bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0241_orf1
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_070380 40S ribosomal protein S13, putative ; K02953... 221 5e-58
pfa:PF13_0316 40S ribosomal protein S13, putative; K02953 smal... 202 2e-52
tpv:TP01_0502 40S ribosomal protein S13; K02953 small subunit ... 198 4e-51
ath:AT3G60770 40S ribosomal protein S13 (RPS13A); K02953 small... 197 5e-51
cpv:cgd5_2210 40S ribosomal protein S13 ; K02953 small subunit... 197 9e-51
ath:AT4G00100 ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN... 195 3e-50
mmu:68052 Rps13, 2700063M04Rik, MGC102403, MGC118043; ribosoma... 178 3e-45
hsa:6207 RPS13; ribosomal protein S13 (EC:3.6.5.3); K02953 sma... 178 3e-45
sce:YDR064W RPS13, RPS13B, RPS13C; Rps13p; K02953 small subuni... 177 7e-45
xla:380043 rps13, MGC68963; ribosomal protein S13; K02953 smal... 176 2e-44
dre:415169 rps13, fb14f11, fd13f08, fd60g01, wu:fb14f11, wu:fd... 176 2e-44
mmu:628061 Gm6834, EG628061; predicted pseudogene 6834 176 2e-44
bbo:BBOV_I003470 19.m02317; 40S ribosomal protein S13; K02953 ... 175 3e-44
cel:C16A3.9 rps-13; Ribosomal Protein, Small subunit family me... 175 4e-44
mmu:100043695 Gm15483, OTTMUSG00000022580; predicted gene 15483 173 1e-43
mmu:668239 Gm12270, OTTMUSG00000005828; predicted gene 12270 168 5e-42
dre:568537 zinc finger protein 111-like 35.8 0.031
mmu:229905 Ccbl2, BC037135, C430041M20, KATIII, Kat3; cysteine... 27.7 9.4
xla:734350 mybbp1a, MGC98482; MYB binding protein (P160) 1a; K... 27.7 9.6
mmu:18432 Mybbp1a, AL024407, AU019902, P160, p160MBP, p67MBP; ... 27.7 9.8
> tgo:TGME49_070380 40S ribosomal protein S13, putative ; K02953
small subunit ribosomal protein S13e
Length=151
Score = 221 bits (562), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 120/126 (95%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++KP +VE+HI KLA+KGQTPSQIGVTLRD FG+PQVKSVTG+KILRILK QG+APE+P
Sbjct 26 LKIKPSDVEEHIAKLAKKGQTPSQIGVTLRDSFGVPQVKSVTGNKILRILKLQGLAPELP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY+LIKKAV+VRKHLE++RKD D+KFRLILVESRIHRL RYY+RTKQLPATWKYQS+T
Sbjct 86 EDLYYLIKKAVSVRKHLERNRKDKDAKFRLILVESRIHRLARYYKRTKQLPATWKYQSAT 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> pfa:PF13_0316 40S ribosomal protein S13, putative; K02953 small
subunit ribosomal protein S13e
Length=151
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L+ KP E+ED I+KLA+KGQTPSQIG TLRD +GIPQVKSVTG+KILRIL+ QGIA IP
Sbjct 26 LKQKPSEIEDAIIKLAKKGQTPSQIGATLRDNYGIPQVKSVTGNKILRILRAQGIATTIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLYFLIKKAV++RKHLEK++KD D KFRLIL ES+IHR+ RYY+R K LP+ WKYQSST
Sbjct 86 EDLYFLIKKAVSMRKHLEKNKKDKDCKFRLILTESKIHRISRYYKRKKLLPSNWKYQSST 145
Query 121 ASALVA 126
ASAL+A
Sbjct 146 ASALIA 151
> tpv:TP01_0502 40S ribosomal protein S13; K02953 small subunit
ribosomal protein S13e
Length=151
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 109/126 (86%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L+ KP EVE+ I KLA+KGQTPSQIGV+LRD IPQVK+VT +KILRILK QG+APEIP
Sbjct 26 LKTKPFEVEEQIAKLAKKGQTPSQIGVSLRDSMAIPQVKAVTNNKILRILKAQGLAPEIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLYFLIKKAV++RKH+E + D DSKFRLILVESRIHRL RYY++ +QLPATWKYQ+ST
Sbjct 86 EDLYFLIKKAVSMRKHMEHNLNDKDSKFRLILVESRIHRLARYYKKKRQLPATWKYQAST 145
Query 121 ASALVA 126
A LVA
Sbjct 146 AGTLVA 151
> ath:AT3G60770 40S ribosomal protein S13 (RPS13A); K02953 small
subunit ribosomal protein S13e
Length=151
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 109/126 (86%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L+ PQ+V++ I K A+KG TPSQIGV LRD GIPQVKSVTGSKILRILK G+APEIP
Sbjct 26 LKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVA+RKHLE++RKD DSKFRLILVESRIHRL RYY++TK+LP WKY+S+T
Sbjct 86 EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTT 145
Query 121 ASALVA 126
AS LVA
Sbjct 146 ASTLVA 151
> cpv:cgd5_2210 40S ribosomal protein S13 ; K02953 small subunit
ribosomal protein S13e
Length=154
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
+++KP E ED I KLARKG TPSQIGVTLRD GIP V+S+TGSKILRILKK G+AP+IP
Sbjct 29 IKLKPSEAEDLITKLARKGLTPSQIGVTLRDSHGIPMVQSLTGSKILRILKKNGLAPDIP 88
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLYFLIK+AV++RKHLEK RKD +K+RLILVESRIHRL RY++R+KQLPA WKYQ++T
Sbjct 89 EDLYFLIKRAVSIRKHLEKFRKDTAAKYRLILVESRIHRLARYFKRSKQLPANWKYQAAT 148
Query 121 ASALVA 126
AS LVA
Sbjct 149 ASTLVA 154
> ath:AT4G00100 ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN
S13A); structural constituent of ribosome; K02953 small subunit
ribosomal protein S13e
Length=151
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 108/126 (85%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L+ Q+V++ I K A+KG TPSQIGV LRD GIPQVKSVTGSKILRILK G+APEIP
Sbjct 26 LKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVA+RKHLE++RKD DSKFRLILVESRIHRL RYY++TK+LP WKY+S+T
Sbjct 86 EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTT 145
Query 121 ASALVA 126
AS LVA
Sbjct 146 ASTLVA 151
> mmu:68052 Rps13, 2700063M04Rik, MGC102403, MGC118043; ribosomal
protein S13 (EC:3.6.5.3); K02953 small subunit ribosomal
protein S13e
Length=151
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 106/126 (84%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KLA+KG TPSQIGV LRD G+ QV+ VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLIL+ESRIHRL RYY+ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> hsa:6207 RPS13; ribosomal protein S13 (EC:3.6.5.3); K02953 small
subunit ribosomal protein S13e
Length=151
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 106/126 (84%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KLA+KG TPSQIGV LRD G+ QV+ VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLIL+ESRIHRL RYY+ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> sce:YDR064W RPS13, RPS13B, RPS13C; Rps13p; K02953 small subunit
ribosomal protein S13e
Length=151
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 0/125 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
++ + V + IVK ARKG TPSQIGV LRD G+ Q + +TG+KI+RILK G+APEIP
Sbjct 26 FKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY+LIKKAV+VRKHLE++RKD D+KFRLIL+ESRIHRL RYYR LP WKY+S+T
Sbjct 86 EDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKYESAT 145
Query 121 ASALV 125
ASALV
Sbjct 146 ASALV 150
> xla:380043 rps13, MGC68963; ribosomal protein S13; K02953 small
subunit ribosomal protein S13e
Length=151
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 105/126 (83%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KLA+KG TPSQIGV LRD G+ QV+ VTG+KILRILK + +AP++P
Sbjct 26 LKLTSDDVKEQIFKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKALAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLIL+ESRIHRL RYY+ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> dre:415169 rps13, fb14f11, fd13f08, fd60g01, wu:fb14f11, wu:fd13f08,
wu:fd60g01, zgc:91809; ribosomal protein S13 (EC:3.6.5.3);
K02953 small subunit ribosomal protein S13e
Length=151
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 105/126 (83%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KLA+KG TPSQIGV LRD G+ QV+ VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDDVKEQIFKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLILVESRIHRL RYY+ + L WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILVESRIHRLARYYKTRRVLAPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> mmu:628061 Gm6834, EG628061; predicted pseudogene 6834
Length=151
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 105/126 (83%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KL +KG TPSQIGV LRD G+ QV+ VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDDVKEKIYKLPKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLIL+ESRIHRL RYY+ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> bbo:BBOV_I003470 19.m02317; 40S ribosomal protein S13; K02953
small subunit ribosomal protein S13e
Length=151
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 102/126 (80%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
++ KP +VE IVKLA+KG TPSQIGV LRD IP VK++T +KILRIL+ G AP+IP
Sbjct 26 VKTKPLDVEQQIVKLAKKGMTPSQIGVVLRDSNAIPLVKTITNNKILRILRGHGWAPDIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLYFL+KKAV +RKH+E + D DSKFRLILVESRIHRL RY+++ ++LPA WKY+S T
Sbjct 86 EDLYFLVKKAVVMRKHMEHNLNDKDSKFRLILVESRIHRLARYFKKKRRLPANWKYKSET 145
Query 121 ASALVA 126
ASAL+
Sbjct 146 ASALLG 151
> cel:C16A3.9 rps-13; Ribosomal Protein, Small subunit family
member (rps-13); K02953 small subunit ribosomal protein S13e
Length=151
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 102/121 (84%), Gaps = 0/121 (0%)
Query 6 QEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIPEDLYF 65
+EV+D IVK+A+KG PSQIGV LRD G+ QV+ + G+KI RILK +G+APE+PEDLY
Sbjct 31 EEVQDQIVKMAKKGLRPSQIGVILRDSHGVGQVRRLAGNKIFRILKSKGMAPELPEDLYH 90
Query 66 LIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSSTASALV 125
L+KKAVA+RKHLE+ RKD DSK+RLILVESRIHRL RYY+ +QLP TWKY+S TA++LV
Sbjct 91 LVKKAVAIRKHLERSRKDIDSKYRLILVESRIHRLARYYKTKRQLPPTWKYESGTAASLV 150
Query 126 A 126
+
Sbjct 151 S 151
> mmu:100043695 Gm15483, OTTMUSG00000022580; predicted gene 15483
Length=151
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/126 (66%), Positives = 103/126 (81%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ V++ I KL +KG TPSQIGV LRD G+ QV VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDHVKEQIYKLPKKGLTPSQIGVILRDSHGVAQVHFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KFRLIL+ES+IHRL RYY+ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESKIHRLARYYKTKRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> mmu:668239 Gm12270, OTTMUSG00000005828; predicted gene 12270
Length=151
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 103/126 (81%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L++ +V++ I KLA+KG TPSQIGV LRD G+ QV+ VTG+KILRILK +G+AP++P
Sbjct 26 LKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLY LIKKAVAVRKHLE++RKD D+KF LI +E+RIHRL Y++ + LP WKY+SST
Sbjct 86 EDLYHLIKKAVAVRKHLERNRKDKDAKFCLIPIETRIHRLAXYFKTKRVLPPNWKYESST 145
Query 121 ASALVA 126
ASALVA
Sbjct 146 ASALVA 151
> dre:568537 zinc finger protein 111-like
Length=512
Score = 35.8 bits (81), Expect = 0.031, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query 20 QTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIPEDLYFLIKKAVAV 73
++P + VT+RD+FG +KS+T L + G+A +PED L ++AVA+
Sbjct 150 ESPVVLAVTIRDEFGKVDLKSITAGH-LSNTSEDGVASVLPEDGSELPQEAVAL 202
> mmu:229905 Ccbl2, BC037135, C430041M20, KATIII, Kat3; cysteine
conjugate-beta lyase 2 (EC:2.6.1.7 4.4.1.13 2.6.1.63); K00816
kynurenine---oxoglutarate transaminase / cysteine-S-conjugate
beta-lyase / glutamine---phenylpyruvate transaminase
[EC:2.6.1.7 4.4.1.13 2.6.1.64]
Length=420
Score = 27.7 bits (60), Expect = 9.4, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 0/57 (0%)
Query 35 IPQVKSVTGSKILRILKKQGIAPEIPEDLYFLIKKAVAVRKHLEKDRKDADSKFRLI 91
+P+ V +++R+L G+ P +P+ YF+I ++ L D ++ +
Sbjct 308 LPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFV 364
> xla:734350 mybbp1a, MGC98482; MYB binding protein (P160) 1a;
K02331 DNA polymerase phi subunit [EC:2.7.7.7]
Length=946
Score = 27.7 bits (60), Expect = 9.6, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query 29 LRDQFGIPQVKSVTGSKILRILKKQGIAPEIPEDLYFLIKKAVAVR-------KHLEKDR 81
LRD F P + S+ + Q + +PE F ++K + R HLEKD
Sbjct 408 LRDMFLQPDLNSLVDFSTANQKRAQDASLNVPERAVFRLRKWIIHRLVSLVDHLHLEKDE 467
Query 82 KDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQS 118
+ R L H + + T Q+P T ++ S
Sbjct 468 AVVEQIARFCL----FHAFFKTKKATPQIPETKQHFS 500
> mmu:18432 Mybbp1a, AL024407, AU019902, P160, p160MBP, p67MBP;
MYB binding protein (P160) 1a; K02331 DNA polymerase phi subunit
[EC:2.7.7.7]
Length=1344
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query 29 LRDQFGIPQVKSVTGSKILRILKKQGIAPEIPEDLYFLIKKAVAVR-------KHLEKDR 81
LRD F P + S+ + Q + +PE F ++K + R HLEKD
Sbjct 408 LRDMFLQPDLNSLVDFSTANQKRAQDASLNVPERAVFRLRKWIIHRLVSLVDHLHLEKDE 467
Query 82 KDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQS 118
+ R L H + + T Q+P T ++ S
Sbjct 468 AVVEQIARFCL----FHAFFKTKKATPQIPETKQHFS 500
Lambda K H
0.320 0.135 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2059772308
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40