bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0107_orf1
Length=220
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K1477... 268 1e-71
cpv:cgd4_3180 Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+H... 227 2e-59
tpv:TP02_0728 ATP-dependent RNA helicase; K14777 ATP-dependent... 220 4e-57
pfa:PFB0860c DEAD/DEAH box helicase, putative; K14777 ATP-depe... 209 4e-54
bbo:BBOV_I004220 19.m02359; DEAD/DEAH box helicase and helicas... 204 2e-52
mmu:67755 Ddx47, 4930588A18Rik, C77285; DEAD (Asp-Glu-Ala-Asp)... 204 2e-52
xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypep... 202 6e-52
hsa:51202 DDX47, DKFZp564O176, E4-DBP, FLJ30012, HQ0256, MSTP1... 201 1e-51
cel:T26G10.1 hypothetical protein; K14777 ATP-dependent RNA he... 200 3e-51
dre:553715 MGC112350; zgc:112350 (EC:3.6.4.13); K14777 ATP-dep... 199 8e-51
bbo:BBOV_I004200 19.m02020; DEAD/DEAH box helicase and helicas... 189 7e-48
ath:AT5G60990 DEAD/DEAH box helicase, putative (RH10); K14777 ... 188 1e-47
sce:YHR065C RRP3; Protein involved in rRNA processing; require... 160 3e-39
hsa:54555 DDX49, FLJ10432, R27090_2; DEAD (Asp-Glu-Ala-Asp) bo... 151 2e-36
dre:386632 ddx49, wu:fb82g04, wu:fd12e05; DEAD (Asp-Glu-Ala-As... 147 2e-35
mmu:234374 Ddx49, R27090_2; DEAD (Asp-Glu-Ala-Asp) box polypep... 145 1e-34
ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dep... 142 7e-34
cel:H20J04.4 hypothetical protein; K14778 ATP-dependent RNA he... 140 4e-33
sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-bo... 129 9e-30
bbo:BBOV_III005880 17.m07521; DEAD/DEAH box helicase family pr... 119 9e-27
ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181 ... 112 1e-24
cpv:cgd1_250 ATP-dependent RNA helicase 111 2e-24
pfa:PF13_0177 ATP-dependent RNA Helicase, putative; K01509 ade... 110 5e-24
tgo:TGME49_095010 ATP-dependent RNA helicase, putative 108 1e-23
hsa:55661 DDX27, DKFZp667N057, DRS1, FLJ12917, FLJ20596, FLJ22... 108 1e-23
dre:378844 ddx27, cb843; DEAD (Asp-Glu-Ala-Asp) box polypeptid... 107 3e-23
tpv:TP03_0195 ATP-dependent RNA helicase; K14808 ATP-dependent... 106 6e-23
tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.9... 106 7e-23
cel:F57B9.6 inf-1; INitiation Factor family member (inf-1); K0... 106 8e-23
pfa:PFF1500c DEAD/DEAH box ATP-dependent RNA helicase, putativ... 105 9e-23
tpv:TP01_0765 eukaryotic translation initiation factor 4A; K13... 105 2e-22
ath:AT5G65900 DEAD/DEAH box helicase, putative; K13179 ATP-dep... 104 2e-22
bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicas... 104 2e-22
xla:734505 ddx27, MGC114699; DEAD (Asp-Glu-Ala-Asp) box polype... 104 2e-22
mmu:228889 Ddx27, C86129; DEAD (Asp-Glu-Ala-Asp) box polypepti... 103 4e-22
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 103 5e-22
tgo:TGME49_112990 ATP-dependent RNA helicase, putative (EC:5.9... 102 8e-22
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 102 9e-22
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 102 1e-21
bbo:BBOV_IV010990 23.m06251; eukaryotic initiation factor 4A-3... 102 1e-21
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 102 1e-21
pfa:PFD1070w eukaryotic initiation factor, putative; K13025 AT... 101 2e-21
hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 101 2e-21
cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA h... 101 2e-21
pfa:PFL1310c DEAD-box helicase; K12823 ATP-dependent RNA helic... 101 2e-21
dre:100330671 eukaryotic translation initiation factor 4A-like... 101 2e-21
hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862, NM... 101 2e-21
mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF... 101 2e-21
ath:AT3G19760 eukaryotic translation initiation factor 4A, put... 101 3e-21
xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp2... 100 3e-21
> tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=479
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/222 (63%), Positives = 166/222 (74%), Gaps = 8/222 (3%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTY-AAALLQQQQNCSRIMIFTNTCLAAR 60
L KP K+ V+ K + L Q FLL+P K K T+ AAALL + S +++FTNTC AR
Sbjct 249 LKKPVKLEVNSKYDVASHLQQHFLLVPFKLKHTHLAAALLHL--SPSSVIVFTNTCANAR 306
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
K A FLRH+ F++VCLHG+MTQPQRIGAL KFRAAE L ATEVGSRGLDIP V V+N
Sbjct 307 KTALFLRHLGFQSVCLHGKMTQPQRIGALTKFRAAETSCLVATEVGSRGLDIPHVQMVIN 366
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDL-PEEK 179
FDVPLSSK+YIHRVGRTARAGR GRALT+VTQYDVE YQRIE ALG+K+EE +L EK
Sbjct 367 FDVPLSSKEYIHRVGRTARAGRTGRALTIVTQYDVEAYQRIEHALGQKLEELTELTATEK 426
Query 180 AMVLHERALEALRETELELREADE----EQSKKRKRSQTHKR 217
M LHE+ LEALR ELE READE +++ K+KR +KR
Sbjct 427 VMPLHEKVLEALRSAELEAREADEAALVQKAAKKKRGAGNKR 468
> cpv:cgd4_3180 Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
; K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=446
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L P KI V+ K T A L+Q ++ +P K+KW+Y +LQ + I IF NTC+ R+
Sbjct 229 LSNPIKICVNTKYDTAANLMQYYMFIPFKYKWSYFIGMLQNLGQYTGI-IFCNTCINCRR 287
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
+ + F ++ LHG+M+Q QR+ AL F+ + R+L TEVGSRGLDIP VDFV+NF
Sbjct 288 GDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLFTTEVGSRGLDIPHVDFVINF 347
Query 122 DVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAM 181
D+P SSKDY+HRVGRTARAGR+GRA+++VTQYDVE +QRIEFAL +K++EY L E+ M
Sbjct 348 DIPTSSKDYVHRVGRTARAGRSGRAISMVTQYDVETFQRIEFALNRKLDEYTSLQREEVM 407
Query 182 VLHERALEALRETELELREADEEQS 206
+H + +++LR + EL +++E+ +
Sbjct 408 AIHAKVVDSLRTVDAELNDSNEKTA 432
> tpv:TP02_0728 ATP-dependent RNA helicase; K14777 ATP-dependent
RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=470
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 157/230 (68%), Gaps = 14/230 (6%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L+KP +I+V+ K T L+Q++LL+PLK K+TY A +L + + S IM+F NTCL ++K
Sbjct 237 LMKPIQINVNTKYHTSEHLIQKYLLIPLKFKYTYLACILWKY-STSTIMVFCNTCLTSQK 295
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEAR-------------ILTATEVGSR 108
+ FL++++F++VCLHG+++Q QR+ +L F+ + + IL T+VGSR
Sbjct 296 VTLFLQNLSFKSVCLHGKLSQIQRLNSLNSFKTGKLQPIPQPHIISGLFNILVVTDVGSR 355
Query 109 GLDIPAVDFVLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKK 168
GLDIP VD V+NFDVP +SKDYIHRVGRTARAG++G +LTL+TQYD+E +QR E+AL KK
Sbjct 356 GLDIPFVDLVINFDVPNTSKDYIHRVGRTARAGKSGISLTLITQYDIESFQRTEYALNKK 415
Query 169 MEEYPDLPEEKAMVLHERALEALRETELELREADEEQSKKRKRSQTHKRR 218
+EEY D+ EE+ ++ +LR E++ + + +K Q +K +
Sbjct 416 LEEYKDISEEEVYNKYDECCNSLRNAEMDYKNKFQLIKTNKKNKQYNKSK 465
> pfa:PFB0860c DEAD/DEAH box helicase, putative; K14777 ATP-dependent
RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=562
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 143/203 (70%), Gaps = 2/203 (0%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
CL P K+ V K +T + L++ ++ LPLK+K+TY ++L Q I+IFTNTC A+
Sbjct 351 CLKNPVKVEVSNKYSTVSTLIETYIFLPLKYKYTYLSSLCFHYQ-TRNIIIFTNTCATAQ 409
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
KL F R++ +++CLHG++TQ QR+ +L F+ + IL +T+VG+RGLD+ + V+N
Sbjct 410 KLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFKVNKYNILISTQVGARGLDLQDIKIVIN 469
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
FD+ S K+YIHRVGRTARAGR+G+++T VTQYDVE + IE L KK++++ DL E
Sbjct 470 FDI-CSCKEYIHRVGRTARAGRSGKSITFVTQYDVENFLAIEKQLNKKIDKFTDLDENDV 528
Query 181 MVLHERALEALRETELELREADE 203
++ HE+ +EALR +E+E++E E
Sbjct 529 LLYHEQTIEALRLSEIEMKENQE 551
> bbo:BBOV_I004220 19.m02359; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-)
Length=454
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 142/219 (64%), Gaps = 11/219 (5%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L P + VD K +T L Q+FLL+P K+K+TY AALL + I +F TC A++
Sbjct 228 LKDPISVQVDDKYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAI-VFCKTCDGAQR 286
Query 62 LAAFLRHMAFEA---VCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
AA+L+ + F VCLHG+MTQ R AL F+ IL ATEVG RGLD+P V+ V
Sbjct 287 CAAYLKGLKFTTICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELV 346
Query 119 LNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEE 178
+NFD+P SKDYIHRVGRTARAGR+G ALT+VTQYDVE++QRIE AL KK+EE+ DL E+
Sbjct 347 INFDIPECSKDYIHRVGRTARAGRSGLALTVVTQYDVELFQRIELALNKKLEEFTDLDED 406
Query 179 KAMVLHERALEALRETELELREADEEQSKKRKRSQTHKR 217
A+ H E+LR + E+ + R+ T+KR
Sbjct 407 TALAKHALCAESLRRVQ-------SEKLNHKGRTNTNKR 438
> mmu:67755 Ddx47, 4930588A18Rik, C77285; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 47 (EC:3.6.4.13); K14777 ATP-dependent RNA
helicase DDX47/RRP3 [EC:3.6.4.13]
Length=455
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
L P K +V K T L Q +L +P K K TY +L + S MIF +TC +
Sbjct 219 ALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNS-FMIFCSTCNNTQ 277
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
+ A LR++ F A+ LHGQM+Q +R+G+L KF+A IL AT+V SRGLDIP VD V+N
Sbjct 278 RTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVN 337
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
FD+P SKDYIHRVGRTARAGR+G+A+T VTQYDVE++QRIE +GKK+ +P EE
Sbjct 338 FDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEE-V 396
Query 181 MVLHERALEALRETELELREADEEQSKKRK 210
M+L ER EA R +ELRE E++ +KR+
Sbjct 397 MMLTERVNEAQRFARMELREHGEKKKRKRE 426
> xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypeptide
47; K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=448
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 2/216 (0%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
L P K +V K T L Q ++ +P K K +Y +L + S MIF +TC +
Sbjct 214 ALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNS-FMIFCSTCNNTQ 272
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
++A LR++ F A+ LHGQM Q +R+GAL KF+A IL AT+V SRGLDIP VD V+N
Sbjct 273 RVALLLRNLGFTAIPLHGQMGQNKRLGALNKFKAKSRSILLATDVASRGLDIPHVDVVIN 332
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
FD+P SKDYIHRVGRTARAGR+G+A+T V+QYDVE++QRIE +GKK+ +P EE+
Sbjct 333 FDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFP-TQEEEV 391
Query 181 MVLHERALEALRETELELREADEEQSKKRKRSQTHK 216
M+L+ER EA R +ELRE E++ + R + K
Sbjct 392 MMLNERVSEAQRFARIELREHGEKKKRPRNDADDDK 427
> hsa:51202 DDX47, DKFZp564O176, E4-DBP, FLJ30012, HQ0256, MSTP162,
RRP3; DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (EC:3.6.4.13);
K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=455
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 139/210 (66%), Gaps = 2/210 (0%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
L P K +V K T L Q ++ +P K K TY +L + S MIF +TC +
Sbjct 219 ALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNS-FMIFCSTCNNTQ 277
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
+ A LR++ F A+ LHGQM+Q +R+G+L KF+A IL AT+V SRGLDIP VD V+N
Sbjct 278 RTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVN 337
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
FD+P SKDYIHRVGRTARAGR+G+A+T VTQYDVE++QRIE +GKK+ +P +E
Sbjct 338 FDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDE-V 396
Query 181 MVLHERALEALRETELELREADEEQSKKRK 210
M+L ER EA R +ELRE E++ + R+
Sbjct 397 MMLTERVAEAQRFARMELREHGEKKKRSRE 426
> cel:T26G10.1 hypothetical protein; K14777 ATP-dependent RNA
helicase DDX47/RRP3 [EC:3.6.4.13]
Length=489
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 139/210 (66%), Gaps = 2/210 (0%)
Query 5 PCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARKLAA 64
P ++SV + T L Q ++ +P K+K TY LL + S I +F TC ++A
Sbjct 243 PARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAI-VFCATCATTMQIAV 301
Query 65 FLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVP 124
LR + +AV LHGQM+Q +R+G+L KF++ IL T+V +RGLDIP VD V+N+D+P
Sbjct 302 MLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMP 361
Query 125 LSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLH 184
SKDY+HRVGRTARAGR+G A+T+VTQYDVE YQ+IE LGKK++EY + E + MVL
Sbjct 362 SQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCV-ENEVMVLV 420
Query 185 ERALEALRETELELREADEEQSKKRKRSQT 214
ER EA +E++E DE++ +KR Q
Sbjct 421 ERTQEATENARIEMKEMDEKKKSGKKRRQN 450
> dre:553715 MGC112350; zgc:112350 (EC:3.6.4.13); K14777 ATP-dependent
RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=512
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 142/210 (67%), Gaps = 6/210 (2%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L P K SV K AT L Q ++ +P K+K Y ++L + S M+F TC ++
Sbjct 275 LQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLVSILNELAGNS-FMVFCGTCNNTQR 333
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
+A LR++ A+ LHGQM+Q +R+GAL KF++ +L AT+V SRGLDIP VD V+NF
Sbjct 334 VALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINF 393
Query 122 DVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAM 181
D+P SKDYIHRVGRTARAGR+G+++T VTQYDVE++QRIE +GKK+ +P EE+ M
Sbjct 394 DIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEALIGKKLPAFP-TQEEEVM 452
Query 182 VLHERALEALRETELELREADEEQSKKRKR 211
+L ER EA R +E++E+ S+KRKR
Sbjct 453 MLVERVSEAQRFARIEMKES----SEKRKR 478
> bbo:BBOV_I004200 19.m02020; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=433
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 122/177 (68%), Gaps = 4/177 (2%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L P + VD K +T L Q+FLL+P K+K+TY AALL + I +F TC A++
Sbjct 239 LKDPISVQVDDKYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAI-VFCKTCDGAQR 297
Query 62 LAAFLRHMAFEA---VCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
AA+L+ + F VCLHG+MTQ R AL F+ IL ATEVG RGLD+P V+ V
Sbjct 298 CAAYLKGLKFTTICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELV 357
Query 119 LNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDL 175
+NFD+P SKDYIHRVGRTARAGR+G ALT+VTQYDVE++QRIE AL KK+EE+ L
Sbjct 358 INFDIPECSKDYIHRVGRTARAGRSGLALTVVTQYDVELFQRIELALNKKLEEFTTL 414
> ath:AT5G60990 DEAD/DEAH box helicase, putative (RH10); K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=456
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 10/216 (4%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
CL P KI K +T L QQ+ + K+K Y +L + S MIFT TC R
Sbjct 216 CLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPE-STSMIFTRTCDGTR 274
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
LA LR + F A+ + GQMTQ +R+GAL KF+A E IL T+V SRGLDIP+VD V+N
Sbjct 275 FLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVIN 334
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
+D+P +SKDYIHRVGRTARAGR+G ++LV QY++E Y +IE +GKK+ EYP E++
Sbjct 335 YDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYP-AEEDEV 393
Query 181 MVLHERALEALRETELELREA--------DEEQSKK 208
+ L ER EA + + + ++E+ D+E+S++
Sbjct 394 LSLLERVAEAKKLSAMNMKESGGRKRRGEDDEESER 429
> sce:YHR065C RRP3; Protein involved in rRNA processing; required
for maturation of the 35S primary transcript of pre-rRNA
and for cleavage leading to mature 18S rRNA; homologous to
eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase
activity (EC:3.6.1.-); K14777 ATP-dependent RNA helicase
DDX47/RRP3 [EC:3.6.4.13]
Length=501
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
L P K +V K T L+Q +++P K TY LL + + I IFT T A
Sbjct 277 SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI-IFTRTKANAE 335
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
+L+ + F A LHG + Q QR+G+L F+A + IL AT+V +RGLDIP+VD V+N
Sbjct 336 RLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVN 395
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKM 169
+D+P+ SK YIHRVGRTARAGR+G++++LV+QYD+E+ RIE LGKK+
Sbjct 396 YDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKKL 444
> hsa:54555 DDX49, FLJ10432, R27090_2; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 49 (EC:3.6.4.13); K14778 ATP-dependent RNA helicase
DDX49/DBP8 [EC:3.6.4.13]
Length=483
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query 20 LLQQFLLLPLKHKWTYAAALLQQQQNCSR---IMIFTNTCLAARKLAAFLRHMAFEAVCL 76
L Q++LL+P K K Y L+Q+ Q+ I+IFTNTC + L LR +F V L
Sbjct 219 LDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVAL 278
Query 77 HGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGR 136
H M Q +R ALAKF+++ RIL AT+V SRGLDIP V V+N + P K YIHRVGR
Sbjct 279 HSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGR 338
Query 137 TARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHERALEALRETEL 196
TARAGR G+A+TLVTQYD+ + IE + KK+EE+ + E + + + + RE E+
Sbjct 339 TARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEF-SVEEAEVLQILTQVNVVRRECEI 397
Query 197 ELREAD-EEQSKKRKRSQ 213
+L A +E+ + KR Q
Sbjct 398 KLEAAHFDEKKEINKRKQ 415
> dre:386632 ddx49, wu:fb82g04, wu:fd12e05; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 49 (EC:3.6.4.13); K14778 ATP-dependent
RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Length=468
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 118/198 (59%), Gaps = 5/198 (2%)
Query 20 LLQQFLLLPLKHKWTYAAALLQ---QQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCL 76
L Q+F+L P K K Y L+Q + + I+IFTNTC + + L LR F + L
Sbjct 219 LDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISL 278
Query 77 HGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGR 136
H M Q QR LAKF++ +IL AT+V +RGLDIP V V+N + P K YIHRVGR
Sbjct 279 HSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGR 338
Query 137 TARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHERALEALRETEL 196
TARAGRNG ++TLVTQYD+ + IE K++E+P + E++ + + + R+ E+
Sbjct 339 TARAGRNGVSITLVTQYDIHLINAIEEQNQTKLKEFP-IEEKEVLKILTQVNVTRRQCEI 397
Query 197 ELREAD-EEQSKKRKRSQ 213
+L D +E+ K KR Q
Sbjct 398 KLESTDFDEKKKINKRKQ 415
> mmu:234374 Ddx49, R27090_2; DEAD (Asp-Glu-Ala-Asp) box polypeptide
49 (EC:3.6.4.13); K14778 ATP-dependent RNA helicase DDX49/DBP8
[EC:3.6.4.13]
Length=480
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 125/209 (59%), Gaps = 12/209 (5%)
Query 20 LLQQFLLLPLKHKWTYAAALLQ----QQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVC 75
L Q++LL+P K K Y L+Q Q ++CS I+IFTNTC + L LR F V
Sbjct 219 LDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCS-IIIFTNTCKTCQILCMMLRKFNFPTVA 277
Query 76 LHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVG 135
LH M Q +R ALAKF+++ RIL AT+V SRGLDIP V V+N + P K YIHRVG
Sbjct 278 LHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVG 337
Query 136 RTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLH--ERALEALRE 193
RTARAGR G+A+TLVTQYD+ + IE + +++ E L E+A VL + RE
Sbjct 338 RTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAE---LVVEEAEVLQILTQVNVVRRE 394
Query 194 TELELREA--DEEQSKKRKRSQTHKRRKP 220
E++L + DE++ +++ + + P
Sbjct 395 CEIKLEASHFDEKKEINKRKQMILEGKDP 423
> ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dependent
RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Length=491
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Query 16 TPAVLLQQFLLLPLKHKWTYAAALLQQQQN--CSRIMIFTNTCLAARKLAAFLRHMAFEA 73
T L QQF+ K Y +L Q ++ MIF +TC ++L+ L + E
Sbjct 270 TVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVEN 329
Query 74 VCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHR 133
+ +H +Q R+ AL+KF++ + IL AT+V SRGLDIP VD V+N+D+P +DY+HR
Sbjct 330 IAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHR 389
Query 134 VGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEY 172
VGRTARAGR G A++++T+ DV++ +IE +GKKME Y
Sbjct 390 VGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPY 428
> cel:H20J04.4 hypothetical protein; K14778 ATP-dependent RNA
helicase DDX49/DBP8 [EC:3.6.4.13]
Length=561
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Query 20 LLQQFLLLPLKHKWTYAAALLQ---QQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCL 76
L Q++++ P+ K Y +++ ++ S +MIF TC + LA + F L
Sbjct 308 LEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSL 367
Query 77 HGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGR 136
H Q+ Q QR+ AL+ FR+ +++ T+V SRGLDIP VD V+N +VP K YIHRVGR
Sbjct 368 HSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGR 427
Query 137 TARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHERALEALRETEL 196
+ARAGR G AL+ VTQYDVE+ Q +E +GKK++E P+ + + L A +E EL
Sbjct 428 SARAGRFGSALSFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQ-VLVAKKEAEL 486
Query 197 EL 198
+L
Sbjct 487 KL 488
> sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-box
family; component of 90S preribosome complex involved in
production of 18S rRNA and assembly of 40S small ribosomal
subunit; ATPase activity stimulated by association with Esp2p
(EC:3.6.1.-); K14778 ATP-dependent RNA helicase DDX49/DBP8
[EC:3.6.4.13]
Length=431
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 8/212 (3%)
Query 9 SVDKKTATPAVLLQQFLLLP--LKHKWTYAAALLQQQQNCSRIMIFTNTCLAARKLAAFL 66
SVD A P+ L +++L+P +K + Y ++ +N + I IF N + A L L
Sbjct 217 SVDN-VAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAI-IFVNRTMTAEILRRTL 274
Query 67 RHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLS 126
+ + LH QM Q +R +L +FRA ARIL AT+V SRGLDIP V+ V+N+D+P
Sbjct 275 KQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPSD 334
Query 127 SKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHER 186
+IHR GRTARAGR G A++ VTQ DV Q IE + KKM E + + + +
Sbjct 335 PDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVI---RK 391
Query 187 ALEALRETELE-LREADEEQSKKRKRSQTHKR 217
AL + + + E L +E +RKR Q K+
Sbjct 392 ALTKVTKAKRESLMAMQKENFGERKRQQKKKQ 423
> bbo:BBOV_III005880 17.m07521; DEAD/DEAH box helicase family
protein
Length=480
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
Query 20 LLQQFLLLPLKHKWTYAAALLQQQ---QNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCL 76
L Q +L LP Y LLQ Q + + +IFT T + A L ++ F+ C+
Sbjct 291 LKQNYLFLPENVHLPYLVHLLQTQLLERETDQGIIFTATKKKCQLTAVALEYLDFKVTCI 350
Query 77 HGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGR 136
H M Q +R LAKFR ++IL AT++ +RG+DI AV FV+N D P +++DYIHRVGR
Sbjct 351 HSLMKQRKRNACLAKFRTGVSKILVATDLIARGIDIQAVSFVVNLDFPRTTEDYIHRVGR 410
Query 137 TARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHERALEALRETEL 196
TAR+ G A++ V ++D+E + +E A K+E+ ++ + +A+ L + A + ++
Sbjct 411 TARSKSTGIAISFVDEFDIEKLKTVEKAANIKLEKL-EVDDAQAVKLLNKVSMATQRAQI 469
Query 197 ELREADEEQSK 207
L+E + Q+K
Sbjct 470 YLQENNYFQNK 480
> ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181
ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=789
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 19/220 (8%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQ--QQQNCSRIMIFTNTCLA 58
L KP ++S D P L ++ + + + A LL + S+++IF+ T A
Sbjct 365 SLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQA 424
Query 59 ARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
A +L +A LHG +TQ QR+ +L FR E L AT+V +RGLDI V V
Sbjct 425 AHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTV 484
Query 119 LNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEE 178
+N+ P Y+HRVGRTARAGR G A+T VT D + + I +G K++ +PE+
Sbjct 485 INYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRV-IPEQ 543
Query 179 ----------------KAMVLHERALEALRETELELREAD 202
A++ ER ALR+ E+E +A+
Sbjct 544 SIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAE 583
> cpv:cgd1_250 ATP-dependent RNA helicase
Length=499
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query 39 LLQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEAR 98
++ Q + + +IFT T + L + L M + LH M Q +R+ +L KFR+ ++
Sbjct 306 VIDQNKIIKQGIIFTATKQQCQMLTSCLEIMGYSVTGLHSLMNQRRRLASLGKFRSKTSK 365
Query 99 ILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMY 158
+L AT V +RGLDIP V+FV+N+D P S +DYIHR+GR RA + G +LT VT+ DV
Sbjct 366 LLVATGVAARGLDIPDVEFVINYDFPRSFEDYIHRIGRVGRANKTGISLTFVTEQDVPYV 425
Query 159 QRIEFALGKKMEEYPDLPEEKAM-------VLHERALEALRETELELREADEEQSKKRKR 211
E + K+M E L E++ + V ++AL L E+ E ++E +++ +
Sbjct 426 YEFESKMKKEM-ELLKLDEDEVLKNMNRVTVAQQKALLMLE--EIGFNEKNQEARERKLK 482
Query 212 SQTHKRRKP 220
K + P
Sbjct 483 VLMSKNKIP 491
> pfa:PF13_0177 ATP-dependent RNA Helicase, putative; K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=490
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Query 8 ISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARKLAAFLR 67
++V+KK P L Q+++ + TY +L+ + N +IFT + L
Sbjct 279 VNVNKKQKPPKNLDQRYIYVEEIAHITYLIYILKNKVNNLSGIIFTANSYKCELVYTVLN 338
Query 68 HMAFEAV-CLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLS 126
+ + V +H Q R LAKF+ +IL AT++ SRG+DIP + FV+NFD P
Sbjct 339 MLGIDNVDAMHSSKDQKNRFATLAKFKNGLCKILVATDIISRGIDIPKISFVINFDFPND 398
Query 127 SKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEY 172
+ YIHRVGRTARA R G A++ + + DV + +++ + K++ Y
Sbjct 399 TVQYIHRVGRTARANRKGLAISFIDKKDVNSFNQVKNIMKDKLKPY 444
> tgo:TGME49_095010 ATP-dependent RNA helicase, putative
Length=698
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 6/202 (2%)
Query 24 FLLLPLKHKWTYAAALLQQQQN-CS-RIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQMT 81
++ +P + + Y LL+ CS R ++F + +++ L + A LH M
Sbjct 483 YMFVPTRMQPIYLLYLLEHTSPFCSDRGIVFAGSVRQTQQICTALEILKQSATPLHSLME 542
Query 82 QPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTARAG 141
Q +R+ L KFR+ +R+L T+V RGLD+P V+FV+N VP ++DY+HR GRTARAG
Sbjct 543 QRKRVACLEKFRSETSRLLICTDVAGRGLDLPRVEFVINMQVPGKAQDYVHRTGRTARAG 602
Query 142 RNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKAMVLHERALEALRETELELREA 201
R G ALT V V RIE + +++ P + E+ + + ++++ L L E
Sbjct 603 RKGVALTFVDPKSVRAVHRIEALINTQLQPLPSINEQDVLKFLSNYSKVVQKSLLFLNEI 662
Query 202 --DE--EQSKKRKRSQTHKRRK 219
DE EQ ++ ++ RRK
Sbjct 663 GFDEKAEQHEEYTKAFKEARRK 684
> hsa:55661 DDX27, DKFZp667N057, DRS1, FLJ12917, FLJ20596, FLJ22238,
MGC1018, MGC163147, PP3241, RHLP, Rrp3p, dJ686N3.1; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 27 (EC:3.6.4.13); K13181
ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=796
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAA--ALLQQQQNCSRIMIFTNTCLA 58
L P +I V+ T L Q+F+ + + A A L + +M+FT T
Sbjct 416 SLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQ 475
Query 59 ARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
A ++ L M + LHG ++Q QR+ AL +F+ + IL AT+V +RGLDI V V
Sbjct 476 AHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTV 535
Query 119 LNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRI 161
+NF +P + K Y+HRVGRTARAGR GR+++LV + + +M + I
Sbjct 536 INFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEI 578
> dre:378844 ddx27, cb843; DEAD (Asp-Glu-Ala-Asp) box polypeptide
27 (EC:3.6.4.13); K13181 ATP-dependent RNA helicase DDX27
[EC:3.6.4.13]
Length=776
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 4/164 (2%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLL-PLKH--KWTYAAALLQQQQNCSRIMIFTNTCL 57
L +P +I V+ T L Q+F+ + P K + AALL + +M+FT T
Sbjct 399 SLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALLTRTFQ-DHVMLFTQTKK 457
Query 58 AARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDF 117
A ++ L M + LHG ++Q QR+ +L +F+ + IL AT+V +RGLDI V
Sbjct 458 QAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKT 517
Query 118 VLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRI 161
V+NF +P + K Y+HRVGRTARAG+ GR+++LV + + +M + I
Sbjct 518 VINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETERKMLKEI 561
> tpv:TP03_0195 ATP-dependent RNA helicase; K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=839
Score = 106 bits (265), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L +P +D+ L F+ + K + LL + ++ I +F T
Sbjct 211 LNEPVLAKLDQDQHINEQLQMSFIFSRNEEKISVLLRLLAKHKDLKTI-VFVATRHHVEF 269
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
L + + C++G M R+ +++FR+ + RIL T+V SRGLDIP VD V+NF
Sbjct 270 FRTLLLKLGYSISCVYGTMDMDNRVIEMSRFRSNKTRILLVTDVASRGLDIPLVDLVINF 329
Query 122 DVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKM 169
D P S+K +IHRVGRTARAGR G A+++VT D +I + L K +
Sbjct 330 DFPYSTKLFIHRVGRTARAGRQGLAVSIVTNKDFSFLLQILYKLNKTL 377
> tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.99.1.3);
K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=983
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQ-QNCSRIMIFTNTCLAAR 60
L K C +S D L QFL + K LL+Q Q ++++F +T A
Sbjct 230 LEKECTLSDD--------LHMQFLFVRAAQKVPTLLFLLKQSIQKKEQVLVFASTRHQAT 281
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
L F +AF + ++G M Q +R+ LA F+ + +L T+V +RGLDIP + V+N
Sbjct 282 FLQCFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAARGLDIPHLPSVIN 341
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKM 169
FD P S+K ++HRVGRTARAGR+G A +LVT D+ + LG ++
Sbjct 342 FDFPSSAKLFVHRVGRTARAGRSGTAFSLVTGDDLPYAVELMSFLGGRL 390
> cel:F57B9.6 inf-1; INitiation Factor family member (inf-1);
K03257 translation initiation factor 4A
Length=402
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query 4 KPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKL 62
P +I V K T + +QF + K +W + L N ++ +IF NT L
Sbjct 226 NPIRILVKKDELTLEGI-RQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTL 284
Query 63 AAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFD 122
+ F CLHG M Q +R + +FR+ +R+L T++ +RG+D+ V V+N+D
Sbjct 285 TEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYD 344
Query 123 VPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPD 174
+P + ++YIHR+GR+ R GR G A+ VT+ D + IE ++EE P+
Sbjct 345 LPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPE 396
> pfa:PFF1500c DEAD/DEAH box ATP-dependent RNA helicase, putative;
K13179 ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=601
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L KP I V K AT L Q + L+ ++ L++ + +IM+F N C++ +
Sbjct 348 LQKPIFIEVTTKIATVERLQQGYALVDEDKRFLLLFTFLKKNMS-KKIMVFFNNCMSVQF 406
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
L ++ C+HG+ Q +R+ + F AA+ IL T V +RGLDIP V++++ +
Sbjct 407 YNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQY 466
Query 122 DVPLSSKDYIHRVGRTARA-GRNGRALTLVTQYDVEMYQRIEF 163
D P SK+YIHRVGRT R NG A+ + +++++ ++F
Sbjct 467 DPPDDSKEYIHRVGRTCRGQDSNGSAIIFLMKHELKFLNYLKF 509
> tpv:TP01_0765 eukaryotic translation initiation factor 4A; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=394
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + K +W + L + ++ +IF NT LA ++ FE +HG+
Sbjct 234 IKQFFISVEKEQWKFDTLCDLYESLIITQAVIFCNTKEKVDWLAKKMKDGNFEVCKMHGE 293
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M+Q +R + +FR E+R+L +T++ RGLD+ V V+N+D+P S + YIHR+GR+ R
Sbjct 294 MSQKERNDIMQRFRKGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGR 353
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 354 YGRKGVAINFVKDDDIRILRDIEQYYSTQIDEMP 387
> ath:AT5G65900 DEAD/DEAH box helicase, putative; K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=633
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query 1 CLVKPCKISVD--KKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLA 58
L P I VD +K T L Q + ++P + + L++ Q +IM+F +TC +
Sbjct 353 SLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKS 412
Query 59 ARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
+ A R++ F+ + + G + Q +R +F AE IL T V +RGLD P VD++
Sbjct 413 TKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWI 472
Query 119 LNFDVPLSSKDYIHRVGRTARA-GRNGRALTLVTQYDVEMYQRIEFA 164
+ +D P + DYIHRVGRTAR G G+AL ++T +++ Q ++ A
Sbjct 473 VQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQYLKAA 519
> bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=783
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 0/168 (0%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L P VDK L +F+ + K LL+ + R ++F +T
Sbjct 224 LRNPVIAQVDKDMQINEQLELRFIYSRTEDKVATLCRLLRNSNDTERTIVFVSTKHHVEF 283
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
A L ++G M R + F++ + R+L T++ +RGLD+P VD V+N+
Sbjct 284 FRALLAATGITVSAVYGSMDMTARSHQMGLFKSLKTRVLVVTDLAARGLDLPLVDCVINY 343
Query 122 DVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKM 169
D P SSK +IHRVGRTARAGR G A+++VT YD I A+G+KM
Sbjct 344 DFPHSSKLFIHRVGRTARAGRQGLAISIVTMYDFAYAFEILTAIGRKM 391
> xla:734505 ddx27, MGC114699; DEAD (Asp-Glu-Ala-Asp) box polypeptide
27; K13181 ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=758
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLL-PLKH--KWTYAAALLQQQQNCSRIMIFTNTCL 57
L P +I V+ T L Q+F+ + P + + A ALL + +M+FT T
Sbjct 379 SLRNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAVACALLTRTFQ-DHVMLFTQTKK 437
Query 58 AARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDF 117
A ++ L M + LHG ++Q QR+ AL +F+ + IL AT+V +RGLDI V
Sbjct 438 QAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIDGVKT 497
Query 118 VLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRI 161
V+N +P + K Y+HRVGRTARAG+ GR+++LV + + +M + I
Sbjct 498 VINLTMPGTVKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEI 541
> mmu:228889 Ddx27, C86129; DEAD (Asp-Glu-Ala-Asp) box polypeptide
27 (EC:3.6.4.13); K13181 ATP-dependent RNA helicase DDX27
[EC:3.6.4.13]
Length=760
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLL-PLKH--KWTYAAALLQQQQNCSRIMIFTNTCL 57
L P +I V+ T L Q+F+ + P + + AALL + +M+FT T
Sbjct 382 SLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRT-FTDHVMLFTQTKK 440
Query 58 AARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDF 117
A ++ L + + LHG ++Q QR+ AL +F+ + IL AT+V +RGLDI V
Sbjct 441 QAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 500
Query 118 VLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRI 161
V+NF +P + K Y+HRVGRTARAGR GR+++LV + + +M + I
Sbjct 501 VINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEI 544
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query 2 LVKPCKISVDKKTATPAVLLQQFL-LLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAAR 60
L P K+ + ++Q + ++ K+ LL+ + SRI++F +T
Sbjct 299 LYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCD 358
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
++ LR + A+ +HG +Q +R L++FR+ ++ I+TAT+V +RGLD+ V +V+N
Sbjct 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVIN 418
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVT 151
+D P S +DY+HR+GRT RAG G A T T
Sbjct 419 YDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
> tgo:TGME49_112990 ATP-dependent RNA helicase, putative (EC:5.99.1.3);
K13179 ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=569
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAALLQQQQNCSRIMIFTNTCLAARK 61
L KP + V AT + Q +++ P + ++ L++ + +IM+F ++C++ R
Sbjct 285 LKKPVFVEVKDTVATVRGIQQGYVVCPAEERFLLLFTFLKKNRE-KKIMVFFSSCMSVRF 343
Query 62 LAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNF 121
++ C+HG+ Q R+ F AE IL T+V +RGLDIP VD+++ +
Sbjct 344 HDELFNYIDLPTTCIHGKKKQNARMSTYYDFCNAEKGILLCTDVAARGLDIPKVDWIVQY 403
Query 122 DVPLSSKDYIHRVGRTAR-AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYPDLPEEKA 180
D P K+YIHRVGRTAR AG G+AL + ++ + ++ A G + EY P K
Sbjct 404 DPPDDPKEYIHRVGRTARGAGGTGKALLFLMAEEIGFLRYLKQA-GVPLNEY-TFPSNKI 461
Query 181 MVLHERALEALRETELELREADEE 204
+ + LE L E L +A ++
Sbjct 462 ANVQSQ-LERLIEKNYYLHKASQD 484
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + + L ++ ++F NT L ++ F +HG
Sbjct 239 IKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGD 298
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q R + +FRA R+L +T+V +RGLD+P V V+N+D+P + + YIHR+GR+ R
Sbjct 299 MEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGR 358
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V Q DV + + IE +++E P
Sbjct 359 FGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMP 392
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + + L ++ ++F NT L ++ F +HG
Sbjct 239 IKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGD 298
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q R + +FRA R+L +T+V +RGLD+P V V+N+D+P + + YIHR+GR+ R
Sbjct 299 MEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGR 358
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V Q DV + + IE +++E P
Sbjct 359 FGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMP 392
> bbo:BBOV_IV010990 23.m06251; eukaryotic initiation factor 4A-3
(eIF4A-3); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=395
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + K +W + L + ++ ++F NT LA ++ F +HG+
Sbjct 235 IKQFFVAVEKEQWKFDTLCDLYESLIITQAVVFCNTREKVDWLAKRMQDSNFTVCKMHGE 294
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M+Q +R + +FR E+R+L +T++ RGLD+ V V+N+D+P S ++YIHR+GR+ R
Sbjct 295 MSQKERNDIMQRFRRGESRVLISTDIWGRGLDVQQVSLVVNYDLPNSRENYIHRIGRSGR 354
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 355 YGRKGVAINFVKDDDIRILRDIEQYYSTQIDEMP 388
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 0/105 (0%)
Query 47 SRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVG 106
++ +IF T L +R + A+C+HG +QP+R L +FR+ +A IL AT+V
Sbjct 340 NKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVA 399
Query 107 SRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVT 151
SRGLD+ V FV+N+D P SS+DY+HR+GRTAR+ G A T T
Sbjct 400 SRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
> pfa:PFD1070w eukaryotic initiation factor, putative; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=390
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query 4 KPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAA-ALLQQQQNCSRIMIFTNTCLAARKL 62
KP KI V + T + +QF + K +W Y A L + ++ ++F NT + L
Sbjct 214 KPVKILVKRDELTLEGI-KQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMKVDWL 272
Query 63 AAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFD 122
+ F +H M+Q +R + KFR + R+L +T++ RGLD+ V V+N+D
Sbjct 273 TKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYD 332
Query 123 VPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
+P S + YIHR+GR+ R GR G A+ V D+++ + IE +++E P
Sbjct 333 LPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMP 383
> hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=731
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 0/105 (0%)
Query 47 SRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVG 106
++ +IF T L +R + A+C+HG +QP+R L +FR+ +A IL AT+V
Sbjct 419 NKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVA 478
Query 107 SRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVT 151
SRGLD+ V FV+N+D P SS+DY+HR+GRTAR+ G A T T
Sbjct 479 SRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 523
> cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA
helicase DDX27 [EC:3.6.4.13]
Length=763
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAA--ALLQQQQNCSRIMIFTNTCLA 58
L KP KI +++ T T L Q+F+ + + A A L + + ++F T
Sbjct 370 SLQKPVKIFINENTDTALKLRQEFIRIRAGRETDREAMVAALVTRTFQTNTIVFVRTKKD 429
Query 59 ARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFV 118
+++ L + + + +TQ QRI +L+KF+ AE +L +T++ SRGLDI V V
Sbjct 430 CQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTV 489
Query 119 LNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRI 161
+N ++P S K YIHRVGRTARAG+ GR+++LV + + ++ + I
Sbjct 490 INMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEI 532
> pfa:PFL1310c DEAD-box helicase; K12823 ATP-dependent RNA helicase
DDX5/DBP2 [EC:3.6.4.13]
Length=742
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 14/171 (8%)
Query 1 CLVKPCKISVDKKTATPAVLLQQFLLLP----LKHK---WTYAAALLQQQQNCSRIMIFT 53
C P KI + K T ++Q +++ +K K W L++ ++I+IF
Sbjct 554 CSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDW------LKENYENNKILIFC 607
Query 54 NTCLAARKLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIP 113
+T L LR+ + A+ +HG Q +R L ++ IL AT+V SRGLDI
Sbjct 608 DTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGLDIK 667
Query 114 AVDFVLNFDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFA 164
+ V+N+D+P + +DYIHR+GRT RAG+ G+++ L YD M Q+++FA
Sbjct 668 NISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSI-LFFSYDYYMPQKLKFA 717
> dre:100330671 eukaryotic translation initiation factor 4A-like;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + L ++ +IF NT L +R F +HG
Sbjct 246 IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD 305
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q +R + +FR+ +R+L +T+V +RGLD+P V ++N+D+P + + YIHR+GR+ R
Sbjct 306 MPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGR 365
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 366 YGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 399
> hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862,
NMP265, NUK34, eIF4AIII; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + L ++ +IF NT L +R F +HG
Sbjct 251 IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD 310
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q +R + +FR+ +R+L +T+V +RGLD+P V ++N+D+P + + YIHR+GR+ R
Sbjct 311 MPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGR 370
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 371 YGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
> mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF4A-III,
mKIAA0111; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + L ++ +IF NT L +R F +HG
Sbjct 251 IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD 310
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q +R + +FR+ +R+L +T+V +RGLD+P V ++N+D+P + + YIHR+GR+ R
Sbjct 311 MPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGR 370
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 371 YGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
> ath:AT3G19760 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative / DEAD box RNA helicase, putative;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=408
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query 2 LVKPCKISVDKKTATPAVLLQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAAR 60
+ +P KI V + T + +QF + K +W + L ++ +IF NT
Sbjct 230 MTEPVKILVKRDELTLEGI-KQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVD 288
Query 61 KLAAFLRHMAFEAVCLHGQMTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLN 120
L+ +R F +HG M Q +R + +FR+ ++R+L T+V +RG+D+ V V+N
Sbjct 289 YLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVIN 348
Query 121 FDVPLSSKDYIHRVGRTARAGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
+D+P + + YIHR+GR+ R GR G A+ V D+++ + IE +++E P
Sbjct 349 YDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMP 401
> xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp265,
nuk34; eukaryotic translation initiation factor 4A3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=414
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query 21 LQQFLLLPLKHKWTYAAAL-LQQQQNCSRIMIFTNTCLAARKLAAFLRHMAFEAVCLHGQ 79
++QF + + +W + L ++ +IF NT L +R F +HG
Sbjct 254 IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD 313
Query 80 MTQPQRIGALAKFRAAEARILTATEVGSRGLDIPAVDFVLNFDVPLSSKDYIHRVGRTAR 139
M Q +R + +FR+ +R+L +T+V +RGLD+P V ++N+D+P + + YIHR+GR+ R
Sbjct 314 MPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGR 373
Query 140 AGRNGRALTLVTQYDVEMYQRIEFALGKKMEEYP 173
GR G A+ V D+ + + IE +++E P
Sbjct 374 YGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 407
Lambda K H
0.322 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 7202251840
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40