bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0336_orf2
Length=83
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_100310 26S protease regulatory subunit 6a, putative... 154 5e-38
pfa:PF11_0314 26S protease subunit regulatory subunit 6a, puta... 137 7e-33
ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit ... 133 1e-31
cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like... 132 3e-31
ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPAS... 129 2e-30
bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit 6... 129 3e-30
cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA ... 125 3e-29
mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 125 3e-29
hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)... 125 4e-29
xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosom... 125 4e-29
dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome, ... 124 9e-29
tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome re... 121 4e-28
sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulato... 113 2e-25
ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 68.2 6e-12
ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 66.6 2e-11
xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome ... 62.4 3e-10
bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein; ... 62.4 3e-10
tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S pr... 62.0 4e-10
tgo:TGME49_061010 26S protease regulatory subunit 8, putative ... 61.6 6e-10
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 61.6 6e-10
dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10; ... 61.6 6e-10
cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S pr... 61.6 6e-10
ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPAS... 61.6 6e-10
mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subu... 61.2 7e-10
xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease I... 61.2 8e-10
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 61.2 8e-10
xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot... 61.2 8e-10
dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom... 61.2 8e-10
hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p... 61.2 8e-10
xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 60.8 1e-09
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 60.8 1e-09
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 60.5 1e-09
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 60.5 1e-09
pfa:PF13_0033 26S proteasome regulatory subunit, putative; K03... 60.5 1e-09
hsa:5706 PSMC6, CADP44, MGC12520, P44, SUG2, p42; proteasome (... 60.5 1e-09
mmu:67089 Psmc6, 2300001E01Rik, AI451058, MGC151129; proteasom... 59.7 2e-09
cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 59.7 2e-09
xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome... 59.7 3e-09
bbo:BBOV_IV009940 23.m06337; 26S protease regulatory subunit 7... 58.2 6e-09
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 57.4 1e-08
sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S re... 57.4 1e-08
tgo:TGME49_028210 26S proteasome regulatory ATPase subunit, pu... 57.0 1e-08
pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasom... 57.0 1e-08
sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases ... 56.6 2e-08
cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 56.6 2e-08
cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-lik... 56.2 2e-08
cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+ ... 56.2 2e-08
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 56.2 2e-08
bbo:BBOV_II003900 18.m06325; 26S proteasome AAA-ATPase subunit... 55.1 5e-08
ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regu... 55.1 6e-08
> tgo:TGME49_100310 26S protease regulatory subunit 6a, putative
; K03065 26S proteasome regulatory subunit T5
Length=655
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/83 (87%), Positives = 78/83 (93%), Gaps = 0/83 (0%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+ARERILQIHARKM VNK DVNFRELAR+TDDFNGAQLKAVCVEAGM+ALRR ASEL
Sbjct 573 NEEARERILQIHARKMNVNKEDVNFRELARATDDFNGAQLKAVCVEAGMVALRRGASELC 632
Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83
HEDFV+G+A VQAKKKSSLNYFT
Sbjct 633 HEDFVEGVAQVQAKKKSSLNYFT 655
> pfa:PF11_0314 26S protease subunit regulatory subunit 6a, putative;
K03065 26S proteasome regulatory subunit T5
Length=439
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE++R RILQIH+RKM V+K DVNF ELARSTDDFNGAQLKAVCVEAGMIALRR A+E+
Sbjct 358 NEESRARILQIHSRKMNVHK-DVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEID 416
Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83
HEDFV+GI +V +KKKS+LNYFT
Sbjct 417 HEDFVEGITSVLSKKKSTLNYFT 439
> ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit
RPT5B); ATPase/ calmodulin binding; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 73/82 (89%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
E+AR RILQIH+RKM VN ADVNF ELARSTDDFNGAQLKAVCVEAGM+ALRR+A+E+
Sbjct 342 TEEARGRILQIHSRKMNVN-ADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HEDF +GI VQAKKK+SLNY+
Sbjct 401 HEDFNEGIIQVQAKKKASLNYY 422
> cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like
family member (rpt-5); K03065 26S proteasome regulatory subunit
T5
Length=430
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NEDAR RI+QIH+RKM VNK DVNF ELAR TDDFNGAQ KAVCVEAGMIALRR+A+E+
Sbjct 349 NEDARARIMQIHSRKMNVNK-DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEIL 407
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HEDF+ I VQAKKK+SLNY+
Sbjct 408 HEDFMDAILEVQAKKKASLNYY 429
> ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE
5A); ATPase/ calmodulin binding; K03065 26S proteasome regulatory
subunit T5
Length=424
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
E+AR RILQIH+RKM V+ DVNF ELARSTDDFNGAQLKAVCVEAGM+ALRR+A+E+
Sbjct 343 TEEARARILQIHSRKMNVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 401
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HEDF +GI VQAKKK+SLNY+
Sbjct 402 HEDFNEGIIQVQAKKKASLNYY 423
> bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit
6A; K03065 26S proteasome regulatory subunit T5
Length=418
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NEDAR I+QIH+RKM V+ DVNF+ELARST+DFNGAQLKAVCVEAGM+ALRR A EL
Sbjct 337 NEDARAHIMQIHSRKMNVH-PDVNFKELARSTEDFNGAQLKAVCVEAGMVALRRGAKELD 395
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
H DFV+GIA + AKKK++LNY
Sbjct 396 HNDFVEGIAVLSAKKKTTLNYL 417
> cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA
ATpase ; K03065 26S proteasome regulatory subunit T5
Length=461
Score = 125 bits (315), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/83 (75%), Positives = 73/83 (87%), Gaps = 0/83 (0%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR RILQIH+RKM V+ DVNF+EL+RSTDDFNGAQLKAVCVEAGM ALRR A+ L
Sbjct 379 NEEARSRILQIHSRKMNVDLNDVNFQELSRSTDDFNGAQLKAVCVEAGMTALRRGATILC 438
Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83
HED+V+GIAAV AKKKS L+YF+
Sbjct 439 HEDYVEGIAAVLAKKKSPLSYFS 461
> mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S
subunit, ATPase 3; K03065 26S proteasome regulatory subunit
T5
Length=442
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR RI+QIH+RKM V+ DVN+ ELAR TDDFNGAQ KAVCVEAGMIALRR A+EL
Sbjct 361 NEEARARIMQIHSRKMNVS-PDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 419
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HED+++GI VQAKKK++L Y+
Sbjct 420 HEDYMEGILEVQAKKKANLQYY 441
> hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)
26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=439
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR RI+QIH+RKM V+ DVN+ ELAR TDDFNGAQ KAVCVEAGMIALRR A+EL
Sbjct 358 NEEARARIMQIHSRKMNVS-PDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 416
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HED+++GI VQAKKK++L Y+
Sbjct 417 HEDYMEGILEVQAKKKANLQYY 438
> xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR RI+QIH+RKM V+ DVN+ ELAR TDDFNGAQ KAVCVEAGMIALRR A+EL
Sbjct 342 NEEARARIMQIHSRKMNVS-PDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 400
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HED+++GI VQAKKK++L Y+
Sbjct 401 HEDYMEGILEVQAKKKANLQYY 422
> dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=404
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR RI+QIH+RKM V DVNF ELAR TDDFNGAQ KAVCVEAGMIALRR A+EL
Sbjct 323 NEEARARIMQIHSRKMNVC-LDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELN 381
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HED+++GI VQAKKK++L Y+
Sbjct 382 HEDYMEGILEVQAKKKANLQYY 403
> tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome
regulatory subunit T5
Length=419
Score = 121 bits (304), Expect = 4e-28, Method: Composition-based stats.
Identities = 60/83 (72%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR ILQIH+RKM V+K D N+ EL+RST++FNGAQLKAVC+EAGM+ALRR A+EL
Sbjct 338 NEEARAHILQIHSRKMNVHK-DTNYMELSRSTENFNGAQLKAVCIEAGMVALRRGATELD 396
Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83
HEDFV+GIA VQAKKK+ LNY T
Sbjct 397 HEDFVEGIAMVQAKKKNPLNYLT 419
> sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulatory
particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; recruited to the GAL1-10 promoter
region upon induction of transcription; K03065 26S proteasome
regulatory subunit T5
Length=434
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+ED+R +ILQIH+RKMT + D+N++ELARSTD+FNGAQLKAV VEAGMIALR S ++
Sbjct 353 SEDSRAQILQIHSRKMTTDD-DINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVK 411
Query 61 HEDFVQGIAAVQAKKKSSLNYF 82
HEDFV+GI+ VQA+K S++++
Sbjct 412 HEDFVEGISEVQARKSKSVSFY 433
> ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a);
ATPase; K03062 26S proteasome regulatory subunit T2
Length=443
Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query 5 RERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDF 64
R RI QIH KMT+++ DVN E + D+F+GA +KA+C EAG++ALR ++ H DF
Sbjct 364 RRRIFQIHTSKMTLSE-DVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDF 422
Query 65 VQGIAAVQAKKKSSL 79
+ V KKK +
Sbjct 423 KKAKEKVMFKKKEGV 437
> ath:AT2G20140 26S protease regulatory complex subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=443
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query 5 RERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDF 64
R RI QIH KMT+ + DVN E + D+F+GA +KA+C EAG++ALR ++ H DF
Sbjct 364 RRRIFQIHTSKMTLAE-DVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDF 422
Query 65 VQGIAAVQAKKKSSL 79
+ V KKK +
Sbjct 423 KKAKEKVMFKKKEGV 437
> xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome
regulatory subunit T6
Length=461
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR IL+IH+RKM + + +N R++A +GA++K VC EAGM ALR +
Sbjct 315 NEEARLDILKIHSRKMNLTRG-INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 373
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 374 QEDFEMAVAKVMQK 387
> bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein;
K03066 26S proteasome regulatory subunit T6
Length=405
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
N +AR +IL IH+RKM + + ++ +AR + +GA++KAVC EAGM ALR +
Sbjct 320 NAEARAQILAIHSRKMNLVRG-IDLEMIAREMTNVSGAEVKAVCTEAGMFALRERRVHVT 378
Query 61 HEDFVQGIAAVQAK 74
EDF+ +A V K
Sbjct 379 QEDFLMAVAKVMKK 392
> tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
N + RE+IL+IH++KM + + D++ E+A+S +GA++K+VC EAGM ALR +
Sbjct 308 NAEGREQILRIHSKKMNLLR-DIDLLEIAKSMTGCSGAEIKSVCTEAGMFALRERRVHVT 366
Query 61 HEDFVQGIAAVQAK 74
+EDF + V K
Sbjct 367 NEDFQMAVVKVMKK 380
> tgo:TGME49_061010 26S protease regulatory subunit 8, putative
; K03066 26S proteasome regulatory subunit T6
Length=409
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
N DAR IL+IH+RKM + + ++ R++A+ + +GA++KAVC EAGM ALR +
Sbjct 324 NVDARTEILKIHSRKMNLMRG-IDMRKIAQEMNGSSGAEVKAVCTEAGMFALRERRMFVT 382
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 383 QEDFEMAVAKVMKK 396
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE++R IL+IH+RKM + + ++ +++A + +GA+LKAVC EAGM ALR +
Sbjct 334 NEESRFDILKIHSRKMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVT 392
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 393 QEDFEMAVAKVMKK 406
> dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10;
proteasome (prosome, macropain) 26S subunit, ATPase, 6; K03064
26S proteasome regulatory subunit T4
Length=389
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IH+ +T D+++ + + +D FNGA L+ VC EAGM A+R + +
Sbjct 305 NEQARLDILKIHSGPIT-KHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVT 363
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF++ + V KK S L+Y
Sbjct 364 QEDFMKAVRKVADSKKLESKLDY 386
> cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NEDAR IL+IH+RKM + + ++ R++A+ +GA+ KAVC EAGM ALR +
Sbjct 308 NEDARLEILKIHSRKMNLVRG-IDLRKVAQQMQGASGAESKAVCTEAGMFALRERRKHVT 366
Query 61 HEDFVQGIAAVQAKKKSSLN 80
EDF ++ V KK S N
Sbjct 367 QEDFDMAVSRVM-KKDSDWN 385
> ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE
6A); ATPase; K03066 26S proteasome regulatory subunit T6
Length=419
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE++R IL+IH+RKM + + ++ +++A + +GA+LKAVC EAGM ALR +
Sbjct 334 NEESRFDILKIHSRKMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVT 392
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 393 QEDFEMAVAKVMKK 406
> mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subunit,
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406
Score = 61.2 bits (147), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR IL+IH+RKM + + +N R++A +GA++K VC EAGM ALR +
Sbjct 321 NEEARLDILKIHSRKMNLTRG-INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 379
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 380 QEDFEMAVAKVMQK 393
> xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease
III-like 1 (EC:4.2.99.18); K03065 26S proteasome regulatory
subunit T5
Length=405
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASEL 59
NE+AR RI+QIH+RKM V+ DVN+ ELAR K VEAGMIALRR A+E
Sbjct 342 NEEARARIMQIHSRKMNVS-PDVNYEELARCPTISMALSAKQFGVEAGMIALRRGATEF 399
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E + RI QIH +MTV + DV+ +L + DD +GA +KA+C EAG++ALR ++
Sbjct 357 DEKTKRRIFQIHTSRMTVAE-DVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query 61 HEDFVQGIAAVQAKKK 76
+EDF + V KK+
Sbjct 416 NEDFKKSKENVLYKKQ 431
> xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=415
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR IL+IH+RKM + + +N R++A +GA++K VC EAGM ALR +
Sbjct 330 NEEARLDILKIHSRKMNLTRG-INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 388
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 389 QEDFEMAVAKVMQK 402
> dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S
proteasome regulatory subunit T6
Length=406
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR IL+IH+RKM + + +N R++A +GA++K VC EAGM ALR +
Sbjct 321 NEEARLDILKIHSRKMNLTRG-INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 379
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 380 QEDFEMAVAKVMQK 393
> hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG;
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=398
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE+AR IL+IH+RKM + + +N R++A +GA++K VC EAGM ALR +
Sbjct 313 NEEARLDILKIHSRKMNLTRG-INLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 371
Query 61 HEDFVQGIAAVQAK 74
EDF +A V K
Sbjct 372 QEDFEMAVAKVMQK 385
> xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain)
26S subunit, ATPase, 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E ++RI QIH +MT+ DV +L + DD +GA +KA+C EAG++ALR ++
Sbjct 357 DEKTKKRIFQIHTSRMTL-ATDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query 61 HEDFVQGIAAVQAKKK 76
+EDF + V KK+
Sbjct 416 NEDFKKSKENVLYKKQ 431
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E + RI QIH +MTV DV +L + DD +GA +KA+C EAG++ALR ++
Sbjct 357 DEKTKRRIFQIHTSRMTVAD-DVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query 61 HEDFVQGIAAVQAKKK 76
+EDF + V KK+
Sbjct 416 NEDFKKSKENVLYKKQ 431
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E ++RI QIH +MT+ DV +L + DD +GA +KA+C EAG++ALR ++
Sbjct 357 DEKTKKRIFQIHTSRMTLAD-DVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query 61 HEDFVQGIAAVQAKKK 76
+EDF + V KK+
Sbjct 416 NEDFKKSKENVLYKKQ 431
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E ++RI QIH +MT+ DV +L + DD +GA +KA+C EAG++ALR ++
Sbjct 357 DEKTKKRIFQIHTSRMTLAD-DVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query 61 HEDFVQGIAAVQAKKK 76
+EDF + V KK+
Sbjct 416 NEDFKKSKENVLYKKQ 431
> pfa:PF13_0033 26S proteasome regulatory subunit, putative; K03064
26S proteasome regulatory subunit T4
Length=393
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IHA KMT D+++ + R D FNGA L+ VC EAGM A+R +
Sbjct 309 NETARIEILKIHANKMT-KLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVI 367
Query 61 HEDFVQGIAAVQAKKK 76
EDF + + KK
Sbjct 368 EEDFYKAARKISEGKK 383
> hsa:5706 PSMC6, CADP44, MGC12520, P44, SUG2, p42; proteasome
(prosome, macropain) 26S subunit, ATPase, 6; K03064 26S proteasome
regulatory subunit T4
Length=403
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IHA +T ++++ + + +D FNGA L+ VC EAGM A+R + +
Sbjct 319 NEQARLDILKIHAGPIT-KHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 377
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF++ + V KK S L+Y
Sbjct 378 QEDFMKAVRKVADSKKLESKLDY 400
> mmu:67089 Psmc6, 2300001E01Rik, AI451058, MGC151129; proteasome
(prosome, macropain) 26S subunit, ATPase, 6; K03064 26S
proteasome regulatory subunit T4
Length=389
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IHA +T ++++ + + +D FNGA L+ VC EAGM A+R + +
Sbjct 305 NEQARLDILKIHAGPIT-KHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF++ + V KK S L+Y
Sbjct 364 QEDFMKAVRKVADSKKLESKLDY 386
> cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like
family member (rpt-2); K03062 26S proteasome regulatory subunit
T2
Length=443
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E + RI QIH +MT+ K +VN E + D+ +GA +KA+C EAG++ALR +
Sbjct 360 DEKTKRRIFQIHTSRMTLGK-EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVT 418
Query 61 HEDFVQGIAAVQAKKK 76
EDF + V +KK
Sbjct 419 MEDFQKSKENVLYRKK 434
> xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome,
macropain) 26S subunit, ATPase, 6; K03064 26S proteasome
regulatory subunit T4
Length=389
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IHA +T ++++ + + +D FNGA L+ VC EAGM A+R + +
Sbjct 305 NEQARLDILKIHAGPIT-KHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF++ + V KK S L+Y
Sbjct 364 QEDFMKAVRKVADSKKLESKLDY 386
> bbo:BBOV_IV009940 23.m06337; 26S protease regulatory subunit
7; K03061 26S proteasome regulatory subunit T1
Length=425
Score = 58.2 bits (139), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query 3 DARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHE 62
D R+ I +IHA+ M+V K ++ + LAR + GA L++VC EAGM A+R + +
Sbjct 341 DGRKHIFKIHAKTMSVEK-NIRYELLARLCPNSTGADLRSVCTEAGMFAIRSRRKTITEK 399
Query 63 DFVQGIAAV-QAKKKSS 78
DF+ I V Q KK S
Sbjct 400 DFIDAITKVIQGYKKFS 416
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+ + +I +IH KMT++K DV+ E + DD +GA +KA+C EAG++ALR ++
Sbjct 332 DSKTKRKIFEIHTSKMTMSK-DVDLDEFVVNKDDLSGADIKAMCTEAGLLALRERRMQIT 390
Query 61 HEDFVQGIAAVQAKKKSSL 79
D ++ V +KK ++
Sbjct 391 QADLMKAKEKVLYQKKGNV 409
> sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; required for normal peptide
hydrolysis by the core 20S particle; K03062 26S proteasome
regulatory subunit T2
Length=437
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query 5 RERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDF 64
+++IL IH KM +++ DVN L + DD +GA ++A+C EAG++ALR ++ EDF
Sbjct 358 KKKILGIHTSKMNLSE-DVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416
Query 65 VQGIAAVQAKK 75
Q V K
Sbjct 417 KQAKERVMKNK 427
> tgo:TGME49_028210 26S proteasome regulatory ATPase subunit,
putative ; K03064 26S proteasome regulatory subunit T4
Length=398
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE AR IL+IH+ K+ + D+++ + + D FNGA L+ VC EAGM A+R +
Sbjct 315 NETARVDILKIHSSKIA-KQGDIDYEAICKLCDGFNGADLRNVCTEAGMFAIRAERDYVV 373
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF + + KK S+++Y
Sbjct 374 EEDFFKAARKLADNKKLESTIDY 396
> pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasome
regulatory subunit T6
Length=435
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
N +AR IL+IH+RKM + + ++ ++A ++ +GA++KAVC EAGM ALR +
Sbjct 350 NVEARMEILKIHSRKMNLMRG-IDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVT 408
Query 61 HEDFVQGIAAV 71
EDF +A V
Sbjct 409 QEDFEMAVAKV 419
> sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases
of the 19S regulatory particle of the 26S proteasome involved
in the degradation of ubiquitinated substrates; bound by
ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly
to the nucleus throughout the cell cycle; K03066 26S proteasome
regulatory subunit T6
Length=405
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query 4 ARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHED 63
AR IL+IH+RKM + + +N R++A + +GA +K VC EAGM ALR + ED
Sbjct 323 ARAEILRIHSRKMNLTRG-INLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 381
Query 64 FVQGIAAVQAKKKSS 78
F + V K + +
Sbjct 382 FELAVGKVMNKNQET 396
> cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query 5 RERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDF 64
+ RI QIH KMT++ DV+ E + DD +GA +KA+C EAG++ALR + ED
Sbjct 366 KRRIFQIHTSKMTLSD-DVDLEEFIMAKDDISGADIKAICTEAGLLALRERRMRVTQEDL 424
Query 65 VQGIAAVQAKKKSSL 79
+ +KK +
Sbjct 425 RKAKEKALYRKKGGI 439
> cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-like
family member (rpt-6); K03066 26S proteasome regulatory
subunit T6
Length=416
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
+E AR IL+IH+RKM + + +N ++A +GA++K+VC EAGM ALR +
Sbjct 331 DEKARADILKIHSRKMNLMRG-INMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVT 389
Query 61 HEDFVQGIAAVQAK 74
EDF + V K
Sbjct 390 QEDFEMAVGKVMQK 403
> cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+
ATpase ; K03064 26S proteasome regulatory subunit T4
Length=406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE +R IL+IH+ K+ + +++F + + D FNGA ++ VC EAGM A+R +
Sbjct 322 NETSRVEILKIHSSKLA-KQGEIDFDAICKLCDGFNGADMRNVCSEAGMFAIRAERDYII 380
Query 61 HEDFVQGIAAVQAKKK--SSLNY 81
EDF++ + + KK +L+Y
Sbjct 381 EEDFLKAVRKLAENKKMEGNLDY 403
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query 5 RERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDF 64
+ RI QIH KMT++ DV+ E S D+ +GA +KA+C EAG++ALR ++ D
Sbjct 369 KRRIFQIHTSKMTMS-PDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADL 427
Query 65 VQGIAAVQAKKKSSL 79
+ +KK ++
Sbjct 428 RKARDKALFQKKGNI 442
> bbo:BBOV_II003900 18.m06325; 26S proteasome AAA-ATPase subunit
RPT4a; K03064 26S proteasome regulatory subunit T4
Length=404
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE +R IL+IH+ K+ K D+++ + R D FNGA ++ VC EAG+ A+R +
Sbjct 320 NESSRVDILKIHSSKLN-KKGDIDYVAICRLCDGFNGADMRNVCTEAGIFAIRAMRDYVV 378
Query 61 HEDFVQGIAAVQAKKK 76
EDF + + KK
Sbjct 379 EEDFFKAARKLTETKK 394
> ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regulatory
subunit T4
Length=399
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE +R IL+IHA + ++++ + + + FNGA L+ +C EAGM A+R +
Sbjct 311 NEQSRMDILKIHAAGIA-KHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVI 369
Query 61 HEDFVQGIAAV-QAKKKSSLNYF 82
HEDF++ + + +AKK S +++
Sbjct 370 HEDFMKAVRKLSEAKKLESSSHY 392
Lambda K H
0.318 0.129 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2044675024
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40