bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0187_orf1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_065110 hypothetical protein ; K14799 pre-rRNA-proce... 226 5e-59
bbo:BBOV_I001620 19.m02052; protein of unknown function (DUF66... 189 9e-48
xla:495115 tsr1; TSR1, 20S rRNA accumulation, homolog; K14799 ... 184 2e-46
tpv:TP01_0015 hypothetical protein; K14799 pre-rRNA-processing... 183 4e-46
hsa:55720 TSR1, FLJ10534, KIAA1401, MGC131829; TSR1, 20S rRNA ... 180 4e-45
mmu:104662 Tsr1, AU040765, AW550801, mKIAA1401; TSR1, 20S rRNA... 174 2e-43
dre:325037 tsr1, MGC123319, fc52b09, wu:fc52b09, zgc:123319; T... 167 2e-41
ath:AT1G42440 hypothetical protein; K14799 pre-rRNA-processing... 162 1e-39
cpv:cgd5_1240 Tsr1p GTpase, multitransmembrane region protein ... 157 2e-38
cel:F10G7.1 tag-151; Temporarily Assigned Gene name family mem... 153 4e-37
pfa:PF14_0494 ribosome biogenesis protein tsr1, putative; K147... 140 4e-33
sce:YDL060W TSR1; Protein required for processing of 20S pre-r... 137 2e-32
cpv:cgd4_1480 BMS1 like GTpase involved in ribosome biogenesis... 82.8 8e-16
bbo:BBOV_III003460 17.m07327; hypothetical protein; K14569 rib... 82.0 1e-15
ath:AT1G06720 hypothetical protein; K14569 ribosome biogenesis... 77.8 2e-14
tgo:TGME49_113830 ribosome biogenesis protein BMS1, putative ;... 77.4 3e-14
pfa:PFA_0330w AARP2; pfAARP2 protein; K14569 ribosome biogenes... 77.0 4e-14
cel:Y61A9LA.10 hypothetical protein; K14569 ribosome biogenesi... 76.3 9e-14
dre:553241 bms1l, im:7152071, wu:fb37d08; BMS1-like, ribosome ... 72.0 1e-12
mmu:213895 Bms1, AA408648, AU020092, AU043373, BB007109, BC030... 70.9 3e-12
sce:YPL217C BMS1; Bms1p; K14569 ribosome biogenesis protein BMS1 70.5 4e-12
hsa:9790 BMS1, BMS1L, KIAA0187; BMS1 homolog, ribosome assembl... 68.6 1e-11
tpv:TP03_0062 hypothetical protein 55.1 2e-07
ath:AT2G44280 hypothetical protein 33.1 0.79
> tgo:TGME49_065110 hypothetical protein ; K14799 pre-rRNA-processing
protein TSR1
Length=1007
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 144/218 (66%), Gaps = 9/218 (4%)
Query 2 LLQHETQVAVVHSQLTFCD--DQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL +E V+VVH QLT + +K KD ++ CGFRRF + K
Sbjct 784 LLPYECAVSVVHLQLTRGGPYEGSLKGKDELIFNCGFRRFVVLGVSGSGSH-----TDKA 838
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
K + G + A++Y+P + PP ++ R ++ AWGSVL N S+RLII
Sbjct 839 KMLPFFHAGVSCVASLYAPTMYPPGSVVVFRKTEDSAQPFQVCAWGSVL--NSTSNRLII 896
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCK 179
KR++L+G+PFKVHRRKA+VR+MFFNP D+RWFTP+ELHTK+GLRGNIV+PLGTHGYMKCK
Sbjct 897 KRIVLTGYPFKVHRRKAVVRYMFFNPRDIRWFTPVELHTKKGLRGNIVQPLGTHGYMKCK 956
Query 180 FSDHLKQSDEVLLPLYRRVFPKWYPQSWGGLPTQQPLD 217
F+ ++KQ D V + LY+RVFPKWYP +WGG P P D
Sbjct 957 FNQYVKQDDTVCMYLYKRVFPKWYPPTWGGNPALLPTD 994
> bbo:BBOV_I001620 19.m02052; protein of unknown function (DUF663)
and AARP2CN (NUC121) domain containing protein; K14799
pre-rRNA-processing protein TSR1
Length=732
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 139/210 (66%), Gaps = 22/210 (10%)
Query 6 ETQVAVVHSQL--TFCDDQPIKSKDPMLMACGFRRFPASPIYS-----EEPRQGVRSAAK 58
E +V+V+ + +F + SK +L+ CGFRRFPA PIYS E R G+
Sbjct 532 ERKVSVISMNILRSFEGPDMVASKRDVLLYCGFRRFPAKPIYSQDIAAERGRFGI----- 586
Query 59 WKFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGAS-SRL 117
F R + G T TA++Y +LP +P + L D+ +P I +G + VNGA SR+
Sbjct 587 --FNRHIQKGHTATASIYGMALLPNTPIVAL--DAEDP---LIMLYGGI--VNGADPSRI 637
Query 118 IIKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMK 177
I+KR++L+G+PF+VH+R A+VR+MFF P D+++F P +LHTKRGL+G I EPLGTHGYMK
Sbjct 638 ILKRIVLTGYPFRVHKRMAVVRYMFFQPRDIKYFKPAQLHTKRGLQGIIKEPLGTHGYMK 697
Query 178 CKFSDHLKQSDEVLLPLYRRVFPKWYPQSW 207
C F+D ++Q D V L LY+RV+PKW+ +SW
Sbjct 698 CMFNDSIRQDDIVCLALYKRVYPKWFKESW 727
> xla:495115 tsr1; TSR1, 20S rRNA accumulation, homolog; K14799
pre-rRNA-processing protein TSR1
Length=815
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 137/203 (67%), Gaps = 11/203 (5%)
Query 2 LLQHETQVAVVHSQLTF--CDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL HE +++V++ + +++PIK+K+ ++ CGFRRF ASP++S+ SA K
Sbjct 595 LLPHEQKMSVMNMLVRRHPGNNEPIKAKEELIFHCGFRRFRASPLFSQHS-----SADKH 649
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
K +R+ +++ TVY+P+ PP+ ++ + + +L A GS+L VN R++I
Sbjct 650 KSERFLRSDTSVVVTVYAPITFPPASVLVFKQRYNGMQDL--VATGSLLNVN--PDRIVI 705
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCK 179
KR++LSGHPFK+ +R A+VR+MFFN +DV WF P+EL TK G RG+I EPLGTHG+MKC
Sbjct 706 KRIVLSGHPFKIMKRTAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCH 765
Query 180 FSDHLKQSDEVLLPLYRRVFPKW 202
F LK D VL+ LY+RV+PKW
Sbjct 766 FDGQLKSQDTVLMNLYKRVYPKW 788
> tpv:TP01_0015 hypothetical protein; K14799 pre-rRNA-processing
protein TSR1
Length=740
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 135/209 (64%), Gaps = 14/209 (6%)
Query 2 LLQHETQVAVVHSQLTFCDDQP--IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
+L +E +V+VV+ + + P + SK P+ + CGFRRFP+ PIYS+ V +
Sbjct 539 ILPYERKVSVVNFNVARTSEGPDLLPSKTPLNLFCGFRRFPSIPIYSKSI--NVDRGKRG 596
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGAS-SRLI 118
+ R+ + G AT+Y + PP+P + L D +G V+G+ R+I
Sbjct 597 LYDRFFKKGDNCVATIYGLSLCPPTPVLAL-------DQNETVLFGG--HVSGSEPCRII 647
Query 119 IKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKC 178
+KR+LL+G+P KVH+R+AIVR+MFFNP D+++F P++L TK+GLRG I++ LGTHG+MKC
Sbjct 648 MKRILLTGYPMKVHKRRAIVRYMFFNPSDIKYFKPVQLFTKKGLRGKILQSLGTHGHMKC 707
Query 179 KFSDHLKQSDEVLLPLYRRVFPKWYPQSW 207
FSD + Q D V LPLY+RVFPKW P +W
Sbjct 708 LFSDFITQDDIVCLPLYKRVFPKWNPHTW 736
> hsa:55720 TSR1, FLJ10534, KIAA1401, MGC131829; TSR1, 20S rRNA
accumulation, homolog (S. cerevisiae); K14799 pre-rRNA-processing
protein TSR1
Length=804
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 134/203 (66%), Gaps = 11/203 (5%)
Query 2 LLQHETQVAVVHSQLTF--CDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL HE +++V++ + + +P+K+K+ ++ CGFRRF ASP++S+ +A K
Sbjct 584 LLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHT-----AADKH 638
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
K +R+ L ATVY+P+ PP+ ++ + S+ +L A G ++ V+ R++I
Sbjct 639 KLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHSL--IATGHLMSVD--PDRMVI 694
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCK 179
KRV+LSGHPFK+ + A+VR+MFFN +DV WF P+EL TK G RG+I EPLGTHG+MKC
Sbjct 695 KRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCS 754
Query 180 FSDHLKQSDEVLLPLYRRVFPKW 202
F LK D VL+ LY+RVFPKW
Sbjct 755 FDGKLKSQDTVLMNLYKRVFPKW 777
> mmu:104662 Tsr1, AU040765, AW550801, mKIAA1401; TSR1, 20S rRNA
accumulation, homolog (yeast); K14799 pre-rRNA-processing
protein TSR1
Length=803
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 133/203 (65%), Gaps = 11/203 (5%)
Query 2 LLQHETQVAVVHSQLTFC--DDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL +E +++V++ ++ + +P+K+K+ ++ CGFRRF ASP++S+ +A K
Sbjct 583 LLPYEQKMSVLNMVVSRNPGNTEPVKAKEELIFHCGFRRFRASPLFSQHT-----AADKH 637
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
KF+R+ + TV++P+ PP+ ++ + + +L A G + V+ R++I
Sbjct 638 KFQRFLTADAAFVVTVFAPITFPPASVLLFKQRRNGMHSL--IATGHLFSVD--PDRMVI 693
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCK 179
KRV+LSGHPFK+ + A+VR+MFFN +DV WF P+EL TK G RG+I EPLGTHG+MKC
Sbjct 694 KRVVLSGHPFKIFTKMAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCS 753
Query 180 FSDHLKQSDEVLLPLYRRVFPKW 202
F LK D VL+ LY+RVFPKW
Sbjct 754 FDGKLKSQDTVLMNLYKRVFPKW 776
> dre:325037 tsr1, MGC123319, fc52b09, wu:fc52b09, zgc:123319;
TSR1, 20S rRNA accumulation, homolog (yeast); K14799 pre-rRNA-processing
protein TSR1
Length=822
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 11/203 (5%)
Query 2 LLQHETQVAVVHSQLTF--CDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL HE +++V++ + + +PIKSK+ ++ CGFRRF AS I+S+ + K
Sbjct 602 LLPHEQKMSVMNVLVRQHPSNTEPIKSKEELVFQCGFRRFRASAIFSQHT-----TGDKH 656
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
K +R+ P + + Y+P+ P + ++ + + +L A GS+L + R+++
Sbjct 657 KLERFLRPDAPTIMSFYAPITFPTAGVLVFKQRDNGMQDL--VATGSLLSCD--PRRVVL 712
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCK 179
KR++LSGHPFK++RR A+VR+MFFN DD+ WF P+EL TK G RG+I E LGTHG+MKC
Sbjct 713 KRIVLSGHPFKINRRSAVVRYMFFNRDDILWFKPVELRTKWGRRGHIKEALGTHGHMKCV 772
Query 180 FSDHLKQSDEVLLPLYRRVFPKW 202
F L+ D VL+ LY+RV+P W
Sbjct 773 FDSQLRSQDTVLMNLYKRVYPHW 795
> ath:AT1G42440 hypothetical protein; K14799 pre-rRNA-processing
protein TSR1
Length=793
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 138/211 (65%), Gaps = 15/211 (7%)
Query 2 LLQHETQVAVVHSQLTFCD--DQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LLQHE++++V+H + D + PIK+K+ ++ GFR+F A P+++ + S+ K
Sbjct 589 LLQHESKMSVLHFSVKKYDGYEAPIKTKEELMFHVGFRQFIARPVFATDNF----SSDKH 644
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLR-SDSSEPDNLRITAWGSVLPVNGASSRLI 118
K +R+ PG A++Y P+ PP P ++L+ S+ S+P I A GS+ V +++I
Sbjct 645 KMERFLHPGCFSLASIYGPISFPPLPLVVLKISEGSDPPA--IAALGSLKSVE--PNKII 700
Query 119 IKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKC 178
+K+++L+G+P +V + KA VR+MF NP+DV+WF P+E+ +K G RG + EP+GTHG MKC
Sbjct 701 LKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGAMKC 760
Query 179 KFSDHLKQSDEVLLPLYRRVFPKW----YPQ 205
F+ ++Q D V + LY+R +PKW YPQ
Sbjct 761 IFNGVVQQHDVVCMNLYKRAYPKWPERLYPQ 791
> cpv:cgd5_1240 Tsr1p GTpase, multitransmembrane region protein
; K14799 pre-rRNA-processing protein TSR1
Length=750
Score = 157 bits (398), Expect = 2e-38, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 135/231 (58%), Gaps = 29/231 (12%)
Query 2 LLQHETQVAVVHSQL--TFCDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
+L E +V V++ ++ T ++ IK+K P+++ GFRRF PI S PR + SA K
Sbjct 515 ILPFERKVGVMNFRIKRTAENNDLIKNKTPLVLQAGFRRFYICPIVSNCPR--ISSATKI 572
Query 60 KFKRWAEP------GSTLTATVYSPLVLPPSPCIM--LRSDSS-----------EPDNLR 100
+ + + G + YS +V PP P ++ LR +S +P N
Sbjct 573 ERTQILKQCKVLLHGDYYIISCYSTIVFPPCPILLFSLRDINSNSQNKITYKNFKPGNFT 632
Query 101 IT----AWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIEL 156
+ AWG +L + R+I+KR++L G+ FKV + KA+VR MF NP+DV+WF + L
Sbjct 633 LNDWPLAWGDIL--DADPYRVIVKRIVLVGNLFKVRKSKAVVRNMFNNPEDVKWFKSVGL 690
Query 157 HTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYRRVFPKWYPQSW 207
T+ G+RG I EPLG HGYMKC FS ++Q++ V +PLY+RVFPKW+P +W
Sbjct 691 RTRSGIRGIIREPLGMHGYMKCLFSRPIQQNEVVGMPLYKRVFPKWFPITW 741
> cel:F10G7.1 tag-151; Temporarily Assigned Gene name family member
(tag-151); K14799 pre-rRNA-processing protein TSR1
Length=785
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 21/210 (10%)
Query 1 QLLQHETQVAVVHSQLT--------FCDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQG 52
QLL HE +++V++ L DQ K + GFR+F A+ ++S
Sbjct 556 QLLPHEHKMSVLNMVLKKHPSCTIPITSDQNQK----FIFYVGFRQFEANAVFSSNT--- 608
Query 53 VRSAAKWKFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNG 112
K+K +R+ T ATVY+P+ P+ + R D L A GS+L N
Sbjct 609 --PGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKGRQEL--VATGSILDSN- 663
Query 113 ASSRLIIKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGT 172
R+++KR +L+GHP+K++RR +VR+MFFN +D+ WF P+EL+T G RG+I E +GT
Sbjct 664 -PDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFKPVELYTPSGRRGHIKEAVGT 722
Query 173 HGYMKCKFSDHLKQSDEVLLPLYRRVFPKW 202
HG MKC+F L D V+L LY+RVFP W
Sbjct 723 HGNMKCRFDQQLNAQDSVMLNLYKRVFPVW 752
> pfa:PF14_0494 ribosome biogenesis protein tsr1, putative; K14799
pre-rRNA-processing protein TSR1
Length=1029
Score = 140 bits (353), Expect = 4e-33, Method: Composition-based stats.
Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query 101 ITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKR 160
I A G V+ + R+I+KR+ L G FK+H++KA++R MF+NP D+ +F P+ELHTK
Sbjct 899 IVAHGKVVSCD--CKRIIMKRISLCGKIFKIHKKKAVIRNMFYNPKDINYFKPVELHTKH 956
Query 161 GLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYRRVFPKWYPQSWGGL----PTQQPL 216
GL G IVE LGTHG MKC FS+ LKQ D+V + LY+R++P W+P SWGG P QPL
Sbjct 957 GLTGKIVESLGTHGKMKCIFSNVLKQHDKVFIFLYKRIYPIWFPLSWGGEQDLGPDNQPL 1016
Query 217 D 217
+
Sbjct 1017 E 1017
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query 2 LLQHETQVAVVHSQLT---FCDDQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAK 58
LL E +V V++ ++ F D+ ++SKD + CGFR F P++SE+ +G +S K
Sbjct 721 LLPFERKVTVLNMEVNRTIFYSDK-VESKDIFEIICGFRHFIGCPVFSEQIIKGPQS--K 777
Query 59 WKFKRWAEPGSTLTATVYSPLVLPPSPCIMLR 90
K+++ + G A+++ + +P ++
Sbjct 778 GKYEKHLKHGKKYVASIFGFTTVTAAPVFFIK 809
> sce:YDL060W TSR1; Protein required for processing of 20S pre-rRNA
in the cytoplasm, associates with pre-40S ribosomal particles;
K14799 pre-rRNA-processing protein TSR1
Length=788
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 9/202 (4%)
Query 2 LLQHETQVAVVHSQLTFCD--DQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAK- 58
LL HE + AVV+ L + D+P+ S++P+++ G RR+ P++S QG S
Sbjct 584 LLLHEHKNAVVNFSLQRWEQYDKPVPSQEPIVVQYGVRRYTIQPLFS----QGSNSPNNV 639
Query 59 WKFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLI 118
K++R+ P + AT +P+ SP I + ++ N+ + G+ L N SR++
Sbjct 640 HKYERFLHPDTVSVATCIAPVDFTQSPAIFFKPSPTDAKNIELIGHGTFL--NADHSRIL 697
Query 119 IKRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKC 178
KR +L+GHPF+ H+ VR+MFF P+DV WF I L TK G G I E LGTHGY K
Sbjct 698 AKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFKSIPLFTKSGRSGFIKESLGTHGYFKA 757
Query 179 KFSDHLKQSDEVLLPLYRRVFP 200
F L D V + LY+R++P
Sbjct 758 TFDGKLSAQDVVAMSLYKRMWP 779
> cpv:cgd4_1480 BMS1 like GTpase involved in ribosome biogenesis
; K14569 ribosome biogenesis protein BMS1
Length=1051
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+KS D + + G+RRF + P+YS E R R ++ ++ T Y P++
Sbjct 719 LKSDDVLTFSIGWRRFQSIPLYSIEDRNETR----YRMLKYTPEHMHCYCTTYGPII--- 771
Query 84 SPC---IMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRF 140
PC I+ S N RI A G + + S+ I+K++ L G P K+H+ A +
Sbjct 772 -PCNFGILAIRSSERTSNFRIAATGVSVEMQAKSN--IVKKLKLVGEPKKIHKNTAFIHK 828
Query 141 MFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYRRVFP 200
MF + +V F ++ T G+RG + + + THG + F D + SD V + + P
Sbjct 829 MFNSDLEVSKFIGAKIQTVSGIRGQVKKAISTHGLFRATFEDKILLSDIVFCKTWVSMTP 888
Query 201 KWYPQSWGGLPT 212
+ + LPT
Sbjct 889 REFYNPVIDLPT 900
> bbo:BBOV_III003460 17.m07327; hypothetical protein; K14569 ribosome
biogenesis protein BMS1
Length=924
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+K+ DP+L + G+RRF + P+Y + R R K ++ A +Y+PL P
Sbjct 599 LKTNDPLLFSIGWRRFQSLPVYCMDERNNTR----IKMLKYTPEHMHCIANIYAPLAAPS 654
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+ ++ S P + RI+A G V+ N S I K++ + G+P+K+ + A ++ MF
Sbjct 655 LGVVAVKDWSRVP-HYRISATGVVVGTNQDFS--IKKKLKVQGYPYKILKHTAFIKDMFT 711
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLY 195
+ +V L T G+RG I +P+G +G + F D + SD VLL +
Sbjct 712 SELEVIKCLGSRLVTASGIRGEIKKPVGKNGAFRATFEDKILMSDIVLLKAF 763
> ath:AT1G06720 hypothetical protein; K14569 ribosome biogenesis
protein BMS1
Length=1147
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+K++DP++++ G+RR+ P+++ E R G + + ++ A+ + PLV P
Sbjct 806 LKTRDPIIVSIGWRRYQTIPVFAIEDRNG-----RHRMLKYTPEHMHCLASFWGPLVPPN 860
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+ + ++ S+ RITA VL N + I+K++ L G P K+ ++ A ++ MF
Sbjct 861 TGFVAFQNLSNNQAGFRITATSVVLEFNHQAR--IVKKIKLVGTPCKIKKKTAFIKDMFT 918
Query 144 NPDDVRWFTPIELHTKRGLRG-------NIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYR 196
+ ++ F + T G+RG N+++ G +C F D + SD V L +
Sbjct 919 SDLEIARFEGSSVRTVSGIRGQVKKAGKNMLDNKAEEGIARCTFEDQIHMSDMVFLRAWT 978
Query 197 RV-FPKWY----------PQSWGGLPT 212
V P++Y ++W G+ T
Sbjct 979 TVEVPQFYNPLTTALQPRDKTWNGMKT 1005
> tgo:TGME49_113830 ribosome biogenesis protein BMS1, putative
; K14569 ribosome biogenesis protein BMS1
Length=1267
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+KS D +L + G+RRF + P+Y+ E R S A+ ++ ++ + ++P + P
Sbjct 910 LKSDDVLLFSAGWRRFQSLPMYALEDR----SNARVRYLKYTPEHLHCLSYFWAPGLPPA 965
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+P + +R D+ N RI+A G VL + S + K++ L G P K+ + A ++ MF
Sbjct 966 TPILAIR-DTRATANFRISATGLVLQT--SPSVELSKKLKLLGEPKKIFKNTAFIKNMFN 1022
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYRRVFPKWY 203
+ +V ++ T G+RG + + LGT G + F D + SD V+ + ++ P+ +
Sbjct 1023 SDLEVNMCMGAKIQTVSGIRGQVKKALGTDGTFRATFEDKILMSDLVVCKTWIKMQPRQF 1082
Query 204 ------PQSWGGLPTQQPL 216
+ W L TQ +
Sbjct 1083 CNPVLDVEGWQRLRTQAEI 1101
> pfa:PFA_0330w AARP2; pfAARP2 protein; K14569 ribosome biogenesis
protein BMS1
Length=1434
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
++S DP++ + G+RR+ + PIYS R VR ++ ++ T Y PL
Sbjct 1105 LRSNDPLIFSVGWRRYQSIPIYSISERNNVR----LRYLKYTTEHMHCNCTFYGPLASVN 1160
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
S + L + P RI G ++ N + I+K++ L G P+K+ + A V+ MF
Sbjct 1161 SGILALYNYKKVP-FYRICINGLIIETNNNLN--IMKKLKLIGEPYKIFKNTAFVKNMFN 1217
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLLPLYRRV 198
+ +V F + T G++G I + +G +C F+D ++ SD V+L LY V
Sbjct 1218 SDLEVCKFLNCPVVTPSGIKGLIKNKINNNGDFRCTFADKIRMSDIVILKLYVNV 1272
> cel:Y61A9LA.10 hypothetical protein; K14569 ribosome biogenesis
protein BMS1
Length=1055
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query 2 LLQHETQVAVVHSQLTFCD--DQPIKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKW 59
LL E + VV +++ ++ +KS+DP++++CG+RRF IYS + +
Sbjct 686 LLPGEQNMGVVQARVKRHRWFERTLKSRDPLIISCGWRRFQTIAIYSVQDHN-----MRL 740
Query 60 KFKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLII 119
+F ++ A+ + P+ + + ++S + + RI A G VL ++ ++ ++
Sbjct 741 RFLKYTPEHMHCHASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQ--VV 798
Query 120 KRVLLSGHPFKVHRRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGT-HGYMKC 178
K++ L GHP K+ ++ A V+ MF + +V F + T G+RG I + + G +
Sbjct 799 KKLKLIGHPEKIFKKTAFVKGMFNSALEVAKFEGATIRTVAGIRGQIKKAIKAPEGAFRA 858
Query 179 KFSDHLKQSDEVLLPLYRRV-FPKWY 203
F D + D V L + V P++Y
Sbjct 859 TFEDKILMRDIVFLRSWVTVPIPRFY 884
> dre:553241 bms1l, im:7152071, wu:fb37d08; BMS1-like, ribosome
assembly protein (yeast); K14569 ribosome biogenesis protein
BMS1
Length=1221
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+K++DP++++ G+RRF P+Y E G + + ++ AT++ P+
Sbjct 876 LKTRDPLILSLGWRRFQTIPLYYIEDHNG-----RHRLLKYTPEHMHCGATIWGPITPQG 930
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+ + +++ N RI A G VL ++ + S I+K++ L G+P+K+ + ++ MF
Sbjct 931 TGFLAVQTIGGVKANFRIAATGVVLDLDKSVS--IVKKLKLIGYPYKIFKNTCFIQGMFN 988
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPLGT-HGYMKCKFSDHLKQSDEVLLPLYRRVFPKW 202
+V F + T G++G I + L T G + F D L SD V L W
Sbjct 989 TILEVAKFEGASIRTVSGIKGQIKKALRTPPGAFRATFEDRLLMSDIVFL-------RSW 1041
Query 203 YPQS 206
YP S
Sbjct 1042 YPVS 1045
> mmu:213895 Bms1, AA408648, AU020092, AU043373, BB007109, BC030906,
Bms1l, KIAA0187, mKIAA0187; BMS1 homolog, ribosome assembly
protein (yeast); K14569 ribosome biogenesis protein BMS1
Length=1284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+KS+DP++ + G+RRF P+Y E G + + ++ AT + P+
Sbjct 940 LKSRDPIIFSVGWRRFQTIPLYYIEDHNG-----RQRLLKYTPQHMHCGATFWGPITPQG 994
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+ + ++S S RI A G VL ++ S I+K++ L+G PFK+ + + ++ MF
Sbjct 995 TGFLAIQSVSGVMPEFRIAATGVVLDLD--KSIKIVKKLKLTGFPFKIFKNTSFIKGMFN 1052
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPL-GTHGYMKCKFSDHLKQSDEVLLPLYRRVFPKW 202
+ +V F + T G+RG I + L G + F D L SD V + W
Sbjct 1053 SALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRT-------W 1105
Query 203 YPQS 206
YP S
Sbjct 1106 YPVS 1109
> sce:YPL217C BMS1; Bms1p; K14569 ribosome biogenesis protein
BMS1
Length=1183
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTL-TATVYSPLVLP 82
+K+ DP++++ G+RRF PIY+ + K+ P T A Y PL P
Sbjct 839 LKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYT------PEHTYCNAAFYGPLCSP 892
Query 83 PSP-C-IMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRF 140
+P C + + ++S + RI A G V ++ + I+K++ L G P+K+ + A ++
Sbjct 893 NTPFCGVQIVANSDTGNGFRIAATGIVEEID--VNIEIVKKLKLVGFPYKIFKNTAFIKD 950
Query 141 MFFNPDDVRWFTPIELHTKRGLRGNIVEPLGT-HGYMKCKFSDHLKQSDEVLLPLYRRVF 199
MF + +V F ++ T G+RG I L G+ + F D + SD V+L
Sbjct 951 MFSSAMEVARFEGAQIKTVSGIRGEIKRALSKPEGHYRAAFEDKILMSDIVIL------- 1003
Query 200 PKWYP 204
WYP
Sbjct 1004 RSWYP 1008
> hsa:9790 BMS1, BMS1L, KIAA0187; BMS1 homolog, ribosome assembly
protein (yeast); K14569 ribosome biogenesis protein BMS1
Length=1282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query 24 IKSKDPMLMACGFRRFPASPIYSEEPRQGVRSAAKWKFKRWAEPGSTLTATVYSPLVLPP 83
+KS+DP++ + G+RRF P+Y E G + + ++ A + P+
Sbjct 936 LKSRDPIIFSVGWRRFQTIPLYYIEDHNG-----RQRLLKYTPQHMHCGAAFWGPITPQG 990
Query 84 SPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVHRRKAIVRFMFF 143
+ + ++S S + RI A G VL ++ S I+K++ L+G P+K+ + + ++ MF
Sbjct 991 TGFLAIQSVSGIMPDFRIAATGVVLDLD--KSIKIVKKLKLTGFPYKIFKNTSFIKGMFN 1048
Query 144 NPDDVRWFTPIELHTKRGLRGNIVEPL-GTHGYMKCKFSDHLKQSDEVLLPLYRRVFPKW 202
+ +V F + T G+RG I + L G + F D L SD V + W
Sbjct 1049 SALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRT-------W 1101
Query 203 YPQS 206
YP S
Sbjct 1102 YPVS 1105
> tpv:TP03_0062 hypothetical protein
Length=295
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query 73 ATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRLIIKRVLLSGHPFKVH 132
A +Y PL PP+ ++ + N RI+A GS+ V + I+K++ L G +K+
Sbjct 13 ANIYGPLS-PPNFGVLAVKNWDRISNYRISATGSI--VGTDQNYKIVKKLNLEGEAYKIM 69
Query 133 RRKAIVRFMFFNPDDVRWFTPIELHTKRGLRGNIVEPLGTHGYMKCKFSDHLKQSDEVLL 192
+ ++ MF + +V ++ T G+RG I +P+ +G + F D + SD V+L
Sbjct 70 KNTCFIKNMFNSELEVIKCIGSKIQTSSGIRGQIKKPIEKNGAFRATFEDKILLSDIVVL 129
> ath:AT2G44280 hypothetical protein
Length=462
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 0/57 (0%)
Query 61 FKRWAEPGSTLTATVYSPLVLPPSPCIMLRSDSSEPDNLRITAWGSVLPVNGASSRL 117
FK W GS L A +S + PC +L ++SS + L + + ++ + A++++
Sbjct 89 FKIWHAAGSLLVAISFSSVFGGCLPCSLLHNNSSTIETLSYSMFAAIFNIGWAATQV 145
Lambda K H
0.323 0.138 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 7009334380
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40