bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0316_orf1
Length=277
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3, ... 226 5e-59
tpv:TP01_0879 hypothetical protein 191 2e-48
bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-bin... 187 4e-47
sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protei... 139 1e-32
ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putativ... 139 2e-32
ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putativ... 137 4e-32
ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putativ... 136 8e-32
xla:398218 dazap1; DAZ associated protein 1; K14411 RNA-bindin... 135 1e-31
mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein... 135 1e-31
tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-b... 135 2e-31
ath:AT5G55550 RNA recognition motif (RRM)-containing protein; ... 134 3e-31
hsa:26528 DAZAP1, MGC19907; DAZ associated protein 1; K14411 R... 134 3e-31
mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193, M... 132 2e-30
hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2 (... 132 2e-30
dre:561459 dazap1; DAZ associated protein 1; K14411 RNA-bindin... 130 7e-30
ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putativ... 130 7e-30
dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:6... 130 8e-30
xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi 128 2e-29
dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi... 128 2e-29
xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h... 128 2e-29
cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);... 127 4e-29
dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d0... 127 4e-29
ath:AT4G26650 RNA recognition motif (RRM)-containing protein; ... 127 5e-29
ath:AT3G13224 RNA recognition motif (RRM)-containing protein 127 5e-29
xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi hom... 127 6e-29
hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-bind... 127 6e-29
mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Dro... 126 7e-29
cpv:cgd5_700 musashi. RRM domain containing protein, splicing ... 126 7e-29
xla:447602 MGC84815 protein 125 1e-28
dre:323529 fc01g05, wu:fc01g05; zgc:77366 125 1e-28
dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08, z... 120 5e-27
ath:AT1G17640 RNA recognition motif (RRM)-containing protein 118 3e-26
cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1... 118 3e-26
ath:AT5G40490 RNA recognition motif (RRM)-containing protein; ... 115 1e-25
mmu:11991 Hnrnpd, Auf1, C230004L04, Hnrpd; heterogeneous nucle... 115 1e-25
cpv:cgd5_3270 RNA recognition motif (RRM)-containing protein 115 2e-25
ath:AT1G58470 ATRBP1; ATRBP1 (ARABIDOPSIS THALIANA RNA-BINDING... 115 2e-25
hsa:3184 HNRNPD, AUF1, AUF1A, HNRPD, P37, hnRNPD0; heterogeneo... 114 5e-25
dre:406594 fd36h02, wu:fd36h02; zgc:77052 113 7e-25
dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleopr... 112 1e-24
mmu:15384 Hnrnpab, 3010025C11Rik, CBF-A, Cgbfa, Hnrpab; hetero... 112 1e-24
mmu:545592 Gm11847, OTTMUSG00000004599; heterogeneous nuclear ... 112 2e-24
hsa:3182 HNRNPAB, ABBP1, FLJ40338, HNRPAB; heterogeneous nucle... 112 2e-24
mmu:100505153 heterogeneous nuclear ribonucleoprotein A3-like 111 2e-24
mmu:50926 Hnrpdl, AA407431, AA959857, D5Ertd650e, D5Wsu145e, J... 111 2e-24
hsa:9987 HNRPDL, HNRNP, JKTBP, JKTBP2, laAUF1; heterogeneous n... 111 2e-24
mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;... 111 3e-24
mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-l... 111 3e-24
hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,... 111 3e-24
dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear r... 111 3e-24
> tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3,
putative ; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=430
Score = 226 bits (577), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 138/179 (77%), Gaps = 5/179 (2%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
+E +RK+FVGGL+R+TT +SLR YF +G V +EVLFDK TGRSRGFGF+TF P+ +
Sbjct 118 KELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPV 177
Query 61 NNVVDRHHTIDESQVEVRRAIPREEARQT-QPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
V D HT+D +QVEVRRAIPREEAR P DRD +GR+F+GG+ DDV DE L+
Sbjct 178 ARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRD----AGRLFVGGISDDVNDESLR 233
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPNAEAKRAQPR 178
+F +GE+ SANVMVDR+ NRPRGFGF+I++NP+DAEKA+G HK LG + EAKRAQPR
Sbjct 234 AYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGSHKKLGVHCEAKRAQPR 292
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query 78 RRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDR 137
+R+ P+E ++ Q R+ +F+GGL T + L+ +F ++G++ + V+ D+
Sbjct 109 QRSPPQEPDKELQMRK----------LFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDK 158
Query 138 ETNRPRGFGFIIYKNPEDAEKALGI-HKDLGPNAEAKRAQPRTQ 180
T R RGFGFI + P+ + + H G E +RA PR +
Sbjct 159 FTGRSRGFGFITFTTPDPVARVADMRHTVDGTQVEVRRAIPREE 202
> tpv:TP01_0879 hypothetical protein
Length=322
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 128/181 (70%), Gaps = 5/181 (2%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIF GGL R+TT E L+ YFS FG V HTE++ DK +GRSRGFGFVTF E E++N V+ +
Sbjct 57 KIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVNTVLRK 116
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126
HTID + +V+ A+ +E+A+ P+ D+ + R+F+GG+ + +T+ +D+F+R+G
Sbjct 117 SHTIDGVEADVKLAVRKEKAKILAPQYDQ-----TKRIFVGGVSEKITESYFRDYFARYG 171
Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPNAEAKRAQPRTQGPRMRM 186
+ S N +VDR TNRPRG+GF+IY+N EDAEK++G+H LG N EAK AQP+ M
Sbjct 172 PIASYNYLVDRATNRPRGYGFVIYENMEDAEKSVGLHMSLGRNCEAKFAQPKNSEKEETM 231
Query 187 L 187
+
Sbjct 232 I 232
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
++IFVGG++ T R+YF+ +G + L D+ T R RG+GFV +E E V
Sbjct 147 KRIFVGGVSEKITESYFRDYFARYGPIASYNYLVDRATNRPRGYGFVIYENMEDAEKSVG 206
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRD 96
H ++ + E + A P+ ++ D D
Sbjct 207 LHMSLGRN-CEAKFAQPKNSEKEETMINDFD 236
> bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-binding
protein Musashi
Length=306
Score = 187 bits (475), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 124/180 (68%), Gaps = 6/180 (3%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIF GGLNR+TTAE+LR YFS +G V H+E++ DK TGRSRGFGFVTF + V+
Sbjct 33 KIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVADKTTGRSRGFGFVTFSNDAALKAVLAV 92
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126
H ID +V++AI +E AR P R E R+F+GG+ D+++++ KD+F ++G
Sbjct 93 SHKIDNVLADVKQAIKKERARDLLPTR-----EEVNRIFVGGIADNISEDEFKDYFGKYG 147
Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPNAEAKRAQPR-TQGPRMR 185
+ + N +VD+ TN+PRGFGF++Y++P D +KA+G H LG N EAKRAQPR + G M+
Sbjct 148 SVLNYNFIVDKSTNKPRGFGFVVYEDPADVDKAIGHHTKLGRNCEAKRAQPRPSSGKNMQ 207
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
+ +IFVGG+ N + + ++YF +G V + + DK T + RGFGFV +E+P ++ +
Sbjct 122 VNRIFVGGIADNISEDEFKDYFGKYGSVLNYNFIVDKSTNKPRGFGFVVYEDPADVDKAI 181
Query 65 DRHHTIDESQVEVRRAIPREEARQTQPRRDRD 96
HHT E +RA PR + + +RD
Sbjct 182 G-HHTKLGRNCEAKRAQPRPSSGKNMQPSNRD 212
> sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protein
Musashi
Length=534
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 110/176 (62%), Gaps = 18/176 (10%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGLN +TT ++LREYF +G V +++ D TGRSRGFGF++FE+P +++ VV
Sbjct 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126
H +D ++ +RAIPR+E +T G++F+GG+G DV + ++FFS++G
Sbjct 220 QHILDGKVIDPKRAIPRDEQDKT------------GKIFVGGIGPDVRPKEFEEFFSQWG 267
Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIH----KDLGPNAEAKRAQPR 178
+ A +M+D++T + RGFGF+ Y + + ++ KD E KRA+PR
Sbjct 268 TIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDR--KIEIKRAEPR 321
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E+ KIFVGG+ + + E+FS +G + +++ DK TG+SRGFGFVT++ + +
Sbjct 238 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297
Query 61 NNVVDRHHTID--ESQVEVRRAIPR 83
+ V ++ ID + ++E++RA PR
Sbjct 298 DRVC-QNKFIDFKDRKIEIKRAEPR 321
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query 88 QTQPRRDR-DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFG 146
QT+ R + D ++ S ++FIGGL D T++ L+++F ++G +T +M D T R RGFG
Sbjct 144 QTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFG 203
Query 147 FIIYKNPEDAEKALGIHKDL-GPNAEAKRAQPRTQGPRMRMLAMGG 191
F+ ++ P ++ + L G + KRA PR + + + +GG
Sbjct 204 FLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQDKTGKIFVGG 249
> ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=494
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GG++ +T E L+EYFSSFG V +L D+ TGR+RGFGFV F +P V+
Sbjct 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSG------RVFIGGLGDDVTDEVLKD 120
H ID VE ++A+PR++ + G ++F+GGL VT+ K
Sbjct 67 KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKT 126
Query 121 FFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQPR 178
+F +FG T VM D T RPRGFGFI Y + E EK L H+ G E KRA P+
Sbjct 127 YFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPK 186
Query 179 TQGP 182
P
Sbjct 187 ELSP 190
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
++G++FIGG+ D +E LK++FS FGE+ A ++ DR T R RGFGF+++ +P AE
Sbjct 3 SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62
Query 159 ALG-IHKDLGPNAEAKRAQPR 178
+ H G EAK+A PR
Sbjct 63 VITEKHNIDGRLVEAKKAVPR 83
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
RKIFVGGL + T + YF FG V++D T R RGFGF+T++ E + V+
Sbjct 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query 66 R-HHTIDESQVEVRRAIPRE 84
+ H ++ VEV+RA+P+E
Sbjct 168 KTFHELNGKMVEVKRAVPKE 187
> ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=411
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 116/188 (61%), Gaps = 14/188 (7%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+FVGG++ T + LRE+F+++G V V+ DKLTGR RGFGFV F +P ++ V+
Sbjct 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSG--------RVFIGGLGDDVTDEVL 118
H+ID +V+V+RA+ REE + + + + + +SG ++F+GGL +TDE
Sbjct 67 KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEF 126
Query 119 KDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHK---DL-GPNAEAKR 174
+ +F +G +T +M D+ TNRPRGFGF+ + + EDA ++ +HK DL G E KR
Sbjct 127 RQYFEVYGPVTDVAIMYDQATNRPRGFGFVSF-DSEDAVDSV-LHKTFHDLSGKQVEVKR 184
Query 175 AQPRTQGP 182
A P+ P
Sbjct 185 ALPKDANP 192
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL T E R+YF +G V +++D+ T R RGFGFV+F+ + +++V+
Sbjct 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query 66 R-HHTIDESQVEVRRAIPRE 84
+ H + QVEV+RA+P++
Sbjct 170 KTFHDLSGKQVEVKRALPKD 189
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 43/61 (70%), Gaps = 0/61 (0%)
Query 100 NSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKA 159
+ G++F+GG+ + ++ L++ F+ +GE++ A VM D+ T RPRGFGF+I+ +P ++
Sbjct 4 DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63
Query 160 L 160
L
Sbjct 64 L 64
> ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=431
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GG++ T+ + LR+YF SFG V ++ D+ TGR+RGFGFV F +P VV
Sbjct 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query 67 HHTIDESQVEVRRAIPREEA---RQTQPRRDRDPA-ENSGRVFIGGLGDDVTDEVLKDFF 122
H ID VE ++A+PR++ ++ P NS ++F+GGL VT+ K +F
Sbjct 67 KHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYF 126
Query 123 SRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQPR 178
++FG +T VM D T RPRGFGFI Y + E +K L H+ G E K A P+
Sbjct 127 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPK 184
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL + T ++YF+ FG + V++D T R RGFGF++++ E ++ V+
Sbjct 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query 66 R-HHTIDESQVEVRRAIPREEARQTQ 90
+ H ++ VEV+ A+P++ A T
Sbjct 166 KTFHELNGKMVEVKLAVPKDMALNTM 191
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query 101 SGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL 160
S ++FIGG+ + +++ L+D+F FGE+ A +M DR T R RGFGF+++ +P AE+ +
Sbjct 5 SCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVV 64
Query 161 GI-HKDLGPNAEAKRAQPR 178
+ H G EAK+A PR
Sbjct 65 LLKHIIDGKIVEAKKAVPR 83
> xla:398218 dazap1; DAZ associated protein 1; K14411 RNA-binding
protein Musashi
Length=360
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 112/185 (60%), Gaps = 16/185 (8%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV-D 65
K+FVGGL+ +TT E+LR YFS +G V ++ DK T +SRGFGFV F++P + V+
Sbjct 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query 66 RHHTIDESQVEVR----------RAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTD 115
R HT+D ++ + R+ PRE +Q +PR + S ++F+GG+ + +
Sbjct 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTEN---SRSNKIFVGGIPHNCGE 127
Query 116 EVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEAK 173
LK++F+RFG +T ++ D E RPRGFGFI +++ + ++A+ + H +G E K
Sbjct 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187
Query 174 RAQPR 178
RA+PR
Sbjct 188 RAEPR 192
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIFVGG+ N L+EYF+ FG V +++D R RGFGF+TFE+ ++++ V+
Sbjct 115 KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 174
Query 67 H-HTIDESQVEVRRAIPREEARQT 89
H H I +VEV+RA PR+ QT
Sbjct 175 HFHDIMGKKVEVKRAEPRDSKSQT 198
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query 102 GRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALG 161
G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P L
Sbjct 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query 162 I--HKDLGPNAEAKRAQPRTQGPRMRMLAMGGPMGMPSPYRMEDPRYAVARTGYGGAGGA 219
H G N + K PR P G ++ ++PR +R+ GG
Sbjct 70 SRPHTLDGRNIDPKPCTPRGMQPERSRPREG--------WQQKEPRTENSRSNKIFVGGI 121
Query 220 P 220
P
Sbjct 122 P 122
> mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein
1; K14411 RNA-binding protein Musashi
Length=406
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 39/250 (15%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
+ K+FVGGL+ +TT E+LR YFS +G V ++ DK T +SRGFGFV F++P + V+
Sbjct 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query 65 -DRHHTIDESQVEVRRAIPR---------EEARQTQPRRDRDPAENSGRVFIGGLGDDVT 114
R HT+D ++ + PR +E Q PR D + S ++F+GG+ +
Sbjct 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSD---SSKSNKIFVGGIPHNCG 125
Query 115 DEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEA 172
+ L+++F +FG +T ++ D E RPRGFGFI +++ + ++A+ + H +G E
Sbjct 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 185
Query 173 KRAQPR-------------TQGPRMRMLAMGGPMGMPSPYRMEDPRYAVARTGYGGAG-G 218
KRA+PR G R+ A G G P P + GYG G
Sbjct 186 KRAEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPP---------TWQQGYGPQGMW 236
Query 219 APA-QLYGGY 227
PA Q GGY
Sbjct 237 VPAGQAIGGY 246
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query 98 AENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAE 157
A+ G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P
Sbjct 6 ADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 65
Query 158 KALGI--HKDLGPNAEAKRAQPRTQGP 182
L H G N + K PR P
Sbjct 66 TVLASRPHTLDGRNIDPKPCTPRGMQP 92
> tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-binding
protein Musashi
Length=458
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 7/174 (4%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV-D 65
KIFVG LN+ TT E+L Y FG V V+ DK+TG SRGFGFVTF + ++ + V
Sbjct 96 KIFVGNLNQQTTTETLSAYMKQFGAVEDVVVMVDKVTGNSRGFGFVTFADASSVTSCVGA 155
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFS-R 124
H ID +V+VR A+P+ + D+ +VF+GG+ + +T+E L F S R
Sbjct 156 EKHVIDGQEVDVRNAVPKGQMVNKNADDDQ-----HSKVFVGGIPETLTEERLSAFLSER 210
Query 125 FGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPNAEAKRAQPR 178
FG + ++M D+ T R RGFGF+ ++ P A+ +G H G E K+A+PR
Sbjct 211 FGSVKKVSLMHDKNTGRCRGFGFVTFQFPHSAQNCVGKHDVDGHVIEVKKAEPR 264
> ath:AT5G55550 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=460
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 106/191 (55%), Gaps = 10/191 (5%)
Query 2 ERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETIN 61
E L K+F+GG++ +T E LR+YFS++G V ++ D+ TGR+RGFGF+ F +P
Sbjct 2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSE 61
Query 62 NVVDRHHTIDESQVEVRRAIPREE----ARQTQPRRDRDPAENSG----RVFIGGLGDDV 113
V+ H ID VE ++A+PR++ R P P G ++F+GGL +
Sbjct 62 RVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSI 121
Query 114 TDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAE 171
T+E K++F +FG + VM D T RPRGFGFI + + + ++ L H+ G E
Sbjct 122 TEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVE 181
Query 172 AKRAQPRTQGP 182
KRA P+ P
Sbjct 182 VKRAVPKEISP 192
> hsa:26528 DAZAP1, MGC19907; DAZ associated protein 1; K14411
RNA-binding protein Musashi
Length=407
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 15/186 (8%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
+ K+FVGGL+ +TT E+LR YFS +G V ++ DK T +SRGFGFV F++P + V+
Sbjct 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query 65 -DRHHTIDESQVEVRRAIPR---------EEARQTQPRRDRDPAENSGRVFIGGLGDDVT 114
R HT+D ++ + PR +E Q PR D S ++F+GG+ +
Sbjct 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCG 125
Query 115 DEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEA 172
+ L+++F +FG +T ++ D E RPRGFGFI +++ + ++A+ + H +G E
Sbjct 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 185
Query 173 KRAQPR 178
KRA+PR
Sbjct 186 KRAEPR 191
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query 98 AENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAE 157
A+ G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P
Sbjct 6 ADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 65
Query 158 KALGI--HKDLGPNAEAKRAQPRTQGP 182
L H G N + K PR P
Sbjct 66 TVLASRPHTLDGRNIDPKPCTPRGMQP 92
> mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193,
MGC118040, MGC130496, Msi2h; Musashi homolog 2 (Drosophila);
K14411 RNA-binding protein Musashi
Length=346
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ T+ +SLR+YFS FG + V+ D T RSRGFGFVTF +P +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
HH +D ++ + A P R+ QP+ + ++F+GGL + E +K +F +F
Sbjct 82 PHHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSANTVVEDVKQYFEQF 133
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++N + EK IH N E K+AQP+
Sbjct 134 GKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NT E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 66 RH-HTIDESQVEVRRAIPRE 84
H H I+ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + G++FIGGL + + L+D+FS+FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 156 AEKALG-IHKDL-GPNAEAKRAQPRTQGPRM 184
+K LG H +L + K A PR P+M
Sbjct 75 VDKVLGQPHHELDSKTIDPKVAFPRRAQPKM 105
> hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2
(Drosophila); K14411 RNA-binding protein Musashi
Length=328
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ T+ +SLR+YFS FG + V+ D T RSRGFGFVTF +P +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
HH +D ++ + A P R+ QP+ + ++F+GGL + E +K +F +F
Sbjct 82 PHHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSANTVVEDVKQYFEQF 133
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++N + EK IH N E K+AQP+
Sbjct 134 GKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NT E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 66 RH-HTIDESQVEVRRAIPRE 84
H H I+ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + G++FIGGL + + L+D+FS+FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 156 AEKALGI-HKDL-GPNAEAKRAQPRTQGPRM 184
+K LG H +L + K A PR P+M
Sbjct 75 VDKVLGQPHHELDSKTIDPKVAFPRRAQPKM 105
> dre:561459 dazap1; DAZ associated protein 1; K14411 RNA-binding
protein Musashi
Length=418
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 144/287 (50%), Gaps = 48/287 (16%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
+ K+FVGGL+ +TT E+LR YFS +G V ++ DK T +SRGFGFV F++P + V+
Sbjct 22 IGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVL 81
Query 65 D-RHHTIDESQVEVRRAIPREEARQTQPRRDRD-------PAENSGRVFIGGLGDDVTDE 116
D + H +D ++ + PR Q + R +D + S ++F+GG+ + +
Sbjct 82 DTKPHNLDGRNIDPKPCTPR--GMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEA 139
Query 117 VLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEAKR 174
L+D+F+RFG +T ++ D E RPRGFGFI ++ + ++A+ + H +G E K+
Sbjct 140 ELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKK 199
Query 175 AQPR-------------TQGPRMRMLAMGGPMGMPSPYRMED--PRYAVART----GYG- 214
A+PR GPR + A G P+P + P+ T GYG
Sbjct 200 AEPRDSKAPAPGQLGANQWGPRAIISAANGWAAQPAPTWQQSYGPQGVWVSTGQPLGYGP 259
Query 215 ---GAGGAPAQLYGGYNYAYHPYYAAYYAQMAAAYGGGGYGGYSPEG 258
GAPAQ +N A + AA GG+G +P+G
Sbjct 260 PLPAGRGAPAQAPSPFN-----------AFLVAAPPTGGFG--APQG 293
> ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=404
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 10/186 (5%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GG++ +T LREYFS+FG V V+ +K TGR RGFGFV F +P I+ V+
Sbjct 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query 67 HHTIDESQVEVRRAIPREEARQT------QPRRDRDPAEN--SGRVFIGGLGDDVTDEVL 118
H ID V+V+RA+ REE R+ D N + ++F+GGL +T +
Sbjct 67 KHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDEF 126
Query 119 KDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQ 176
+ +F +G ++ A +M+D+ T RPRGFGF+ + + + + L H G E KRA
Sbjct 127 RAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRAL 186
Query 177 PRTQGP 182
P+ P
Sbjct 187 PKDANP 192
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL T++ R YF ++G V ++ D+ T R RGFGFV+F+ ++++ V+
Sbjct 110 KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLH 169
Query 66 R-HHTIDESQVEVRRAIPRE 84
+ H ++ QVEV+RA+P++
Sbjct 170 KTFHDLNGKQVEVKRALPKD 189
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query 100 NSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKA 159
+ G++FIGG+ D + +L+++FS FGE+ VM ++ T RPRGFGF+ + +P ++
Sbjct 4 DQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRV 63
Query 160 L-GIHKDLGPNAEAKRAQPRTQ 180
L H + + KRA R +
Sbjct 64 LQDKHHIDNRDVDVKRAMSREE 85
> dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:63812;
musashi homolog 2b (Drosophila); K14411 RNA-binding
protein Musashi
Length=408
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ T+ +SLR+YFS FG + V+ D T RSRGFGFVTF + +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
HH +D ++ + A P R+ QP+ + ++F+GGL + E +K +F +F
Sbjct 82 PHHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSANTVVEDVKQYFEQF 133
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++N + EK IH N E K+AQP+
Sbjct 134 GKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NT E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 66 RH-HTIDESQVEVRRAIPRE 84
H H I+ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + G++FIGGL + + L+D+FS+FGE+ VM D T R RGFGF+ + +
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAAS 74
Query 156 AEKALG-IHKDL-GPNAEAKRAQPRTQGPRM 184
+K L H +L + K A PR P+M
Sbjct 75 VDKVLAQPHHELDSKTIDPKVAFPRRAQPKM 105
> xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi
Length=340
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ TT E LREYFS FG V V+ D LT RSRGFGFVTF + ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query 67 H-HTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H +D ++ + A P R+ QP+ + ++F+GGL + T E +K +F +F
Sbjct 81 SRHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++ + EK IH N E K+AQP+
Sbjct 133 GKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQPK 187
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E +++YF FG V ++FDK T R RGFGFVTFE + + V D
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCD 168
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGR-VFIGGLG 110
H H I+ VE ++A P+E T R R G F+ G+G
Sbjct 169 IHFHEINNKMVECKKAQPKEVMSPTGSVRGRSRVMPYGMDAFMLGIG 215
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D A + ++FIGGL T E L+++FS FG++ VM D T R RGFGF+ + +
Sbjct 14 DSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 156 AEKALGI--HKDLGPNAEAKRAQPRTQGPRM 184
+K L H+ + K A PR P+M
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKM 104
> dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi
homolog 1 (Drosophila); K14411 RNA-binding protein Musashi
Length=330
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 124/239 (51%), Gaps = 30/239 (12%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ TT E L++YF FG V + V+ D +T RSRGFGFVTF + ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H +D ++ + A PR + QP+ + ++F+GGL + T E +K +F +F
Sbjct 81 TRHELDSKTIDPKVAFPR----RAQPKL----VTRTKKIFVGGLSVNTTIEDVKQYFDQF 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR----- 178
G++ A +M D+ TNR RGFGF+ ++N + EK IH N E K+AQP+
Sbjct 133 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSP 192
Query 179 TQGPRMRMLAMGGPMGMPSPYRMEDPRYAVARTGYGG------AGGAPAQLYGGYNYAY 231
T R R M PY M+ + GY G AG + L GY Y +
Sbjct 193 TGSSRGRARVM--------PYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTPGYTYQF 243
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDR 95
H H I+ VE ++A P+E T R R
Sbjct 169 IHFHEINNKMVECKKAQPKEVMSPTGSSRGR 199
> xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h;
musashi homolog 1; K14411 RNA-binding protein Musashi
Length=347
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ TT E LREYFS FG V V+ D LT RSRGFGFVTF + ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query 67 H-HTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H +D ++ + A P R+ QP+ + ++F+GGL + T E +K +F +F
Sbjct 81 SRHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++ + EK IH N E K+AQP+
Sbjct 133 GKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPK 187
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E +++YF FG V ++FDK T R RGFGFVTFE + + + D
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDR 95
H H I+ VE ++A P+E T R R
Sbjct 169 IHFHEINNKMVECKKAQPKEVMSPTGSVRGR 199
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D A + ++FIGGL T E L+++FS FG++ VM D T R RGFGF+ + +
Sbjct 14 DSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 156 AEKALGI--HKDLGPNAEAKRAQPRTQGPRM 184
+K L H+ + K A PR P+M
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKM 104
> cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);
K14411 RNA-binding protein Musashi
Length=320
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 26/211 (12%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV-D 65
K+F+GGL+ TTAE+LR+YF FG V V+ D T R+RGFGF+TF +P +++ V+ +
Sbjct 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
R H +D +++ + A P ++TQ + + +VFIGGL T E +K +F +
Sbjct 106 REHELDGKKIDPKVAFP----KRTQAKL----VTKTKKVFIGGLSATSTLEDMKQYFETY 157
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEAKRAQPRTQGPR 183
G++ A +M D+ T R RGFGF+ + + E A+K I H+ G E K+AQP+
Sbjct 158 GKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE---- 213
Query 184 MRMLAMGGPMGMPSPYRMEDPRYAVARTGYG 214
ML P ++ R A AR YG
Sbjct 214 -VML----------PVQLNKSRAAAARNLYG 233
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+K+F+GGL+ +T E +++YF ++G V ++FDK T R RGFGFVTF+ E + V +
Sbjct 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDRDPA 98
H H I+ VE ++A P+E Q + R A
Sbjct 194 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAA 227
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query 83 REEARQTQPRRD-RDPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNR 141
EEAR D +++ G++FIGGL T E L+D+F RFGE+ VM D T R
Sbjct 25 HEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKR 84
Query 142 PRGFGFIIYKNPEDAEKALGI--HKDLGPNAEAKRAQP-RTQG 181
RGFGFI + +P +K L H+ G + K A P RTQ
Sbjct 85 ARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQA 127
> dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d08,
wu:fi32d12, wu:fi47b09; musashi homolog 2a (Drosophila);
K14411 RNA-binding protein Musashi
Length=388
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ T+ +SLR+YF FG + V+ D T RSRGFGF+TF + +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
HH +D ++ + A P R+ QP+ + ++F+GGL E +K +F +F
Sbjct 82 PHHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSASTVVEDVKQYFEQF 133
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++N + EK IH N E K+AQP+
Sbjct 134 GKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ +T E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query 66 RH-HTIDESQVEVRRAIPRE 84
H H I+ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query 85 EARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRG 144
+A Q D + G++FIGGL + + L+D+F +FGE+ VM D T R RG
Sbjct 4 DASQVTSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRG 63
Query 145 FGFIIYKNPEDAEKALGI-HKDL-GPNAEAKRAQPRTQGPRM 184
FGFI + + +K L H +L + K A PR P+M
Sbjct 64 FGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKM 105
> ath:AT4G26650 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=452
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
L K+F+GG++ +T E L+EYF +G + ++ D+ TGR+RGFGF+ F +P V+
Sbjct 11 LGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI 70
Query 65 DRHHTIDESQVEVRRAIPREE----ARQTQPRRDRDPAE--NSG-----RVFIGGLGDDV 113
H ID VE ++A+PR++ R P P+ N G ++F+GGL +
Sbjct 71 MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSI 130
Query 114 TDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAE 171
T+ K++F +FG + VM D T RPRGFGFI + + E + L H+ G E
Sbjct 131 TEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVE 190
Query 172 AKRAQPR 178
KRA P+
Sbjct 191 VKRAVPK 197
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL + T + YF FG + V++D T R RGFGF+TF+ E+++ V+
Sbjct 119 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 178
Query 66 R-HHTIDESQVEVRRAIPREEARQTQPR 92
+ H ++ VEV+RA+P+E + T R
Sbjct 179 KTFHELNGKMVEVKRAVPKELSSTTPNR 206
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
+ A + G++FIGG+ D +E L+++F ++G+L A +M DR T R RGFGFI++ +P
Sbjct 6 ESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSV 65
Query 156 AEKA-LGIHKDLGPNAEAKRAQPRTQGPRMRMLAMGGPMGMPSP 198
AE+ + H G EAK+A PR ++ A PM + SP
Sbjct 66 AERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHA--SPMHLISP 107
> ath:AT3G13224 RNA recognition motif (RRM)-containing protein
Length=358
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 109/176 (61%), Gaps = 11/176 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIF+GGL+++TT ++F +G + + ++ D+ TG+ RGFGF+TF +P ++ V++
Sbjct 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query 67 HHTIDESQVEVRRAIPR-EEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H I+ QVE++R IP+ Q++ + + ++F+GG+ VT++ LKDFF+++
Sbjct 80 THVINGKQVEIKRTIPKGAGGNQSKDIKTK-------KIFVGGIPSTVTEDELKDFFAKY 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLG-PNAEAKRAQPR 178
G + V+ D ETNR RGFGF+I+ + E ++ L G D+ E K+A+P+
Sbjct 133 GNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPK 188
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGG+ T + L+++F+ +G V +V+ D T RSRGFGFV F+ E ++ ++
Sbjct 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS 168
Query 66 RHHTID--ESQVEVRRAIPREEARQTQP 91
+ + ID ++QVE+++A P++ ++ P
Sbjct 169 KGNMIDMADTQVEIKKAEPKKSLNRSPP 196
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query 102 GRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL- 160
G++FIGGL D T+ V F ++GE+T + +M DR T +PRGFGFI + +P +K +
Sbjct 19 GKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIE 78
Query 161 GIHKDLGPNAEAKRAQPRTQG 181
H G E KR P+ G
Sbjct 79 DTHVINGKQVEIKRTIPKGAG 99
> xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi homolog
2; K14411 RNA-binding protein Musashi
Length=406
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 105/175 (60%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ T+ +SLR+YF+ FG + V+ D T RSRGFGFVTF +P +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query 67 -HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
HH +D ++ + A P R+ QP+ + ++F+GGL + E +K +F ++
Sbjct 82 PHHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSANTVVEDVKQYFEQY 133
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ ++ + EK IH N E K+AQP+
Sbjct 134 GKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NT E +++YF +G V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query 66 RH-HTIDESQVEVRRAIPRE 84
H H I+ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + G++FIGGL + + L+D+F++FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 156 AEKALG-IHKDL-GPNAEAKRAQPRTQGPRM 184
+K L H +L + K A PR P+M
Sbjct 75 VDKVLAQPHHELDSKTIDPKVAFPRRAQPKM 105
> hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-binding
protein Musashi
Length=362
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ TT E LREYF FG V V+ D LT RSRGFGFVTF + ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query 67 H-HTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H +D ++ + A P R+ QP+ + ++F+GGL + T E +K +F +F
Sbjct 81 SRHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ +++ + EK IH N E K+AQP+
Sbjct 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E +++YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDR 95
H H I+ VE ++A P+E T R R
Sbjct 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + ++FIGGL T E L+++F +FGE+ VM D T R RGFGF+ + +
Sbjct 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 156 AEKALGI--HKDLGPNAEAKRAQPRTQGPRM 184
+K L H+ + K A PR P+M
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKM 104
> mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Drosophila);
K14411 RNA-binding protein Musashi
Length=362
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+F+GGL+ TT E LREYF FG V V+ D LT RSRGFGFVTF + ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query 67 H-HTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
H +D ++ + A P R+ QP+ + ++F+GGL + T E +K +F +F
Sbjct 81 SRHELDSKTIDPKVAFP----RRAQPKM----VTRTKKIFVGGLSVNTTVEDVKHYFEQF 132
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN--AEAKRAQPR 178
G++ A +M D+ TNR RGFGF+ +++ + EK IH N E K+AQP+
Sbjct 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E ++ YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query 66 RH-HTIDESQVEVRRAIPREEARQTQPRRDR 95
H H I+ VE ++A P+E T R R
Sbjct 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query 96 DPAENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPED 155
D + ++FIGGL T E L+++F +FGE+ VM D T R RGFGF+ + +
Sbjct 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 156 AEKALGI--HKDLGPNAEAKRAQPRTQGPRM 184
+K L H+ + K A PR P+M
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKM 104
> cpv:cgd5_700 musashi. RRM domain containing protein, splicing
related
Length=507
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 145/322 (45%), Gaps = 75/322 (23%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIF GGL+ TT SLR +FS +G + + VL +K TGRSRGFGF+TF E+++ V+
Sbjct 24 KIFCGGLSDVTTNASLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAVLSS 83
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAE------------------NSG------ 102
+D +++ +RA+PR + + D NSG
Sbjct 84 PQIVDGKEIDCKRAVPRGVIQANEADESADSNNQASNNSGNTNANNANISGNSGSNTANS 143
Query 103 -----------------------RVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRET 139
++F+GGL TDE L++ F ++G + + +VMVDR+T
Sbjct 144 NSNVTGRSHIGGAGGSSGGFSATKIFVGGLPQSCTDEKLREHFGKYGTIKNLSVMVDRDT 203
Query 140 NRPRGFGFIIYKNPEDAEKALGI---HKDLGPNAEAKRAQPR--TQGPRMRMLAMGGPMG 194
NR RGFGF+ Y++P+ E+ + H+ E K+A PR G + + G
Sbjct 204 NRHRGFGFVEYESPDAVEEVMRHYYDHQIDNKWVECKKALPREIMAGNSNQSNSGGHAPS 263
Query 195 MPSPYRMEDPRYAVARTGYGG--------------AGGAPA-QLYGGYN-----YAYHPY 234
+ +P +P A A T AGG P+ Q+YG Y Y Y Y
Sbjct 264 LGNPRVRTNPALAAASTTANSNYADYYRNPYLPVHAGGVPSQQIYGRYGRHDPRYMYTGY 323
Query 235 YAAYYAQMAAAYGGGGYGGYSP 256
+ Y + + Y GGYG +P
Sbjct 324 ASGYSSNI---YATGGYGQIAP 342
> xla:447602 MGC84815 protein
Length=291
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 115/200 (57%), Gaps = 18/200 (9%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNV-V 64
+K+FVGGLN T +SLR Y+S +G + V+ D + +SRGFGFVTF+E +++
Sbjct 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query 65 DRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSR 124
DR H +D V+ +RA+PREE T P + ++F+GGL DVT+E L ++F +
Sbjct 73 DRPHKVDGKDVDSKRAMPREE---TSP----EVHAAVKKIFVGGLKKDVTNEDLAEYFGK 125
Query 125 FGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGI--HKDLGPNAEAKRAQPRTQGP 182
FG +T A+++V ++TN RGF F+ + + + +K + H G A+ ++A R +
Sbjct 126 FGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSREELR 185
Query 183 RMRMLAMGGPMGMPSPYRME 202
+++ P P RM+
Sbjct 186 KVQT--------KPPPARMD 197
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
++KIFVGGL ++ T E L EYF FG V ++ K T SRGF FVTF++ ++++ V+
Sbjct 102 VKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVI 161
Query 65 -DRHHTIDESQVEVRRAIPREEAR--QTQP---RRDRDPAENSG 102
R H I + +VR+A+ REE R QT+P R D + + N G
Sbjct 162 LARPHMIGGHKADVRKALSREELRKVQTKPPPARMDYNSSWNEG 205
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query 96 DP-AENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPE 154
DP A+ ++F+GGL ++ L+ ++S++GE+T VM D +N+ RGFGF+ +K
Sbjct 6 DPKADQDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAS 65
Query 155 DAEKALGI--HKDLGPNAEAKRAQPRTQ 180
+KA HK G + ++KRA PR +
Sbjct 66 SVDKAQADRPHKVDGKDVDSKRAMPREE 93
> dre:323529 fc01g05, wu:fc01g05; zgc:77366
Length=305
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
Query 2 ERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETIN 61
E L K+FVGGLN TT + LR +F +G + V+ ++ RSR FGFVT+ P+ +
Sbjct 6 ENQLCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEAD 65
Query 62 NVVD-RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKD 120
+ + R H +D + VE++RA+ RE+A + + ++FIGGL DD+ ++ L+D
Sbjct 66 SAMSARPHILDGNNVELKRAVAREDAGKPEA------LAKVKKIFIGGLKDDIEEDHLRD 119
Query 121 FFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKA--LGIHKDLGPNAEAKRAQPR 178
FS+FG + A V+ D+ET + RGFGF+ +++ + A+KA L H G E K+A +
Sbjct 120 CFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTK 179
Query 179 TQ 180
+
Sbjct 180 QE 181
> dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08,
zgc:77280; heterogeneous nuclear ribonucleoprotein A0; K12894
heterogeneous nuclear ribonucleoprotein A0
Length=314
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E L K+FVGGLN TT + LR YF FG + V+ + RSR FGFVT+ E
Sbjct 3 EMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEA 62
Query 61 NNVVD-RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
+ + R H +D VEV+RA+ RE+A + + ++F+GGL DD+ ++ L
Sbjct 63 DAAMAARPHVVDGKNVEVKRAVAREDAGRPEA------LAKVKKIFVGGLKDDIEEKDLT 116
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKA--LGIHKDLGPNAEAKRAQP 177
+FFS+FG + + V+ D++T + RGFGF+ +++ + A+KA L H G E K+A
Sbjct 117 EFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALT 176
Query 178 RTQ 180
+ +
Sbjct 177 KQE 179
> ath:AT1G17640 RNA recognition motif (RRM)-containing protein
Length=369
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+FVGG++ TTAE+ YF FG V + ++ D++TG RGFGFVTF + V++
Sbjct 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126
H ID+ +V+++R +PR + D + ++F+GGL + ++ LK++F +G
Sbjct 127 DHVIDDRKVDLKRTLPRGDKDT-----DIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYG 181
Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALG---IHKDLGPNAEAKRAQPRTQG 181
++ +M D T R RGFGF+ ++ + ++ +H+ E KRA+P+ G
Sbjct 182 DIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTG 239
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
RKIFVGGL + L+ YF +G + ++++D TGRSRGFGFVTF+ ++++ +
Sbjct 157 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFS 216
Query 66 --RHHTIDESQVEVRRAIPREEARQTQPR 92
+ H + + QVE++RA P+ R R
Sbjct 217 DGKVHELGDKQVEIKRAEPKRTGRDNSFR 245
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query 102 GRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL- 160
G++F+GG+ + T E ++F +FGE+ + +M DR T PRGFGF+ + + AEK L
Sbjct 66 GKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 125
Query 161 GIHKDLGPNAEAKRAQPR 178
H + KR PR
Sbjct 126 EDHVIDDRKVDLKRTLPR 143
> cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1);
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=346
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 102/161 (63%), Gaps = 7/161 (4%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFE-EPET 59
E LRKIFVGGL NTT + +RE++S FG + V+ D T RSRGFGFVTF + E
Sbjct 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query 60 INNVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
+ R H ID V+ +RA+PR++ +++ ++ R+++ G+ +D T+++L
Sbjct 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESN------VSTKRLYVSGVREDHTEDMLT 131
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL 160
++F+++G +T + +++D+ T +PRGFGF+ + + + ++ +
Sbjct 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
> ath:AT5G40490 RNA recognition motif (RRM)-containing protein;
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=423
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 11/175 (6%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIFVGGL R TT+ ++F +G + + ++ D+ TG+ RGFGFVT+ + ++ V+
Sbjct 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126
+H I QVE++R IPR + + ++F+GG+ V D+ K+FF +FG
Sbjct 103 NHIIIGKQVEIKRTIPRGSMSSNDFK--------TKKIFVGGIPSSVDDDEFKEFFMQFG 154
Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDL---GPNAEAKRAQPR 178
EL +M D T R RGFGF+ Y++ + + L + G E K+A+P+
Sbjct 155 ELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPK 209
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGG+ + + +E+F FG + +++ D TGRSRGFGFVT+E + +++++
Sbjct 130 KKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query 66 RHHTIDES--QVEVRRAIPREEARQTQPRR 93
+ + I+ S QVE+++A P++ T P +
Sbjct 190 KGNRIELSGTQVEIKKAEPKKPNSVTTPSK 219
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query 98 AENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAE 157
+++G++F+GGL + T F ++GE+T + +M DR+T +PRGFGF+ Y + +
Sbjct 38 VDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVD 97
Query 158 KAL-GIHKDLGPNAEAKRAQPR 178
K + H +G E KR PR
Sbjct 98 KVIQDNHIIIGKQVEIKRTIPR 119
> mmu:11991 Hnrnpd, Auf1, C230004L04, Hnrpd; heterogeneous nuclear
ribonucleoprotein D; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=355
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 99/160 (61%), Gaps = 13/160 (8%)
Query 2 ERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETIN 61
+R K+F+GGL+ +TT + L++YFS FG V + D +TGRSRGFGFV F+E E+++
Sbjct 93 QREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVD 152
Query 62 NVVD-RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKD 120
V+D + H ++ ++ +RA + + ++P + ++F+GGL D +E +++
Sbjct 153 KVMDQKEHKLNGKVIDPKRA---------KAMKTKEPVK---KIFVGGLSPDTPEEKIRE 200
Query 121 FFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL 160
+F FGE+ S + +D +TN+ RGF FI +K E +K +
Sbjct 201 YFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
++KIFVGGL+ +T E +REYF FG V E+ D T + RGF F+TF+E E + ++
Sbjct 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query 65 D-RHHTIDESQVEVRRAIPRE 84
+ ++H + S+ E++ A+ +E
Sbjct 241 EKKYHNVGLSKCEIKVAMSKE 261
> cpv:cgd5_3270 RNA recognition motif (RRM)-containing protein
Length=202
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 21/192 (10%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
KIFVGGL++ T+ L EYF FG + V++D ++GRSRGFGFVTF++P+T+ V +
Sbjct 9 KIFVGGLSQQVTSSILMEYFLQFGVILDAVVMYDNVSGRSRGFGFVTFKDPKTVEIVQNI 68
Query 67 H-HTIDESQVEVRRAIPR------EEARQTQPRRDRDP----------AENSGRVFIGGL 109
H I V+ +RA PR +E + + + P +N ++F+GGL
Sbjct 69 TPHIIMGKVVDCKRASPRNTNLMIKEYFEDITKNENTPENYNNAVTKGIKNVSKIFVGGL 128
Query 110 GDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPE---DAEKALGIHKDL 166
D+T E K +F RFG + A ++ D+ RPRGFGF+ +++ + + K H
Sbjct 129 -PDLTLEEFKIYFQRFGNIKDAVLITDKNNGRPRGFGFVTFESVDAVNNVTKFYSNHYLK 187
Query 167 GPNAEAKRAQPR 178
G E KRA PR
Sbjct 188 GKWVECKRALPR 199
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query 101 SGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL 160
SG++F+GGL VT +L ++F +FG + A VM D + R RGFGF+ +K+P+ E
Sbjct 7 SGKIFVGGLSQQVTSSILMEYFLQFGVILDAVVMYDNVSGRSRGFGFVTFKDPKTVEIVQ 66
Query 161 GI--HKDLGPNAEAKRAQPRTQGPRMR 185
I H +G + KRA PR ++
Sbjct 67 NITPHIIMGKVVDCKRASPRNTNLMIK 93
> ath:AT1G58470 ATRBP1; ATRBP1 (ARABIDOPSIS THALIANA RNA-BINDING
PROTEIN 1); RNA binding / single-stranded RNA binding; K14411
RNA-binding protein Musashi
Length=360
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 28/261 (10%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66
K+FVGG+ + T+ E+L++YFS +G V V +K+TG+ RGFGFV F + +
Sbjct 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query 67 HHTIDESQVEVRRAIPREEARQTQPRR----DRDPAENSG---------------RVFIG 107
H I V+VR+AI + E Q QP +R + +G ++F+G
Sbjct 67 THFILGKPVDVRKAIRKHELYQ-QPFSMQFLERKVQQMNGGLREMSSNGVTSRTKKIFVG 125
Query 108 GLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKD 165
GL + T+E K +F RFG T VM D TNRPRGFGF+ Y + + E + H+
Sbjct 126 GLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHEL 185
Query 166 LGPNAEAKRAQPRTQGPRMRMLAMGGPMGMPSPYRMEDPRYAVARTGYGGAGGAPAQLYG 225
E KRA P+ A+ P PS + Y + GYG P ++G
Sbjct 186 SDKRVEVKRAIPKEGIQSNNGNAVNIP---PSYSSFQATPYVPEQNGYGMVLQFPPPVFG 242
Query 226 GYN---YAYHPYYAAYYAQMA 243
++ +PY + AQ+A
Sbjct 243 YHHNVQAVQYPYGYQFTAQVA 263
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+KIFVGGL+ NTT E + YF FG V+ D +T R RGFGFVT++ +++ V+
Sbjct 120 KKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQ 179
Query 66 RH-HTIDESQVEVRRAIPRE 84
+ H + + +VEV+RAIP+E
Sbjct 180 SNFHELSDKRVEVKRAIPKE 199
> hsa:3184 HNRNPD, AUF1, AUF1A, HNRPD, P37, hnRNPD0; heterogeneous
nuclear ribonucleoprotein D (AU-rich element RNA binding
protein 1, 37kDa); K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=287
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 97/155 (62%), Gaps = 13/155 (8%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD- 65
K+F+GGL+ +TT + L++YFS FG V + D +TGRSRGFGFV F+E E+++ V+D
Sbjct 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H ++ ++ +RA + + ++P + ++F+GGL D +E ++++F F
Sbjct 139 KEHKLNGKVIDPKRA---------KAMKTKEPVK---KIFVGGLSPDTPEEKIREYFGGF 186
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL 160
GE+ S + +D +TN+ RGF FI +K E +K +
Sbjct 187 GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 221
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
++KIFVGGL+ +T E +REYF FG V E+ D T + RGF F+TF+E E + ++
Sbjct 162 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 221
Query 65 D-RHHTIDESQVEVRRAIPRE 84
+ ++H + S+ E++ A+ +E
Sbjct 222 EKKYHNVGLSKCEIKVAMSKE 242
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E+ G++FIGGL D T + LKD+FS+FGE+ + +D T R RGFGF+++K E +K
Sbjct 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query 159 ALGI--HKDLGPNAEAKRAQPRTQGPRMRMLAMGG 191
+ HK G + KRA+ ++ + +GG
Sbjct 135 VMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGG 169
> dre:406594 fd36h02, wu:fd36h02; zgc:77052
Length=309
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 16/175 (9%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV-D 65
K+FVGGL+ +T+ + L++YFS FG V + D TGRSRGFGF+ F+E ++++ V+
Sbjct 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H +D Q++ +RA+ A + +P + ++F+GGL + T+E ++++F F
Sbjct 106 KEHRLDGRQIDPKRAM----AIKKEPVK---------KIFVGGLNPETTEEKIREYFGSF 152
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQPR 178
GE+ + + D +T++ RGF FI +K +K L H G E K AQP+
Sbjct 153 GEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIAQPK 207
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query 5 LRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVV 64
++KIFVGGLN TT E +REYF SFG + E+ D T + RGF F+TF+E + ++
Sbjct 128 VKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKIL 187
Query 65 D-RHHTIDESQVEVRRAIPREEARQTQ 90
+ ++H + S+ E++ A P+E +Q Q
Sbjct 188 EKKYHNVCGSKCEIKIAQPKEIYQQQQ 214
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E++G++F+GGL D + + LKD+FS+FGE+ + +D T R RGFGFI++K + ++
Sbjct 42 EDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDR 101
Query 159 ALGI--HKDLGPNAEAKRAQPRTQGPRMRMLAMG 190
L H+ G + KRA + P ++ G
Sbjct 102 VLQQKEHRLDGRQIDPKRAMAIKKEPVKKIFVGG 135
> dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleoprotein
A1; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=422
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E LRK+F+GGL+ TT +SLR +F +G + V+ D T RSRGFGFVT+ + +
Sbjct 28 EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEV 87
Query 61 NNVVD-RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
N +D R H +D VE +RA+ RE++ ++P ++F+GG+ DD + L+
Sbjct 88 NASMDARPHKVDGRLVEPKRAVSREDS--SKPF----AHTTVKKIFVGGIKDDTEENHLR 141
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQP 177
D+F +FG++ +MVD +T RGF F+ + + + ++ + H G N E ++A
Sbjct 142 DYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALS 201
Query 178 RTQ 180
+ +
Sbjct 202 KQE 204
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINN- 62
T++KIFVGG+ +T LR+YF FG + E++ D TG RGF FVTF++ ++++
Sbjct 122 TVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRI 181
Query 63 VVDRHHTIDESQVEVRRAIPREEARQT 89
V+ ++HT++ EVR+A+ ++E T
Sbjct 182 VIQKYHTVNGHNCEVRKALSKQEMANT 208
> mmu:15384 Hnrnpab, 3010025C11Rik, CBF-A, Cgbfa, Hnrpab; heterogeneous
nuclear ribonucleoprotein A/B; K13044 heterogeneous
nuclear ribonucleoprotein A/B/D
Length=332
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 103/175 (58%), Gaps = 16/175 (9%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD- 65
K+FVGGL+ +T+ + L++YF+ FG V + D TGRSRGFGF+ F++ ++ V+D
Sbjct 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H +D ++ ++A+ + +DP + ++F+GGL + T+E ++++F +F
Sbjct 136 KEHRLDGRVIDPKKAMAMK----------KDPVK---KIFVGGLNPEATEEKIREYFGQF 182
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQPR 178
GE+ + + +D + N+ RGF FI +K + +K L H G E K AQP+
Sbjct 183 GEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E++G++F+GGL D + + LKD+F++FGE+ + +D T R RGFGFI++K+ EK
Sbjct 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Query 159 ALGI--HKDLGPNAEAKRAQPRTQGPRMRMLAMG 190
L H+ G + K+A + P ++ G
Sbjct 132 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 165
> mmu:545592 Gm11847, OTTMUSG00000004599; heterogeneous nuclear
ribonucleoprotein A3 pseudogene; K12741 heterogeneous nuclear
ribonucleoprotein A1/A3
Length=362
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 102/178 (57%), Gaps = 9/178 (5%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E LRK+F+GGL+ TT +SLRE+F +G + V+ D T RSRGFGFVT+ E +
Sbjct 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query 61 N-NVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
+ + R H +D VE +RA+ RE++ + ++F+GG+ +D + L+
Sbjct 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHL------TVKKIFVGGIKEDTEEYNLR 143
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRA 175
D+F ++G++ + VM DR++ + RGF F+ + + + +K + H G N E K+A
Sbjct 144 DYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINN- 62
T++KIFVGG+ +T +LR+YF +G + EV+ D+ +G+ RGF FVTF++ +T++
Sbjct 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query 63 VVDRHHTIDESQVEVRRAIPREEAR 87
VV ++HTI+ EV++A+ ++E +
Sbjct 184 VVQKYHTINGHNCEVKKALSKQEMQ 208
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E ++FIGGL + TD+ L++ F ++G LT VM D +T R RGFGF+ Y E+ +
Sbjct 32 EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 91
Query 159 ALGI--HKDLGPNAEAKRAQPR 178
A+ HK G E KRA R
Sbjct 92 AMCARPHKVDGRVVEPKRAVSR 113
> hsa:3182 HNRNPAB, ABBP1, FLJ40338, HNRPAB; heterogeneous nuclear
ribonucleoprotein A/B; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=285
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 102/175 (58%), Gaps = 16/175 (9%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD- 65
K+FVGGL+ +T+ + L++YF+ FG V + D TGRSRGFGF+ F++ ++ V+D
Sbjct 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H +D ++ ++A+ + +DP + ++F+GGL + T+E ++++F F
Sbjct 131 KEHRLDGRVIDPKKAMAMK----------KDPVK---KIFVGGLNPEATEEKIREYFGEF 177
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQPR 178
GE+ + + +D + N+ RGF FI +K E +K L H G E K AQP+
Sbjct 178 GEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E++G++F+GGL D + + LKD+F++FGE+ + +D T R RGFGFI++K+ EK
Sbjct 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Query 159 ALGI--HKDLGPNAEAKRAQPRTQGPRMRMLAMG 190
L H+ G + K+A + P ++ G
Sbjct 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
> mmu:100505153 heterogeneous nuclear ribonucleoprotein A3-like
Length=350
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E LRK+F+GGL+ TT +SLRE+F +G + V+ D T RSRGFGFVT+ E +
Sbjct 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query 61 N-NVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLK 119
+ + R H ID VE +RA+ RE++ + ++F+GG+ +D + L+
Sbjct 68 DAAMCARPHKIDGRVVEPKRAVSREDSVKPGAHL------TVKKIFVGGIKEDTEEYNLR 121
Query 120 DFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRAQP 177
D+F ++G++ + VM DR++ + RGF F+ + + + +K + H G N E K+A
Sbjct 122 DYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALS 181
Query 178 RTQ 180
+ +
Sbjct 182 KQE 184
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINN- 62
T++KIFVGG+ +T +LR+YF +G + EV+ D+ +G+ RGF FVTF++ +T++
Sbjct 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query 63 VVDRHHTIDESQVEVRRAIPREEAR 87
VV ++HTI+ EV++A+ ++E +
Sbjct 162 VVQKYHTINGHNCEVKKALSKQEMQ 186
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
E ++FIGGL + TD+ L++ F ++G LT VM D +T R RGFGF+ Y E+ +
Sbjct 10 EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 69
Query 159 ALGI--HKDLGPNAEAKRAQPRTQGPR------MRMLAMGGPMGMPSPYRMED 203
A+ HK G E KRA R + ++ + +GG Y + D
Sbjct 70 AMCARPHKIDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
> mmu:50926 Hnrpdl, AA407431, AA959857, D5Ertd650e, D5Wsu145e,
JKTBP, hnRNP_DL, hnRNP-DL; heterogeneous nuclear ribonucleoprotein
D-like; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=420
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 102/175 (58%), Gaps = 15/175 (8%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD- 65
K+F+GGL+ +T+ + L EY S FG V + D +TGRSRGFGFV F++ +++ V++
Sbjct 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H +D ++ +RA + + ++P + +VF+GGL D ++E +K++F F
Sbjct 209 KEHKLDGKLIDPKRA---------KALKGKEPPK---KVFVGGLSPDTSEEQIKEYFGAF 256
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALG--IHKDLGPNAEAKRAQPR 178
GE+ + + +D +TN RGF FI Y + E +K L H+ E K AQP+
Sbjct 257 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+K+FVGGL+ +T+ E ++EYF +FG + + E+ D T RGF F+T+ + E + +++
Sbjct 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query 66 -RHHTIDESQVEVRRAIPREEAR 87
R+H I + E++ A P+E R
Sbjct 293 SRYHQIGSGKCEIKVAQPKEVYR 315
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
++ G++FIGGL D + + L ++ SRFGE+ + D T R RGFGF+++K+ +K
Sbjct 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query 159 ALGI--HKDLGPNAEAKRAQ 176
L + HK G + KRA+
Sbjct 205 VLELKEHKLDGKLIDPKRAK 224
> hsa:9987 HNRPDL, HNRNP, JKTBP, JKTBP2, laAUF1; heterogeneous
nuclear ribonucleoprotein D-like; K13044 heterogeneous nuclear
ribonucleoprotein A/B/D
Length=420
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 102/175 (58%), Gaps = 15/175 (8%)
Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD- 65
K+F+GGL+ +T+ + L EY S FG V + D +TGRSRGFGFV F++ +++ V++
Sbjct 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query 66 RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRF 125
+ H +D ++ +RA + + ++P + +VF+GGL D ++E +K++F F
Sbjct 209 KEHKLDGKLIDPKRA---------KALKGKEPPK---KVFVGGLSPDTSEEQIKEYFGAF 256
Query 126 GELTSANVMVDRETNRPRGFGFIIYKNPEDAEKALG--IHKDLGPNAEAKRAQPR 178
GE+ + + +D +TN RGF FI Y + E +K L H+ E K AQP+
Sbjct 257 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query 6 RKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVD 65
+K+FVGGL+ +T+ E ++EYF +FG + + E+ D T RGF F+T+ + E + +++
Sbjct 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query 66 -RHHTIDESQVEVRRAIPREEAR 87
R+H I + E++ A P+E R
Sbjct 293 SRYHQIGSGKCEIKVAQPKEVYR 315
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query 99 ENSGRVFIGGLGDDVTDEVLKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEK 158
++ G++FIGGL D + + L ++ SRFGE+ + D T R RGFGF+++K+ +K
Sbjct 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query 159 ALGI--HKDLGPNAEAKRAQ 176
L + HK G + KRA+
Sbjct 205 VLELKEHKLDGKLIDPKRAK 224
> mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;
heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 106/185 (57%), Gaps = 13/185 (7%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E+ RK+F+GGL+ TT ESLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query 61 N-NVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAEN--SGRVFIGGLGDDVTDEV 117
+ + R H+ID VE +RA+ REE+ + P + ++F+GG+ +D +
Sbjct 64 DAAMAARPHSIDGRVVEPKRAVAREESGK--------PGAHVTVKKLFVGGIKEDTEEHH 115
Query 118 LKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRA 175
L+D+F +G++ + ++ DR++ + RGFGF+ + + + +K + H G NAE ++A
Sbjct 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Query 176 QPRTQ 180
R +
Sbjct 176 LSRQE 180
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNV 63
T++K+FVGG+ +T LR+YF +G + E++ D+ +G+ RGFGFVTF++ + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 64 V-DRHHTIDESQVEVRRAIPREEARQTQPRR 93
V ++HTI+ EVR+A+ R+E ++ Q R
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-like;
K13158 heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 106/185 (57%), Gaps = 13/185 (7%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E+ RK+F+GGL+ TT ESLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query 61 N-NVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAEN--SGRVFIGGLGDDVTDEV 117
+ + R H+ID VE +RA+ REE+ + P + ++F+GG+ +D +
Sbjct 64 DAAMAARPHSIDGRVVEPKRAVAREESGK--------PGAHVTVKKLFVGGIKEDTEEHH 115
Query 118 LKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRA 175
L+D+F +G++ + ++ DR++ + RGFGF+ + + + +K + H G NAE ++A
Sbjct 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Query 176 QPRTQ 180
R +
Sbjct 176 LSRQE 180
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNV 63
T++K+FVGG+ +T LR+YF +G + E++ D+ +G+ RGFGFVTF++ + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 64 V-DRHHTIDESQVEVRRAIPREEARQTQPRR 93
V ++HTI+ EVR+A+ R+E ++ Q R
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,
HNRPA2, HNRPA2B1, HNRPB1, RNPA2, SNRPB1; heterogeneous nuclear
ribonucleoprotein A2/B1; K13158 heterogeneous nuclear
ribonucleoprotein A2/B1
Length=341
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 106/185 (57%), Gaps = 13/185 (7%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E+ RK+F+GGL+ TT ESLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query 61 N-NVVDRHHTIDESQVEVRRAIPREEARQTQPRRDRDPAEN--SGRVFIGGLGDDVTDEV 117
+ + R H+ID VE +RA+ REE+ + P + ++F+GG+ +D +
Sbjct 64 DAAMAARPHSIDGRVVEPKRAVAREESGK--------PGAHVTVKKLFVGGIKEDTEEHH 115
Query 118 LKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRA 175
L+D+F +G++ + ++ DR++ + RGFGF+ + + + +K + H G NAE ++A
Sbjct 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Query 176 QPRTQ 180
R +
Sbjct 176 LSRQE 180
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query 4 TLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNV 63
T++K+FVGG+ +T LR+YF +G + E++ D+ +G+ RGFGFVTF++ + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 64 V-DRHHTIDESQVEVRRAIPREEARQTQPRR 93
V ++HTI+ EVR+A+ R+E ++ Q R
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear
ribonucleoprotein A1/A3
Length=388
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 109/191 (57%), Gaps = 13/191 (6%)
Query 1 EERTLRKIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETI 60
E LRK+F+GGL+ TT ESLR +F +G + V+ D T RSRGFGFVT+ +
Sbjct 10 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEV 69
Query 61 NNVVD-RHHTIDESQVEVRRAIPREEARQTQPRRDRDPAENS--GRVFIGGLGDDVTDEV 117
+ +D R H +D VE +RA+ RE++ + P +S ++F+GG+ +D +E
Sbjct 70 DAAMDARPHKVDGRAVEPKRAVSREDSSK--------PGAHSTVKKMFVGGIKEDTDEEH 121
Query 118 LKDFFSRFGELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL--GIHKDLGPNAEAKRA 175
L+++F +FG++ N+M ++ +++ RGF FI + + + ++ + H G N E ++A
Sbjct 122 LREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKA 181
Query 176 QPRTQGPRMRM 186
R R+ M
Sbjct 182 LSREGMNRVSM 192
Lambda K H
0.316 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 10592847112
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40