTD-------------- 178
Query 128 FEEVGRMTGHQKLINCVCFSP-------NGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+ GH K + + + P ++ASGS D ++R+WN + + L GH
Sbjct 179 ------LKGHTKAVTALSWQPLHNLDANEYPLLASGSMDYTVRIWNVKSFVCVRVLSGHT 232
Query 181 GPVYQLAWAADSR-LLLSGSGDSTLKVWDAEQQRLKEDLPGH 221
+ Q+ W+A+ + L S S D+ +KVW+ L +DL GH
Sbjct 233 KGISQVLWSAEFKERLFSSSRDTLIKVWNTNDGSLVKDLKGH 274
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D L SGS D+T+ R+ + + TGH + + +SP+G ++SG D +
Sbjct 111 DGVYLASGSGDTTV---RIWDLATQTPIKTFTGHTNWVMSISWSPDGYTLSSGGMDNKVI 167
Query 164 LWNGTTGQYMATLRGHVGPVYQLAW-------AADSRLLLSGSGDSTLKVWDAEQQRLKE 216
+WN TG L+GH V L+W A + LL SGS D T+++W+ +
Sbjct 168 IWNPKTGS-GTDLKGHTKAVTALSWQPLHNLDANEYPLLASGSMDYTVRIWNVKSFVCVR 226
Query 217 DLPGHADEVYAIDWAPNGGAAA-SGGKDRMLRIW 249
L GH + + W+ S +D ++++W
Sbjct 227 VLSGHTKGISQVLWSAEFKERLFSSSRDTLIKVW 260
> sce:YCR072C RSA4; Rsa4p; K14855 ribosome assembly protein 4
Length=515
Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/252 (45%), Positives = 161/252 (63%), Gaps = 15/252 (5%)
Query 6 VLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLT-GALVKDLKGHAHWVNTLALNS 64
+S H V+ VKW G QG L+S S D TV+V + + G + LK HAHWVN L+L++
Sbjct 273 TMSGHTNSVSCVKWGG--QGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLST 330
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQEC-----DQEALLSGSDDSTLIL 119
D LR G FD+ ++ + +EA +K + + C +E +++ SDD T+ L
Sbjct 331 DYALRIGAFDHTGKKPSTP-----EEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFL 385
Query 120 RRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGH 179
P S + + RMTGHQKL+N V FSP+G I S SFD SI+LW+G G++++T RGH
Sbjct 386 --WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGH 443
Query 180 VGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAAS 239
V VYQ+AW++D RLL+S S D+TLKVWD ++L DLPGH DEVY +DW+ +G S
Sbjct 444 VASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCS 503
Query 240 GGKDRMLRIWRH 251
GGKD+M+R+W H
Sbjct 504 GGKDKMVRLWTH 515
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMA-TLRGHVGPVYQLAW---- 188
+ GH + CV +SP+G +IA+GS D +IRLW+ +GQ + LRGH + L+W
Sbjct 182 LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIH 241
Query 189 ---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRM 245
L S S D T+K+WD + + + GH + V + W G SG DR
Sbjct 242 LVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRT 300
Query 246 LRIW 249
+R+W
Sbjct 301 VRVW 304
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query 134 MTGHQKLINCVCFSPN-GLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADS 192
+ GH I C F+P+ + +G+ D + R+W+ T M TL+GH V ++W+ D
Sbjct 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query 193 RLLLSGSGDSTLKVWDAEQ-QRLKEDLPGHADEVYAIDWAP-------NGGAAASGGKDR 244
++ +GS D+T+++WD + Q L + L GH+ + ++ W P + AS KD
Sbjct 199 EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query 245 MLRIW 249
++IW
Sbjct 259 TIKIW 263
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query 174 ATLRGHVGPVYQLAWAA-DSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
+ + GH + A+A S +++G+GD+T ++WD + Q L GH + V + W+P
Sbjct 137 SAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSP 196
Query 233 NGGAAASGGKDRMLRIW 249
+G A+G D +R+W
Sbjct 197 DGEVIATGSMDNTIRLW 213
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 88/228 (38%), Gaps = 54/228 (23%)
Query 27 LFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVLRRGPFDNRVQQQAFTSFA 86
+ + + D T ++ + T + LKGH +WV ++ + D
Sbjct 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG-------------------- 198
Query 87 EMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCF 146
E + +GS D+T+ L K + R GH K I + +
Sbjct 199 -------------------EVIATGSMDNTIRLWDPKSGQCLGDALR--GHSKWITSLSW 237
Query 147 SPNGLM-------IASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGS 199
P L+ +AS S D +I++W+ + T+ GH V + W LL SGS
Sbjct 238 EPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGS 296
Query 200 GDSTLKVWDAEQQ-RLKEDLPGHADEV----YAIDWAPNGGAAASGGK 242
D T++VWD Q R L HA V + D+A GA GK
Sbjct 297 HDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGK 344
> hsa:54475 NLE1, FLJ10458, Nle; notchless homolog 1 (Drosophila);
K14855 ribosome assembly protein 4
Length=193
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 137/196 (69%), Gaps = 7/196 (3%)
Query 60 LALNSDAVLRRGPFD---NRVQQQAFT-SFAEMKEAAEKHFNTFIQECDQEALLSGSDDS 115
+AL++D LR G F+ V Q S E+KE A +N ++ E L+SGSDD
Sbjct 1 MALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYN-LVRGQGPERLVSGSDDF 59
Query 116 TLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
TL L P + + RMTGHQ LIN V FSP+ ++AS SFDKSI+LW+G TG+Y+A+
Sbjct 60 TLFL--WSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLAS 117
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
LRGHV VYQ+AW+ADSRLL+SGS DSTLKVWD + Q+L DLPGHADEVYA+DW+P+G
Sbjct 118 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQ 177
Query 236 AAASGGKDRMLRIWRH 251
ASGGKD+ LRIWR
Sbjct 178 RVASGGKDKCLRIWRR 193
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
L L H V Q+ WS + L S S D+T+KV + L DL GHA V + +
Sbjct 115 LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWS 173
Query 64 SD 65
D
Sbjct 174 PD 175
> pfa:PF11_0471 nucleolar preribosomal assembly protein, putative;
K14855 ribosome assembly protein 4
Length=645
Score = 200 bits (508), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 162/304 (53%), Gaps = 61/304 (20%)
Query 5 RVLSFHAQPVTQVKWSG--GPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLAL 62
++L+ H+ +T + WSG L+S+SRDTT+K+ N G L+ + KGH HWVN L L
Sbjct 346 QILTGHSDTITCILWSGRDTENSTLYSSSRDTTIKIWNVNEGTLIYNFKGHKHWVNCLTL 405
Query 63 NSDAVLRRGPF--DNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
NS+ +L+ G + D + + ++ E + K+F + E ++SGSDD TL L
Sbjct 406 NSERLLKNGIYNLDVIINKINIVNYIEKSKNIMKNF---FKNQHHEKIVSGSDDGTLFLI 462
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
N ++ R+ GHQK + FSPNG MI S SFDKSIR+W+ G+++A RGHV
Sbjct 463 ECLQNKEYKNT-RLLGHQKPVIHAQFSPNGKMIVSSSFDKSIRVWSAADGKFLAVYRGHV 521
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVW--------------DAEQQRLKE---------- 216
GPVY++AW+ D+ +S S DSTLK+W + E+++ KE
Sbjct 522 GPVYKVAWSIDNNFFVSCSQDSTLKLWKVSHLFQQNEITQSNIEKKQEKEQIKNQADNQK 581
Query 217 -----------------------------DLPGHADEVYAIDWAPNGGAAASGGKDRMLR 247
DLPGHAD VYA+DW+ +G ASGGKD++L+
Sbjct 582 DNQKDNQANNQKDNQQKNQNNKKIKTLLVDLPGHADAVYAVDWSNDGKFVASGGKDKVLK 641
Query 248 IWRH 251
+W H
Sbjct 642 LWSH 645
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 0/99 (0%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH I C+ FSPN +A+GS D ++RLW+ T +ATL H V + ++ D++
Sbjct 121 LPGHTSSILCLAFSPNSSHLATGSGDNTVRLWDIYTQTPIATLNDHKSWVLVVLFSPDNK 180
Query 194 LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
L + DS + +++ +L L GH EV + + P
Sbjct 181 FLATAGMDSNVCIYETHTGKLLNTLTGHKKEVTTLCFEP 219
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPN 233
+TL GH + LA++ +S L +GSGD+T+++WD Q L H V + ++P+
Sbjct 119 STLPGHTSSILCLAFSPNSSHLATGSGDNTVRLWDIYTQTPIATLNDHKSWVLVVLFSPD 178
Query 234 GGAAASGGKDRMLRIWR 250
A+ G D + I+
Sbjct 179 NKFLATAGMDSNVCIYE 195
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 25/243 (10%)
Query 1 QQALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
Q + L+ H V V +S + +L +A D+ V + TG L+ L GH V TL
Sbjct 157 QTPIATLNDHKSWVLVVLFSPDNK-FLATAGMDSNVCIYETHTGKLLNTLTGHKKEVTTL 215
Query 61 ALNSDAVLRRGPFDNRV---QQQAFTSFAEMKEAAEKHFNTFIQECDQ-EALLSGSDDST 116
+L+ +N V ++ S E+ ++ + N I++ D+ + +++G D+
Sbjct 216 CFEPLHLLKEEDIENNVDHVNKRKINSNEEIDQS--DNANKKIKKNDENDVIINGKDNYP 273
Query 117 LILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLM---------------IASGSFDKS 161
+ K + E + K + SPN +AS D S
Sbjct 274 SGQHKDKMMPTEGETTNSKNNSKNNSKRNISPNNTQNNTTSTNCSYFVRSRLASAGKDGS 333
Query 162 IRLWNGTTGQYMATLRGHVGPVYQLAWA---ADSRLLLSGSGDSTLKVWDAEQQRLKEDL 218
IR+ N + L GH + + W+ ++ L S S D+T+K+W+ + L +
Sbjct 334 IRINNILSNSVDQILTGHSDTITCILWSGRDTENSTLYSSSRDTTIKIWNVNEGTLIYNF 393
Query 219 PGH 221
GH
Sbjct 394 KGH 396
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query 108 LLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNG 167
L +GS D+T+ RL + + + H+ + V FSP+ +A+ D ++ ++
Sbjct 140 LATGSGDNTV---RLWDIYTQTPIATLNDHKSWVLVVLFSPDNKFLATAGMDSNVCIYET 196
Query 168 TTGQYMATLRGHVGPVYQLAW 188
TG+ + TL GH V L +
Sbjct 197 HTGKLLNTLTGHKKEVTTLCF 217
> mmu:71227 Wdr69, 4930563E19Rik, 4933429D11Rik; WD repeat domain
69
Length=310
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 21/247 (8%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+VL H P+T V + ++ + S D T KV + +G + L+GH + V +A N
Sbjct 85 FKVLRAHILPLTNVALNKAGSCFI-TGSYDRTCKVWDTASGEELHTLEGHKNVVYAIAFN 143
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+ P+ + T E + FN D +L+GS D T +L
Sbjct 144 N-------PYG-----KVHTLIGHCAEISSALFNW-----DCSLILTGSMDKTCMLWD-A 185
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
+G + V +TGH I CF G +IA+ S D + R++N TT + + L GH G +
Sbjct 186 TSGKY--VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCVTKLEGHEGEI 243
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
++++ LL+GS D T ++WD + + + L GH DE+++ + G +G KD
Sbjct 244 SKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 303
Query 244 RMLRIWR 250
RIWR
Sbjct 304 NSCRIWR 310
> hsa:401551 WDR38; WD repeat domain 38
Length=314
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 17/255 (6%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
Q L L H PV ++S P G+LF SAS D TV++ + ++ LKGH V T+
Sbjct 54 QLLWRLGGHTGPVKFCRFS--PDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETV 111
Query 61 ALNSDA-VLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECD----QEALLSGSDDS 115
+ + D+ L G +D RV S +M H ++ IQ D L +GS DS
Sbjct 112 SFSPDSRQLASGGWDKRVMLWDVQS-GQMLRLLVGHRDS-IQSSDFSPTVNCLATGSWDS 169
Query 116 TL---ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQY 172
T+ LR + P S + + GH I+C+C+S +GL+ ASGS+DK+I +W TT
Sbjct 170 TVHIWDLRMVTPAVSHQA---LEGHSANISCLCYSASGLL-ASGSWDKTIHIWKPTTSSL 225
Query 173 MATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
+ L+GHV V +A++ D L S +KVWD + E L G D + + P
Sbjct 226 LIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTP 285
Query 233 NGGAAASGGKDRMLR 247
+G SG D+ R
Sbjct 286 DGKILVSGAADQTRR 300
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D + LL+GS+D + + S + + R+ GH + FSP+G + AS S D ++R
Sbjct 32 DGQMLLTGSEDGCVYGWETR---SGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVR 88
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
LW+ + + L+GH V ++++ DSR L SG D + +WD + ++ L GH D
Sbjct 89 LWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRD 148
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
+ + D++P A+G D + IW
Sbjct 149 SIQSSDFSPTVNCLATGSWDSTVHIW 174
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query 115 STLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMA 174
+TL +RR+K G H +N FSP+G M+ +GS D + W +GQ +
Sbjct 7 ATLAVRRVKFFGQ---------HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLW 57
Query 175 TLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNG 234
L GH GPV ++ D L S S D T+++WD + + L GH V + ++P+
Sbjct 58 RLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDS 117
Query 235 GAAASGGKDRMLRIW 249
ASGG D+ + +W
Sbjct 118 RQLASGGWDKRVMLW 132
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GHQ+ + V FSP+ +ASG +DK + LW+ +GQ + L GH + ++
Sbjct 101 LKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVN 160
Query 194 LLLSGSGDSTLKVWDAEQQR---LKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIWR 250
L +GS DST+ +WD + L GH+ + + ++ +G ASG D+ + IW+
Sbjct 161 CLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASG-LLASGSWDKTIHIWK 219
> hsa:164781 WDR69, FLJ25955; WD repeat domain 69
Length=415
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 19/253 (7%)
Query 8 SFHAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS-- 64
+F V S PQ L + S DTT K+ + G V L+GH+ + +L+ N+
Sbjct 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query 65 DAVLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTL 117
D ++ G FD+ V ++ E + FN D +L+GS D T
Sbjct 232 DRIIT-GSFDHTVVVWDADTGRKVNILIGHCAEISSASFNW-----DCSLILTGSMDKTC 285
Query 118 ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLR 177
L NG V +TGH I CF G +IA+ S D + R+++ T + +A L
Sbjct 286 KLWD-ATNGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE 342
Query 178 GHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAA 237
GH G + ++++ LL+GS D T ++WDA+ + + L GH DE+++ + G
Sbjct 343 GHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIV 402
Query 238 ASGGKDRMLRIWR 250
+G KD RIWR
Sbjct 403 ITGSKDNTCRIWR 415
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query 107 ALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFS-PNGLMIASGSFDKSIRLW 165
++GS D T +L S EE+ + GH+ ++ + F+ P G IA+GSFDK+ +LW
Sbjct 106 CFITGSYDRTC---KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ TG+ T RGH + L++ S L+ +GS D+T K+WD + L GH+ E+
Sbjct 163 SVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEI 222
Query 226 YAIDWAPNGGAAASGGKDRMLRIW 249
++ + +G +G D + +W
Sbjct 223 ISLSFNTSGDRIITGSFDHTVVVW 246
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query 106 EALLSGS--DDSTLILRRLK------PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGS 157
E LL+ S + L+++RL+ N +F + H + V + +G +GS
Sbjct 52 EPLLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGS 111
Query 158 FDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAAD-SRLLLSGSGDSTLKVWDAEQQRLKE 216
+D++ +LW+ +G+ + TL GH VY +A+ + +GS D T K+W E +
Sbjct 112 YDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query 217 DLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
GH E+ + + P A+G D ++W
Sbjct 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
> xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+KPN + + + GH K ++ V FSPNG +AS S DK I++W G++ T+ GH
Sbjct 31 VKPNYTLKFT--LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query 182 PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGG 241
+ +AW++DS LL+S S D TLK+WD + + L GH++ V+ ++ P SG
Sbjct 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query 242 KDRMLRIW 249
D +RIW
Sbjct 149 FDESVRIW 156
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 46/248 (18%)
Query 6 VLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
L+ H + V+ VK+S P G +L S+S D +K+ G K + GH ++ +A +S
Sbjct 40 TLAGHTKAVSSVKFS--PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
D+ L L+S SDD TL + +
Sbjct 98 DSNL---------------------------------------LVSASDDKTLKIWDV-- 116
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
S + + + GH + C F+P +I SGSFD+S+R+W+ TG+ + TL H PV
Sbjct 117 -SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query 185 QLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ + D L++S S D ++WD A Q LK + V + ++PNG + D
Sbjct 176 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query 244 RMLRIWRH 251
L++W +
Sbjct 236 NTLKLWDY 243
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 23/260 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ +S H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 81 KTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN D ++S S D
Sbjct 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYDG- 193
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 194 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
H Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHP 311
Query 233 NGGAAASGG--KDRMLRIWR 250
AS D+ +++W+
Sbjct 312 TENIIASAALENDKTIKLWK 331
> mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3;
WD repeat domain 5; K14963 COMPASS component SWD3
Length=334
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+KPN + + + GH K ++ V FSPNG +AS S DK I++W G++ T+ GH
Sbjct 31 VKPNYALKFT--LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query 182 PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGG 241
+ +AW++DS LL+S S D TLK+WD + + L GH++ V+ ++ P SG
Sbjct 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query 242 KDRMLRIW 249
D +RIW
Sbjct 149 FDESVRIW 156
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 46/248 (18%)
Query 6 VLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
L+ H + V+ VK+S P G +L S+S D +K+ G K + GH ++ +A +S
Sbjct 40 TLAGHTKAVSSVKFS--PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
D+ L L+S SDD TL + +
Sbjct 98 DSNL---------------------------------------LVSASDDKTLKIWDV-- 116
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
S + + + GH + C F+P +I SGSFD+S+R+W+ TG+ + TL H PV
Sbjct 117 -SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query 185 QLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ + D L++S S D ++WD A Q LK + V + ++PNG + D
Sbjct 176 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query 244 RMLRIWRH 251
L++W +
Sbjct 236 NTLKLWDY 243
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 23/260 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ +S H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 81 KTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN D ++S S D
Sbjct 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYDG- 193
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 194 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
GH Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query 233 NGGAAASGG--KDRMLRIWR 250
AS D+ +++W+
Sbjct 312 TENIIASAALENDKTIKLWK 331
> hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPASS
component SWD3
Length=334
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+KPN + + + GH K ++ V FSPNG +AS S DK I++W G++ T+ GH
Sbjct 31 VKPNYALKFT--LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query 182 PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGG 241
+ +AW++DS LL+S S D TLK+WD + + L GH++ V+ ++ P SG
Sbjct 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query 242 KDRMLRIW 249
D +RIW
Sbjct 149 FDESVRIW 156
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 46/248 (18%)
Query 6 VLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
L+ H + V+ VK+S P G +L S+S D +K+ G K + GH ++ +A +S
Sbjct 40 TLAGHTKAVSSVKFS--PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
D+ L L+S SDD TL + +
Sbjct 98 DSNL---------------------------------------LVSASDDKTLKIWDV-- 116
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
S + + + GH + C F+P +I SGSFD+S+R+W+ TG+ + TL H PV
Sbjct 117 -SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query 185 QLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ + D L++S S D ++WD A Q LK + V + ++PNG + D
Sbjct 176 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query 244 RMLRIWRH 251
L++W +
Sbjct 236 NTLKLWDY 243
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 23/260 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ +S H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 81 KTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN D ++S S D
Sbjct 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYDG- 193
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 194 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
GH Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query 233 NGGAAASGG--KDRMLRIWR 250
AS D+ +++W+
Sbjct 312 TENIIASAALENDKTIKLWK 331
> xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat domain
5; K14963 COMPASS component SWD3
Length=334
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+KPN + + + GH K ++ V FSPNG +AS S DK I++W G++ T+ GH
Sbjct 31 VKPNYTLKFT--LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query 182 PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGG 241
+ +AW++DS LL+S S D TLK+WD + + L GH++ V+ ++ P SG
Sbjct 89 GISDVAWSSDSNLLVSASDDKTLKIWDISSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query 242 KDRMLRIW 249
D +RIW
Sbjct 149 FDESVRIW 156
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 46/248 (18%)
Query 6 VLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
L+ H + V+ VK+S P G +L S+S D +K+ G K + GH ++ +A +S
Sbjct 40 TLAGHTKAVSSVKFS--PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
D+ L L+S SDD TL + +
Sbjct 98 DSNL---------------------------------------LVSASDDKTLKIWDI-- 116
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
S + + + GH + C F+P +I SGSFD+S+R+W+ TG+ + TL H PV
Sbjct 117 -SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query 185 QLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ + D L++S S D ++WD A Q LK + V + ++PNG + D
Sbjct 176 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query 244 RMLRIWRH 251
L++W +
Sbjct 236 NTLKLWDY 243
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 23/260 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ +S H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 81 KTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDISSGKCLKTLKGHSNYVFCCNFNP 139
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN D ++S S D
Sbjct 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYDG- 193
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 194 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
H Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHP 311
Query 233 NGGAAASGG--KDRMLRIWR 250
AS D+ +++W+
Sbjct 312 TENIIASAALENDKTIKLWK 331
> mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protein
homolog A (Chlamydomonas)
Length=405
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query 108 LLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNG 167
L SGS DSTL++ +KP R TGH+ + CV FSP+G ++ASGS DK++R+W
Sbjct 34 LASGSMDSTLMIWHMKPQS---RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVP 90
Query 168 TTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYA 227
R H V + + +D + L++ S D T+KVW +QR L H + V
Sbjct 91 NVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRC 150
Query 228 IDWAPNGGAAASGGKDRMLRIW 249
++P+G S D+ +++W
Sbjct 151 AKFSPDGRLIVSASDDKTVKLW 172
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 13/247 (5%)
Query 10 HAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H VT V +S P G+L S SRD TV++ P + H V ++ SD
Sbjct 60 HKDAVTCVNFS--PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query 69 RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQEC-----DQEALLSGSDDSTLILRRLK 123
D++ + T + +H N C D ++S SDD T+ +L
Sbjct 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWV--RCAKFSPDGRLIVSASDDKTV---KLW 172
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
S E + H + V F P+G IA+ D ++++W+ T + + + H V
Sbjct 173 DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV 232
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
L++ L++ S DSTLK+ D + RL L GH + ++ G ASGG D
Sbjct 233 NALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query 244 RMLRIWR 250
+ +W+
Sbjct 293 EQVMVWK 299
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 0/114 (0%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH+ + CV FS N +ASGS D ++ +W+ GH V + ++ LL
Sbjct 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query 196 LSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
SGS D T+++W + H V ++ + +G + + D+ +++W
Sbjct 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 0/74 (0%)
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
+GH V + ++ +++ L SGS DSTL +W + Q GH D V ++++P+G
Sbjct 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query 236 AAASGGKDRMLRIW 249
ASG +D+ +RIW
Sbjct 75 LLASGSRDKTVRIW 88
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
Query 210 EQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
E L+ GH D V +D++ N ASG D L IW
Sbjct 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIW 46
> dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+KPN + + + GH K ++ V FSP+G +AS S DK I++W G++ T+ GH
Sbjct 31 VKPNYTLKFT--LAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query 182 PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGG 241
+ +AW++DS LL+S S D TLK+WD + + L GH++ V+ ++ P SG
Sbjct 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query 242 KDRMLRIW 249
D +RIW
Sbjct 149 FDESVRIW 156
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 46/248 (18%)
Query 6 VLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
L+ H + V+ VK+S P G +L S+S D +K+ G K + GH ++ +A +S
Sbjct 40 TLAGHTKAVSSVKFS--PSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
D+ L L+S SDD TL + +
Sbjct 98 DSNL---------------------------------------LVSASDDKTLKIWDV-- 116
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
S + + + GH + C F+P +I SGSFD+S+R+W+ TG+ + TL H PV
Sbjct 117 -SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query 185 QLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ + D L++S S D ++WD A Q LK + V + ++PNG + D
Sbjct 176 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query 244 RMLRIWRH 251
L++W +
Sbjct 236 NTLKLWDY 243
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 23/260 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ +S H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 81 KTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN D ++S S D
Sbjct 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYDG- 193
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 194 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
GH Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query 233 NGGAAASGG--KDRMLRIWR 250
AS D+ +++W+
Sbjct 312 TENIIASAALENDKTIKLWK 331
> ath:AT3G49660 transducin family protein / WD-40 repeat family
protein; K14963 COMPASS component SWD3
Length=317
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 31/257 (12%)
Query 10 HAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA-VL 68
H ++ V +S + ++ SAS D T+K+ + TG+L+K L GH ++ + N + ++
Sbjct 70 HENGISDVAFSSDAR-FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query 69 RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSF 128
G FD V+ T+ +K D + + D +LI+ + S+
Sbjct 129 VSGSFDETVRIWDVTTGKCLK--------VLPAHSDPVTAVDFNRDGSLIV-----SSSY 175
Query 129 EEVGRM----TGH--QKLIN-------CVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
+ + R+ TGH + LI+ V FSPNG I G+ D ++RLWN ++ +++ T
Sbjct 176 DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKT 235
Query 176 LRGHVGPVYQLAWA---ADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
GHV Y ++ A + + ++SGS D+ + +W+ ++L + L GH + V + P
Sbjct 236 YTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHP 295
Query 233 NGGAAASGGKDRMLRIW 249
ASG D+ +RIW
Sbjct 296 TENLIASGSLDKTVRIW 312
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 0/121 (0%)
Query 129 EEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAW 188
E V TGH+ I+ V FS + I S S DK+++LW+ TG + TL GH + + +
Sbjct 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query 189 AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRI 248
S +++SGS D T+++WD + + LP H+D V A+D+ +G S D + RI
Sbjct 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query 249 W 249
W
Sbjct 182 W 182
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 49/251 (19%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKV-----LNPLTGALVKDLKGHAHWVNT 59
+ L+ H + V+ VK+S + L SAS D T++ +N V++ GH + ++
Sbjct 18 QTLTSHNRAVSSVKFSSDGR-LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query 60 LALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL 119
+A +SDA ++S SDD TL L
Sbjct 77 VAFSSDARF---------------------------------------IVSASDDKTLKL 97
Query 120 RRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGH 179
++ GS + + GH CV F+P MI SGSFD+++R+W+ TTG+ + L H
Sbjct 98 WDVE-TGSL--IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAH 154
Query 180 VGPVYQLAWAADSRLLLSGSGDSTLKVWDA-EQQRLKEDLPGHADEVYAIDWAPNGGAAA 238
PV + + D L++S S D ++WD+ +K + V + ++PNG
Sbjct 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query 239 SGGKDRMLRIW 249
G D LR+W
Sbjct 215 VGTLDNTLRLW 225
> dre:556760 wdr69, si:dkey-223n17.5, zgc:153626, zgc:153780;
WD repeat domain 69
Length=418
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
R L H P+T V ++ ++ + S D T K+ + +G + L+GH + V +A N
Sbjct 85 FRALQAHILPLTNVAFNKSGSCFI-TGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAE-KHFNTFIQECDQEALLSGSDDSTLILR-- 120
+ P+ ++V +F ++ A K F TF + L+ + STL+
Sbjct 144 N-------PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGS 196
Query 121 -----RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
+L S EEV + GH I +CF+ G + +GSFD + LW+ +G+ +
Sbjct 197 MDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHV 256
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
L GH G + + + D L+ + S D + KVWDAE + L GH DEV + + G
Sbjct 257 LSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ 316
Query 236 AAASGGKDRMLRIW 249
A+ D R++
Sbjct 317 LIATASADGTSRVF 330
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
+ L L H V + ++ + + S D T K+ + TG +GH + LA
Sbjct 125 EELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA 184
Query 62 LNSDAVL-RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQ---EALLSGSDDSTL 117
N + L G D + S E+ A HF I C + L++GS D T
Sbjct 185 FNPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHFAEIISLCFNTTGDRLVTGSFDHTA 243
Query 118 ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLR 177
IL + P+G +V ++GH+ I+CV F+ + +IA+ S DKS ++W+ GQ +ATL
Sbjct 244 ILWDV-PSG--RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL 300
Query 178 GHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAA 237
GH V + + +L+ + S D T +V+ + + L GH E+ + + G
Sbjct 301 GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV 360
Query 238 ASGGKDRMLRIW 249
+ D+ R+W
Sbjct 361 LTASVDKTSRVW 372
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query 27 LFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD-AVLRRGPFDNRVQ------- 78
L + S D T + + +G V L GH ++ + N D +++ D +
Sbjct 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG 293
Query 79 QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQ 138
Q T E + FN Q + + S D T R+ +F+ + ++ GH+
Sbjct 294 QCLATLLGHNDEVLDVCFNYTGQ-----LIATASADGT---SRVFSTDTFQCLCQLEGHK 345
Query 139 KLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSG 198
I+ VCF+ G + + S DK+ R+W TG + L GH ++ A+ + +++G
Sbjct 346 GEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITG 405
Query 199 S 199
+
Sbjct 406 N 406
> cel:ZC302.2 hypothetical protein
Length=501
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
L+ L+ H + WS Q ++ SAS DTTVK+ + ++GA ++ ++GH ++V + N
Sbjct 248 LQTLASHQLGINDFSWSSNSQ-FIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFN 306
Query 64 S-DAVLRRGPFDNRVQQQAFTSFAEMK--EAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
+++ FD V+ F + +K A + D + + S D + +
Sbjct 307 PQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVW 366
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+GS + T H + VCFSPNG + S D S++LW+ + + GH
Sbjct 367 DAA-SGSCLKTLVDTDHAP-VTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHK 424
Query 181 GPVYQLAWAADSRL---LLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAA 237
Y L L ++SGS D + VW + +++ + L GH V A D P
Sbjct 425 NKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNII 484
Query 238 ASGG--KDRMLRIWR 250
ASGG D ++RIWR
Sbjct 485 ASGGLEPDNVIRIWR 499
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query 100 IQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFD 159
IQ ++ + S+ I ++ + NG F V ++GH K ++ + FS G + +GS D
Sbjct 176 IQVAPPRDPVAPTTSSSGITKKPE-NGEFSLVKTISGHTKSVSVIKFSYCGKYLGTGSAD 234
Query 160 KSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLP 219
K I++WN Y+ TL H + +W+++S+ + S S D+T+K++D +
Sbjct 235 KQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMR 294
Query 220 GHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
GH + V+ + P AS G D +R+W
Sbjct 295 GHTNYVFCCSFNPQSSLIASAGFDETVRVW 324
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query 45 ALVKDLKGHAHWVNTLALN-SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHF--NTFIQ 101
+LVK + GH V+ + + L G D +++ ++ A N F
Sbjct 204 SLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSW 263
Query 102 ECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKS 161
+ + + S SDD+T+ + + M GH + C F+P +IAS FD++
Sbjct 264 SSNSQFIASASDDTTVKIFDVISGACLRT---MRGHTNYVFCCSFNPQSSLIASAGFDET 320
Query 162 IRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDL--P 219
+R+W+ TG + + H P+ +++ D + + S D ++VWDA + L
Sbjct 321 VRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDT 380
Query 220 GHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
HA + + ++PNG S D L++W
Sbjct 381 DHAPVTF-VCFSPNGKYLLSAQLDSSLKLW 409
> hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1
centriolar protein homolog A (Chlamydomonas)
Length=359
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
+ + L SGS DS L++ +KP R TGH+ + CV FSP+G ++ASGS DK++R
Sbjct 30 NTKQLASGSMDSCLMVWHMKPQS---RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
+W R H V + + +D + ++ S D T+KVW +Q+ L H +
Sbjct 87 IWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHIN 146
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V ++P+G S D+ +++W
Sbjct 147 WVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 13/247 (5%)
Query 10 HAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H VT V +S P G+L S SRD TV++ P + H V ++ SD
Sbjct 60 HKDAVTCVNFS--PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query 69 RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQEC-----DQEALLSGSDDSTLILRRLK 123
D++ + T + + +H N C D ++S SDD T+ +L
Sbjct 118 FVTASDDKTVKVWATHRQKFLFSLSQHINWV--RCAKFSPDGRLIVSASDDKTV---KLW 172
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
S E V H + V F P+G IA+ D ++++W+ T + + + H V
Sbjct 173 DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
L++ L++ S DSTLK+ D + RL L GH + ++ G ASGG D
Sbjct 233 NGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query 244 RMLRIWR 250
+ +W+
Sbjct 293 EQVMVWK 299
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 0/114 (0%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH+ + CV FS N +ASGS D + +W+ GH V + ++ LL
Sbjct 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query 196 LSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
SGS D T+++W + H V ++ + +G + + D+ +++W
Sbjct 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 0/74 (0%)
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
+GH V + ++ +++ L SGS DS L VW + Q GH D V ++++P+G
Sbjct 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query 236 AAASGGKDRMLRIW 249
ASG +D+ +RIW
Sbjct 75 LLASGSRDKTVRIW 88
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 0/41 (0%)
Query 209 AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
AE L+ GH D V +D++ N ASG D L +W
Sbjct 6 AEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVW 46
> hsa:54554 WDR5B, FLJ11287, MGC49879; WD repeat domain 5B; K14963
COMPASS component SWD3
Length=330
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query 105 QEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRL 164
Q AL S ++ S + + N ++ + GH + ++ V FSPNG +AS S D+ I +
Sbjct 12 QLALSSSANQS----KEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIII 67
Query 165 WNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADE 224
W G+Y TL GH + +AW++DS L+S S D TLK+WD + + L GH++
Sbjct 68 WGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNY 127
Query 225 VYAIDWAPNGGAAASGGKDRMLRIWR 250
V+ ++ P SG D ++IW
Sbjct 128 VFCCNFNPPSNLIISGSFDETVKIWE 153
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 15/250 (6%)
Query 10 HAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H + V+ VK+S P G +L S+S D + + G K L GH ++ +A +SD+
Sbjct 40 HTEAVSSVKFS--PNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSR 97
Query 69 RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECD----QEALLSGSDDSTLILRRLKP 124
D++ + + + + H N ++ C+ ++SGS D T+ + +K
Sbjct 98 LVSASDDKTLKLWDVRSGKCLKTLKGHSN-YVFCCNFNPPSNLIISGSFDETVKIWEVKT 156
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG-PV 183
+ ++ H ++ V F+ +G +I SGS+D R+W+ +GQ + TL PV
Sbjct 157 GKCLK---TLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPV 213
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI--DWAPNGGA-AASG 240
+ ++ + + +L+ + D+TLK+WD + R + GH +E Y I +++ GG SG
Sbjct 214 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 273
Query 241 GKDRMLRIWR 250
+D ++ IW
Sbjct 274 SEDNLVYIWN 283
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 23/259 (8%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ L H ++ V WS L SAS D T+K+ + +G +K LKGH+++V N
Sbjct 77 KTLYGHNLEISDVAWSSD-SSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNP 135
Query 65 DA-VLRRGPFDNRVQ-------QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+ ++ G FD V+ + T A + HFN C ++SGS D
Sbjct 136 PSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFN-----CSGSLIVSGSYDG- 189
Query 117 LILRRLKPNGSFEEVGRMTGHQKL-INCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMAT 175
L R+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T
Sbjct 190 --LCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKT 247
Query 176 LRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
GH Y + + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 248 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHP 307
Query 233 NGGAAASGG--KDRMLRIW 249
AS D+ +++W
Sbjct 308 TENLIASAALENDKTIKLW 326
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 0/60 (0%)
Query 190 ADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
A ++L LS S + + +V + LK L GH + V ++ ++PNG AS DR++ IW
Sbjct 9 AKAQLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIW 68
> mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated factor;
K03130 transcription initiation factor TFIID subunit 5
Length=589
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 0/114 (0%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH ++CV F PN +A+GS DK++RLW+ G + GH GPV L+++ + + L
Sbjct 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYL 483
Query 196 LSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
S D LK+WD L ++L GH D + ++ ++P+ G AS D +R+W
Sbjct 484 ASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D LLS S+D ++ R GSF GH + V SP L ASGS D++ R
Sbjct 353 DSSGLLSCSEDMSI---RYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTAR 409
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
LW+ + GH+ V + + +S L +GS D T+++W A+Q GH
Sbjct 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V ++ ++PNG AS G+D+ L++W
Sbjct 470 PVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKV--LNPLTGALVKDLKGHAH--W--- 56
+++L H PV ++ G L S S D +++ L T ++ +GHA+ W
Sbjct 335 MKILRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDVD 391
Query 57 VNTLAL-----NSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSG 111
++ +L + D R FD + + + + H N+ L +G
Sbjct 392 ISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS-------NYLATG 444
Query 112 SDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQ 171
S D T+ L + S V TGH+ + + FSPNG +AS D+ ++LW+ +G
Sbjct 445 STDKTVRLWSAQQGNS---VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGT 501
Query 172 YMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
LRGH + LA++ DS L+ S S D++++VWD
Sbjct 502 LFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query 57 VNTLALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+NT ++SD+ L FDN + S K +E H D + D T
Sbjct 271 LNTAEISSDSKLLAAGFDNSCIK--LWSLRSKKLKSEPH------HVDTSRIRLACD--T 320
Query 117 LILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATL 176
L + + + E+ + GH + F + + S S D SIR W+ +
Sbjct 321 LEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query 177 RGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGA 236
+GH PV+ + + S SGS D T ++W ++ GH +V + + PN
Sbjct 381 QGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query 237 AASGGKDRMLRIW 249
A+G D+ +R+W
Sbjct 441 LATGSTDKTVRLW 453
> xla:734892 hypothetical protein MGC130867; K03130 transcription
initiation factor TFIID subunit 5
Length=588
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 0/114 (0%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH ++C+ F PN +A+GS DK++RLW+ G + GH GPV LA++ + + L
Sbjct 423 GHLSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYL 482
Query 196 LSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
S D L++WD L ++L GH D + ++ ++P+ ASG D +R+W
Sbjct 483 ASAGEDQRLRLWDLASGTLYKELRGHTDNISSLTFSPDSNLIASGSMDNSVRVW 536
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+++L H+ PV + + G L S S DT+++ N + +GH + V L ++
Sbjct 334 MKILRGHSGPVYRTCFLSDSSG-LLSCSEDTSIRYWNLESYTNTVLYQGHTYPVWDLDVS 392
Query 64 SDAVL----------RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSD 113
++ R FD + + + + H N+ L +GS
Sbjct 393 PCSLFFASASHDRTGRLWCFDRTFPLRIYAGHLSDVDCIKFHPNS-------NYLATGST 445
Query 114 DSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYM 173
D T+ RL V TGH+ + + FSPNG +AS D+ +RLW+ +G
Sbjct 446 DKTV---RLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLRLWDLASGTLY 502
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI 228
LRGH + L ++ DS L+ SGS D++++VWD G + E+ +
Sbjct 503 KELRGHTDNISSLTFSPDSNLIASGSMDNSVRVWDIRNSYCNTPSDGSSSELVGV 557
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 30/142 (21%)
Query 138 QKLINCVCFSPNGLMIASGSFDKSIRLW------------------------------NG 167
++L+N SP+ ++A+G + ++LW +
Sbjct 269 EQLLNAAEISPDSRLLAAGFDNSCVKLWSLKSKKLKAEPHRVDVSRIRLACDVLEEEEDD 328
Query 168 TTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYA 227
G M LRGH GPVY+ + +DS LLS S D++++ W+ E GH V+
Sbjct 329 QAGSEMKILRGHSGPVYRTCFLSDSSGLLSCSEDTSIRYWNLESYTNTVLYQGHTYPVWD 388
Query 228 IDWAPNGGAAASGGKDRMLRIW 249
+D +P AS DR R+W
Sbjct 389 LDVSPCSLFFASASHDRTGRLW 410
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 0/120 (0%)
Query 130 EVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWA 189
E+ + GH + CF + + S S D SIR WN + +GH PV+ L +
Sbjct 333 EMKILRGHSGPVYRTCFLSDSSGLLSCSEDTSIRYWNLESYTNTVLYQGHTYPVWDLDVS 392
Query 190 ADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
S S S D T ++W ++ GH +V I + PN A+G D+ +R+W
Sbjct 393 PCSLFFASASHDRTGRLWCFDRTFPLRIYAGHLSDVDCIKFHPNSNYLATGSTDKTVRLW 452
> hsa:5048 PAFAH1B1, LIS1, LIS2, MDCR, MDS, PAFAH; platelet-activating
factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
(EC:3.1.1.47); K01062 1-alkyl-2-acetylglycerophosphocholine
esterase [EC:3.1.1.47]
Length=410
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ +R + H V+ V + P G ++ SASRD T+K+ TG VK GH WV +
Sbjct 183 ECIRTMHGHDHNVSSV--AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
N D L +++ + + E K +H + EC A
Sbjct 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH--EHVVECISWA------------- 285
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
P S+ + TG + + G + SGS DK+I++W+ +TG + TL GH
Sbjct 286 ---PESSYSSISEATGSETKKS----GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
V + + + + +LS + D TL+VWD + +R + L H V ++D+ +G
Sbjct 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query 241 GKDRMLRIW 249
D+ +++W
Sbjct 399 SVDQTVKVW 407
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query 7 LSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN-SD 65
LS H PVT+V + + SAS D T+KV + TG + LKGH V ++ + S
Sbjct 104 LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query 66 AVLRRGPFDNRVQQQAFTSFAEMK--EAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+L D ++ F F ++ + + ++ + + ++S S D T+ + ++
Sbjct 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
V TGH++ + V + +G +IAS S D+++R+W T + A LR H V
Sbjct 223 TGYC---VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query 184 YQLAWAADSR--------------------LLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
++WA +S LLSGS D T+K+WD L GH +
Sbjct 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V + + G S D+ LR+W
Sbjct 340 WVRGVLFHSGGKFILSCADDKTLRVW 365
> mmu:18472 Pafah1b1, LIS-1, Lis1, MGC25297, MMS10-U, Mdsh, Ms10u,
Pafaha; platelet-activating factor acetylhydrolase, isoform
1b, subunit 1 (EC:3.1.1.47); K01062 1-alkyl-2-acetylglycerophosphocholine
esterase [EC:3.1.1.47]
Length=410
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ +R + H V+ V + P G ++ SASRD T+K+ TG VK GH WV +
Sbjct 183 ECIRTMHGHDHNVSSV--AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
N D L +++ + + E K +H + EC A
Sbjct 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH--EHVVECISWA------------- 285
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
P S+ + TG + + G + SGS DK+I++W+ +TG + TL GH
Sbjct 286 ---PESSYSSISEATGSETKKS----GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
V + + + + +LS + D TL+VWD + +R + L H V ++D+ +G
Sbjct 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query 241 GKDRMLRIW 249
D+ +++W
Sbjct 399 SVDQTVKVW 407
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query 7 LSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN-SD 65
LS H PVT+V + + SAS D T+KV + TG + LKGH V ++ + S
Sbjct 104 LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query 66 AVLRRGPFDNRVQQQAFTSFAEMK--EAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+L D ++ F F ++ + + ++ + + ++S S D T+ + ++
Sbjct 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
V TGH++ + V + +G +IAS S D+++R+W T + A LR H V
Sbjct 223 TGYC---VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query 184 YQLAWAADSR--------------------LLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
++WA +S LLSGS D T+K+WD L GH +
Sbjct 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V + + G S D+ LR+W
Sbjct 340 WVRGVLFHSGGKFILSCADDKTLRVW 365
> dre:406322 poc1a, wdr51a, wu:fl82d01, zgc:56055; POC1 centriolar
protein homolog A (Chlamydomonas)
Length=416
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query 108 LLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNG 167
+ SGS D+++++ +KP R TGH+ + CV FSP+ ++AS S DK++RLW
Sbjct 33 IASGSVDASVMVWNMKPQS---RAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVP 89
Query 168 TTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYA 227
+ R H G V + ++AD + LL+ S D ++K+W +Q++ L H + V
Sbjct 90 SVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRC 149
Query 228 IDWAPNGGAAASGGKDRMLRIW 249
++P+G S DR +++W
Sbjct 150 ARFSPDGQLMVSVSDDRTVKLW 171
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 25/253 (9%)
Query 10 HAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H VT V++S P +L S+SRD TV++ P + H V ++ ++D
Sbjct 59 HKDAVTCVQFS--PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQS 116
Query 69 RRGPFDNR------VQQQAFTSFAEMKEAAEKHFNTFIQEC-----DQEALLSGSDDSTL 117
D++ V +Q ++E N +++ C D + ++S SDD T+
Sbjct 117 LLTASDDQSIKLWSVHRQKI--ICTLRE-----HNNWVR-CARFSPDGQLMVSVSDDRTV 168
Query 118 ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLR 177
L G+ ++ F P+ IA+ S D ++R+W+ T + +
Sbjct 169 KLWDASSRQLIHTFCEPGGYSSYVD---FHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query 178 GHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAA 237
H V L++ LL+ S DSTLK+ D + RL L GH + ++ +G
Sbjct 226 VHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQF 285
Query 238 ASGGKDRMLRIWR 250
AS G D+ + +WR
Sbjct 286 ASAGSDQQVMVWR 298
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 0/74 (0%)
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
+GH + L ++ + + SGS D+++ VW+ + Q GH D V + ++P+
Sbjct 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query 236 AAASGGKDRMLRIW 249
AS +D+ +R+W
Sbjct 74 LLASSSRDKTVRLW 87
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 0/36 (0%)
Query 214 LKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
L+ + GH D + ++D++P+G ASG D + +W
Sbjct 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVW 45
> cel:C14B1.4 tag-125; Temporarily Assigned Gene name family member
(tag-125); K14963 COMPASS component SWD3
Length=376
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 56/253 (22%)
Query 4 LRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLAL 62
+ L H + ++ K+S P G YL ++S D TVK+ N + L GH VN +A
Sbjct 80 MCTLEGHTKSISSAKFS--PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query 63 NSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRL 122
+SD+ ++S SDD TL +
Sbjct 138 SSDS---------------------------------------RCVVSASDDKTLKI--- 155
Query 123 KPNGSFEEV-GRMT----GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLR 177
FE V RMT GH + C F+P ++ SGSFD+S+R+W+ TG + TL
Sbjct 156 -----FEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLP 210
Query 178 GHVGPVYQLAWAADSRLLLSGSGDSTLKVWD-AEQQRLKEDLPGHADEVYAIDWAPNGGA 236
H PV +++ D L+ SGS D +++WD A Q +K + V + ++PNG
Sbjct 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query 237 AASGGKDRMLRIW 249
+ D L++W
Sbjct 271 ILASNLDSTLKLW 283
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
R L+ H V + WS + + SAS D T+K+ +T + K LKGH ++V N
Sbjct 123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP 181
Query 65 -DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+++ G FD V+ + +K T D + +S + D +LI
Sbjct 182 QSSLVVSGSFDESVRIWDVKTGMCIK--------TLPAHSDPVSAVSFNRDGSLIA---- 229
Query 124 PNGSFEEVGRM--TGHQKLINC-----------VCFSPNGLMIASGSFDKSIRLWNGTTG 170
+GS++ + R+ T + + I V FSPNG I + + D +++LW+ + G
Sbjct 230 -SGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query 171 QYMATLRGHVGPVYQLAW---AADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYA 227
+ + GH Y + + ++SGS D + +W+ + + + + L GH V A
Sbjct 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query 228 IDWAPNGGAAASGG--KDRMLRIWR 250
D P ASG D + IWR
Sbjct 349 SDCHPVQNIIASGALEPDNKIHIWR 373
> mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38
Length=303
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query 7 LSFHAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSD 65
L+ H PV +S P G L S+S D ++++ + + LKGH V T++ + D
Sbjct 64 LAGHRGPVKSCCFS--PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPD 121
Query 66 AV-LRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQ----------EALLSGSDD 114
+ L G +D R E++ H + CD ++L +GS D
Sbjct 122 SKQLASGGWDKRAI------VWEVQSGRRVHL--LVGHCDSIQSSDFSPTSDSLATGSWD 173
Query 115 STLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMA 174
ST+ + L+ + + GH I+C+C+S +GL+ ASGS+DK+I +W TT
Sbjct 174 STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLL-ASGSWDKTICVWKPTTNNLPL 232
Query 175 TLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNG 234
L+GH V LA++ D L S T+KVWD + E L G D +A + P+G
Sbjct 233 QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDG 292
Query 235 GAAASG 240
SG
Sbjct 293 KLLVSG 298
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D LL+ SDD + + K S + R+ GH+ + CFSP+G +IAS S D SIR
Sbjct 37 DGRTLLTASDDGCVYVWGTK---SGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIR 93
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
LW+ + + L+GH V ++++ DS+ L SG D VW+ + R L GH D
Sbjct 94 LWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCD 153
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
+ + D++P + A+G D + IW
Sbjct 154 SIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 0/113 (0%)
Query 137 HQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLL 196
H +NC FSP+G + + S D + +W +G+ + L GH GPV ++ D RL+
Sbjct 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query 197 SGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
S S D ++++WD + + L GH V + ++P+ ASGG D+ +W
Sbjct 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Query 9 FHAQPVTQVKWSG-GPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA 66
F+ Q +V S P G L +AS D V V +G L+ L GH V + + D
Sbjct 21 FYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDG 80
Query 67 VLRRGPFDN---RVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
L + R+ A + + + ++ T D + L SG D I+ ++
Sbjct 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWN---GTTGQYMATLRGHV 180
S V + GH I FSP +A+GS+D ++ +W+ T L GH
Sbjct 141 ---SGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHT 197
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
G + L ++A S LL SGS D T+ VW L L GH V ++ ++P+ AS
Sbjct 198 GNISCLCYSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASA 256
Query 241 GKDRMLRIW 249
G R +++W
Sbjct 257 GYSRTVKVW 265
> dre:641491 taf5, MGC123129, wu:fc38g05, zgc:123129; TAF5 RNA
polymerase II, TATA box binding protein (TBP)-associated factor;
K03130 transcription initiation factor TFIID subunit 5
Length=743
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
++L H+ PV V +S + YL S+S D T+++ + T + KGH + V
Sbjct 480 KILHGHSGPVYGVSFSPD-RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPV------- 531
Query 65 DAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKP 124
+D + F+ F +SG D + RL
Sbjct 532 --------WDTQ-----FSPFGYY-------------------FVSGGHDR---VARLWA 556
Query 125 NGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVY 184
++ + GH + C F PN +A+GS D+++RLW+ G + GH GP++
Sbjct 557 TDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIH 616
Query 185 QLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDR 244
LA++ + + L SGS D + +WD + +L GH +YA+ ++ +G ASG D
Sbjct 617 SLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDN 676
Query 245 MLRIW 249
+R+W
Sbjct 677 TVRLW 681
> cel:K04G11.4 hypothetical protein
Length=395
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 14/248 (5%)
Query 10 HAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H + ++ +K+S P G Y+ S S D ++K+ + K L GH +N + +SD+ L
Sbjct 106 HKKSISGIKFS--PDGRYMGSGSADCSIKIWR-MDFVYEKTLMGHRLGINEFSWSSDSKL 162
Query 69 RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEA---LLSGSDDSTLILRRLKPN 125
D+++ + S + + H N C + + SGS D T+ + + N
Sbjct 163 IVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCAR-N 221
Query 126 GSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV-GPVY 184
G+ + + GH+ ++ VCF+ +G +ASGS+D +R+W+ TTG + TL P+
Sbjct 222 GN--TIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPIT 279
Query 185 QLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI--DWAPNGGA-AASGG 241
+ ++ + + +L+ + ++TLK+WD ++ R+ ++ GH + Y + +++ GG SG
Sbjct 280 HVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGS 339
Query 242 KDRMLRIW 249
+D + IW
Sbjct 340 EDHKVYIW 347
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query 86 AEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVC 145
AE+ A +K + D + SGS D ++ + R+ F + GH+ IN
Sbjct 100 AEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMD----FVYEKTLMGHRLGINEFS 155
Query 146 FSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLK 205
+S + +I S S DK +++++ ++G+ + TL+GH V+ + L+ SGS D T++
Sbjct 156 WSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIR 215
Query 206 VWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
+W A +PGH D V ++ + +G ASG D ++RIW
Sbjct 216 IWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIW 259
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query 10 HAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNT---------- 59
H PV+ V ++ YL S S D V++ + TG VK L H T
Sbjct 231 HEDPVSSVCFNRD-GAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKY 289
Query 60 -LALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLI 118
LA N + L+ + + +T K +F+ + ++SGS+D +
Sbjct 290 ILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSV----TGGKWIVSGSEDHKVY 345
Query 119 LRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRL 164
+ L+ + E + + GH + C P +IAS + + +R+
Sbjct 346 IWNLQ---TREILQTLDGHNTAVMCTDCHPGQNIIASAALEPDMRI 388
> ath:AT5G67320 HOS15; HOS15 (high expression of osmotically responsive
genes 15)
Length=613
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 53/257 (20%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
+ + LS H P+ +KW+ YL + S D T A+V D+K W
Sbjct 356 ELISTLSKHKGPIFSLKWNKKGD-YLLTGSVDRT---------AVVWDVKAE-EWKQQFE 404
Query 62 LNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRR 121
+S L V + SFA + S DS + L +
Sbjct 405 FHSGPTLD-------VDWRNNVSFA-----------------------TSSTDSMIYLCK 434
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVG 181
+ G TGHQ +NCV + P G ++AS S D + ++WN ++ LR H
Sbjct 435 I---GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query 182 PVYQLAWAA--------DSRLLL-SGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
+Y + W+ + +L L S S DST+K+WDAE ++ GH + VY++ ++P
Sbjct 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query 233 NGGAAASGGKDRMLRIW 249
NG ASG D+ + IW
Sbjct 552 NGEYIASGSLDKSIHIW 568
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 108/277 (38%), Gaps = 39/277 (14%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGA-------------LVKD 49
+R+L H V WS P L S S D T ++ + G+ ++K
Sbjct 258 VRILEGHTSEVCACAWS--PSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKH 315
Query 50 LKGHAHW----VNTLALNSD-AVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQ--- 101
KG ++ V TL N + +L G D Q + +T E+ KH
Sbjct 316 AKGKSNEKSKDVTTLDWNGEGTLLATGSCDG--QARIWTLNGELISTLSKHKGPIFSLKW 373
Query 102 ECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKS 161
+ LL+GS D T ++ +K ++ +G ++ N + A+ S D
Sbjct 374 NKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW----RNNVSFATSSTDSM 429
Query 162 IRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGH 221
I L + T GH G V + W LL S S DST K+W+ +Q DL H
Sbjct 430 IYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREH 489
Query 222 ADEVYAIDWAPNGGAA---------ASGGKDRMLRIW 249
E+Y I W+P G AS D +++W
Sbjct 490 TKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query 130 EVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGH---------- 179
+V + GH + +SP+ ++ASGS D + R+W+ G + A G
Sbjct 257 DVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHA 316
Query 180 -------VGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAP 232
V L W + LL +GS D ++W + L L H ++++ W
Sbjct 317 KGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKWNK 375
Query 233 NGGAAASGGKDRMLRIW 249
G +G DR +W
Sbjct 376 KGDYLLTGSVDRTAVVW 392
> xla:100036804 taf5, taf2d, tafii100; TAF5 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 100kDa; K03130
transcription initiation factor TFIID subunit 5
Length=783
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 43/246 (17%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+++L H+ PV +S + YL S+S D TV++ + T + KGH + V
Sbjct 519 MKILYGHSGPVYATSFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVAYKGHNYPV------ 571
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+D + + +SG D + RL
Sbjct 572 ---------WDTQFSPYGY------------------------YFVSGGHDR---VARLW 595
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
++ + GH + C F PN IA+GS D+++R+W+ +G + GH GP+
Sbjct 596 ATDHYQPLRIFAGHLADVICTRFHPNSNYIATGSTDRTVRMWDVLSGNCVRIFTGHKGPI 655
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ LA+ + + L SG+ DS + +WD + +L GH + VYA+ ++ +G +SG D
Sbjct 656 HALAFTPNGKFLSSGASDSRILLWDIGHGLMVGELKGHTNTVYALRFSKDGEILSSGSMD 715
Query 244 RMLRIW 249
+R+W
Sbjct 716 NTVRLW 721
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 43/165 (26%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLA 61
Q LR+ + H V ++ Y+ + S D TV++ + L+G V+ GH
Sbjct 601 QPLRIFAGHLADVICTRFHPN-SNYIATGSTDRTVRMWDVLSGNCVRIFTGH-------- 651
Query 62 LNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRR 121
+GP + AFT + L SG+ DS ++L
Sbjct 652 --------KGP----IHALAFTPNGKF-------------------LSSGASDSRILLWD 680
Query 122 LKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWN 166
+ G VG + GH + + FS +G +++SGS D ++RLW+
Sbjct 681 I---GHGLMVGELKGHTNTVYALRFSKDGEILSSGSMDNTVRLWD 722
> xla:379889 katnb1, MGC52971; katanin p80 (WD40-containing) subunit
B 1
Length=655
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query 106 EALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLW 165
E + SGS D+ + L ++ G V R GH + + C+ FSP+G +AS S D SI+LW
Sbjct 118 EFVASGSLDTNIKLWDVRRKGC---VFRYKGHTQAVRCLRFSPDGKWLASTSDDHSIKLW 174
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ T G+ MA L H GPV + + + LL SGS D T++ WD E+ +L G V
Sbjct 175 DLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPV 234
Query 226 YAIDWAPNGGAAASGGKDRMLRIW 249
AI ++ +GG GGKD LR++
Sbjct 235 RAILFSNDGGCIFCGGKD-ALRVY 257
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query 105 QEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRL 164
+E +++GS +L + L+ + + + + GH+ + + F P G +ASGS D +I+L
Sbjct 75 EELIVAGSQSGSLRIWDLE---AAKILRTLMGHKANVCSLDFHPYGEFVASGSLDTNIKL 131
Query 165 WNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADE 224
W+ + +GH V L ++ D + L S S D ++K+WD ++ +L H
Sbjct 132 WDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASTSDDHSIKLWDLTAGKMMAELSEHKGP 191
Query 225 VYAIDWAPNGGAAASGGKDRMLRIW 249
V I++ PN ASG DR +R W
Sbjct 192 VNIIEFHPNEYLLASGSADRTVRFW 216
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 0/101 (0%)
Query 149 NGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
+G ++A+G D + LW+ + +L GH PV + + L+++GS +L++WD
Sbjct 32 SGRLVATGGEDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWD 91
Query 209 AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
E ++ L GH V ++D+ P G ASG D +++W
Sbjct 92 LEAAKILRTLMGHKANVCSLDFHPYGEFVASGSLDTNIKLW 132
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query 123 KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGP 182
KPN + +TGH + V F+ + +I +GS S+R+W+ + + TL GH
Sbjct 52 KPNC----IMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKAN 107
Query 183 VYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGK 242
V L + + SGS D+ +K+WD ++ GH V + ++P+G AS
Sbjct 108 VCSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASTSD 167
Query 243 DRMLRIW 249
D +++W
Sbjct 168 DHSIKLW 174
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 46/219 (21%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ LR L H V + + P G ++ S S DT +K+ + V KGH V L
Sbjct 96 KILRTLMGHKANVCSLDFH--PYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCL 153
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
+ D + L S SDD ++ L
Sbjct 154 RFSPDG---------------------------------------KWLASTSDDHSIKLW 174
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L E ++ H+ +N + F PN ++ASGS D+++R W+ Q + G
Sbjct 175 DLTAGKMMAE---LSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGET 231
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLP 219
PV + ++ D + G D+ L+V+ E + + +P
Sbjct 232 IPVRAILFSNDGGCIFCGGKDA-LRVYGWEPDQCFDSVP 269
> mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;
K14963 COMPASS component SWD3
Length=328
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query 123 KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGP 182
KPN + + GH I+ V FSPNG +AS + D I +W G TL GH
Sbjct 26 KPNYALRLT--LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE 83
Query 183 VYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGK 242
+ +AW++DS L+S S D TLKVWD + + L GH+D V+ D+ P SG
Sbjct 84 ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143
Query 243 DRMLRIWR 250
D ++IW
Sbjct 144 DESVKIWE 151
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 16/257 (6%)
Query 3 ALRV-LSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
ALR+ L+ H+ ++ VK+S P G +L S++ D + + G K L GH+ ++ +
Sbjct 30 ALRLTLAGHSAAISSVKFS--PNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDV 87
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECD----QEALLSGSDDST 116
A +SD+ D++ + + + + H + F+ CD ++SGS D +
Sbjct 88 AWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGH-SDFVFCCDFNPPSNLIVSGSFDES 146
Query 117 LILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATL 176
+ + +K + ++ H I+ V F+ NG +I SGS+D R+W+ +GQ + TL
Sbjct 147 VKIWEVKTGKCLKT---LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203
Query 177 RGHVG-PVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI--DWAPN 233
PV + ++ + + +L+ + D+TLK+WD + R + GH +E Y + ++
Sbjct 204 ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query 234 GGA-AASGGKDRMLRIW 249
G SG +D M+ IW
Sbjct 264 GRKWVVSGSEDNMVYIW 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query 5 RVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS 64
+ L H+ ++ V WS L SAS D T+KV + +G +K LKGH+ +V N
Sbjct 75 KTLYGHSLEISDVAWSSD-SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query 65 DA-VLRRGPFDNRVQQQAFTSFAEMK--EAAEKHFNTFIQECDQEALLSGSDDSTLILRR 121
+ ++ G FD V+ + +K A + C+ ++SGS D L R
Sbjct 134 PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDG---LCR 190
Query 122 LKPNGSFEEVGRMTGH-QKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
+ S + + + ++ V FSPNG I + + D +++LW+ + G+ + T GH
Sbjct 191 IWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK 250
Query 181 GPVYQLAWAADS----RLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGA 236
Y L +A+ S + ++SGS D+ + +W+ + + + + L GH D V + P
Sbjct 251 NEKYCL-FASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNI 309
Query 237 AASGG--KDRMLRIW 249
AS D+ +++W
Sbjct 310 IASAALENDKTIKVW 324
> xla:398032 katnb1; katanin p80 (WD repeat containing) subunit
B 1
Length=655
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query 106 EALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLW 165
E + SGS D+ + L ++ G V R GH + + C+ FSP+G +AS S D S++LW
Sbjct 118 EFVASGSLDTNIKLWDVRRKGC---VFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLW 174
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ T G+ MA L H GPV + + + LL SGS D T++ WD E+ +L G V
Sbjct 175 DLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPV 234
Query 226 YAIDWAPNGGAAASGGKDRMLRIW 249
AI ++ +GG GGKD LR++
Sbjct 235 RAILFSNDGGCIFCGGKDS-LRVY 257
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query 105 QEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRL 164
+E +++GS +L + L+ + + + + GH+ ++ + F P G +ASGS D +I+L
Sbjct 75 EELIVAGSQSGSLRIWDLE---AAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKL 131
Query 165 WNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADE 224
W+ + +GH V L ++ D + L S S D ++K+WD ++ +L H
Sbjct 132 WDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGP 191
Query 225 VYAIDWAPNGGAAASGGKDRMLRIW 249
V I++ PN ASG DR +R W
Sbjct 192 VNIIEFHPNEYLLASGSADRTVRFW 216
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 0/101 (0%)
Query 149 NGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
+G ++A+G D + LW+ + +L GH PV + + L+++GS +L++WD
Sbjct 32 SGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWD 91
Query 209 AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
E ++ L GH V ++D+ P G ASG D +++W
Sbjct 92 LEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLW 132
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query 110 SGSDDSTLILRRL-KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGT 168
+G DD + L + KPN + +TGH + V F+ + +I +GS S+R+W+
Sbjct 38 TGGDDCRVHLWSVNKPNC----IMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLE 93
Query 169 TGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI 228
+ + TL GH V L + + SGS D+ +K+WD ++ GH V +
Sbjct 94 AAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCL 153
Query 229 DWAPNGGAAASGGKDRMLRIW 249
++P+G AS D +++W
Sbjct 154 RFSPDGKWLASASDDHSVKLW 174
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 46/219 (21%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ LR L H V+ + + P G ++ S S DT +K+ + V KGH V L
Sbjct 96 KILRTLMGHKANVSSLDFH--PYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCL 153
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
+ D + L S SDD ++ L
Sbjct 154 RFSPDG---------------------------------------KWLASASDDHSVKLW 174
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L E ++ H+ +N + F PN ++ASGS D+++R W+ Q + G
Sbjct 175 DLTAGKMMAE---LSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGET 231
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLP 219
PV + ++ D + G DS L+V+ E + + +P
Sbjct 232 IPVRAILFSNDGGCIFCGGKDS-LRVYGWEPDQCFDTVP 269
> sce:YBR198C TAF5, TAF90; Taf5p; K03130 transcription initiation
factor TFIID subunit 5
Length=798
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH ++CV F PNG + +GS DK+ R+W+ +TG + GH PV +A D R L
Sbjct 607 GHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWL 666
Query 196 LSGSGDSTLKVWD-AEQQRLKEDLPGHA-DEVYAIDWAPNGGAAASGGKDRMLRIW 249
+GS D + VWD +RLK+ + GH + +Y++ ++ G SGG D +R+W
Sbjct 667 STGSEDGIINVWDIGTGKRLKQ-MRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 0/116 (0%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH + FSP+ + SGS DK++RLW+ T + + +GH PV+ ++++
Sbjct 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query 194 LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
+ S D T ++W + GH ++V + + PNG +G D+ R+W
Sbjct 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D + LLSGS+D T+ RL + + GH + V FSP G A+ S D++ R
Sbjct 536 DNKYLLSGSEDKTV---RLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTAR 592
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
LW+ + GH+ V +++ + + +GS D T ++WD GH
Sbjct 593 LWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTA 652
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V +I P+G ++G +D ++ +W
Sbjct 653 PVISIAVCPDGRWLSTGSEDGIINVW 678
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query 26 YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNS----------DAVLRRGPFDN 75
YL S S D TV++ + T + KGH H V ++ + D R D+
Sbjct 539 YLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDH 598
Query 76 RVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMT 135
+ F + H N C + +GS D T R+ + + V
Sbjct 599 IYPLRIFAGHLNDVDCVSFHPNG----C---YVFTGSSDKTC---RMWDVSTGDSVRLFL 648
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGH-VGPVYQLAWAADSRL 194
GH + + P+G +++GS D I +W+ TG+ + +RGH +Y L+++ + +
Sbjct 649 GHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNV 708
Query 195 LLSGSGDSTLKVWDAEQ 211
L+SG D T++VWD ++
Sbjct 709 LISGGADHTVRVWDLKK 725
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query 138 QKLINCVCFSPNGLMIASGSFDKSIRLW--NGTT---------------GQYMATLRGHV 180
K ++C+ FS + + A+G D I++W +G++ TL GH
Sbjct 466 NKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHS 525
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
G VY +++ D++ LLSGS D T+++W + GH V+ + ++P G A+
Sbjct 526 GTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATA 585
Query 241 GKDRMLRIW 249
D+ R+W
Sbjct 586 SHDQTARLW 594
> hsa:6877 TAF5, TAF2D, TAFII100; TAF5 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 100kDa; K03130
transcription initiation factor TFIID subunit 5
Length=800
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
L++L H+ PV +S + YL S+S D TV++ + T + KGH + V
Sbjct 536 LKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPV------ 588
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+D + + +SG D + RL
Sbjct 589 ---------WDTQFSPYGYY------------------------FVSGGHDR---VARLW 612
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
++ + GH +NC F PN +A+GS D+++RLW+ G + GH GP+
Sbjct 613 ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 672
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ L ++ + R L +G+ D + +WD + +L GH D V ++ ++ +G ASG D
Sbjct 673 HSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMD 732
Query 244 RMLRIW 249
+R+W
Sbjct 733 NTVRLW 738
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query 94 KHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMI 153
K + Q D + SDD +L R+ + E+ + GH + FSP+ +
Sbjct 502 KKLRSVKQASDLSLIDKESDD---VLERIMDEKTASELKILYGHSGPVYGASFSPDRNYL 558
Query 154 ASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQR 213
S S D ++RLW+ T + +GH PV+ ++ +SG D ++W + +
Sbjct 559 LSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ 618
Query 214 LKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
GH +V + PN A+G DR +R+W
Sbjct 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 654
> mmu:226182 Taf5, 6330528C20Rik, AV117817; TAF5 RNA polymerase
II, TATA box binding protein (TBP)-associated factor; K03130
transcription initiation factor TFIID subunit 5
Length=801
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
L++L H+ PV +S + YL S+S D TV++ + T + KGH + V
Sbjct 537 LKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPV------ 589
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLK 123
+D + + +SG D + RL
Sbjct 590 ---------WDTQFSPYGYY------------------------FVSGGHDR---VARLW 613
Query 124 PNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPV 183
++ + GH +NC F PN +A+GS D+++RLW+ G + GH GP+
Sbjct 614 ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPI 673
Query 184 YQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKD 243
+ L ++ + R L +G+ D + +WD + +L GH D V ++ ++ +G ASG D
Sbjct 674 HSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMD 733
Query 244 RMLRIW 249
+R+W
Sbjct 734 NTVRLW 739
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query 94 KHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMI 153
K + Q D + SDD +L R+ + E+ + GH + FSP+ +
Sbjct 503 KKLRSVKQASDLSLIDKESDD---VLERIMDEKTASELKILYGHSGPVYGASFSPDRNYL 559
Query 154 ASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQR 213
S S D ++RLW+ T + +GH PV+ ++ +SG D ++W + +
Sbjct 560 LSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ 619
Query 214 LKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
GH +V + PN A+G DR +R+W
Sbjct 620 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 655
> xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centriolar
protein homolog B (Chlamydomonas)
Length=468
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query 104 DQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIR 163
D + L S S D+ +++ KP + GH++ + CV FSP+G ++AS S D+++R
Sbjct 29 DSKQLASSSADACVMIWNFKPQS---RAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVR 85
Query 164 LWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHAD 223
LW L+ H V + +++D + ++ S D ++K W+ +QR L H +
Sbjct 86 LWAPNIKGESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTN 145
Query 224 EVYAIDWAPNGGAAASGGKDRMLRIW 249
V ++P+G AS D+ +RIW
Sbjct 146 WVRCARFSPDGRLIASCSDDKTVRIW 171
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query 10 HAQPVTQVKWSGGPQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDAVL 68
H + VT V++S P G+L S+S+D TV++ P LK H V + +SD
Sbjct 59 HKEAVTCVQFS--PSGHLVASSSKDRTVRLWAPNIKGESTVLKAHTAVVRCVNFSSDGQT 116
Query 69 RRGPFDNR------VQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRL 122
D++ + +Q F F+ + F D + S SDD T+ + L
Sbjct 117 FITASDDKSIKAWNLHRQRFL-FSLTQHTNWVRCARF--SPDGRLIASCSDDKTVRIWDL 173
Query 123 KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGP 182
GH ++ F+ G +AS D ++++W+ + + + H
Sbjct 174 TNRLCINTFVDYKGHSNYVD---FNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHNAG 230
Query 183 VYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGK 242
V L++ LL+ S D TLK+ D + RL L GH V ++ ++ +G ASG
Sbjct 231 VSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFSKSGDQFASGAT 290
Query 243 DRMLRIWR 250
D + +W+
Sbjct 291 DAQVLVWK 298
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 0/74 (0%)
Query 176 LRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGG 235
+GH V + ++ DS+ L S S D+ + +W+ + Q PGH + V + ++P+G
Sbjct 14 FKGHKDAVTCVDFSPDSKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGH 73
Query 236 AAASGGKDRMLRIW 249
AS KDR +R+W
Sbjct 74 LVASSSKDRTVRLW 87
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query 1 QQALRVLSFHAQPVTQVKWSGGPQGYLF-SASRDTTVKV---LNPLTGALVKDLKGHAHW 56
Q+ L L+ H V ++S P G L S S D TV++ N L D KGH+++
Sbjct 134 QRFLFSLTQHTNWVRCARFS--PDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNY 191
Query 57 VNTLALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
V+ + + +V + + ++ LL+ S D T
Sbjct 192 VDFNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGT 251
Query 117 L-ILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQY 172
L IL L+ G + + GHQ + V FS +G ASG+ D + +W +Y
Sbjct 252 LKILDLLE--GRL--IYTLHGHQGPVLSVTFSKSGDQFASGATDAQVLVWKTNFDKY 304
> mmu:74187 Katnb1, 2410003J24Rik, KAT; katanin p80 (WD40-containing)
subunit B 1
Length=658
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query 106 EALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLW 165
E + SGS D+ + L ++ G V R GH + + C+ FSP+G +AS + D +++LW
Sbjct 118 EFVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ T G+ M+ GH GPV + + + LL SGS D T++ WD E+ ++ + G V
Sbjct 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query 226 YAIDWAPNGGAAASGGKDRMLRIW 249
++ + P+G SG +D LR++
Sbjct 235 RSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 0/116 (0%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH+ I + F P G +ASGS D +I+LW+ + RGH V L ++ D +
Sbjct 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query 194 LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
L S + D T+K+WD ++ + PGH V +++ PN ASG DR +R W
Sbjct 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 0/101 (0%)
Query 149 NGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
+G ++A+G D + LW+ + +L GH PV + L+++GS +++VWD
Sbjct 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query 209 AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
E ++ L GH + ++D+ P G ASG +D +++W
Sbjct 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query 108 LLSGSDDSTLILRRL-KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWN 166
L +G DD + L + KPN + +TGH + V + +I +GS SIR+W+
Sbjct 36 LATGGDDCRVNLWSINKPNC----IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query 167 GTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVY 226
+ + TL GH + L + + SGS D+ +K+WD ++ GH+ V
Sbjct 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query 227 AIDWAPNGGAAASGGKDRMLRIW 249
+ ++P+G AS D +++W
Sbjct 152 CLRFSPDGKWLASAADDHTVKLW 174
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 46/213 (21%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ LR L H + + + P G ++ S S+DT +K+ + V +GH+ V L
Sbjct 96 KILRTLMGHKANICSLDFH--PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
+ D + L S +DD T+ L
Sbjct 154 RFSPDG---------------------------------------KWLASAADDHTVKLW 174
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L E GH +N V F PN ++ASGS D++IR W+ Q ++ + G
Sbjct 175 DLTAGKMMSE---FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQR 213
GPV + + D L SG DS L+V+ E +R
Sbjct 232 GPVRSVLFNPDGCCLYSGCQDS-LRVYGWEPER 263
> xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65kDa; K03130
transcription initiation factor TFIID subunit 5
Length=587
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 0/114 (0%)
Query 136 GHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLL 195
GH ++C+ F PN +A+GS DK++RLW+ G + GH GPV LA++ + + L
Sbjct 422 GHLSDVDCIKFHPNSNYLATGSSDKTVRLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYL 481
Query 196 LSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
S D LK+WD ++L GH D + ++ ++P+ AS D +R+W
Sbjct 482 ASAGEDQRLKLWDLASGTQYKELRGHTDNISSLTFSPDSSLIASASMDNSVRVW 535
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 21/235 (8%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+++L H+ PV + + G L S S DT+++ N + +GH + V L ++
Sbjct 333 MKILRGHSGPVYRTCFLSDSSG-LLSCSEDTSIRYWNLESYTNTVLYQGHTYPVWDLDVS 391
Query 64 SDAVL----------RRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSD 113
++ R FD + + + + H N+ L +GS
Sbjct 392 PCSLFFASASHDRTGRLWCFDRTFPLRIYAGHLSDVDCIKFHPNS-------NYLATGSS 444
Query 114 DSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYM 173
D T+ RL V TGH+ + + FSPNG +AS D+ ++LW+ +G
Sbjct 445 DKTV---RLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGTQY 501
Query 174 ATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAI 228
LRGH + L ++ DS L+ S S D++++VWD G + E+ +
Sbjct 502 KELRGHTDNISSLTFSPDSSLIASASMDNSVRVWDIRNSYCNTPSDGSSSELVGV 556
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 12/193 (6%)
Query 57 VNTLALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDST 116
+NT ++ D+ L FDN + S K AE H D + D
Sbjct 271 LNTAEISPDSRLLAAGFDNSCVK--LWSLKSKKLKAEPH------RVDVSRIRLACD--- 319
Query 117 LILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATL 176
+L + + + E+ + GH + CF + + S S D SIR WN +
Sbjct 320 -VLEEEEDDQAGTEMKILRGHSGPVYRTCFLSDSSGLLSCSEDTSIRYWNLESYTNTVLY 378
Query 177 RGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGA 236
+GH PV+ L + S S S D T ++W ++ GH +V I + PN
Sbjct 379 QGHTYPVWDLDVSPCSLFFASASHDRTGRLWCFDRTFPLRIYAGHLSDVDCIKFHPNSNY 438
Query 237 AASGGKDRMLRIW 249
A+G D+ +R+W
Sbjct 439 LATGSSDKTVRLW 451
> hsa:10300 KATNB1, KAT; katanin p80 (WD repeat containing) subunit
B 1
Length=655
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query 106 EALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLW 165
E + SGS D+ + L ++ G V R GH + + C+ FSP+G +AS + D +++LW
Sbjct 118 EFVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ T G+ M+ GH GPV + + + LL SGS D T++ WD E+ ++ + G V
Sbjct 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query 226 YAIDWAPNGGAAASGGKDRMLRIW 249
++ + P+G SG +D LR++
Sbjct 235 RSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 0/116 (0%)
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+ GH+ I + F P G +ASGS D +I+LW+ + RGH V L ++ D +
Sbjct 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query 194 LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
L S + D T+K+WD ++ + PGH V +++ PN ASG DR +R W
Sbjct 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 0/101 (0%)
Query 149 NGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
+G ++A+G D + LW+ + +L GH PV + L+++GS +++VWD
Sbjct 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query 209 AEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
E ++ L GH + ++D+ P G ASG +D +++W
Sbjct 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query 108 LLSGSDDSTLILRRL-KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWN 166
L +G DD + L + KPN + +TGH + V + +I +GS SIR+W+
Sbjct 36 LATGGDDCRVNLWSINKPNC----IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query 167 GTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVY 226
+ + TL GH + L + + SGS D+ +K+WD ++ GH+ V
Sbjct 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query 227 AIDWAPNGGAAASGGKDRMLRIW 249
+ ++P+G AS D +++W
Sbjct 152 CLRFSPDGKWLASAADDHTVKLW 174
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 46/213 (21%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ LR L H + + + P G ++ S S+DT +K+ + V +GH+ V L
Sbjct 96 KILRTLMGHKANICSLDFH--PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
+ D + L S +DD T+ L
Sbjct 154 RFSPDG---------------------------------------KWLASAADDHTVKLW 174
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L E GH +N V F PN ++ASGS D++IR W+ Q ++ + G
Sbjct 175 DLTAGKMMSE---FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQR 213
GPV + + D L SG DS L+V+ E +R
Sbjct 232 GPVRSVLFNPDGCCLYSGCQDS-LRVYGWEPER 263
> xla:734280 wdr69, MGC85213; WD repeat domain 69
Length=415
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query 23 PQGYLF-SASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALNSDA-VLRRGPFDNRVQ-- 78
PQ L + S DTT K+ + +G L GHA + +L+ N+ L G FD+ V
Sbjct 187 PQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVW 246
Query 79 -----QQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGR 133
++ T E + FN +C A S D S + L NG V
Sbjct 247 EIPSGRRIHTLIGHRGEISSAQFN---WDCSLIATAS-MDKSCKLWDSL--NGKC--VAT 298
Query 134 MTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQLAWAADSR 193
+TGH + V F G ++A+ S D + R+++ ++ + +A L GH G + ++ + A
Sbjct 299 LTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGN 358
Query 194 LLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRMLRIWR 250
+++ S D T ++WD + L GH DE+++ + G +G KD RIWR
Sbjct 359 RIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIWR 415
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query 107 ALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFS-PNGLMIASGSFDKSIRLW 165
+ ++GS D T ++ S EE+ + GH+ ++ + F+ P G IA+GSFDK+ +LW
Sbjct 106 SFITGSYDRTC---KVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLW 162
Query 166 NGTTGQYMATLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEV 225
+ TG+ T RGH + L + S L+ +GS D+T K+WD + L GHA E+
Sbjct 163 SAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEI 222
Query 226 YAIDWAPNGGAAASGGKDRMLRIWR 250
++ + G +G D + +W
Sbjct 223 ISLSFNTTGDRLITGSFDHTVSVWE 247
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+VL H P+T V ++ ++ + S D T KV + +G + L+GH + V + N
Sbjct 85 FKVLRAHILPLTNVAFNKSGSSFI-TGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFN 143
Query 64 SDAVLRRGPFDNRVQQQAFTSFAEMKEAAE-KHFNTFIQECDQEALLSGSDDSTLILRRL 122
+ P+ +++ +F ++ A K ++TF
Sbjct 144 N-------PYGDKIATGSFDKTCKLWSAETGKCYHTF----------------------- 173
Query 123 KPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGP 182
GH I C+ F+P +IA+GS D + +LW+ +G+ TL GH
Sbjct 174 ------------RGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAE 221
Query 183 VYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGK 242
+ L++ L++GS D T+ VW+ R L GH E+ + + + A+
Sbjct 222 IISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASM 281
Query 243 DRMLRIW 249
D+ ++W
Sbjct 282 DKSCKLW 288
> sce:YPR178W PRP4, RNA4; Prp4p; K12662 U4/U6 small nuclear ribonucleoprotein
PRP4
Length=465
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 0/124 (0%)
Query 126 GSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHVGPVYQ 185
G +G + GH++ I+ V + P+G I S S D + RLW+ +T Q + GH V+
Sbjct 253 GGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFS 312
Query 186 LAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASGGKDRM 245
L++ D L+ SG DS +WD L GH+ +Y + W+PNG A+GG D +
Sbjct 313 LSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGI 372
Query 246 LRIW 249
+ +W
Sbjct 373 INVW 376
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 46/175 (26%)
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
RL + +E+ GH K + + F +G ++ SG D LW+ +G + TL GH
Sbjct 290 RLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHS 349
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWD------------------AEQQRL-KED---- 217
P+Y +AW+ + + +G GD + VWD Q R KED
Sbjct 350 KPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKK 409
Query 218 -----------------------LPGHADEVYAIDWAPNGGAAASGGKDRMLRIW 249
L GH D++ ++D + N SGG DR +++W
Sbjct 410 LVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 49/167 (29%)
Query 88 MKEAAEKHFNTFIQECDQEALLSGSDDSTLILRRLKPNGSFEEVGRMTGHQKLINCVCFS 147
++E +K + +CD + SG DS +L ++ S +V + GH K I V +S
Sbjct 302 LQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIR---SGSKVMTLAGHSKPIYTVAWS 358
Query 148 PNGLMIASGSFDKSIRLWN------GTTGQYMA--------------------------- 174
PNG +A+G D I +W+ G Q +A
Sbjct 359 PNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNL 418
Query 175 -------------TLRGHVGPVYQLAWAADSRLLLSGSGDSTLKVWD 208
+L GH + L + +S L+SG D ++K+W+
Sbjct 419 INVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
> xla:399199 pafah1b1, lis2, mdcr, mds, pafah, pafah1b1-b; platelet-activating
factor acetylhydrolase 1b, regulatory subunit
1 (45kDa) (EC:3.1.1.47); K01062 1-alkyl-2-acetylglycerophosphocholine
esterase [EC:3.1.1.47]
Length=410
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Query 2 QALRVLSFHAQPVTQVKWSGGPQG-YLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTL 60
+ LR + H V+ V + P G ++ SASRD T+K+ TG VK GH WV +
Sbjct 183 ECLRTMHGHDHNVSSV--AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query 61 ALNSDAVLRRGPFDNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLILR 120
N D L +++ + + E K +H + EC A
Sbjct 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH--EHVVECISWA------------- 285
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
P S+ + TG + + G + SGS DK+I++W+ + G + TL GH
Sbjct 286 ---PESSYSTISDATGSETKRS----GKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHD 338
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
V + + + +LS + D T+++WD + +R + L H V ++D+ +G
Sbjct 339 NWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query 241 GKDRMLRIW 249
D+ +++W
Sbjct 399 SVDQTVKVW 407
Lambda K H
0.318 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 9020732748
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40