bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0072_orf2 Length=382 Score E Sequences producing significant alignments: (Bits) Value xla:414644 hypothetical protein MGC81203; K03469 ribonuclease ... 95.5 3e-19 dre:436932 rnaseh1, zgc:91971; ribonuclease H1 (EC:3.1.26.4); ... 92.0 3e-18 hsa:246243 RNASEH1, H1RNA, RNH1; ribonuclease H1 (EC:3.1.26.4)... 91.7 4e-18 xla:734386 hypothetical protein MGC115038; K03469 ribonuclease... 91.7 4e-18 mmu:19819 Rnaseh1; ribonuclease H1 (EC:3.1.26.4); K03469 ribon... 91.3 6e-18 xla:735129 rnaseh1, MGC115609, h1rna, rnh1; ribonuclease H1; K... 88.2 5e-17 tgo:TGME49_020450 ribonuclease H, putative (EC:3.1.26.4) 73.9 1e-12 sce:YMR234W RNH1; Ribonuclease H1; able to bind double-strande... 72.0 4e-12 cel:C04F12.9 rnh-1.3; RNase H family member (rnh-1.3); K03469 ... 71.6 5e-12 eco:b0214 rnhA, cer, dasF, ECK0214, herA, JW0204, rnh, sdrA, s... 57.0 1e-07 cel:ZK938.7 rnh-1.2; RNase H family member (rnh-1.2) 41.2 0.007 dre:100332816 RETRotransposon-like family member (retr-1)-like 33.1 2.1 dre:567357 Sushi, von Willebrand factor type A, EGF and pentra... 31.6 5.0 hsa:57523 NYNRIN, CGIN1, FLJ11811, KIAA1305; NYN domain and re... 31.2 6.5 cel:K12D12.5 hypothetical protein 31.2 6.6 > xla:414644 hypothetical protein MGC81203; K03469 ribonuclease HI [EC:3.1.26.4] Length=300 Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 25/169 (14%) Query 177 DVVEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLR 236 D +Y DG C NGRV ARAGIGV++G L L G QT QRAE+ + AL Sbjct 150 DAAVVYTDGCCSGNGRVKARAGIGVYWGQGHPLNLAEKLE-GRQTNQRAEIQAACRAL-- 206 Query 237 FVDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLI 296 +Q ++ +LV+ +DS + +N + W W RNGWK ++GK V N + Sbjct 207 ----------EQAKAQNLTKLVLYTDSMFTINGITKWIHSWKRNGWKLSTGKNVINREDF 256 Query 297 QAILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYGNEMADKLAVQGA 345 + + + T +++ +I GH+G GNE ADKL+ +GA Sbjct 257 ENLEKM------------TQGLDIKWMHIPGHAGFAGNEAADKLSREGA 293 > dre:436932 rnaseh1, zgc:91971; ribonuclease H1 (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Length=276 Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 31/186 (16%) Query 166 PQPETATPMKP------DVVEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGP 219 PQP+T T D V +Y DG C NG+ ARAGIGV++G D R + L G Sbjct 111 PQPKTGTTSSDGFTYMGDAVVVYTDGCCSGNGKHGARAGIGVYWGRDHPRNVAERL-PGR 169 Query 220 QTYQRAELASILAALLRFVDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCR 279 QT QRAEL + AL +Q + ++V+ +DS + +N + W W Sbjct 170 QTNQRAELQAACKAL------------EQAKEMNFKKVVLYTDSKFTINGVTSWVKTWKS 217 Query 280 NGWKSTSGKPVKNADLIQAILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYGNEMADK 339 NGW+ SG + N D Q + L A W +I GH+G GNE AD+ Sbjct 218 NGWRLKSGGVIINKDDFQQLDKL------NAELDVVWM------HIPGHAGYTGNEEADR 265 Query 340 LAVQGA 345 L+ +GA Sbjct 266 LSREGA 271 > hsa:246243 RNASEH1, H1RNA, RNH1; ribonuclease H1 (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Length=286 Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 40/195 (20%) Query 163 SVHPQP----ETATPMKPDVVEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVG 218 SV P P +T + M D V +Y DG C SNGR RAGIGV++G PL VG Sbjct 121 SVEPAPPVSRDTFSYMG-DFVVVYTDGCCSSNGRRRPRAGIGVYWGPGH------PLNVG 173 Query 219 -----PQTYQRAELASILAALLRFVDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPW 273 QT QRAE+ + A+ +Q ++ +LV+ +DS + +N + W Sbjct 174 IRLPGRQTNQRAEIHAACKAI------------EQAKTQNINKLVLYTDSMFTINGITNW 221 Query 274 AARWCRNGWKSTSGKPVKNADLIQAILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYG 333 W +NGWK+++GK V N + A+ L T +++ ++ GHSG G Sbjct 222 VQGWKKNGWKTSAGKEVINKEDFVALERL------------TQGMDIQWMHVPGHSGFIG 269 Query 334 NEMADKLAVQGANSA 348 NE AD+LA +GA + Sbjct 270 NEEADRLAREGAKQS 284 > xla:734386 hypothetical protein MGC115038; K03469 ribonuclease HI [EC:3.1.26.4] Length=204 Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 25/167 (14%) Query 179 VEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLRFV 238 E+Y DG C NG+ A GIGV++G +D R + L G QT QRAE+ + Sbjct 61 AEVYTDGCCSRNGQYGANGGIGVYWGPNDSRNVSARL-EGRQTNQRAEIEAAY------- 112 Query 239 DYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQA 298 +A +Q + L + +DS + ++ + W RW N WK+ G+ V N Q Sbjct 113 -----TAAKQARNDNVTHLEINTDSKFTIDGMTKWVPRWKENNWKTIDGRDVINKQDFQK 167 Query 299 ILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYGNEMADKLAVQGA 345 + C+ V++ Y+ GHSG GNEMAD+LA G+ Sbjct 168 LDKACENM------------DVKWNYVPGHSGNAGNEMADQLAKAGS 202 > mmu:19819 Rnaseh1; ribonuclease H1 (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Length=285 Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 35/177 (19%) Query 177 DVVEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVG-----PQTYQRAELASIL 231 + V +Y DG C SNGR ARAGIGV++G PL VG QT QRAE+ + Sbjct 137 ESVVVYTDGCCSSNGRKRARAGIGVYWGPGH------PLNVGIRLPGRQTNQRAEIHAAC 190 Query 232 AALLRFVDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVK 291 A++ Q ++ +LV+ +DS + +N + W W +NGW++++GK V Sbjct 191 KAIM------------QAKAQNISKLVLYTDSMFTINGITNWVQGWKKNGWRTSTGKDVI 238 Query 292 NADLIQAILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYGNEMADKLAVQGANSA 348 N + + L T +++ +I GHSG GNE AD+LA +GA + Sbjct 239 NKEDFMELDEL------------TQGMDIQWMHIPGHSGFVGNEEADRLAREGAKQS 283 > xla:735129 rnaseh1, MGC115609, h1rna, rnh1; ribonuclease H1; K03469 ribonuclease HI [EC:3.1.26.4] Length=292 Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 27/173 (15%) Query 177 DVVEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLR 236 D +Y DG C NGR+ A+AGIGV++G L L G QT QRAE+ + AL Sbjct 143 DSAVVYTDGCCSQNGRLKAQAGIGVYWGPGHPLNLAERLE-GRQTNQRAEIQAACRAL-- 199 Query 237 FVDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLI 296 +Q ++ +LV+ +DS + +N + W W R GWK ++G+ V N + Sbjct 200 ----------EQAQAKNITKLVLYTDSMFTINGITKWIHSWKRKGWKLSNGQNVINREDF 249 Query 297 QAILLLCDKRRKTAPSGATWRG-SVEYEYIRGHSGVYGNEMADKLAVQGANSA 348 + + L RG + + +I GH+G GNE ADKL+ +GA + Sbjct 250 EKLDKLT-------------RGLDINWMHIPGHAGFEGNEAADKLSREGAQKS 289 > tgo:TGME49_020450 ribonuclease H, putative (EC:3.1.26.4) Length=657 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 29/120 (24%) Query 255 VRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQAILLLCDKRR------- 307 + + + SDS YAV C+ W W NGW++++G V+N DLI I L R+ Sbjct 526 LEMRICSDSVYAVRCVTEWVTAWKANGWRTSAGTEVRNRDLIAKIHELLQSRKLGDARFS 585 Query 308 --------------------KTAPSGATW--RGSVEYEYIRGHSGVYGNEMADKLAVQGA 345 AP W RG++E+ I+GHSG YGNE AD+LA GA Sbjct 586 SETPELKVERERDSGMSRKEHKAPIQGGWGGRGTIEFVLIKGHSGNYGNEKADQLACLGA 645 Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 3/65 (4%) Query 174 MKPD--VVEIYADGACPSNGR-VDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASI 230 M+ D ++ IY DGAC SNGR +A+AG+GVFFG D R + L PQT QRAEL +I Sbjct 351 MRDDARILYIYTDGACRSNGRGKEAKAGVGVFFGDGDPRNVSRRLTGQPQTNQRAELQAI 410 Query 231 LAALL 235 L AL+ Sbjct 411 LDALV 415 > sce:YMR234W RNH1; Ribonuclease H1; able to bind double-stranded RNAs and RNA-DNA hybrids; associates with RNAse polymerase I; the homolog of mammalian RNAse HII (the S. cerevisiae homolog of mammalian RNAse HI is RNH201) (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Length=348 Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query 149 AADHHRLLNCSPGASVHPQPETATPMKPDVVEIYADGACPSNGRVDARAGIGVFFGTDDR 208 +A ++L+N S + ++ M + +Y DG+ NG +RAG G +F Sbjct 158 SAHDYKLMNISKESFESKYKLSSNTMYNKSMNVYCDGSSFGNGTSSSRAGYGAYFEGAPE 217 Query 209 RYLFMPLVVGPQTYQRAELASILAALLRFVDYDDDSAKQQPSGRSEVRLVVISDSSYAVN 268 + PL+ G QT RAE+ ++ AL + + + + + +V + +DS Y Sbjct 218 ENISEPLLSGAQTNNRAEIEAVSEALKKIWE-------KLTNEKEKVNYQIKTDSEYVTK 270 Query 269 CLGPWAARWCRNGWKSTSGKPVKNADLIQAILLLCDKRRKTAPSGATW---RGSVEYEYI 325 L R+ K G P N+DLI ++ K +K G + E++ Sbjct 271 LLND---RYMTYDNKKLEGLP--NSDLIVPLVQRFVKVKKYYELNKECFKNNGKFQIEWV 325 Query 326 RGHSGVYGNEMADKLAVQGA 345 +GH G GNEMAD LA +GA Sbjct 326 KGHDGDPGNEMADFLAKKGA 345 > cel:C04F12.9 rnh-1.3; RNase H family member (rnh-1.3); K03469 ribonuclease HI [EC:3.1.26.4] Length=139 Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 19/150 (12%) Query 180 EIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLRFVD 239 + Y DG+ NG+ +R G GV +D + + GPQT R EL +I A D Sbjct 4 DFYTDGSALGNGQQGSRGGYGVHVPSDTSKNVSGSYPHGPQTNNRYELEAIKHATQMARD 63 Query 240 YDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQAI 299 D S VR + +DS A + + W W NG+K++SG+ VKN DLI+ I Sbjct 64 VPD----------SHVR--IHTDSKNAKDSVTKWNDNWKSNGYKTSSGQDVKNQDLIRDI 111 Query 300 LLLCDKRRKTAPSGATWRGSVEYEYIRGHS 329 + SG T VE+E++RGHS Sbjct 112 DRNV---QALKHSGKT----VEFEHVRGHS 134 > eco:b0214 rnhA, cer, dasF, ECK0214, herA, JW0204, rnh, sdrA, sin; ribonuclease HI, degrades RNA of DNA-RNA hybrids (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Length=155 Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 30/163 (18%) Query 179 VEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLRFV 238 VEI+ DG+C N G G R F T R EL + + AL Sbjct 5 VEIFTDGSCLGN---PGPGGYGAILRYRGREKTFSAGYT-RTTNNRMELMAAIVAL---- 56 Query 239 DYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQA 298 + + +++ +DS Y + W W + GWK+ KPVKN DL Q Sbjct 57 ----------EALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQR 106 Query 299 ILLLCDKRRKTAPSGATWRGSVEYEYIRGHSGVYGNEMADKLA 341 + A + +++E+++GH+G NE D+LA Sbjct 107 L------------DAALGQHQIKWEWVKGHAGHPENERCDELA 137 > cel:ZK938.7 rnh-1.2; RNase H family member (rnh-1.2) Length=404 Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 12/171 (7%) Query 180 EIYADGACPSNGRVDARAGIGVFFGTDDR--RYLFMPLVVGPQTYQRAELASILAALLRF 237 E+Y DG+ +NG+ AR G + F D Y FM VG QT EL +I A Sbjct 7 EVYTDGSTVNNGKRGARGGWAIVFPFDRSLDEYDFMK--VGKQTNNVYELTAIYEATEVV 64 Query 238 VDYDDDSAKQQPSGRSEVRLVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQ 297 +D Q+ + + SS + C + NG ST G + + Sbjct 65 RCWDSFKCNQKLEFVRLKNTITPTTSSILIPCTRRTVS---PNG--STDGTNMGGLRITP 119 Query 298 AILLLCDKRRKTAPSGATWRG-SVEYEYIRGHSGVYGNEMADKLAVQGANS 347 I L R PS A V+ EY++GH + N AD+LA + S Sbjct 120 GI--LSKISRSFVPSTAISESLDVKIEYVKGHHTNFFNCEADRLAKKACRS 168 > dre:100332816 RETRotransposon-like family member (retr-1)-like Length=1236 Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 20/111 (18%) Query 259 VISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQAILLLCDKRRKTAPSGATWRG 318 + +DS YA + A W G+ + GKP+ ++ L+ ++ A Sbjct 796 IYTDSRYAFGVAHDFGAIWASRGFVAADGKPISHSSLVMDLI-----------KAARLPR 844 Query 319 SVEYEYIRGHSG-----VYGNEMAD---KLAVQ-GANSAWPAHSLASGAGF 360 S+ RGHS GN AD KLA Q G +W S+ S + + Sbjct 845 SLAIIKTRGHSTFDTEEAKGNNFADTQAKLAAQSGKQPSWLNASMVSTSPY 895 > dre:567357 Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like Length=3644 Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Query 131 AQPKETWGGAEPSGRELNAAD----HHRLLNCS 159 QP TW G +PS R + D HH +LNCS Sbjct 414 CQPDGTWSGVQPSCRIRSCPDLSPPHHGMLNCS 446 > hsa:57523 NYNRIN, CGIN1, FLJ11811, KIAA1305; NYN domain and retroviral integrase containing Length=1898 Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 24/150 (16%) Query 197 AGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAALLRFVDYDDDSAKQQPSGRSEVR 256 AG G++ + + + P T A LA++ L RF G+S + Sbjct 1325 AGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERF-------------GQSPLP 1371 Query 257 LVVISDSSYAVNCLGPWAARWCRNGWKSTSGKPVKNADLIQAILLLCDKRRKTAPSGATW 316 +V ++ ++ + L W G+ S+ G P+ + L+ I+ L SG + Sbjct 1372 VVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPSLLSYIISLT--------SGLS- 1422 Query 317 RGSVEYEYIRGHSGVYGNEMADKLAVQGAN 346 S+ + Y + G D LA QGA Sbjct 1423 --SLPFIYRTSYRGSLFAVTVDTLAKQGAQ 1450 > cel:K12D12.5 hypothetical protein Length=648 Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query 179 VEIYADGACPSNGRVDARAGIGVFFGTDDRRYLFMPLVVGPQTYQRAELASILAAL 234 V I+A C G+ DA A GV++G DD R LV QT RA + ++ +AL Sbjct 166 VAIFA--ICEKEGKCDALAKYGVYWGQDDHRN-EAGLVEDGQTSLRAIMCAVRSAL 218 Lambda K H 0.318 0.134 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 16969450192 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40