bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0191_orf3 Length=365 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_010960 replication factor C subunit, putative (EC:2... 482 1e-135 tpv:TP03_0432 replication factor C subunit 4; K10755 replicati... 408 1e-113 cpv:cgd3_1450 replication factor C like AAA+ ATpase ; K10755 r... 388 2e-107 bbo:BBOV_IV002210 21.m03053; replication factor C subunit 4; K... 377 3e-104 xla:431883 rfc2, MGC81391, rfc40; replication factor C (activa... 375 1e-103 mmu:19718 Rfc2, 2610008M13Rik, 40kDa, AI326953, MGC117486, Rec... 375 1e-103 dre:503748 rfc2, zgc:110810; replication factor C (activator 1... 372 9e-103 pfa:PFL2005w replication factor C subunit 4; K10755 replicatio... 362 1e-99 cel:F58F6.4 rfc-2; RFC (DNA replication factor) family member ... 350 4e-96 ath:AT1G63160 replication factor C 40 kDa, putative; K10755 re... 343 6e-94 sce:YOL094C RFC4; Rfc4p; K10755 replication factor C subunit 2/4 336 1e-91 hsa:5982 RFC2, A1, MGC3665, RFC40; replication factor C (activ... 313 6e-85 xla:398706 rfc4, rfc2; replication factor C (activator 1) 4, 3... 215 2e-55 hsa:5984 RFC4, A1, MGC27291, RFC37; replication factor C (acti... 214 4e-55 dre:445385 rfc5, zgc:110313; replication factor C (activator 1... 209 1e-53 xla:443952 MGC80325 protein; K10756 replication factor C subun... 207 5e-53 mmu:72151 Rfc5, 2610020K06Rik, 2610209F07Rik, 36.5kDa, 36kDa, ... 206 9e-53 xla:380369 rfc5, MGC53482; replication factor C (activator 1) ... 205 2e-52 dre:406435 rfc4, rcf4, zgc:64030; replication factor C (activa... 205 3e-52 tpv:TP04_0380 replication factor C subunit 3; K10756 replicati... 202 1e-51 mmu:106344 Rfc4, A1, AI894123, AU040575, RFC37; replication fa... 202 1e-51 tgo:TGME49_013000 activator 1 36 kDa, putative (EC:2.7.7.7); K... 199 1e-50 cpv:cgd8_2940 replication factor C like AAA ATpase ; K10755 re... 199 1e-50 sce:YNL290W RFC3; Rfc3p; K10756 replication factor C subunit 3/5 199 2e-50 ath:AT1G77470 replication factor C 36 kDA, putative; K10756 re... 197 5e-50 ath:AT1G21690 emb1968 (embryo defective 1968); ATP binding / A... 195 2e-49 cel:F44B9.8 ARPA; hypothetical protein; K10756 replication fac... 194 4e-49 sce:YJR068W RFC2; Rfc2p; K10755 replication factor C subunit 2/4 193 1e-48 bbo:BBOV_III002960 17.m07281; hypothetical protein; K10755 rep... 193 1e-48 pfa:PF14_0601 replication factor C3; K10756 replication factor... 191 3e-48 bbo:BBOV_II002510 18.m06203; replication factor C3 protein; K1... 191 4e-48 tpv:TP01_0978 replication factor C subunit 2; K10755 replicati... 188 3e-47 tgo:TGME49_037110 replication factor C small subunit, putative... 183 9e-46 pfa:PFB0840w replication factor C, subunit 2; K10755 replicati... 179 1e-44 cel:F31E3.3 rfc-4; RFC (DNA replication factor) family member ... 177 8e-44 cpv:cgd3_3170 replication factor RFC3 AAA+ ATpase ; K10756 rep... 169 1e-41 hsa:5985 RFC5, MGC1155, RFC36; replication factor C (activator... 140 8e-33 ath:AT5G27740 EMB2775 (EMBRYO DEFECTIVE 2775); DNA binding / n... 113 1e-24 xla:734626 rfc3, MGC115007; replication factor C (activator 1)... 110 8e-24 cel:C39E9.13 rfc-3; RFC (DNA replication factor) family member... 107 1e-22 hsa:5983 RFC3, MGC5276, RFC38; replication factor C (activator... 106 1e-22 mmu:69263 Rfc3, 2810416I22Rik, 38kDa, AU022547, Recc3; replica... 105 4e-22 dre:259256 rfc3, cb275; replication factor C (activator 1) 3; ... 103 1e-21 sce:YBR087W RFC5; Rfc5p; K10756 replication factor C subunit 3/5 102 2e-21 pfa:PF11_0117 replication factor C subunit 5, putative; K10756... 97.8 6e-20 cpv:cgd8_610 DNA replication repC1, AAA+ ATpase with a BRCT do... 94.0 8e-19 cpv:cgd2_3180 replication factor C subunit 5 ; K10756 replicat... 82.8 2e-15 pfa:PFB0895c replication factor C subunit 1, putative; K10754 ... 80.9 6e-15 ath:AT1G14460 DNA polymerase-related 79.7 2e-14 bbo:BBOV_IV003080 21.m02902; replication factor C 38 kDa subun... 79.0 3e-14 > tgo:TGME49_010960 replication factor C subunit, putative (EC:2.7.7.7); K10755 replication factor C subunit 2/4 Length=336 Score = 482 bits (1240), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 227/322 (70%), Positives = 270/322 (83%), Gaps = 0/322 (0%) Query 25 SSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPP 84 + S SG +SS+ +SIWIEKYRP+ LD+VVGND+V++RLRIIA EGNMPHL+LAGPP Sbjct 15 APQSQSGKDETSSTTLDSIWIEKYRPETLDDVVGNDQVMRRLRIIAREGNMPHLMLAGPP 74 Query 85 GTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKII 144 GTGKTSSVLCL + LL SRWR+ LELNASDER+IDV+R+++K FAKE+RDLP GRHKI+ Sbjct 75 GTGKTSSVLCLCKQLLGSRWRAYTLELNASDERTIDVIREKVKHFAKEKRDLPAGRHKIV 134 Query 145 ILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHL 204 ILDEVD+MTEAAQQALRRIME SDTTRFALACNSS+SVIEPLQSRCAILRF KL D+ L Sbjct 135 ILDEVDAMTEAAQQALRRIMEQFSDTTRFALACNSSASVIEPLQSRCAILRFRKLDDSQL 194 Query 205 VQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTP 264 V+RLR+VCA E + TDDGIEAIVF ADGDMRSALNNLQSTVS FG+VN+ENVEKVCD P Sbjct 195 VRRLRQVCAMEALQVTDDGIEAIVFCADGDMRSALNNLQSTVSAFGVVNRENVEKVCDNP 254 Query 265 PPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEF 324 PPE +R ++ +C+AG W A +A +L GYTP+DVV T R VL R ++E +EH+LLE+ Sbjct 255 PPEAVRSMLMECLAGKWREAHDIAAELLRRGYTPMDVVLTTRSVLSRFENECKEHILLEY 314 Query 325 LGIVGMTHMTMAGGLSTELQME 346 L VG+ HMTM+ GLST LQ+E Sbjct 315 LKYVGLAHMTMSAGLSTPLQLE 336 > tpv:TP03_0432 replication factor C subunit 4; K10755 replication factor C subunit 2/4 Length=324 Score = 408 bits (1049), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 182/318 (57%), Positives = 251/318 (78%), Gaps = 2/318 (0%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQS 102 IWIEKYRP LD+++GN E+ RL+ IA EGNMP+LLL GPPGTGKT+SVLCLAR LL + Sbjct 7 IWIEKYRPTTLDDIIGNPEITTRLQFIAKEGNMPNLLLCGPPGTGKTTSVLCLARELLGT 66 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 ++S +ELNASD+R +DVVR+ IK FAK+ LP +HKI+ILDEVDSMTE AQQALRR Sbjct 67 HFKSAVIELNASDDRGVDVVRESIKNFAKKSLVLPPNKHKIVILDEVDSMTEPAQQALRR 126 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 IMEL+S TTRFALACN S+ +IEP+QSRCA++R++KL D +++RL +C EN+T+TD+ Sbjct 127 IMELYSSTTRFALACNQSNKIIEPIQSRCAVIRYSKLQDEQILKRLVTICDMENLTYTDE 186 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 G+EA++FSADGD+R A+NNLQ +GF +V K+NV KVCD P P++++++++ C+ G+W Sbjct 187 GMEALLFSADGDLRRAVNNLQIVSAGFKVVTKDNVFKVCDIPSPDLIQKMLENCLNGNWR 246 Query 283 GAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGLSTE 342 A +L LG++P+D++ T R VL+ D+ EH+LLE++ V ++HMTM GLST+ Sbjct 247 QAHEKVDQLLELGHSPVDILVTMRNVLKTMDAP--EHVLLEYIKSVALSHMTMVNGLSTQ 304 Query 343 LQMEKMLAQLCKVAISFR 360 LQ+EK+LA LCK+A++ R Sbjct 305 LQLEKLLANLCKIALALR 322 > cpv:cgd3_1450 replication factor C like AAA+ ATpase ; K10755 replication factor C subunit 2/4 Length=339 Score = 388 bits (996), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 177/314 (56%), Positives = 242/314 (77%), Gaps = 2/314 (0%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQS 102 IWIEKYRP+ LDE+VGN+EVL RL+++A GNMP+LLL+GPPGTGKT+S+ CLA +L S Sbjct 17 IWIEKYRPKILDEMVGNEEVLTRLKVLAKHGNMPNLLLSGPPGTGKTTSIHCLASEMLGS 76 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 ++ LELNASD+R IDVVRD+IK+FA+E+ DLP GRHKI+ILDEVDSMT++AQQALRR Sbjct 77 KYGRAVLELNASDDRGIDVVRDKIKSFAREKIDLPEGRHKIVILDEVDSMTDSAQQALRR 136 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 +ME++S++TRFALACN S+ +IEP+QSRCAI+R++KL+DA + +RL E+ EN+ + D Sbjct 137 LMEVYSESTRFALACNQSTKIIEPIQSRCAIIRYSKLTDAQIRKRLFEIIKMENIPYVDS 196 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 GI+ +VF+ADGDMR +NNLQ+T GF +V+++NV KV D P PE ++ I+ CV +W Sbjct 197 GIDTLVFTADGDMRIVINNLQATYHGFSMVSRDNVLKVSDIPSPEKIKSILDSCVKCNWR 256 Query 283 GAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGLSTE 342 A S+ + GY+PLD+V T R VL+R +L E +LE+L VG H M G +T Sbjct 257 LAHSIVEELFIGGYSPLDIVITMRNVLKRY--QLPERAILEYLKEVGRCHFVMLDGCATP 314 Query 343 LQMEKMLAQLCKVA 356 LQ++K+L QLC ++ Sbjct 315 LQLDKLLGQLCMIS 328 > bbo:BBOV_IV002210 21.m03053; replication factor C subunit 4; K10755 replication factor C subunit 2/4 Length=306 Score = 377 bits (969), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 172/304 (56%), Positives = 232/304 (76%), Gaps = 2/304 (0%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQS 102 IWIEKYRP L +V+GN EV +RL +IA EGNMP+LLL GPPGTGKT+S+LCLA +L + Sbjct 5 IWIEKYRPGILKDVIGNPEVTRRLEVIAREGNMPNLLLCGPPGTGKTTSILCLAHEMLGN 64 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 +++ LELNASD+R +DVVR IK FAK+ LP +HKIIILDEVDSMTEAAQQALRR Sbjct 65 HFKNAVLELNASDDRGVDVVRGAIKNFAKKSVVLPPNKHKIIILDEVDSMTEAAQQALRR 124 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 IME++S TTRFALACN S+ +IEP+QSRCA++R+ L D ++ RL +C +ENV +T+D Sbjct 125 IMEIYSKTTRFALACNQSTKIIEPIQSRCAVIRYEPLQDEMILTRLIHICKEENVQYTND 184 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 G+EA++F+A+GDMR A+NNLQ+ SG+ L+ +NV KVCD P PE++R+++Q C+ G W Sbjct 185 GMEALLFTANGDMRRAVNNLQNVSSGYNLITSQNVYKVCDVPSPELIRKLLQDCLDGQWR 244 Query 283 GAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGLSTE 342 A A +L+LG++P D++ T R VL+ + EH+L EFL + ++HMTM GLS+ Sbjct 245 PAHEKAEDLLALGHSPFDILMTVRSVLKTLKAP--EHILCEFLKTISLSHMTMISGLSSP 302 Query 343 LQME 346 LQ+E Sbjct 303 LQLE 306 > xla:431883 rfc2, MGC81391, rfc40; replication factor C (activator 1) 2, 40kDa; K10755 replication factor C subunit 2/4 Length=348 Score = 375 bits (964), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 180/342 (52%), Positives = 249/342 (72%), Gaps = 4/342 (1%) Query 18 SSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPH 77 S++ SG+ ++ + S + + E W+EKYRP L+E+VGN+E + RL + A EGN+P+ Sbjct 8 SAAGESGTKQAAPATKSLAVT-YELPWVEKYRPLKLNEIVGNEETVSRLEVFAREGNVPN 66 Query 78 LLLAGPPGTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLP 137 +++AGPPGTGKT+S+LCLARALL + LELNAS++R IDVVR++IK FA+++ LP Sbjct 67 IIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 126 Query 138 LGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFT 197 GRHKIIILDE DSMT+ AQQALRR ME++S TTRFALACN+S +IEP+QSRCA+LR+T Sbjct 127 KGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYT 186 Query 198 KLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENV 257 KL+DA ++ RL +V KE V TDDG+EAIVF+A GDMR ALNN+QST +GFG VN NV Sbjct 187 KLTDAQVLARLMDVVEKEKVQCTDDGLEAIVFTAQGDMRQALNNVQSTCAGFGFVNSTNV 246 Query 258 EKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQ 317 KVCD P P +++ ++Q CV + A + + LGY+P D++ V + ++ Sbjct 247 FKVCDEPHPLLVKEMLQHCVNANIDEAYKIVAHLWKLGYSPEDIIGNIFRVCK--TFQMP 304 Query 318 EHLLLEFLGIVGMTHMTMAGGLSTELQMEKMLAQLC-KVAIS 358 E+L LEF+ +G THM +A G+++ LQM +LA+LC K A+S Sbjct 305 EYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAVS 346 > mmu:19718 Rfc2, 2610008M13Rik, 40kDa, AI326953, MGC117486, Recc2; replication factor C (activator 1) 2; K10755 replication factor C subunit 2/4 Length=349 Score = 375 bits (963), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 180/338 (53%), Positives = 243/338 (71%), Gaps = 8/338 (2%) Query 23 SGSSSSSSGSS------SSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMP 76 SG S SG+ S ++ E W+EKYRP L+E+VGN++ + RL + A EGN+P Sbjct 6 SGCDPSESGAQEPSPVPSKTAGHYELPWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVP 65 Query 77 HLLLAGPPGTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDL 136 ++++AGPPGTGKT+S+LCLARALL + LELNAS++R IDVVR++IK FA+++ L Sbjct 66 NIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL 125 Query 137 PLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRF 196 P GRHKIIILDE DSMT+ AQQALRR ME++S TTRFALACN+S +IEP+QSRCA+LR+ Sbjct 126 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 185 Query 197 TKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKEN 256 TKL+DA ++ RL V KE V +TDDG+EAI+F+A GDMR ALNNLQST SGFG +N EN Sbjct 186 TKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSEN 245 Query 257 VEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSEL 316 V KVCD P P +++ ++Q CV + A + + LGY+P DV+ V + + Sbjct 246 VFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTF--PM 303 Query 317 QEHLLLEFLGIVGMTHMTMAGGLSTELQMEKMLAQLCK 354 E+L LEF+ +G THM +A G+++ LQM +LA+LC+ Sbjct 304 AEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQ 341 > dre:503748 rfc2, zgc:110810; replication factor C (activator 1) 2; K10755 replication factor C subunit 2/4 Length=349 Score = 372 bits (956), Expect = 9e-103, Method: Compositional matrix adjust. Identities = 172/338 (50%), Positives = 242/338 (71%), Gaps = 2/338 (0%) Query 17 SSSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMP 76 S + + G + +++ E W+EKYRP L+E+VGN+E + RL + A EGN+P Sbjct 6 SEQTQADGPPKKDETAPKPTTTAYELPWVEKYRPLKLNEIVGNEETVSRLEVFAREGNVP 65 Query 77 HLLLAGPPGTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDL 136 ++++AGPPGTGKT+S+LCLARALL + LELNAS++R IDVVR++IK FA+++ L Sbjct 66 NIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL 125 Query 137 PLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRF 196 P GRHKIIILDE DSMT+ AQQALRR ME++S TTRFALACN+S +IEP+QSRCA+LR+ Sbjct 126 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 185 Query 197 TKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKEN 256 +KL D ++ RL EV KEN+ T+DG+EAI+F+A GDMR ALNNLQST SGFG +N EN Sbjct 186 SKLRDEQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNSGFGYINSEN 245 Query 257 VEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSEL 316 V KVCD P P +++ +++ CV + A + + SLGY+P D++ V + ++ Sbjct 246 VFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFRVCK--TFQM 303 Query 317 QEHLLLEFLGIVGMTHMTMAGGLSTELQMEKMLAQLCK 354 E+L LE++ +G THM +A G+++ LQM +L +LC+ Sbjct 304 AEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCR 341 > pfa:PFL2005w replication factor C subunit 4; K10755 replication factor C subunit 2/4 Length=336 Score = 362 bits (930), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 232/321 (72%), Gaps = 1/321 (0%) Query 40 NESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL 99 N IWIEKYRP+ LDEVVGN V+ L+ I GNMP+LLLAG PGTGKT+S+LCLA + Sbjct 14 NIDIWIEKYRPEFLDEVVGNPFVINTLKSIITSGNMPNLLLAGAPGTGKTTSILCLASEM 73 Query 100 LQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQA 159 L ++ + LELNASD+R I+V+RDRIK+FAKE LP G+HKIIILDEVDSMT AAQQ+ Sbjct 74 LGNQAKKAVLELNASDDRGINVIRDRIKSFAKEIISLPPGKHKIIILDEVDSMTTAAQQS 133 Query 160 LRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTF 219 LRRIMEL+SDTTRFALACN S +I+ LQSRCAI+R+ KLSD +++R+ ++C EN+ + Sbjct 134 LRRIMELYSDTTRFALACNQSEKIIDALQSRCAIIRYFKLSDDQVLKRILKICDLENIKY 193 Query 220 TDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAG 279 TDDG++A+ F ADGD+R A+N LQST +G ++NKENV +CD P PE + +++ CV Sbjct 194 TDDGLDALTFIADGDLRKAVNCLQSTYAGLEVINKENVLHICDIPSPERIENLLKHCVNS 253 Query 280 DWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGL 339 +W A +A ++ G+TP D+ T VLRR + E + +EFL I M TMA GL Sbjct 254 EWKKAHDIAYSMIKEGHTPYDISLTSSNVLRRFNIG-SEVIQIEFLKIGAMACNTMATGL 312 Query 340 STELQMEKMLAQLCKVAISFR 360 ++ +Q++K+LA C A R Sbjct 313 TSVIQLDKLLADWCMAAKILR 333 > cel:F58F6.4 rfc-2; RFC (DNA replication factor) family member (rfc-2); K10755 replication factor C subunit 2/4 Length=334 Score = 350 bits (898), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 162/324 (50%), Positives = 231/324 (71%), Gaps = 2/324 (0%) Query 34 SSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVL 93 S S + W+EKYRP+ L ++VGN+ +++RL++I EGN+P+++L+GPPG GKT+SV Sbjct 2 SKSEKQQLAPWVEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSVW 61 Query 94 CLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMT 153 LAR LL + + LELNASDER IDVVR RIK FA+ + LP GRHKIIILDE DSMT Sbjct 62 ALARELLGDKVKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADSMT 121 Query 154 EAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCA 213 + AQQALRR ME+++ TTRFALACN S +IEP+QSRCA+LR+TKLS L+ R++EV Sbjct 122 DGAQQALRRTMEMYTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAK 181 Query 214 KENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIM 273 E V + D G+EAI+F+A GDMR ALNNLQ+TV+ + LVNKENV KVCD P P+++ +++ Sbjct 182 AEKVNYDDGGLEAILFTAQGDMRQALNNLQATVNAYELVNKENVLKVCDEPHPDLMIKML 241 Query 274 QQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRAD--SELQEHLLLEFLGIVGMT 331 C ++ A + LG++ D+V+T V++ + + E L +E++ + M Sbjct 242 HYCTDRKFFEASKIIHEFHRLGFSSDDIVSTLFRVVKTVELSKNVSEQLRMEYIRQIAMC 301 Query 332 HMTMAGGLSTELQMEKMLAQLCKV 355 HM + GL+++LQ+ +++A LC+V Sbjct 302 HMRIVQGLTSKLQLSRLIADLCRV 325 > ath:AT1G63160 replication factor C 40 kDa, putative; K10755 replication factor C subunit 2/4 Length=333 Score = 343 bits (880), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 159/317 (50%), Positives = 230/317 (72%), Gaps = 2/317 (0%) Query 39 GNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARA 98 G W+EKYRP + ++VGN++ + RL++IA +GNMP+L+L+GPPGTGKT+S+L LA Sbjct 12 GYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 71 Query 99 LLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQ 158 LL + ++ LELNASD+R IDVVR++IK FA+++ LP GRHK++ILDE DSMT AQQ Sbjct 72 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131 Query 159 ALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVT 218 ALRR +E++S++TRFALACN+S+ +IEP+QSRCA++RF++LSD ++ RL V A E V Sbjct 132 ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVP 191 Query 219 FTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVA 278 + +G+EAI+F+ADGDMR ALNNLQ+T SGF VN+ENV KVCD P P ++ I++ + Sbjct 192 YVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLE 251 Query 279 GDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGG 338 + A + + LGY+P D++TT +++ D + E+L LEF+ G HM + G Sbjct 252 SKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYD--MAEYLKLEFMKETGFAHMRICDG 309 Query 339 LSTELQMEKMLAQLCKV 355 + + LQ+ +LA+L V Sbjct 310 VGSYLQLCGLLAKLSIV 326 > sce:YOL094C RFC4; Rfc4p; K10755 replication factor C subunit 2/4 Length=323 Score = 336 bits (861), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 161/314 (51%), Positives = 234/314 (74%), Gaps = 7/314 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRPQ L ++VGN E + RL+ IA +GNMPH++++G PG GKT+SV CLA LL Sbjct 11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRRI 163 + LELNASD+R IDVVR++IK FA+++ LP G+HKI+ILDE DSMT AQQALRR Sbjct 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 Query 164 MELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDG 223 MEL+S++TRFA ACN S+ +IEPLQSRCAILR++KLSD +++RL ++ E+V +T+DG Sbjct 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 Query 224 IEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYG 283 +EAI+F+A+GDMR A+NNLQSTV+G GLVN +NV K+ D+P P ++++++ +A + Sbjct 191 LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML---LASNLED 247 Query 284 AQSVARVIL-SLGYTPLDVVTT-FRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGLST 341 + + R L GY+ +D+VTT FR + + ++++E + LE + +G+THM + G+ T Sbjct 248 SIQILRTDLWKKGYSSIDIVTTSFR--VTKNLAQVKESVRLEMIKEIGLTHMRILEGVGT 305 Query 342 ELQMEKMLAQLCKV 355 LQ+ MLA++ K+ Sbjct 306 YLQLASMLAKIHKL 319 > hsa:5982 RFC2, A1, MGC3665, RFC40; replication factor C (activator 1) 2, 40kDa; K10755 replication factor C subunit 2/4 Length=320 Score = 313 bits (802), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 156/344 (45%), Positives = 221/344 (64%), Gaps = 37/344 (10%) Query 12 AMNGSSSSSSSSGSSSSSSGSSSSSSSGNESI-WIEKYRPQALDEVVGNDEVLQRLRIIA 70 A+ G + + S + + S + S+G+ + W+EKYRP L+E+VGN++ + RL + A Sbjct 5 AVCGGAGEVEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFA 64 Query 71 LEGNMPHLLLAGPPGTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFA 130 EGN+P++++AGPPGTGKT+S+LCLARALL + LELNAS+ Sbjct 65 REGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASN--------------- 109 Query 131 KERRDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSR 190 DSMT+ AQQALRR ME++S TTRFALACN+S +IEP+QSR Sbjct 110 -------------------DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSR 150 Query 191 CAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFG 250 CA+LR+TKL+DA ++ RL V KE V +TDDG+EAI+F+A GDMR ALNNLQST SGFG Sbjct 151 CAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFG 210 Query 251 LVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLR 310 +N ENV KVCD P P +++ ++Q CV + A + + LGY+P D++ V + Sbjct 211 FINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCK 270 Query 311 RADSELQEHLLLEFLGIVGMTHMTMAGGLSTELQMEKMLAQLCK 354 ++ E+L LEF+ +G THM +A G+++ LQM +LA+LC+ Sbjct 271 T--FQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQ 312 > xla:398706 rfc4, rfc2; replication factor C (activator 1) 4, 37kDa; K10755 replication factor C subunit 2/4 Length=363 Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 14/337 (4%) Query 25 SSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPP 84 +S+S +GS+ S W+EKYRP+ +DEV DEV+ L+ ++P+LL GPP Sbjct 20 ASASGTGSTGESKKQKPIPWVEKYRPKCVDEVAFQDEVVAVLKKSLQGADLPNLLFYGPP 79 Query 85 GTGKTSSVLCLARALLQSR-WRSCCLELNASDERSIDVVRDRIKAFAK-----ERRD-LP 137 GTGKTS++L +R L +R LELNASDER I VVR+++K FA+ R D P Sbjct 80 GTGKTSTILAASRELYGPELFRQRVLELNASDERGIQVVREKVKNFAQLTVGGTRSDGKP 139 Query 138 LGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFT 197 KIIILDE DSMT AAQ ALRR ME S TTRF L CN S +IEPL SRC+ RF Sbjct 140 CPPFKIIILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFK 199 Query 198 KLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQST--VSGFGLVNKE 255 L+D QRL +C KENV T++ I +V ++GD+R A+ LQS ++ + +E Sbjct 200 PLADKIQTQRLLSICEKENVQITNEAISCLVEVSEGDLRKAITFLQSAARLTRGKEITEE 259 Query 256 NVEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGV-LRRAD- 313 V ++ P E L ++ C +G + ++ + +++ G+ +V V L R D Sbjct 260 IVTEIAGVVPKETLDSVLVVCQSGSFEKLENFVKDLINNGHAATQLVNQLHDVILERGDL 319 Query 314 SELQEHLLLEFLGIVGMTHMTMAGGLSTELQMEKMLA 350 ++ Q+ + E L V + G LQM + A Sbjct 320 TDKQKAFITEKLADV---DKCLTDGADEYLQMLGLFA 353 > hsa:5984 RFC4, A1, MGC27291, RFC37; replication factor C (activator 1) 4, 37kDa; K10755 replication factor C subunit 2/4 Length=363 Score = 214 bits (545), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 190/330 (57%), Gaps = 15/330 (4%) Query 27 SSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEG-NMPHLLLAGPPG 85 ++S+GSS + W+EKYRP+ +DEV +EV+ L+ +LEG ++P+LL GPPG Sbjct 23 AASAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKK-SLEGADLPNLLFYGPPG 81 Query 86 TGKTSSVLCLARALLQSR-WRSCCLELNASDERSIDVVRDRIKAFAK-----ERRD-LPL 138 TGKTS++L AR L +R LELNASDER I VVR+++K FA+ R D P Sbjct 82 TGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPC 141 Query 139 GRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTK 198 KI+ILDE DSMT AAQ ALRR ME S TTRF L CN S +IEPL SRC+ RF Sbjct 142 PPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKP 201 Query 199 LSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQST--VSGFGLVNKEN 256 LSD QRL ++ KENV +D+GI +V ++GD+R A+ LQS ++G + ++ Sbjct 202 LSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKV 261 Query 257 VEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRAD-SE 315 + + P E + + C +G + ++V + ++ G+ +V V+ + S+ Sbjct 262 ITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVENNLSD 321 Query 316 LQEHLLLEFLGIVGMTHMTMAGGLSTELQM 345 Q+ ++ E L V +A G LQ+ Sbjct 322 KQKSIITEKLAEV---DKCLADGADEHLQL 348 > dre:445385 rfc5, zgc:110313; replication factor C (activator 1) 5; K10756 replication factor C subunit 3/5 Length=334 Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 180/316 (56%), Gaps = 9/316 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRPQ LD+++ + ++L ++ E +PHLL GPPGTGKTS++L AR L + + Sbjct 16 WVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGKTSTILACARQLYKDK 75 Query 104 -WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 + S LELNASD+R IDVVR I +FA R G K++ILDE D+MT+ AQ ALRR Sbjct 76 EFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRR 134 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 ++E ++ TRF L CN S +I LQSRC RF LS ++ RL V +E++ T D Sbjct 135 VIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQMIPRLEHVIQQESIDITPD 194 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 G++AIV + GDMR +LN LQST +G V +E V P + I+ + D+ Sbjct 195 GMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSDIANILDWALNKDFT 254 Query 283 GAQSVARVILSL-GYTPLDVVTTFRGVLRRAD--SELQEHLLLEFLGIVGMTHMTMAGGL 339 A + + +L G D++T ++ R D ++ LL++ I +A G Sbjct 255 TAYNQILELKTLKGLALHDILTEVHLLIHRVDFPPSIRMGLLIKLADI----EYRLASGT 310 Query 340 STELQMEKMLAQLCKV 355 S ++Q+ M+A V Sbjct 311 SEKIQLSSMVAAFQAV 326 > xla:443952 MGC80325 protein; K10756 replication factor C subunit 3/5 Length=335 Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 119/311 (38%), Positives = 179/311 (57%), Gaps = 9/311 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRPQ LDE++ + ++L ++ E +PHLL GPPGTGKTS++L A+ L + R Sbjct 17 WVEKYRPQTLDELISHQDILSTIQRFISEDKLPHLLFYGPPGTGKTSTILACAKQLYKDR 76 Query 104 -WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 + S LELNASD+R ID+VR + +FA R G K++ILDE D+MT+ AQ ALRR Sbjct 77 EFNSMVLELNASDDRGIDIVRGPVLSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRR 135 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 ++E ++ TRF L CN S +I LQSRC RF LS ++ RL V +E+V + D Sbjct 136 VIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSSEMMIPRLEHVVKEEHVDISPD 195 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 G++A+V ++GDMR +LN LQST + V ++ V P + I+ + D+ Sbjct 196 GMKALVTLSNGDMRRSLNILQSTNMAYSKVTEDTVYTCTGHPLRSDIANILDWMLNKDFT 255 Query 283 GAQSVARVILSL-GYTPLDVVTTFRGVLRRAD--SELQEHLLLEFLGIVGMTHMTMAGGL 339 A + +L G D++T + R D + ++ HLL++ I +A G Sbjct 256 SAYKNIMELKTLKGLALHDILTEIHLYVHRVDFPALVRIHLLVKMADI----EYRLASGT 311 Query 340 STELQMEKMLA 350 S ++Q+ M+A Sbjct 312 SEKIQLSSMIA 322 > mmu:72151 Rfc5, 2610020K06Rik, 2610209F07Rik, 36.5kDa, 36kDa, MGC113787, Recc5; replication factor C (activator 1) 5; K10756 replication factor C subunit 3/5 Length=339 Score = 206 bits (525), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 122/330 (36%), Positives = 188/330 (56%), Gaps = 9/330 (2%) Query 25 SSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPP 84 ++++ S +++ W+EKYRPQ L +++ + ++L ++ E +PHLLL GPP Sbjct 2 TAAAPSQQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPP 61 Query 85 GTGKTSSVLCLARALLQSR-WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKI 143 GTGKTS++L A+ L + + + S LELNASD+R ID+VR I +FA R G K+ Sbjct 62 GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG-FKL 120 Query 144 IILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAH 203 +ILDE D+MT+ AQ ALRR++E ++ TRF L CN S +I LQSRC RF L+ Sbjct 121 VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL 180 Query 204 LVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDT 263 +V RL V +ENV ++DG++A+V + GDMR ALN LQST FG V +E V Sbjct 181 MVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH 240 Query 264 PPPEMLRRIMQQCVAGDWYGA-QSVARVILSLGYTPLDVVTTFRGVLRRAD--SELQEHL 320 P + I+ + D+ A +++ + G D++T + R D S ++ HL Sbjct 241 PLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHL 300 Query 321 LLEFLGIVGMTHMTMAGGLSTELQMEKMLA 350 L + I ++ G S ++Q+ ++A Sbjct 301 LTKMADI----EYRLSVGTSEKIQLSSLIA 326 > xla:380369 rfc5, MGC53482; replication factor C (activator 1) 5, 36.5kDa; K10756 replication factor C subunit 3/5 Length=335 Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 9/311 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRPQ LD+++ + ++L ++ E +PHLL GPPGTGKTS++L A+ L + R Sbjct 17 WVEKYRPQTLDDLISHQDILSTIQRFISEDKLPHLLFYGPPGTGKTSTILACAKQLYKDR 76 Query 104 -WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRR 162 + S LELNASD+R ID+VR I +FA R G K++ILDE D+MT+ AQ ALRR Sbjct 77 EFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRR 135 Query 163 IMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDD 222 ++E ++ TRF L CN S +I LQSRC RF LS ++ RL V +E V + D Sbjct 136 VIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSSDMMIPRLEHVVKEERVDISPD 195 Query 223 GIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWY 282 G++A+V ++GDMR +LN LQST +G V ++ V P + I+ + D+ Sbjct 196 GMKALVTLSNGDMRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRSDIANILDWMLNKDFT 255 Query 283 GAQSVARVILSL-GYTPLDVVTTFRGVLRRAD--SELQEHLLLEFLGIVGMTHMTMAGGL 339 A + +L G D++T + R + + ++ HLL++ I +A G Sbjct 256 SAYKNIMELKTLKGLALHDILTEVHLYVHRVNFPASVRMHLLVKMADI----EYRLASGT 311 Query 340 STELQMEKMLA 350 S ++Q+ ++A Sbjct 312 SEKIQLSSLIA 322 > dre:406435 rfc4, rcf4, zgc:64030; replication factor C (activator 1) 4; K10755 replication factor C subunit 2/4 Length=358 Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 122/303 (40%), Positives = 180/303 (59%), Gaps = 11/303 (3%) Query 17 SSSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEG-NM 75 SSS S SSS SS W+EKYRP+ +DEV +EV+ L+ +LEG ++ Sbjct 8 SSSQSVKAQKPSSSSSSGGEKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKK-SLEGADL 66 Query 76 PHLLLAGPPGTGKTSSVLCLARALL-QSRWRSCCLELNASDERSIDVVRDRIKAFAK--E 132 P+LL GPPGTGKTS++L AR L +R LELNASDER I VVR+++K FA+ Sbjct 67 PNLLFYGPPGTGKTSTILAAARELYGPDLYRQRVLELNASDERGIQVVREKVKRFAQLTV 126 Query 133 RRDLPLGR----HKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQ 188 P G+ KIIILDE DSMT AAQ ALRR ME S TTRF L CN S +IEPL Sbjct 127 AGTRPDGKTCPPFKIIILDEADSMTSAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLT 186 Query 189 SRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQS--TV 246 SRC+ RF L++ +R+ E+C KEN+ +T +G++A+V ++GD+R A+ LQS + Sbjct 187 SRCSKFRFKPLANDVQQERILEICRKENLKYTTEGVDALVRVSEGDLRKAITFLQSGARL 246 Query 247 SGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFR 306 + + ++ + ++ PP++++ ++ C G + + + ++ GY +++ Sbjct 247 NSEREITEQTIIEIAGVVPPKVIQSLLHICYKGTFEKLEVAVKDMIDQGYAATNLLNQLH 306 Query 307 GVL 309 V+ Sbjct 307 DVI 309 > tpv:TP04_0380 replication factor C subunit 3; K10756 replication factor C subunit 3/5 Length=347 Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 100/211 (47%), Positives = 135/211 (63%), Gaps = 9/211 (4%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP+ L +++ +++++ L I A +G +PHLL GPPG+GKTS++L ++R L S+ Sbjct 9 WVEKYRPETLQDIISHEDIMSTLMIFAEKGQLPHLLFHGPPGSGKTSTILAISRYLYGSQ 68 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAKERR---------DLPLGRHKIIILDEVDSMTE 154 LELNASDER ID VRD+IKAF++ D P K+IILDE D MT Sbjct 69 RNGFVLELNASDERGIDTVRDQIKAFSETSNTFTSTMPVDDPPRTNLKLIILDEADQMTN 128 Query 155 AAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAK 214 AAQ ALRRIME++S+ RF L CN + +I P+QSRC RF L + +R+RE+ Sbjct 129 AAQNALRRIMEIYSNNVRFCLICNFMNKIIPPIQSRCTGFRFQPLKSDVVRERIREIAKL 188 Query 215 ENVTFTDDGIEAIVFSADGDMRSALNNLQST 245 ENV TD ++A+V GDMR LN LQ T Sbjct 189 ENVKITDCALDALVEIGQGDMRRVLNCLQVT 219 > mmu:106344 Rfc4, A1, AI894123, AU040575, RFC37; replication factor C (activator 1) 4; K10755 replication factor C subunit 2/4 Length=364 Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 170/287 (59%), Gaps = 11/287 (3%) Query 26 SSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEG-NMPHLLLAGPP 84 + +++GSS + W+EKYRP+ +DEV DEV+ LR +LEG ++P+LL GPP Sbjct 22 TPATAGSSGETKKVKPVPWVEKYRPKCVDEVAFQDEVVAVLRK-SLEGADLPNLLFYGPP 80 Query 85 GTGKTSSVLCLARALLQSR-WRSCCLELNASDERSIDVVRDRIKAFAK-----ERRD-LP 137 GTGKTS++L AR L +R LELNASDER I VVR+++K FA+ R D P Sbjct 81 GTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKP 140 Query 138 LGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFT 197 KI+ILDE DSMT AAQ ALRR ME S TTRF L CN S +IEPL SRC+ RF Sbjct 141 CPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFK 200 Query 198 KLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQST--VSGFGLVNKE 255 LSD +RL ++ KENV ++ I +V ++GD+R A+ LQS ++G V+++ Sbjct 201 PLSDKIQQERLLDIAEKENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSED 260 Query 256 NVEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVV 302 + + P + I C +G + ++V + ++ G+ +V Sbjct 261 VITDIAGVIPAATIDGIFTACHSGSFDKLEAVVKNLIDEGHAATQLV 307 > tgo:TGME49_013000 activator 1 36 kDa, putative (EC:2.7.7.7); K10756 replication factor C subunit 3/5 Length=398 Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 122/374 (32%), Positives = 196/374 (52%), Gaps = 38/374 (10%) Query 15 GSSSSSSSSGSSSSSSGSSSSSSSGNESI-WIEKYRPQALDEVVGNDEVLQRLRIIALEG 73 SSS + G + + S S+ + ++ W+EKYRP+ L +V+ +D++++ +R +G Sbjct 7 ASSSEPKNLGKAPEKASSQLPSAHADRALPWVEKYRPERLSDVLAHDDIIRTIRNYVHKG 66 Query 74 NMPHLLLAGPPGTGKTSSVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAK-- 131 +PHLL GPPGTGKTS++L +A+ S R+ LELNASD+R I+ VR++IK FA+ Sbjct 67 QLPHLLFHGPPGTGKTSTILAVAKEFYGSAVRTHVLELNASDDRGINTVREQIKTFAETS 126 Query 132 ----ERRDLPLGRH--------------------------KIIILDEVDSMTEAAQQALR 161 ++ L G+ K+IILDE D MT AAQ ALR Sbjct 127 STSFQQNRLIFGKSAVPATEAAEATSSHGQEKKGQGGPSLKLIILDEADQMTNAAQNALR 186 Query 162 RIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTD 221 RIME ++ RF L CN + + +QSRC RFT +S A L + ++ E + +D Sbjct 187 RIMEAYARNVRFCLICNFVNKITPAIQSRCTGFRFTPVSSASLKTKAAQIVQDEKMKLSD 246 Query 222 DGIEAIVFSADGDMRSALNNLQ-STVSGFG-LVNKENVEKVCDTPPPEMLRRIMQQCVAG 279 DG++A+V A GDMR LN +Q S ++ G VN + V + PPP + + ++ + Sbjct 247 DGLDALVKIARGDMRRLLNCMQASHLAHPGEEVNADIVHRTLGLPPPSEVTTMFERLLVA 306 Query 280 DWYG-AQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGG 338 D++ + + ++ + GY D V F + D ++L+ F+ + +A G Sbjct 307 DFFACCKELDELVTAKGYAMRDWVIAFHERILLVD--WPANVLITFVSRLADLEERLATG 364 Query 339 LSTELQMEKMLAQL 352 S +QM ++A Sbjct 365 ASEAVQMHAVVAAF 378 > cpv:cgd8_2940 replication factor C like AAA ATpase ; K10755 replication factor C subunit 2/4 Length=335 Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 107/254 (42%), Positives = 157/254 (61%), Gaps = 13/254 (5%) Query 36 SSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCL 95 SS+ + ++W+EKYRP + ++ + +V+ L + GNMPHLL GPPGTGKTS+VL L Sbjct 1 SSTMSSNLWVEKYRPGNVLDISHHKDVVSMLSHVLKNGNMPHLLFHGPPGTGKTSAVLAL 60 Query 96 ARALL-QSRWRSCCLELNASDERSIDVVRDRIKAFAK---------ERRDLPLGRHKIII 145 +R L + +++ LELNASDER I VVRD+IK++ + E L KI+I Sbjct 61 SRELFGPNEYKNRILELNASDERGISVVRDKIKSWTRQVVQCNKTHEITGNLLPSWKIVI 120 Query 146 LDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLV 205 LDE + MT AQ ALRRI+E+ S TRF + CN S +IEPL SRCA RF +S + Sbjct 121 LDEAEMMTADAQSALRRIIEVSSKNTRFVIICNYISKIIEPLASRCAKFRFQPISANSQI 180 Query 206 QRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCD--- 262 +RL+ +C++E+V++ D +E IV + GD+R +N LQS FG + ++ + D Sbjct 181 ERLKYICSQEDVSYEDGVLETIVNLSQGDLRRGINILQSASELFGKDKRISMSSILDVSG 240 Query 263 TPPPEMLRRIMQQC 276 PP +++ RI+ C Sbjct 241 VPPIKIIERIINSC 254 > sce:YNL290W RFC3; Rfc3p; K10756 replication factor C subunit 3/5 Length=340 Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 114/308 (37%), Positives = 174/308 (56%), Gaps = 15/308 (4%) Query 32 SSSSSSSGNESI-WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTS 90 S+S+ E++ W+EKYRP+ LDEV G +EV+ +R EG +PHLL GPPGTGKTS Sbjct 2 STSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTS 61 Query 91 SVLCLARALLQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVD 150 +++ LAR + + + LELNASD+R IDVVR++IK FA R+ G K+IILDE D Sbjct 62 TIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-FKLIILDEAD 120 Query 151 SMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLRE 210 +MT AAQ ALRR++E ++ TRF + N + + L SRC RF L + +R+ Sbjct 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN 180 Query 211 VCAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVE-----KVCDTPP 265 V E + + + +A++ ++GDMR LN LQS + +++ + + C P Sbjct 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 Query 266 PEMLRRIMQQCVAGDWYGAQ-SVARVILSLGYTPLDVVTTFRGVLRRADSELQE-----H 319 P L+ +++ + DW A ++ +V + G +D++ +L D ELQ H Sbjct 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILE--DYELQNEETRVH 298 Query 320 LLLEFLGI 327 LL + I Sbjct 299 LLTKLADI 306 > ath:AT1G77470 replication factor C 36 kDA, putative; K10756 replication factor C subunit 3/5 Length=369 Score = 197 bits (501), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/204 (48%), Positives = 139/204 (68%), Gaps = 3/204 (1%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRPQ+LD+V + +++ + + E +PHLLL GPPGTGKTS++L +AR L + Sbjct 41 WVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPK 100 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRH--KIIILDEVDSMTEAAQQALR 161 +R+ LELNASD+R IDVVR +I+ FA + LG+ K+++LDE D+MT+ AQ ALR Sbjct 101 YRNMILELNASDDRGIDVVRQQIQDFAST-QSFSLGKSSVKLVLLDEADAMTKDAQFALR 159 Query 162 RIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTD 221 R++E ++ +TRFAL N + +I LQSRC RF L H+ QRL+ V E + +D Sbjct 160 RVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSD 219 Query 222 DGIEAIVFSADGDMRSALNNLQST 245 G+ A+V ++GDMR ALN LQST Sbjct 220 CGLAALVRLSNGDMRKALNILQST 243 > ath:AT1G21690 emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nucleotide binding; K10755 replication factor C subunit 2/4 Length=339 Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 110/311 (35%), Positives = 165/311 (53%), Gaps = 9/311 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP+ + +V +EV++ L + PH+L GPPGTGKT++ L +A L Sbjct 11 WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70 Query 104 -WRSCCLELNASDERSIDVVRDRIKAFA-------KERRDLPLGRHKIIILDEVDSMTEA 155 ++S LELNASD+R I+VVR +IK FA + P KIIILDE DSMTE Sbjct 71 LYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTED 130 Query 156 AQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKE 215 AQ ALRR ME +S TRF CN S +IEPL SRCA RF LS+ + R+ +C +E Sbjct 131 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 190 Query 216 NVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFG-LVNKENVEKVCDTPPPEMLRRIMQ 274 ++ + + + + GD+R A+ LQS FG + ++ V P E++ ++ Sbjct 191 GLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFT 250 Query 275 QCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVLRRADSELQEHLLLEFLGIVGMTHMT 334 C +GD+ A I++ GY ++ ++ ADS++ + + + T Sbjct 251 ACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDKR 310 Query 335 MAGGLSTELQM 345 + G LQ+ Sbjct 311 LVDGADEYLQL 321 > cel:F44B9.8 ARPA; hypothetical protein; K10756 replication factor C subunit 3/5 Length=368 Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 111/344 (32%), Positives = 182/344 (52%), Gaps = 18/344 (5%) Query 15 GSSSSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGN 74 GS + S S + + ++++ + W+EKYRP LDE+V ++++++ L Sbjct 2 GSRTGSREEHSLQFLNLTKMTTTTASNLPWVEKYRPSKLDELVAHEQIVKTLTKFIENRT 61 Query 75 MPHLLLAGPPGTGKTSSVLCLARALLQ-SRWRSCCLELNASDERSIDVVRDRIKAFAKER 133 +PHLL GPPGTGKT++VL AR + ++ S LELNASDER IDVVR+ I FA+ + Sbjct 62 LPHLLFYGPPGTGKTTTVLAAARQMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTK 121 Query 134 R-----------DLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSS 182 +P K++ILDE D+MT+ AQ ALRR++E ++D RF + CN +S Sbjct 122 GLQAFSTSSNTGTVPF---KLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLAS 178 Query 183 VIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNL 242 ++ +QSRC RF L +V RL + E + T DG +A++ + GDMR+ +N L Sbjct 179 IVPAIQSRCTRFRFAPLDQKLIVPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTL 238 Query 243 QSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYGA-QSVARVILSLGYTPLDV 301 QST F V++ V + P P+ ++ +++ + ++ + GY DV Sbjct 239 QSTAMSFDTVSENTVYQCIGQPTPKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDV 298 Query 302 VTTFRGVLRRADSELQEHLLLEFLGIVGMTHMTMAGGLSTELQM 345 +T + D + + + + +G ++ G S E Q+ Sbjct 299 ITHLHDFVFTLD--IPDEAMSAIITGLGEVEENLSTGCSNETQL 340 > sce:YJR068W RFC2; Rfc2p; K10755 replication factor C subunit 2/4 Length=353 Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 108/275 (39%), Positives = 154/275 (56%), Gaps = 16/275 (5%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALL-QS 102 W+EKYRP+ LDEV D + L+ N+PH+L GPPGTGKTS++L L + L Sbjct 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAK------ERRDL---PLGRHKIIILDEVDSMT 153 +S LELNASDER I +VR+++K FA+ + DL P +KIIILDE DSMT Sbjct 87 LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT 146 Query 154 EAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCA 213 AQ ALRR ME +S TRF L CN + +I+PL SRC+ RF L ++ + RLR + Sbjct 147 ADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISE 206 Query 214 KENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGL------VNKENVEKVCDTPPPE 267 +ENV D +E I+ + GD+R + LQS G + VE++ P + Sbjct 207 QENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHD 266 Query 268 MLRRIMQQCVAGDWYGAQSVARVILSLGYTPLDVV 302 +L I+++ +GD+ + + G++ VV Sbjct 267 ILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVV 301 > bbo:BBOV_III002960 17.m07281; hypothetical protein; K10755 replication factor C subunit 2/4 Length=336 Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 105/275 (38%), Positives = 153/275 (55%), Gaps = 14/275 (5%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP +LD++V + + +R I +MPH++ GPPGTGKTS+ L +AR + Sbjct 7 WVEKYRPASLDDIVFHTNAMTTMRHIVESYDMPHMIFHGPPGTGKTSAALAIARQIYGPE 66 Query 104 -WRSCCLELNASDERSIDVVRDRIKAFAK-----ERRDLPLGR----HKIIILDEVDSMT 153 + LELNASDER I+VVR+RIK + + R + GR K+IILDE D +T Sbjct 67 GMKERVLELNASDERGINVVRERIKTYTRLNISSNRVNTQTGRVMPNFKMIILDEADMIT 126 Query 154 EAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCA 213 AQ ALRRI+E S+ +RF L CN +I P+ SRC+ F +S ++RLR +C Sbjct 127 PDAQAALRRIIENFSNISRFILICNYVHKIIGPIYSRCSAFHFKPISQDAQIERLRYICT 186 Query 214 KENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIM 273 E++ + D ++ + + GDMR ++ LQST S F V +E V V PP E++ I Sbjct 187 AESLEYEDHALDFLTQVSQGDMRRSVTILQSTASLFNKVTEEAVRNVSGYPPKEIVNEIF 246 Query 274 QQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGV 308 C Q V + + Y +V T F+ + Sbjct 247 ATCKG----TTQDVEELCKKIIYDGWEVATLFQQI 277 > pfa:PF14_0601 replication factor C3; K10756 replication factor C subunit 3/5 Length=344 Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 154/265 (58%), Gaps = 6/265 (2%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP L++++ +++V+ ++ +G +PHLLL GPPGTGKTS++L + + L + Sbjct 15 WVEKYRPNVLNDIISHEQVISTIKRFVQKGELPHLLLHGPPGTGKTSTILAVCKELYGDK 74 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAKERRDLPLGRH---KIIILDEVDSMTEAAQQAL 160 S LELNASD+R I+V+RD+IK FA+ + K+IILDE D MT AQ A+ Sbjct 75 RSSFVLELNASDDRGINVIRDQIKTFAESKNHYTTCEKTTLKLIILDEADHMTYPAQNAM 134 Query 161 RRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFT 220 RRIME ++ RF L CN + + +QSRC RF L ++ + ++ ENV T Sbjct 135 RRIMENYAKNVRFCLLCNYVNKITPAIQSRCTAFRFAPLKKEYMKNKALDIAKSENVNLT 194 Query 221 DDGIEAIVFSADGDMRSALNNLQ-STVSGFGLVNKENV-EKVCDTPPPEMLRRIMQQCVA 278 + GI++++ GDMR LN LQ ++S LV ENV D P P ++I++ Sbjct 195 EGGIDSLIRVGHGDMRRILNCLQVVSLSHKNLVIDENVILSTLDIPLPSETKKILEYFTK 254 Query 279 GDWYGA-QSVARVILSLGYTPLDVV 302 G + + V+ + GY+ D++ Sbjct 255 GSIKESYEFVSNLQYDKGYSTKDIM 279 > bbo:BBOV_II002510 18.m06203; replication factor C3 protein; K10756 replication factor C subunit 3/5 Length=348 Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 115/336 (34%), Positives = 182/336 (54%), Gaps = 34/336 (10%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP++ +++ +D++L L A +G +PHLL GPPGTGKTS+++ ++R L S Sbjct 9 WVEKYRPESFSDIISHDDILSTLMNFAEKGQLPHLLFHGPPGTGKTSTIMAVSRYLYGSH 68 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAKERRDL----------PLGRHKIIILDEVDSMT 153 S +ELNASDER I+ VR++IK FA+ P K+IILDE D MT Sbjct 69 RHSYVMELNASDERGIETVREQIKTFAETSNTFSSGIVGSDSGPRTNLKLIILDEADQMT 128 Query 154 EAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCA 213 AAQ +LRRIME++S RF L CN + +I P+QSRC RF L + + +R ++ Sbjct 129 NAAQNSLRRIMEIYSSNVRFCLICNFMNRIIPPIQSRCTGFRFPPLKNDVVKRRTADIAK 188 Query 214 KENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFG-----LVNKENVEKVCDTPPP-- 266 E +T ++ ++ + GDMR LN LQ T G ++ + V P P Sbjct 189 AEGLTVSECALDTLAEIGQGDMRRVLNCLQVTAMSIGATRDKVITSDVVISTAGLPNPTE 248 Query 267 --EMLRRIMQQ----CVAGDWYGAQSVARVILSLGYTPLDVVTT-FRGVLRRADSELQEH 319 ++L+R+MQ+ CV D+ V + GY+ D+VT +R +LR + Sbjct 249 ISKLLQRLMQESFKDCV--DY-----VVTLNQVQGYSVEDLVTALYRSILR---IDWPNV 298 Query 320 LLLEFLGIVGMTHMTMAGGLSTELQMEKMLAQLCKV 355 ++++ L +G ++ G S +Q+ +++ +V Sbjct 299 VIVQLLIRLGDIEQRLSAGASPYIQIASLVSAFAEV 334 > tpv:TP01_0978 replication factor C subunit 2; K10755 replication factor C subunit 2/4 Length=335 Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 139/245 (56%), Gaps = 14/245 (5%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQ-S 102 W+EKYRP+ + +V+ + + + I NMPH++ GPPGTGKTS+ L +AR + Sbjct 9 WVEKYRPKKISDVIFQTQAVSIMEQIVETFNMPHMIFHGPPGTGKTSAALAMARQIYGLE 68 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAK-----------ERRDLPLGRHKIIILDEVDS 151 R LELNASDER IDVVRDRIK + + R +P +K+IILDE D Sbjct 69 GMRERVLELNASDERGIDVVRDRIKTYTRINISNNRVNPETNRVMP--NYKMIILDEADM 126 Query 152 MTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREV 211 +T AQ ALRR++E +S +RF L CN +I P+ SRC++ F + V RL+ + Sbjct 127 ITADAQAALRRVIENYSSISRFVLICNYLHKIIGPIYSRCSVFHFKPIETNSQVDRLKYI 186 Query 212 CAKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRR 271 C +E +TF +E + + GDMR ++ LQST + + + + V PP E++ R Sbjct 187 CNQEGITFDQKALEFLTTVSSGDMRKSITILQSTACLYNEITENAINSVSGKPPKEVVER 246 Query 272 IMQQC 276 I + C Sbjct 247 IFEVC 251 > tgo:TGME49_037110 replication factor C small subunit, putative (EC:2.7.7.7); K10755 replication factor C subunit 2/4 Length=357 Score = 183 bits (464), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 159/288 (55%), Gaps = 15/288 (5%) Query 17 SSSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMP 76 S+SS S S+ + SS W+EKYRP+ ++++ E + LR I GNMP Sbjct 6 SASSVEKAPSPFSTAAPPRVSSAQVVPWVEKYRPRRVEDMAHQVEPKKMLRRILETGNMP 65 Query 77 HLLLAGPPGTGKTSSVLCLARALL-QSRWRSCCLELNASDERSIDVVRDRIKAFAKER-- 133 HLL GPPGTGKTS+ L L R L + ++ LELNASD+R I VVR+RIK + K Sbjct 66 HLLFYGPPGTGKTSAALALVRELFGREEAKNRLLELNASDDRGIKVVRERIKQYTKTNIA 125 Query 134 ---------RDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVI 184 R++P KI+ILDE D MT+ AQ ALRRIME S TTRF + CN +I Sbjct 126 KGKINPETGREMPTW--KIVILDEADMMTQDAQSALRRIMEAFSRTTRFIIICNYVHRII 183 Query 185 EPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQS 244 +P+ SRC+ RF ++ R+R +C E + T ++A++ + GD+R A+ LQS Sbjct 184 DPIFSRCSPHRFEPVARDAQEARIRHICDSEGLVVTSGAVDALLRISQGDLRRAVTLLQS 243 Query 245 TVSGF-GLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYGAQSVARVI 291 S + ++++ + +V PP ++ ++ C A + V VI Sbjct 244 AASIYDDNLHEDAILEVAGQPPARIVTDFLRACQASPSQASSEVDNVI 291 > pfa:PFB0840w replication factor C, subunit 2; K10755 replication factor C subunit 2/4 Length=330 Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 159/295 (53%), Gaps = 15/295 (5%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALL-QS 102 W+EKYRP+ LD++V + + L+ + NMPHL+ GPPGTGKTS++ LA L + Sbjct 6 WVEKYRPKRLDDIVHQNNAVMMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHELFGKE 65 Query 103 RWRSCCLELNASDERSIDVVRDRIKAFAK----------ERRDLPLGRHKIIILDEVDSM 152 LELNASD+R I+VVR++IKA+ + E +++ L K+++LDE D M Sbjct 66 NISERVLELNASDDRGINVVREKIKAYTRISISKNKIHSETKEV-LPSWKLVVLDEADMM 124 Query 153 TEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVC 212 TE AQ ALRRI+E++S+ TRF L CN + +P+ SRC+ RF + ++L +C Sbjct 125 TEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIFSRCSCYRFQSIPINIKKEKLLYIC 184 Query 213 AKENVTFTDDGIEAIVFSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRI 272 EN+ DD +E I+ + +GD+R A++ LQ + +V V P ++ +I Sbjct 185 QNENIDIVDDALEKIIETTEGDLRRAVSILQLCSCINTKITLNSVLDVSGLPSDNIVYKI 244 Query 273 MQQCVAGDWYGAQSVARVILSLGYTPLDVVTTFRGVL---RRADSELQEHLLLEF 324 + C D + + I+ G+ + +F + L+ +LLE Sbjct 245 IDACKMKDLKLVEKTVQDIIEDGFDVAYIFKSFNNYFVTNTEYEDSLKYQILLEL 299 > cel:F31E3.3 rfc-4; RFC (DNA replication factor) family member (rfc-4); K10755 replication factor C subunit 2/4 Length=334 Score = 177 bits (448), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 11/209 (5%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEG-NMPHLLLAGPPGTGKTSSVLCLARALL-Q 101 W EKYRP+ LD++ DEV+ L+ AL+G ++PHLL GPPGTGKTS+ L R L + Sbjct 17 WTEKYRPKTLDDIAYQDEVVTMLKG-ALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPK 75 Query 102 SRWRSCCLELNASDERSIDVVRDRIKAFAK------ERRDLPLGRHKIIILDEVDSMTEA 155 + + L+LNASDER I VVR +I++F+K R D+ + KIIILDEVD+MT Sbjct 76 NIFHDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHREDVL--KLKIIILDEVDAMTRE 133 Query 156 AQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKE 215 AQ A+RR++E S TTRF L CN S +I P+ SRCA RF L VQRLR +C E Sbjct 134 AQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQVQRLRTICDAE 193 Query 216 NVTFTDDGIEAIVFSADGDMRSALNNLQS 244 +DD ++ ++ ++GD+R A+ LQS Sbjct 194 GTPMSDDELKQVMEYSEGDLRRAVCTLQS 222 > cpv:cgd3_3170 replication factor RFC3 AAA+ ATpase ; K10756 replication factor C subunit 3/5 Length=383 Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 144/269 (53%), Gaps = 39/269 (14%) Query 44 WIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQSR 103 W+EKYRP L +++ + +++ + G +PHLL GPPGTGKTS++ +++ + + R Sbjct 14 WVEKYRPSGLQDLLSHKDIINTIEKFISSGQLPHLLFHGPPGTGKTSTIHAISKCIYKDR 73 Query 104 WRSCCLELNASDERSIDVVRDRIKAFAK------------------------ERRDLPLG 139 LELNASD+R I+VVRD IK+F++ R+L Sbjct 74 KYQMVLELNASDDRGINVVRDAIKSFSESASTTLNHSGGTNSNIEDIEMSDVSTRNLDCN 133 Query 140 RH-----KIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAIL 194 + K+IILDE D MT AQ ALRRIME +S+ RF + CN + + LQSRC Sbjct 134 KSLCENIKLIILDEADMMTSTAQMALRRIMERYSEHVRFCIICNYVNKITPALQSRCTRF 193 Query 195 RFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQS-TVSGFGLVN 253 RF+ L + R+ E+ E + T +G E+++ S+ GDMR LN LQS ++S +G + Sbjct 194 RFSPLPIEDIRNRISEIALSERIFITREGQESLIKSSRGDMRKVLNVLQSCSMSNYGNIE 253 Query 254 KE---------NVEKVCDTPPPEMLRRIM 273 K ++E + EM+ RI+ Sbjct 254 KHKDSGELNGASIEGLITYINEEMIHRIL 282 > hsa:5985 RFC5, MGC1155, RFC36; replication factor C (activator 1) 5, 36.5kDa; K10756 replication factor C subunit 3/5 Length=255 Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 8/245 (3%) Query 109 LELNASDERSIDVVRDRIKAFAKERRDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHS 168 LELNASD+R ID++R I +FA R G K++ILDE D+MT+ AQ ALRR++E + Sbjct 3 LELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFT 61 Query 169 DTTRFALACNSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIV 228 + TRF L CN S +I LQSRC RF L+ +V RL V +E V ++DG++A+V Sbjct 62 ENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALV 121 Query 229 FSADGDMRSALNNLQSTVSGFGLVNKENVEKVCDTPPPEMLRRIMQQCVAGDWYGA-QSV 287 + GDMR ALN LQST FG V +E V P + I+ + D+ A +++ Sbjct 122 TLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRNI 181 Query 288 ARVILSLGYTPLDVVTTFRGVLRRAD--SELQEHLLLEFLGIVGMTHMTMAGGLSTELQM 345 + G D++T + R D S ++ HLL + I ++ G + ++Q+ Sbjct 182 TELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADI----EYRLSVGTNEKIQL 237 Query 346 EKMLA 350 ++A Sbjct 238 SSLIA 242 > ath:AT5G27740 EMB2775 (EMBRYO DEFECTIVE 2775); DNA binding / nucleoside-triphosphatase/ nucleotide binding; K10756 replication factor C subunit 3/5 Length=354 Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 126/233 (54%), Gaps = 31/233 (13%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL--- 99 +W++KYRP++LD+V+ ++++ Q+L+ + E + PHLL GP G+GK + ++ L + + Sbjct 2 LWVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGA 61 Query 100 ------LQSR-WR-----------------SCCLELNASDERSID--VVRDRIKAFAKER 133 +++R W+ + +EL SD D +V++ IK AK R Sbjct 62 SAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNR 121 Query 134 RDLPLGR--HKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRC 191 G+ +K+++L+EVD ++ AQ +LRR ME +S + R L CNSSS V E ++SRC Sbjct 122 PIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRC 181 Query 192 AILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQS 244 +R S +V+ L V KE++ I ++ +R A+ +L++ Sbjct 182 LNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLET 234 > xla:734626 rfc3, MGC115007; replication factor C (activator 1) 3, 38kDa; K10756 replication factor C subunit 3/5 Length=356 Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 114/234 (48%), Gaps = 44/234 (18%) Query 42 SIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL-- 99 S+W++KYRP +L ++ + + +LR + G+ PHLL+ GP G GK + ++CL R L Sbjct 2 SLWVDKYRPSSLSKLDYHKDQASQLRNLVQCGDFPHLLVFGPSGAGKKTRIMCLLRELYG 61 Query 100 -------------------------LQSRWRSCCLELNASDERSID--VVRDRIKAFAKE 132 + S + LE+N SD + D V+++ +K A+ Sbjct 62 AGVEKLRIEHQTITTPSKKKIEISTIASNYH---LEVNPSDAGNSDRVVIQELLKTVAQS 118 Query 133 R-------RDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIE 185 + RD K+++L EVD +T+ AQ ALRR ME + T R L CNS+S VI Sbjct 119 QQLETSTQRDF-----KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIA 173 Query 186 PLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 P++SRC +R S + L VC KE + D I + ++R AL Sbjct 174 PIRSRCLAVRVPAPSTDEICTVLFSVCKKEGLVLPQDLARRIAEKSGRNLRKAL 227 > cel:C39E9.13 rfc-3; RFC (DNA replication factor) family member (rfc-3); K10756 replication factor C subunit 3/5 Length=354 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 32/229 (13%) Query 42 SIWIEKYRPQAL---DEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARA 98 ++W++KYRP+ L D V + E L+ ++ + MPHLL GP G GK + + CL R Sbjct 2 ALWVDKYRPKDLLGKDGVDYHIEQANHLKFLSADC-MPHLLFCGPSGAGKKTRIKCLLRE 60 Query 99 L------------------------LQSRWRSCCLELNASDERSID--VVRDRIKAFAKE 132 L +Q+ + +E+ SD D VV+D +K A+ Sbjct 61 LYGVGVEKTQLIMKSFTSPSNKKLEIQTVSSNYHIEMTPSDVGIYDRVVVQDLVKEMAQT 120 Query 133 RRDLPLGRH--KIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSR 190 + + K+++L E DS+T AQ LRR ME +++ + L+C S S +IEPLQSR Sbjct 121 SQIESTSQRSFKVVVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSR 180 Query 191 CAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 C I+ +D + + LR+V +E+ ++ ++ IV ++G++R A+ Sbjct 181 CIIINVPAPTDEDVTKVLRKVIERESFLLPENVLQKIVEKSEGNLRRAI 229 > hsa:5983 RFC3, MGC5276, RFC38; replication factor C (activator 1) 3, 38kDa; K10756 replication factor C subunit 3/5 Length=356 Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 44/234 (18%) Query 42 SIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL-- 99 S+W++KYRP +L + + E +LR + G+ PHLL+ GP G GK + ++C+ R L Sbjct 2 SLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYG 61 Query 100 -------------------------LQSRWRSCCLELNASDERSID--VVRDRIKAFAKE 132 + S + LE+N SD + D V+++ +K A+ Sbjct 62 VGVEKLRIEHQTITTPSKKKIEISTIASNYH---LEVNPSDAGNSDRVVIQEMLKTVAQS 118 Query 133 R-------RDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIE 185 + RD K+++L EVD +T+ AQ ALRR ME + T R L CNS+S VI Sbjct 119 QQLETNSQRDF-----KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIP 173 Query 186 PLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 P++SRC +R S + L VC KE + + + ++R AL Sbjct 174 PIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227 > mmu:69263 Rfc3, 2810416I22Rik, 38kDa, AU022547, Recc3; replication factor C (activator 1) 3; K10756 replication factor C subunit 3/5 Length=356 Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 44/234 (18%) Query 42 SIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL-- 99 S+W++KYRP +L + + E +LR + G+ PHLL+ GP G GK + ++C+ R L Sbjct 2 SLWVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYG 61 Query 100 -------------------------LQSRWRSCCLELNASDERSID--VVRDRIKAFAKE 132 + S + LE+N SD + D V+++ +K A+ Sbjct 62 IGVEKLRIEHQTITTPSKKKIEISTIASNYH---LEVNPSDAGNSDRVVIQEMLKTVAQS 118 Query 133 R-------RDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIE 185 + RD K+++L EVD +T+ AQ ALRR ME + T R L CNS+S VI Sbjct 119 QQLETSSQRDF-----KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIP 173 Query 186 PLQSRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 P++SRC +R S + L VC KE + + + ++R AL Sbjct 174 PIRSRCLAVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKAL 227 > dre:259256 rfc3, cb275; replication factor C (activator 1) 3; K10756 replication factor C subunit 3/5 Length=356 Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 28/226 (12%) Query 42 SIWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL-- 99 S+W++KYRP +L ++ + E +L+ + G+ PHLL+ GP G GK + ++CL R L Sbjct 2 SLWVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELYG 61 Query 100 -----LQSRWRSCC-----------------LELNASDERSID--VVRDRIKAFAKERRD 135 L+ +S LE+N SD + D V+++ IK A+ ++ Sbjct 62 AGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQI 121 Query 136 LPLG--RHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCAI 193 K+++L EVD +T+ AQ ALRR ME + T R L CNS+S VI P++SRC Sbjct 122 QSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLA 181 Query 194 LRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 +R S + L VC KE + + + I + ++R AL Sbjct 182 VRVPLPSVEEVCSVLSGVCRKEGLLLPPELAKQIAEKSGRNLRKAL 227 > sce:YBR087W RFC5; Rfc5p; K10756 replication factor C subunit 3/5 Length=354 Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 127/238 (53%), Gaps = 35/238 (14%) Query 42 SIWIEKYRPQALDEVVGNDEVLQRLRIIALEG-NMPHLLLAGPPGTGKTSSVLCL----- 95 S+W++KYRP++L+ + N+E+ L+ ++ + ++PHLLL GP GTGK + + L Sbjct 2 SLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIF 61 Query 96 ----------ARALLQSRWRSC---------CLELNASDERSID--VVRDRIKAFAK--- 131 R + + R LE+ SD + D V+++ +K A+ Sbjct 62 GPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ 121 Query 132 ----ERRDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPL 187 + +D R+K +I++E +S+T+ AQ ALRR ME +S R + C+S S +I P+ Sbjct 122 VDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPI 181 Query 188 QSRCAILRFTKLSDAHLVQRLREVCAKENVTF-TDDGIEAIVFSADGDMRSALNNLQS 244 +SRC ++R SD+ + L +V E + T D ++ I +++G++R +L L+S Sbjct 182 KSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES 239 > pfa:PF11_0117 replication factor C subunit 5, putative; K10756 replication factor C subunit 3/5 Length=349 Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 36/239 (15%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARALLQS 102 +W+EKY PQ++DE+ + ++ +RLR ++ ++PH++ G PG GK++ + CL + + + Sbjct 1 MWLEKYSPQSIDELTIHKDITERLRKLSRHKDLPHIIFYGAPGGGKSTRINCLIKEIFKD 60 Query 103 RW---RSCCLELNASDERSIDVV---------------RDRI------------KAFAKE 132 R C+ NA ++ +I+VV +D+I K+ A Sbjct 61 EKIIRRPECIT-NAENKININVVQSNYHLELQCFELGNKDKIIVQSIIKELCSYKSSASF 119 Query 133 RRDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCA 192 P+ R I + + + ++E AQ LRR +E + R L S +IEPL+SRC Sbjct 120 FSKTPMYR--IFVFKDAEFLSEGAQAGLRRTLETYIRNARVILHLEHLSKIIEPLKSRCI 177 Query 193 ILRFTKLSDAHLVQRLREVCAKENV--TF-TDDGIEAIVFSADGDMRSALNNLQSTVSG 248 +R S+ + L+ +C +ENV +F T + + ++ + ++R + L+ +V Sbjct 178 CIRVPLPSEEEIYSVLQNICKQENVSPSFSTYEYFQTLINTHGRNLRKCIMALEMSVYA 236 > cpv:cgd8_610 DNA replication repC1, AAA+ ATpase with a BRCT domain at the N-terminus ; K10754 replication factor C subunit 1 Length=874 Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 60/289 (20%) Query 6 ASNSSSAMNGSSSSSSSSGSSSSSSGSSSSSSSGNESIWIEKYRPQALDEVVGNDEVLQR 65 A S + N S SG+ + ++S+ GN S+W ++++P++LD+V+GN EV+++ Sbjct 236 AKYDSQSPNRKSHGVFESGNKINEGNMNNSNFDGNSSLWTDRHKPESLDQVLGNGEVIKK 295 Query 66 LRI-------IALEGN--------------MPHL--------LLAGPPGTGKTSSVLCLA 96 L+ + +EG P + LL+GPPG GK++ +A Sbjct 296 LQTWLSDWKSVVIEGKKKAPPKASFSPGSRFPQVENINARAALLSGPPGIGKSTVATLIA 355 Query 97 RALLQSRWRSCCLELNASDERSIDVVRD---------RIKAFAKER-------RDLPLGR 140 + + +E+NASD+R+ +V+ + + FA++ + L Sbjct 356 K-----KCGYIPIEMNASDDRTKEVIENLSESAVGGFSLSTFARKSSSSSQFGEEGGLNT 410 Query 141 HKIIILDEVDSM---TEAAQQALRRIMELHSDTTRFALAC---NSSSSVIEPLQSRCAIL 194 + ++I+DE+D + AL R+++ TR+ + C + S + L +C L Sbjct 411 NMLLIMDEMDGLGGSDRGGAAALGRLIQ----KTRWPIICICNDRMSEKVRNLAPKCYDL 466 Query 195 RFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSALNNLQ 243 RF++ S +++R++E+ KE + + IE + S D+R LN LQ Sbjct 467 RFSRPSKVQIIKRMQEIANKEGMKIEPNAIELLCESVGNDLRQILNELQ 515 > cpv:cgd2_3180 replication factor C subunit 5 ; K10756 replication factor C subunit 3/5 Length=345 Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 39/231 (16%) Query 43 IWIEKYRPQALDEVVGNDEVLQRLRIIALE--GNMPHLLLAGPPGTGKTSSVLCLARALL 100 +WI+KY+P+ L ++ N E+ L I GN+PHLL GP G GK + + + Sbjct 2 LWIDKYQPRYLRDLKCNKELNSLLEKITSNSNGNIPHLLFYGPSGGGKKVRISSVLHEIF 61 Query 101 -----------------QSRWRSC----CLELNASDERSID--VVRDRIKAFAKERRDLP 137 S + C ++++A D + D V + IK + + Sbjct 62 GDSVDKVKADMIKPEGTNSEFVLCQSPHHMQISAPDLGTKDGIVTQYLIKQLSSQ----- 116 Query 138 LG---------RHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQ 188 +G +++ + E D ++ AQ LRR ME +S+ +R L C SS+I PL+ Sbjct 117 MGANSFFSKGPNYRVFTILEADVLSLKAQAGLRRTMEKYSNNSRLILHCEQLSSIIPPLR 176 Query 189 SRCAILRFTKLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSAL 239 SRC +R S ++Q LR + EN+ ++ +E IV ++ ++R A+ Sbjct 177 SRCLCIRVPLPSPEEVLQVLRFISNSENLQVPNNYLEQIVTESECNLRRAI 227 > pfa:PFB0895c replication factor C subunit 1, putative; K10754 replication factor C subunit 1 Length=904 Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 41/272 (15%) Query 6 ASNSSSAMNGSSSSSSSSGSSSSSSGSSSSSSSGNE---SIWIEKYRPQALDEVVGNDEV 62 AS++ N + + + + + ++ NE +W+EKYRP+ L+E+VGN++ Sbjct 312 ASDTIKTENKDKNYNYEKKDKNYNYEKKDTHNTQNEILNQLWVEKYRPKNLNELVGNNQN 371 Query 63 LQRLRI-------IALEG----------------NMPHLLLAGPPGTGKTSSVLCLARAL 99 + +L+ + ++G N LL+GP G GKT++ ++ A Sbjct 372 VIKLQNWLASWEDVCIKGIKKPAQKTFRGIFENVNARCALLSGPAGIGKTTTAKIVSEA- 430 Query 100 LQSRWRSCCLELNASDERSIDVVRDRIKAFAKERRD-LPLGRHKI----IILDEVDSMTE 154 S + +E NASDER+ V ++I A + L K+ II+DEVD M+ Sbjct 431 --SGYN--VIEFNASDERNKAAV-EKISEMATGGYSIMSLNNRKLTKTCIIMDEVDGMSS 485 Query 155 AAQQALRRIMELHSDTTRFALAC---NSSSSVIEPLQSRCAILRFTKLSDAHLVQRLREV 211 + I++L + T+ + C + ++ + L ++C L+F+ +V+RL E+ Sbjct 486 GDKGGSTAILKL-IEKTKCPIICICNDRQNNKMRTLANKCYDLKFSMPQKNSVVKRLLEI 544 Query 212 CAKENVTFTDDGIEAIVFSADGDMRSALNNLQ 243 C KE + + +E + S GD+R LN LQ Sbjct 545 CKKEGIMMEPNALELLWESTCGDIRQMLNTLQ 576 > ath:AT1G14460 DNA polymerase-related Length=1116 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 36/221 (16%) Query 46 EKYRPQALDEVVGNDEVLQRLRIIALEGNMPHL-LLAGPPGTGKTSSVLCLARAL----L 100 +KY+P DE++G V+Q L +G + H+ L GP GTGKTS+ L+ AL + Sbjct 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAALNCDVV 485 Query 101 QSRWRSC----------------CLELNASDERSIDVVRDRIKAFAKERRDLPLG----- 139 + C LEL+A + + VR +K L L Sbjct 486 TEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLKKL------LTLAPQSSQ 539 Query 140 RHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSS--SVIEPLQSRCAILRFT 197 R+K+ ++DE + +L + +E + +F C ++ +V +QSRC F Sbjct 540 RYKVFVIDECHLLPSRTWLSLLKFLE--NPLQKFVFVCITTDLDNVPRTIQSRCQKYIFN 597 Query 198 KLSDAHLVQRLREVCAKENVTFTDDGIEAIVFSADGDMRSA 238 K+ D +V RLR++ + EN+ ++ I +ADG +R A Sbjct 598 KVRDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDA 638 > bbo:BBOV_IV003080 21.m02902; replication factor C 38 kDa subunit; K10756 replication factor C subunit 3/5 Length=349 Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 42/259 (16%) Query 43 IWIEKYRPQALDEVVGNDEV---LQRLRIIALEGNMPHLLLAGPPGTGKTSSVLCLARAL 99 +WI+K+ P+ LDE+ + +V L +L + G +PHLL GP G+GK + +L RA+ Sbjct 2 LWIDKHCPKRLDELTSHRDVNALLTKL-VEKSHGEIPHLLFYGPSGSGKKTRILATLRAV 60 Query 100 L-----------------QSRWRSC---------CLELNASDERSI-DVVRDRIKAFAKE 132 S C C +L + D + D++R + + Sbjct 61 FGPSIDKVKTEIISNVDTSSEVVVCQSDHHIQIPCSDLGSRDRVIVQDIIRTLSASPSAS 120 Query 133 RRDLPLGRHKIIILDEVDSMTEAAQQALRRIMELHSDTTRFALACNSSSSVIEPLQSRCA 192 + ++ + ++ D+++ AQ ALRR ME + R L N S ++ PL+SRC Sbjct 121 NYFMKGPSFRVFLFEDADALSLPAQAALRRTMETYIKNARMILHVNQLSRIMLPLRSRCL 180 Query 193 ILRFTKLSDAHLVQRLREVCAKENVT---FTDDGIEAIVFSADGDMRSALNNLQSTVSG- 248 +R + + LR +C ENV +D+ + I S+ ++R A+ L++ G Sbjct 181 CIRVGSHTIDEITTILRSICKIENVASAQSSDEVLRRIATSSGRNLRRAILTLETMTMGG 240 Query 249 -------FGLVNKENVEKV 260 F L + NV+++ Sbjct 241 YPGNTVDFLLPWERNVQQI 259 Lambda K H 0.316 0.129 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 15893029844 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40