bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0320_orf1 Length=194 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_022860 eukaryotic translation initiation factor 3 s... 224 1e-58 pfa:PFE0885w eukaryotictranslation initiation factor 3 subunit... 156 4e-38 tpv:TP04_0268 hypothetical protein; K03253 translation initiat... 134 2e-31 cpv:cgd2_360 prtip-like IF39 eukaryotic translation initiation... 131 1e-30 bbo:BBOV_II003250 18.m06273; eukaryotic translation initiation... 120 2e-27 hsa:8662 EIF3B, EIF3-ETA, EIF3-P110, EIF3-P116, EIF3S9, MGC104... 85.9 8e-17 mmu:27979 Eif3b, AL033316, AL033334, AL033369, AW208965, D5Wsu... 85.5 9e-17 xla:735075 eif3b, MGC99017, eIF-3-eta; eukaryotic translation ... 85.5 1e-16 cel:Y54E2A.11 eif-3.B; Eukaryotic Initiation Factor family mem... 83.2 5e-16 dre:796380 eif3b, eif3s9, wu:fc17c01; eukaryotic translation i... 80.9 3e-15 ath:AT5G25780 EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTO... 71.6 1e-12 ath:AT5G27640 TIF3B1; TIF3B1 (TRANSLATION INITIATION FACTOR 3B... 70.9 3e-12 sce:YOR361C PRT1, CDC63, DNA26; Prt1p; K03253 translation init... 64.3 3e-10 ath:AT5G13480 FY; FY; protein binding 35.8 0.093 sce:YMR146C TIF34; Tif34p; K03246 translation initiation facto... 34.3 0.25 sce:YGR054W Eukaryotic initiation factor (eIF) 2A; associates ... 34.3 0.27 mmu:67337 Cstf1, 1700057K18Rik, AI788832; cleavage stimulation... 33.9 0.32 xla:447785 cstf1, MGC83790; cleavage stimulation factor, 3' pr... 33.9 0.37 bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containi... 33.1 0.64 xla:380171 cstf1, MGC53063; cleavage stimulation factor, 3' pr... 32.7 0.84 ath:AT1G04510 transducin family protein / WD-40 repeat family ... 32.7 0.89 cel:E04D5.1 hypothetical protein; K15026 translation initiatio... 32.3 1.1 dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin ... 31.6 1.6 cel:C18E3.5 hypothetical protein 31.2 2.2 hsa:1477 CSTF1, CstF-50, CstFp50; cleavage stimulation factor,... 30.8 2.8 xla:444261 apaf1, MGC80868, apaf-1; apoptotic peptidase activa... 30.8 3.3 ath:AT5G42010 WD-40 repeat family protein 30.4 3.5 tgo:TGME49_085660 DEAD/DEAH box helicase domain-containing pro... 30.0 4.9 mmu:11783 Apaf1, 6230400I06Rik, Apaf-1, Apaf1l, KIAA0413, fog,... 30.0 5.8 ath:AT5G05310 hypothetical protein 29.6 7.6 ath:AT1G73720 transducin family protein / WD-40 repeat family ... 29.3 9.3 > tgo:TGME49_022860 eukaryotic translation initiation factor 3 subunit 9, putative ; K03253 translation initiation factor 3 subunit B Length=756 Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/179 (59%), Positives = 134/179 (74%), Gaps = 7/179 (3%) Query 4 RKSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKE 63 R+ +R + R QWSPQGSFLATFHR GI+LWAG FEKK R EHK+VKQI FSP E Sbjct 219 RERADGKRVWTDFRVQWSPQGSFLATFHRPGIALWAGDQFEKKVRFEHKDVKQIDFSPNE 278 Query 64 TYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKI 123 TY+++WDG+PA +RNEKA + W VMTGE+LRQF TPA +PRG E+PHFLFSHD++Y+A++ Sbjct 279 TYVITWDGSPAQLRNEKAVRIWKVMTGELLRQFPTPAYSPRGGEYPHFLFSHDDRYVARM 338 Query 124 GDKELCIYAMDPKD------NFPDQAADEDVTPVKLLRDEK-GHFSALKYPVEKFEWSP 175 G+KELC+Y M+ D D+ +D V+LLRD + G S+LKYP+EKFEWSP Sbjct 339 GEKELCVYQMECDDEPEAEGEKSDEKGRKDRCAVRLLRDPRDGKLSSLKYPLEKFEWSP 397 > pfa:PFE0885w eukaryotictranslation initiation factor 3 subunit, putative; K03253 translation initiation factor 3 subunit B Length=716 Score = 156 bits (395), Expect = 4e-38, Method: Composition-based stats. Identities = 80/176 (45%), Positives = 113/176 (64%), Gaps = 17/176 (9%) Query 2 PKRKSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSP 61 P+ T ++ P S QWS QGS+L +FH GI+LW G +FEK RL+HK VK+IMFSP Sbjct 199 PQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDSFEKLIRLQHKSVKEIMFSP 258 Query 62 KETYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLA 121 E Y+L+WDGTP S+RNEK+ W V+TG++LR F TP +P+ FPHFL+S D+KY+A Sbjct 259 NENYVLTWDGTPYSLRNEKSICIWRVITGKLLRSFITPEYSPKEKMFPHFLWSPDDKYIA 318 Query 122 KIG-DKELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYP-VEKFEWSP 175 IG KE+ +Y ++ + L+ D++ + LKY V++F+WSP Sbjct 319 CIGKQKEVYVY---------------ELPSMLLIEDQEKKRTPLKYSGVKEFDWSP 359 > tpv:TP04_0268 hypothetical protein; K03253 translation initiation factor 3 subunit B Length=731 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 19/191 (9%) Query 4 RKSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKE 63 R+ RR + + +WSP GS+LA + GI+L+ G NFE K R EHK VK I FSP E Sbjct 211 RERAEGRRAWADQKVEWSPNGSYLAVYKWAGIALYGGNNFELKIRFEHKNVKNIQFSPCE 270 Query 64 TYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKI 123 Y+L+WDG R+E++ W V+TGE+LR F TP +P+G +FPH L++ KY+A + Sbjct 271 EYLLTWDGLKGEDRHERSICIWRVITGELLRSFPTPLKSPKGGDFPHLLWNRTGKYIAML 330 Query 124 GD----KELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYPVEKFEWSPGRQH 179 E+ +Y + P+ + L+ G + LKY EKF+WSP Sbjct 331 NQFSEGSEVMVYRL------PE---------MTLIEGPDGKPAPLKYAAEKFDWSPQDDI 375 Query 180 CFFVDKGVLTT 190 V G L T Sbjct 376 LSVVIPGSLDT 386 > cpv:cgd2_360 prtip-like IF39 eukaryotic translation initiation factor 3 ; K03253 translation initiation factor 3 subunit B Length=724 Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 18/175 (10%) Query 5 KSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKET 64 ++K +R + QWSP GS+L TFHRQG++LW G +++KK R EHK+VK I FSP E Sbjct 215 RAKGGKRVWTDFSVQWSPMGSYLVTFHRQGVALWGGDDWDKKIRFEHKDVKFIDFSPNEE 274 Query 65 YMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAAT--PRGTEFP-HFLFSHDEKYLA 121 Y+L+WDG+ R +KA K W+V++G +LR F+TP T GT+ HFL+S YLA Sbjct 275 YLLTWDGSSPDSRFDKAVKVWHVLSGRLLRCFSTPTMTLNNNGTDSGLHFLWSPTGNYLA 334 Query 122 KIGDK-ELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYPVEKFEWSP 175 DK EL +Y D A G+ + LKYP++ F+WSP Sbjct 335 HCSDKGELFVYESSTMTLVEDPAT--------------GNKNPLKYPLQFFDWSP 375 > bbo:BBOV_II003250 18.m06273; eukaryotic translation initiation factor 3 subunit; K03253 translation initiation factor 3 subunit B Length=732 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 19/192 (9%) Query 3 KRKSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPK 62 +R+ +R + + +WS GS+L + R GI+L+ G +FE K R EH+ V+++ FSP Sbjct 210 ERERAQGKRVWTDQKVEWSRNGSYLVFYRRPGIALYGGPDFELKVRFEHRNVQKVSFSPD 269 Query 63 ETYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAK 122 E Y+L+WDGT S +++ + W+V+TGE L F++ + GT+ FL++H+ KY+A+ Sbjct 270 EEYLLTWDGTSDSDKSDNSVCIWHVITGEKLYSFSSREISTMGTDVLRFLWNHNGKYIAR 329 Query 123 IG----DKELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYPVEKFEWSPGRQ 178 + E+ +Y + P+ ++L+RD +G + LKY E+F+WSP Sbjct 330 LNPSTDGNEILVYQL------PE---------MELIRDAEGKPAPLKYAAERFDWSPTDD 374 Query 179 HCFFVDKGVLTT 190 + G L T Sbjct 375 ILSVLIPGTLDT 386 > hsa:8662 EIF3B, EIF3-ETA, EIF3-P110, EIF3-P116, EIF3S9, MGC104664, MGC131875, PRT1; eukaryotic translation initiation factor 3, subunit B; K03253 translation initiation factor 3 subunit B Length=814 Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 25/178 (14%) Query 6 SKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETY 65 S ER + +WSP+G++LATFH++GI+LW G F++ R H+ V+ I FSP E Y Sbjct 328 SIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERY 387 Query 66 MLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGD 125 ++++ + + +A W+++TG R F ++ +P F +SHD K+ A++ Sbjct 388 LVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESS----AHWPIFKWSHDGKFFARMTL 443 Query 126 KELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYP-VEKFEWSPGRQHCFF 182 L IY TP L D+K +LK ++ F WSPG F Sbjct 444 DTLSIYE----------------TPSMGLLDKK----SLKISGIKDFSWSPGGNIIAF 481 > mmu:27979 Eif3b, AL033316, AL033334, AL033369, AW208965, D5Wsu45e, EIF3-ETA, EIF3-P110, EIF3-P116, Eif3s9, PRT1; eukaryotic translation initiation factor 3, subunit B; K03253 translation initiation factor 3 subunit B Length=803 Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 25/178 (14%) Query 6 SKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETY 65 S ER + +WSP+G++LATFH++GI+LW G F++ R H+ V+ I FSP E Y Sbjct 317 SIEERARWTETYVRWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLIDFSPCERY 376 Query 66 MLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGD 125 ++++ + + +A W+++TG R F ++ +P F +SHD K+ A++ Sbjct 377 LVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESS----AHWPIFKWSHDGKFFARMTL 432 Query 126 KELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYP-VEKFEWSPGRQHCFF 182 L IY TP L D+K +LK ++ F WSPG F Sbjct 433 DTLSIYE----------------TPSMGLLDKK----SLKISGIKDFSWSPGGNIIAF 470 > xla:735075 eif3b, MGC99017, eIF-3-eta; eukaryotic translation initiation factor 3, subunit B; K03253 translation initiation factor 3 subunit B Length=688 Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 25/169 (14%) Query 9 ERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYMLS 68 ER + +WSP+G++LATFH++GI+LW G F++ R H+ V+ I FSP E Y+++ Sbjct 207 ERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVT 266 Query 69 WDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKEL 128 + + +A W+++TG R F ++ +P F +SHD K+ A++ L Sbjct 267 FSPLMDTKEEPQAIIIWDILTGHNKRGFHCESS----AHWPIFKWSHDGKFFARMTLDTL 322 Query 129 CIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYP-VEKFEWSPG 176 IY TP L D+K +LK ++ F WSPG Sbjct 323 SIYE----------------TPSMGLLDKK----SLKITGIKDFSWSPG 351 > cel:Y54E2A.11 eif-3.B; Eukaryotic Initiation Factor family member (eif-3.B); K03253 translation initiation factor 3 subunit B Length=725 Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 21/179 (11%) Query 7 KTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYM 66 K ER + WSP GS+L+T H+QGI LW G+++ + R H V+ I FSP ETY+ Sbjct 199 KAERANWTETVFTWSPHGSYLSTIHKQGIILWGGKDYARAHRFAHTNVQYIDFSPWETYL 258 Query 67 LSWDGTPASMR----NEKAFKTWNVMTGEMLRQFATPAATPRGT--EFPHFLFSHDEKYL 120 +++ S + + + W+V TGE+ + F+T T R +P F +S DEKY Sbjct 259 VTYAAPEESNSWGDCEKDSLRIWDVRTGELKKAFSTFELTGRTQLPTWPFFRWSFDEKYF 318 Query 121 AKIGDKELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALK----YPVEKFEWSP 175 A C+ A + KD ++ + + + EK + +++FEWSP Sbjct 319 A-------CLKAPE-KDKL---EREQKINGISIFESEKFELYEGRPVNIENIKQFEWSP 366 > dre:796380 eif3b, eif3s9, wu:fc17c01; eukaryotic translation initiation factor 3, subunit B; K03253 translation initiation factor 3 subunit B Length=681 Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 25/165 (15%) Query 19 QWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGTPASMRN 78 +WSP+G++LATFH++GI+LW G F++ R H+ V+ I FSP E Y++++ + + Sbjct 209 RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYVVTFSPLMDTKDD 268 Query 79 EKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDN 138 +A W+V+TG+ R F ++ +P F +S D K+ A++ L IY Sbjct 269 PQAIIIWDVLTGQKKRGFHCESS----AHWPIFKWSPDGKFFARMTQDMLSIYE------ 318 Query 139 FPDQAADEDVTPVKLLRDEKGHFSALKYP-VEKFEWSPGRQHCFF 182 TP L ++K +LK ++ F WSPG F Sbjct 319 ----------TPSMGLLEKK----SLKINGIKDFSWSPGDNIIAF 349 > ath:AT5G25780 EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2); nucleic acid binding / protein binding / translation initiation factor; K03253 translation initiation factor 3 subunit B Length=714 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%) Query 10 RRFGPNSRSQWSPQGSFLATFHRQGISLWAGRN-FEKKARLEHKEVKQIMFSPKETYMLS 68 R + S QWSP G++L T H+QG ++W G + F + R +H VK + FSP E Y+++ Sbjct 208 RSYWTESYVQWSPIGTYLVTLHKQGAAVWGGADTFTRLMRYQHSMVKLVDFSPGEKYLVT 267 Query 69 WDGT-PASMRNEK--AFKTWNVMTGEMLRQFATPA--------ATPRGTEFPHFLFS--H 115 + P++ R+ K ++V TG M+R F A G +P F ++ Sbjct 268 YHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGSADEFSIGGPGGVAGASWPVFRWAGGK 327 Query 116 DEKYLAKIGDKELCIY 131 D+KY AK+ + +Y Sbjct 328 DDKYFAKLSKNTISVY 343 > ath:AT5G27640 TIF3B1; TIF3B1 (TRANSLATION INITIATION FACTOR 3B1); nucleic acid binding / translation initiation factor Length=738 Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%) Query 10 RRFGPNSRSQWSPQGSFLATFHRQGISLWAGRN-FEKKARLEHKEVKQIMFSPKETYMLS 68 R + S QWSP G++L T H+QG ++W G + F + R +H VK + FSP E Y+++ Sbjct 233 RPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADTFTRLMRYQHSMVKLVDFSPGEKYLVT 292 Query 69 WDGT-PASMRNEK--AFKTWNVMTGEMLRQFATPA--------ATPRGTEFPHFLFS--H 115 + P++ R+ K ++V TG M+R F A G +P F ++ Sbjct 293 YHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGSADEFSIGGPGGVAGASWPVFRWAGGK 352 Query 116 DEKYLAKIGDKELCIY 131 D+KY AK+ + +Y Sbjct 353 DDKYFAKLSKNTISVY 368 > sce:YOR361C PRT1, CDC63, DNA26; Prt1p; K03253 translation initiation factor 3 subunit B Length=763 Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 23/143 (16%) Query 16 SRSQWS-------PQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYMLS 68 SR WS P+G++L ++H+QG++ W G NF++ R H +V+ SP E Y+++ Sbjct 227 SRENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVT 286 Query 69 WDGTPASMRNEKAFK------------TWNVMTGEMLRQFATPAATPRGTEFPHFLFSHD 116 + P + + F W++ +G ++ F P ++P +S++ Sbjct 287 FSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATF--PVIKSPYLKWPLVRWSYN 344 Query 117 EKYLAKIGDKELCIYAMDPKDNF 139 +KY A++ L ++ D NF Sbjct 345 DKYCARMVGDSLIVH--DATKNF 365 > ath:AT5G13480 FY; FY; protein binding Length=647 Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%) Query 16 SRSQWSPQGSFLATFHRQG-ISLWAGR--NFEKKARLEHKEVKQIMFSPKETYMLSWD-- 70 +R W+P G L T + G +LW G+ NFE + + ++ +++S E YM+S D Sbjct 127 NRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDG 186 Query 71 GT----PASMRNEKAFKT 84 GT +M N KA KT Sbjct 187 GTLKYWQNNMNNVKANKT 204 > sce:YMR146C TIF34; Tif34p; K03246 translation initiation factor 3 subunit I Length=347 Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 13/118 (11%) Query 2 PKRKSKTERRFGPNSRSQWSPQGSFLATFHRQG-ISLW-AGRNFE--KKARLEHKEVKQI 57 P K T + + WS +G ++ H+ G IS + N+E L K + + Sbjct 143 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 202 Query 58 MFSPKETYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFAT--PAATPRGTEFPHFLF 113 FSP TY ++ S R+ +F +V T ++L+++ T P T T F+ Sbjct 203 QFSPDLTYFIT------SSRDTNSFLV-DVSTLQVLKKYETDCPLNTAVITPLKEFII 253 > sce:YGR054W Eukaryotic initiation factor (eIF) 2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A; K15026 translation initiation factor 2A Length=642 Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Query 5 KSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKA-RLEHKEVKQIMFSPKE 63 +S T + P S SP G FLA ++ + ++ G + ++ +V + FSP Sbjct 24 QSNTNSKDFPVISSVLSPCGRFLALSTKENVKVFTGPCLDNVLLTMKLSDVYDLHFSPAG 83 Query 64 TYMLSWDGTPASMRNEKAFKTW 85 Y+ +W+ N K K W Sbjct 84 NYLSTWERASIQDPNHKNVKVW 105 > mmu:67337 Cstf1, 1700057K18Rik, AI788832; cleavage stimulation factor, 3' pre-RNA, subunit 1; K14406 cleavage stimulation factor subunit 1 Length=431 Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 16/109 (14%) Query 19 QWSPQGSFLATFHRQG-ISLWAG------RNFEKKARLEHKEVKQIMFSPKETYMLSWDG 71 ++P + T + G I LW G FEK + EV +FS Y+LS Sbjct 269 NYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAH--DGAEVCSAIFSKNSKYILSSG- 325 Query 72 TPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYL 120 + K W + TG L ++ + R +F+H E Y+ Sbjct 326 ------KDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYI 368 > xla:447785 cstf1, MGC83790; cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa; K14406 cleavage stimulation factor subunit 1 Length=431 Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 16/108 (14%) Query 20 WSPQGSFLATFHRQG-ISLWAG------RNFEKKARLEHKEVKQIMFSPKETYMLSWDGT 72 ++P + T + G I LW G +EK + EV +FS Y+LS Sbjct 270 YNPTANTYVTCSKDGSIKLWDGVSNRCVTTYEKAH--DGAEVCSAIFSKNSKYILSSG-- 325 Query 73 PASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYL 120 + + W + TG ML ++ + R +F+H E Y+ Sbjct 326 -----KDSVARLWEISTGRMLVKYTGAGLSGRQVHRTQAVFNHTEDYV 368 > bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containing protein; K13111 WD40 repeat-containing protein SMU1 Length=533 Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Query 29 TFHRQGISLWAGRNFEKKARL----EHKEVKQI--MFSPKETYMLSWDGTPASMRNEKAF 82 TF R +SL G +F+K A++ + +K+ S + S+DG + + Sbjct 325 TFSRNSMSLLTG-SFDKTAKIHGLKSGRSIKEFKGHHSIVNAAIYSYDGNKVITGSSDGY 383 Query 83 -KTWNVMTGEMLRQFATPAATPRGTEFPH 110 K W+ TG++L+ F GT+ P+ Sbjct 384 IKVWDSRTGDLLKSFLAYTGPGSGTQIPN 412 > xla:380171 cstf1, MGC53063; cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa; K14406 cleavage stimulation factor subunit 1 Length=431 Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 16/108 (14%) Query 20 WSPQGSFLATFHRQG-ISLWAG------RNFEKKARLEHKEVKQIMFSPKETYMLSWDGT 72 ++P + T + G I LW G +EK + EV +FS Y+LS Sbjct 270 YNPTANTYVTCSKDGSIKLWDGVSNRCITTYEKAH--DGAEVCSAIFSKNSKYILSSG-- 325 Query 73 PASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYL 120 + + W + TG M+ ++ + R +F+H E Y+ Sbjct 326 -----KDSVGRLWEISTGRMMVKYTGAGLSGRQVHRTQAVFNHTEDYV 368 > ath:AT1G04510 transducin family protein / WD-40 repeat family protein; K10599 pre-mRNA-processing factor 19 [EC:6.3.2.19] Length=523 Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 13/136 (9%) Query 13 GPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGT 72 G + +S G FLAT G+ LW R + + + + F +Y+ G Sbjct 397 GEITSISFSENGYFLATAALDGVRLWDLRKLKNFRTFDFPDANSVEFDHSGSYL----GI 452 Query 73 PASMRNEKAFKTWNVMTG-EMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIG--DKELC 129 AS + + F+ +V ++ + T + T F D KY+A +G D+ L Sbjct 453 AAS--DIRVFQAASVKAEWNPIKTLPDLSGTGKSTSVK---FGLDSKYIA-VGSMDRNLR 506 Query 130 IYAMDPKDNFPDQAAD 145 I+ + DN D A D Sbjct 507 IFGLPDDDNTEDSAQD 522 > cel:E04D5.1 hypothetical protein; K15026 translation initiation factor 2A Length=570 Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 13/156 (8%) Query 5 KSKTERRFGPNSRSQWSPQGSFLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKET 64 ++KT R N + +S G A Q ++ ++ +E K ++I+FSPK+ Sbjct 31 QNKTSRDVACNVFA-YSNNGQLFAYCDNQVTRVFEIATNKEILCVELKRTRKILFSPKDN 89 Query 65 YMLSWD-------GTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDE 117 ++L+++ T + + E + +++ G+ + F+ P + FS DE Sbjct 90 FLLTFEPWAVYGPKTAENQKPEPNVRVYSLADGKHVSTFSAPKEASWEPQ-----FSDDE 144 Query 118 KYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPVKL 153 A++ E+ Y D + + ++ T L Sbjct 145 SLAARMVGSEVFFYTNMSFDRYDHKLVEKGATNFAL 180 > dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin p80 (WD repeat containing) subunit B 1 Length=694 Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 25/176 (14%) Query 16 SRSQWSPQGSFLATFH-RQGISLWAGRN----FEKKARLEHKEVKQIMFSPKETYMLSWD 70 S + P G +LA+ I LW R F K + V+ + FSP ++ Sbjct 109 SSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQ--AVRCLAFSPDGKWL---- 162 Query 71 GTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCI 130 AS ++ K W+++ G+M+ +F + + +F H +YL G + + Sbjct 163 ---ASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF------HPNEYLLASGSADRTV 213 Query 131 YAMD-PKDNFPDQAADEDVTPVKLLRDEKGH--FSALKYPVEKFEWSPGRQHCFFV 183 D K N + E +L + G +S + + + W P R CF V Sbjct 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDR--CFDV 267 > cel:C18E3.5 hypothetical protein Length=331 Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 33/164 (20%) Query 18 SQWSPQGSFLATF-HRQGISLW-AGRNFEKKARLE-HK-EVKQIMFSPKETYMLSWDGTP 73 SQ+S GSFLA+ + Q I LW E A L+ HK + ++ F+ ++++S GT Sbjct 42 SQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVS-AGT- 99 Query 74 ASMRNEKAFKTWNVMTGEMLRQFAT------------------PAATPRGTEFPHFLFSH 115 +K + W++ TG +R F + +A+ GT H + S Sbjct 100 -----DKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSK 154 Query 116 D--EKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPVKLLRDE 157 + +K++ K ++ + D DN D + +LR++ Sbjct 155 EAAKKFICKY--QQTAVTFNDAADNVICGGIDNQIKVWDMLRND 196 > hsa:1477 CSTF1, CstF-50, CstFp50; cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa; K14406 cleavage stimulation factor subunit 1 Length=431 Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 16/109 (14%) Query 19 QWSPQGSFLATFHRQG-ISLWAG------RNFEKKARLEHKEVKQIMFSPKETYMLSWDG 71 ++ + T + G I LW G FEK + EV +FS Y+LS Sbjct 269 NYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAH--DGAEVCSAIFSKNSKYILSSG- 325 Query 72 TPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYL 120 + K W + TG L ++ + R +F+H E Y+ Sbjct 326 ------KDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYV 368 > xla:444261 apaf1, MGC80868, apaf-1; apoptotic peptidase activating factor 1; K02084 apoptotic protease-activating factor Length=1248 Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Query 19 QWSPQGS-FLATFHRQGISLWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGTPASMR 77 ++SP+ S FL + Q + LW N K + K + F+ +ET +L + Sbjct 885 KFSPKSSSFLTSSDDQTVKLWETSNVSKPSATNLKREFDVSFNGEETLVL-------ATS 937 Query 78 NEKAFKTWNVMTGEMLRQFAT 98 + N MTGE L Q T Sbjct 938 KDDCILLINGMTGETLSQINT 958 > ath:AT5G42010 WD-40 repeat family protein Length=709 Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 14/95 (14%) Query 94 RQFATPAATPRGTEFPH-------FLFSHDEKYLAKIGDKELCIYAM-----DPKDNFPD 141 +QF ++ G EF FSHD KYLA G E C+ + D + + Sbjct 239 KQFKELSSLCVGQEFSAHDGSIVVMKFSHDGKYLASAG--EDCVVRVWNIIEDERRDNEF 296 Query 142 QAADEDVTPVKLLRDEKGHFSALKYPVEKFEWSPG 176 + A+ D + V ++K LK EK E S G Sbjct 297 EVAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRG 331 > tgo:TGME49_085660 DEAD/DEAH box helicase domain-containing protein ; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1329 Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 20/111 (18%) Query 57 IMFSPKETYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEFPHFLFSHD 116 I+ PK+ M+ T + N + F W + R+ T + R T HFLF HD Sbjct 588 IILLPKQVNMVLLSAT---LPNYRQFAEW--IGSVKQREVFTLSTDRRPTPLRHFLFFHD 642 Query 117 EKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYP 167 + +L MD K F A +E V+ EKG+ A + P Sbjct 643 KAFL-----------LMDAKGRFQAGAYNEAFKHVR----EKGNPQAARKP 678 > mmu:11783 Apaf1, 6230400I06Rik, Apaf-1, Apaf1l, KIAA0413, fog, mKIAA0413; apoptotic peptidase activating factor 1; K02084 apoptotic protease-activating factor Length=1249 Score = 30.0 bits (66), Expect = 5.8, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%) Query 51 HKEVKQIMFSPKETYMLSW--DGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTEF 108 H+E + +++ +LSW DGT K WNV+TG + R F +GT Sbjct 1043 HQETVKDFRLLQDSRLLSWSFDGT---------VKVWNVITGRIERDF----TCHQGTVL 1089 Query 109 PHFLFSHDEKYLAKIGDKELCIYAMD 134 + S K+ + DK I++ D Sbjct 1090 SCAISSDATKFSSTSADKTAKIWSFD 1115 > ath:AT5G05310 hypothetical protein Length=496 Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query 74 ASMRNEKAFKTW----NVMTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKI 123 ++ N A W V E LR+ T T G E + S DEKY AK+ Sbjct 377 VALGNLVAIAIWPTWVTVAVSETLRKVTTYVVTRPGRELLFTVVSQDEKYKAKV 430 > ath:AT1G73720 transducin family protein / WD-40 repeat family protein; K13111 WD40 repeat-containing protein SMU1 Length=511 Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Query 11 RFGPNSRSQ---WSPQGSFLATFHRQG-ISLWAGRNFEKKARLEHKEVKQIMFSPKETYM 66 +FG S ++ +SP G FLA+ G I +W + + K L+++ + M Sbjct 209 KFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLC 268 Query 67 LSWDGTP---ASMRNEKAFKTWNVMTGEMLRQF 96 + + AS + K W + TG +R+F Sbjct 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRF 301 Lambda K H 0.319 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5608917492 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40