bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0401_orf1
Length=296
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1... 235 1e-61
bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicas... 186 1e-46
tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent... 184 3e-46
pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-... 159 1e-38
cpv:cgd8_800 Prp5p C terminal KH. eIF4A-1-family RNA SFII heli... 159 1e-38
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 133 7e-31
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 133 8e-31
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 129 1e-29
ath:AT3G09620 DEAD/DEAH box helicase, putative 128 3e-29
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 126 9e-29
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 113 8e-25
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 106 1e-22
dre:30116 pl10, etID309900.24, p110, p110a, pl10a, wu:fb43h11,... 103 1e-21
sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 103 1e-21
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 102 2e-21
mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05... 102 2e-21
hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Gl... 102 2e-21
xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypep... 101 4e-21
tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.... 99.8 1e-20
xla:444634 MGC84147 protein 98.6 2e-20
dre:566947 ddx3, fb74g09, wu:fb74g09, zgc:158804; DEAD (Asp-Gl... 98.2 3e-20
dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-As... 98.2 3e-20
dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 96.7 1e-19
xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypep... 96.3 1e-19
tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase ... 95.5 2e-19
sce:YBR237W PRP5, RNA5; Prp5p (EC:3.6.1.-); K12811 ATP-depende... 95.5 2e-19
bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-depe... 95.1 2e-19
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 95.1 3e-19
hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 94.7 4e-19
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 93.6 8e-19
xla:398446 ddx24; DEAD (Asp-Glu-Ala-Asp) box polypeptide 24; K... 90.5 7e-18
pfa:PF14_0437 helicase, putative 90.1 9e-18
hsa:57062 DDX24; DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (EC... 90.1 1e-17
tpv:TP02_0286 ATP-dependent RNA Helicase 88.6 3e-17
hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP... 88.6 3e-17
mmu:27225 Ddx24, 1700055J08Rik, 2510027P10Rik, AI649272; DEAD ... 88.2 3e-17
cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA ... 87.8 5e-17
mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,... 87.4 5e-17
mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183; ... 87.4 6e-17
cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 87.4 6e-17
tgo:TGME49_003220 ATP-dependent RNA helicase, putative 87.4 6e-17
xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His) b... 87.0 7e-17
mmu:67997 Ddx59, 1210002B07Rik, 4833411G06Rik; DEAD (Asp-Glu-A... 86.7 9e-17
cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA he... 86.7 1e-16
dre:100136871 ddx43, zgc:174910; DEAD (Asp-Glu-Ala-Asp) box po... 86.7 1e-16
dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b0... 85.9 2e-16
mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp... 85.1 3e-16
xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypept... 84.7 4e-16
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 84.0 7e-16
pfa:PFE0215w ATP-dependent helicase, putative (EC:3.6.1.3); K0... 84.0 7e-16
> tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1.3.69
3.4.21.72); K12811 ATP-dependent RNA helicase DDX46/PRP5
[EC:3.6.4.13]
Length=1544
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 124/139 (89%), Gaps = 0/139 (0%)
Query 6 NLSYFDLVKRVGLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIK 65
NLSYFDL+ +VG KK+LP VDH + +PPIKKNLY+QVKE+T +KDHEV+A+RKT+GNIK
Sbjct 903 NLSYFDLLMKVGAKKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKTHGNIK 962
Query 66 VRGKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSG 125
VRGKQCPRPI+TF QCGLP+KI+++L LRG +PFP+Q Q IP LMCGRD+IAVAETGSG
Sbjct 963 VRGKQCPRPITTFFQCGLPDKIVKYLTLRGITEPFPIQMQAIPCLMCGRDVIAVAETGSG 1022
Query 126 KTLAYALPLVRHVLSVKRQ 144
KTLAY LPL+RHVLSVK+Q
Sbjct 1023 KTLAYGLPLIRHVLSVKQQ 1041
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 62/73 (84%), Gaps = 0/73 (0%)
Query 222 NFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVV 281
+F++G I LVIAPTREL QI KE++R CKLVDL+ + YGGAGIG QLG I+RGV+V+V
Sbjct 1042 DFRDGAIALVIAPTRELCNQIFKEINRCCKLVDLNAVACYGGAGIGSQLGAIKRGVEVIV 1101
Query 282 GTPGRLIDVLTLN 294
GTPGRLID+LT+N
Sbjct 1102 GTPGRLIDILTMN 1114
> bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=994
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Query 2 EQLANLSYFDLVKRVGLKK-ELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKT 60
E +N+ Y +L K + E+P VDH++ + P KKN YVQ+ +T +K+HEVEA RK
Sbjct 313 EPNSNVDYSELFKGTTRSRIEMPKVDHSTIDYQPFKKNFYVQISAITAMKEHEVEAFRKA 372
Query 61 NGNIKVRGKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVA 120
NGNI+VRGK CPRPI F QCGLP+ IL L+ R +EKPFP+Q QCIP LMCGRD++A+A
Sbjct 373 NGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIA 432
Query 121 ETGSGKTLAYALPLVRHVL 139
ETGSGKT+AY LP +RHVL
Sbjct 433 ETGSGKTMAYLLPAIRHVL 451
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EGMI L+IAPTREL+ QI E S+LCKLV + ++YGG+ IG QL ++RGV++V GTP
Sbjct 460 EGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTP 519
Query 285 GRLIDVLTLNS 295
GRLI+VLT+++
Sbjct 520 GRLIEVLTISN 530
> tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=894
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query 9 YFDLVKRV-GLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVR 67
Y +L+ ++ G KKELP VDH+ + P +KN YVQV +T++ +HEV+A RK NGNI+V
Sbjct 349 YMELLPKIRGGKKELPRVDHSKIDYLPFRKNFYVQVSSITNMGEHEVDAFRKANGNIRVY 408
Query 68 GKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKT 127
GK+CPRPIS+F QCGLP+ IL+ LE R +EKPFP+Q QCIP LMCGRD+I +AETGSGKT
Sbjct 409 GKKCPRPISSFSQCGLPDPILKILEKREYEKPFPIQMQCIPALMCGRDVIGIAETGSGKT 468
Query 128 LAYALPLVRHVL 139
LA+ LP +RHVL
Sbjct 469 LAFLLPGIRHVL 480
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 0/70 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+GMI L+IAPTREL +QIS E ++ K V L ++YGGAGIG QL ++RG ++VVGTP
Sbjct 489 DGMIVLIIAPTRELVIQISNECAKFSKSVGLRTLAVYGGAGIGEQLNALKRGAEIVVGTP 548
Query 285 GRLIDVLTLN 294
GRLIDVLTL+
Sbjct 549 GRLIDVLTLS 558
> pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1490
Score = 159 bits (403), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/122 (59%), Positives = 95/122 (77%), Gaps = 0/122 (0%)
Query 18 LKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPIST 77
+ K+L V+H + PIKKN+YVQVKE+T++KD +V+ RK NGNI VRGK CPRP+
Sbjct 665 MNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQY 724
Query 78 FHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRH 137
F+QCGLP KIL+ LE + F+K + +Q Q IP LMCGRD+IA+AETGSGKTL+Y P++RH
Sbjct 725 FYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRH 784
Query 138 VL 139
VL
Sbjct 785 VL 786
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 55/72 (76%), Gaps = 0/72 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++ PTRELS+Q+ E CK V++ + ++YGG+ I QL +++GV+++VGTP
Sbjct 795 DGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTP 854
Query 285 GRLIDVLTLNSC 296
GR+ID+LT+++C
Sbjct 855 GRIIDILTISNC 866
> cpv:cgd8_800 Prp5p C terminal KH. eIF4A-1-family RNA SFII helicase
Length=934
Score = 159 bits (402), Expect = 1e-38, Method: Composition-based stats.
Identities = 103/289 (35%), Positives = 136/289 (47%), Gaps = 78/289 (26%)
Query 19 KKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQ-------- 70
KK +P ++H +PPI KN Y +V E+ LK HEV+ IR TN I ++ +
Sbjct 151 KKRIPEINHEVINYPPIIKNYYKEVNEIKKLKQHEVDHIRITNNGIHIKKIKNINKTSND 210
Query 71 ------CPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGS 124
+PI F QCGLP I +L+ + KPFP+Q Q IPILM G D+I AETGS
Sbjct 211 LNQPYSSIKPILNFSQCGLPLPIHHYLKKKNIIKPFPIQMQSIPILMSGYDMIGNAETGS 270
Query 125 GKTLAYALPLVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAESQQQQASPGDARPTSSAMD 184
GKTLAY LP L RH Q P +A MD
Sbjct 271 GKTLAYILP--------------------------LIRHVLVQSNNNYPFNAE-----MD 299
Query 185 STAEGKAKQHGSQQAQDSEDKDRFRKNEKGERMLIYGNFKEGMIGLVIAPTRELSLQISK 244
+ KN R +I I PTREL+LQ+ K
Sbjct 300 I---------------------QINKNTNLARAMI------------IIPTRELALQVYK 326
Query 245 EVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRLIDVLTL 293
+ ++L LVDL+ + GG I QL +IR G D+++GTPGR+ID++TL
Sbjct 327 QTTQLANLVDLTTNIICGGLSISHQLNKIRSGSDIIIGTPGRIIDIMTL 375
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 0/121 (0%)
Query 19 KKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTF 78
+K L VDH ++ P +KN YV+V EL + EV R I V+GK CP+PI ++
Sbjct 315 RKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSW 374
Query 79 HQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
QCG+ KIL L+ G+EKP P+Q+Q IP +M GRDLI +A+TGSGKT+A+ LP+ RH+
Sbjct 375 VQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI 434
Query 139 L 139
+
Sbjct 435 M 435
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EG I +++ PTREL+LQI+KE + K + L V +YGG GI Q+ +++RG +++V TP
Sbjct 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query 285 GRLIDVLTLNS 295
GR+ID+L NS
Sbjct 504 GRMIDMLAANS 514
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 0/121 (0%)
Query 19 KKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTF 78
+K L VDH ++ P +KN YV+V EL + EV R I V+GK CP+PI ++
Sbjct 315 RKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSW 374
Query 79 HQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
QCG+ KIL L+ G+EKP P+Q+Q IP +M GRDLI +A+TGSGKT+A+ LP+ RH+
Sbjct 375 VQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI 434
Query 139 L 139
+
Sbjct 435 M 435
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EG I +++ PTREL+LQI+KE + K + L V +YGG GI Q+ +++RG +++V TP
Sbjct 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query 285 GRLIDVLTLNS 295
GR+ID+L NS
Sbjct 504 GRMIDMLAANS 514
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 0/121 (0%)
Query 19 KKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTF 78
+K L VDH ++ P +KN YV+V EL + EV R I V+GK CP+PI T+
Sbjct 283 RKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTW 342
Query 79 HQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
QCG+ K+L L+ +EKP P+Q+Q IP +M GRDLI +A+TGSGKT+A+ LP+ RH+
Sbjct 343 VQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI 402
Query 139 L 139
L
Sbjct 403 L 403
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EG + +++ PTREL+LQI+KE + K + L V +YGG GI Q+ +++RG +++V TP
Sbjct 412 EGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTP 471
Query 285 GRLIDVLTLNS 295
GR+ID+L N+
Sbjct 472 GRMIDMLGANN 482
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
Query 12 LVKRVGLKK--ELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGK 69
+KRV K +L LVDH+ ++ P +KN Y++VK+++ + V A RK +KV GK
Sbjct 331 FMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRK-ELELKVHGK 389
Query 70 QCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLA 129
PRPI +HQ GL KIL L+ +EKP P+Q+Q +PI+M GRD I VA+TGSGKTL
Sbjct 390 DVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLG 449
Query 130 YALPLVRHV 138
+ LP++RH+
Sbjct 450 FVLPMLRHI 458
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G IGLV+APTREL QI ++ + K + + +YGG+G+ Q+ +++RG ++VV TP
Sbjct 468 DGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTP 527
Query 285 GRLIDVLTLNS 295
GR+ID+L +S
Sbjct 528 GRMIDILCTSS 538
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
Query 12 LVKRVGLKK--ELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGK 69
+KRV K +L LVDH+ ++ P +KN Y++VK+++ + EV RK +KV GK
Sbjct 126 FMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRK-ELELKVHGK 184
Query 70 QCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLA 129
PRPI +HQ GL KIL ++ +EKP P+Q+Q +PI+M GRD I VA+TGSGKTL
Sbjct 185 DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLG 244
Query 130 YALPLVRHV 138
+ LP++RH+
Sbjct 245 FVLPMLRHI 253
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G IGLV+APTREL QI ++ + K + + +YGG+G+ Q+ +++RG ++VV TP
Sbjct 263 DGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTP 322
Query 285 GRLIDVLTLNS 295
GR+ID+L +S
Sbjct 323 GRMIDILCTSS 333
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 0/118 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
L DH+ + KKN Y++ +E+ + EV+A R+ +I V+G CP+PI T+ QC
Sbjct 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVL 139
G+ K++ L+ + KP +Q+Q IP +M GRD+I +A+TGSGKTLA+ LP+ RH+L
Sbjct 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL 367
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++APTREL++Q KE ++ K + L V YGG GI Q+ ++RG ++VV TP
Sbjct 376 DGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTP 435
Query 285 GRLIDVLTLNS 295
GR+IDVL NS
Sbjct 436 GRMIDVLAANS 446
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query 34 PIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRHLEL 93
P +KN YV+ + + D EVE RK I V GK P+P+ +F G P+ +L ++
Sbjct 58 PFEKNFYVESPAVAAMTDTEVEEYRKLR-EITVEGKDIPKPVKSFRDVGFPDYVLEEVKK 116
Query 94 RGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
GF +P P+QSQ P+ M GRDLI +AETGSGKTL+Y LP + HV
Sbjct 117 AGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV 161
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query 217 MLIYGNFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRG 276
ML +G +G I LV+APTREL++QI +E S+ + +YGG G Q+ +++G
Sbjct 166 MLAHG---DGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKG 222
Query 277 VDVVVGTPGRLIDVLTLNSC 296
V++V+ TPGRLID++ N+
Sbjct 223 VEIVIATPGRLIDMMESNNT 242
> dre:30116 pl10, etID309900.24, p110, p110a, pl10a, wu:fb43h11,
wu:fy72b06; pl10; K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=688
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 60/228 (26%)
Query 64 IKVRGKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETG 123
++ G P+PI FH + E I+ ++ L + +P PVQ IPI+ RDL+A A+TG
Sbjct 196 VEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTG 255
Query 124 SGKTLAYALPLVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAESQQQQASPGDARPTSSAM 183
SGKT A+ LP++ SQ PG+A
Sbjct 256 SGKTAAFLLPVL------------------------------SQIYTDGPGEAL------ 279
Query 184 DSTAEGKAKQHGSQQAQDSEDKDRFRKNEKGERMLIYGNFKEGMIGLVIAPTRELSLQIS 243
A+ A+++G YG K+ I LV+APTREL+LQI
Sbjct 280 -QAAKNSAQENGK-----------------------YGRRKQYPISLVLAPTRELALQIY 315
Query 244 KEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRLIDVL 291
E + + +YGGA IG Q+ + RG ++V TPGRL+D++
Sbjct 316 DEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMM 363
> sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=546
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query 23 PLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCG 82
P D K P +KN YV+ + + D D E+ RK N + + G P+PI+TF + G
Sbjct 61 PNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKEN-EMTISGHDIPKPITTFDEAG 119
Query 83 LPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
P+ +L ++ GF+KP +Q Q P+ + GRD++ +A TGSGKTL+Y LP + H+
Sbjct 120 FPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHI 175
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 0/69 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL++QI E S+ + +YGG Q+ + RG ++V+ TP
Sbjct 185 DGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATP 244
Query 285 GRLIDVLTL 293
GRLID+L +
Sbjct 245 GRLIDMLEI 253
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query 25 VDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLP 84
+DH+S + PI K+ Y +++ ++ + + E R+ G I+V G RP+ TF CG
Sbjct 178 LDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLG-IRVSGFDVHRPVKTFEDCGFS 236
Query 85 EKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVL 139
+I+ ++ + +EKP +Q Q +PI++ GRD+I +A+TGSGKT A+ LP++ H++
Sbjct 237 SQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIM 291
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 0/71 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EG IG++ APTREL+ QI E + K L V ++YGG Q +++ G ++VV TP
Sbjct 300 EGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATP 359
Query 285 GRLIDVLTLNS 295
GRLID+L + +
Sbjct 360 GRLIDMLKMKA 370
> mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05Rik,
RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase
DDX42 [EC:3.6.4.13]
Length=929
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
LP +DH+ +PP +KN Y + +E+T+L ++ +R N++V G PRP S+F
Sbjct 200 LPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHF 258
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
G E+++ + + +P P+Q Q +P+ + GRD+I +A+TGSGKT A+ P++ H++
Sbjct 259 GFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQ 318
Query 142 K 142
K
Sbjct 319 K 319
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++ PTREL QI E R K +L ++YGG + Q ++ G ++VV TP
Sbjct 325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384
Query 285 GRLID 289
GRLID
Sbjct 385 GRLID 389
> hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.4.13); K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=938
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
LP +DH+ +PP +KN Y + +E+T+L ++ +R N++V G PRP S+F
Sbjct 200 LPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHF 258
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
G E+++ + + +P P+Q Q +P+ + GRD+I +A+TGSGKT A+ P++ H++
Sbjct 259 GFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQ 318
Query 142 K 142
K
Sbjct 319 K 319
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++ PTREL QI E R K +L ++YGG + Q ++ G ++VV TP
Sbjct 325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384
Query 285 GRLID 289
GRLID
Sbjct 385 GRLID 389
> xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17; K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13]
Length=610
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + E+ + H+VE +R+ I +RG CP+P+ FHQ P+ +L
Sbjct 38 ELPKFEKNFYTEHPEVARMTQHDVEELRRKK-EITIRGVNCPKPLYAFHQANFPQYVLDV 96
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSVKRQYKEYLA 150
L + F++P P+Q Q P+ + GRD++ +A+TGSGKTLAY LP + H+ ++ YL
Sbjct 97 LLDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAMVHI-----NHQPYLE 151
Query 151 KQKEEKLLSLQRHAESQQQQASPGDARPTSSAMDST 186
+ L L E QQ D +S + ST
Sbjct 152 RGDGPICLVLAPTRELAQQVQQVADDYGKTSRLKST 187
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + K L +YGGA G Q+ + RGV++ + TP
Sbjct 154 DGPICLVLAPTRELAQQVQQVADDYGKTSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 213
Query 285 GRLIDVL 291
GRLID L
Sbjct 214 GRLIDFL 220
> tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=550
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 0/122 (0%)
Query 17 GLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPIS 76
L +L VD + P +KN YV+ + ++ E E IR+ N V G P+P+
Sbjct 70 ALGSKLQRVDWKTIDLVPFEKNFYVEHPAVANMSAEEAERIRRANEITIVHGHNVPKPVP 129
Query 77 TFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVR 136
TF P IL + GF+KP +Q Q PI + GRD+I +AETGSGKTLA+ LP +
Sbjct 130 TFEYTSFPSYILDVINQTGFQKPTAIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIV 189
Query 137 HV 138
H+
Sbjct 190 HI 191
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 0/72 (0%)
Query 220 YGNFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDV 279
Y N +G I L++APTREL QI + + YGG Q+ ++ RG ++
Sbjct 196 YLNKGDGPIVLILAPTRELVEQIRAQCRTFAASSKIHHAVAYGGVPKRPQIMELERGAEI 255
Query 280 VVGTPGRLIDVL 291
V PGRLID L
Sbjct 256 CVACPGRLIDFL 267
> xla:444634 MGC84147 protein
Length=450
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
LP +DH ++PP +KN Y + +E+T ++ +R N++V G PR S+F
Sbjct 198 LPPIDHTEIEYPPFEKNFYEEHEEITSQTPQQITELRH-KLNLRVSGAAAPRLCSSFAHF 256
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
G E+++ + + KP P+Q Q IP+ + GRD+I +A+TGSGKT A+ P++ H++
Sbjct 257 GFDEQLMHQIRKSEYTKPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQ 316
Query 142 K 142
K
Sbjct 317 K 317
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++ PTREL QI E R K +L ++YGG + Q ++ G ++VV TP
Sbjct 323 DGPIAVIVCPTRELCQQIHNECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 382
Query 285 GRLID 289
GRLID
Sbjct 383 GRLID 387
> dre:566947 ddx3, fb74g09, wu:fb74g09, zgc:158804; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 3; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=709
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 59/228 (25%)
Query 64 IKVRGKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETG 123
++ G P I +FH + E I+ ++ L + +P PVQ IPI+ RDL+A A+TG
Sbjct 211 VEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTG 270
Query 124 SGKTLAYALPLVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAESQQQQASPGDARPTSSAM 183
SGKT A+ LP++ + S PG+A + A
Sbjct 271 SGKTAAFLLPVLSQIYS------------------------------EGPGEALQATKAS 300
Query 184 DSTAEGKAKQHGSQQAQDSEDKDRFRKNEKGERMLIYGNFKEGMIGLVIAPTRELSLQIS 243
GK Y K+ I LV+APTREL+LQI
Sbjct 301 TQQENGK-----------------------------YVRRKQYPISLVLAPTRELALQIY 331
Query 244 KEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRLIDVL 291
E + + +YGGA IG Q+ + RG ++V TPGRL+D++
Sbjct 332 DEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM 379
> dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.1.-); K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=908
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
LP +DH+ + P +KN Y + +E++ L EV +R+ N+KV G P+P ++F
Sbjct 202 LPPIDHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRR-KLNLKVSGAAPPKPATSFAHF 260
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
G E+++ + + +P P+Q Q +PI + GRD I +A+TGSGKT A+ P++ H++
Sbjct 261 GFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQ 320
Query 142 K 142
K
Sbjct 321 K 321
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 0/65 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
EG I +++ PTREL QI E R K L ++YGG + Q ++ G ++VV TP
Sbjct 327 EGPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 386
Query 285 GRLID 289
GRLID
Sbjct 387 GRLID 391
> dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=671
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + E+ + ++VE R+ I VRG CP+P++ FHQ P+ ++
Sbjct 51 QLPKFEKNFYNENPEVHHMSQYDVEEYRRKR-EITVRGSGCPKPVTNFHQAQFPQYVMDV 109
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
L + F++P +Q+Q P+ + GRD++ +A+TGSGKTLAY LP + H+
Sbjct 110 LLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 157
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 0/69 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + K + +YGGA G Q+ + RGV++ + TP
Sbjct 167 DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATP 226
Query 285 GRLIDVLTL 293
GRLID L +
Sbjct 227 GRLIDFLEV 235
> xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase DDX42
[EC:3.6.4.13]
Length=947
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQC 81
LP +DH ++PP +KN Y + + +T ++ +R N++V G PR S+F
Sbjct 197 LPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHKL-NLRVSGAAPPRLCSSFAHF 255
Query 82 GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
G E++L + + +P P+Q Q IP+ + GRD+I +A+TGSGKT A+ P++ H++
Sbjct 256 GFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQ 315
Query 142 K 142
K
Sbjct 316 K 316
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I +++ PTREL QI E R K +L ++YGG + Q ++ G ++VV TP
Sbjct 322 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 381
Query 285 GRLID 289
GRLID
Sbjct 382 GRLID 386
> tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase
DDX5/DBP2 [EC:3.6.4.13]
Length=635
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 0/104 (0%)
Query 35 IKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRHLELR 94
+KN YV+ E+ + E + IR+ V G+ P+P+ F P IL +E
Sbjct 169 FEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSIEAA 228
Query 95 GFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
GF++P P+Q Q PI + GRD+I +AETGSGKTLA+ LP + H+
Sbjct 229 GFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIVHI 272
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ QI + + L YGG Q +RRGV++++ P
Sbjct 282 DGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACP 341
Query 285 GRLIDVL 291
GRLID L
Sbjct 342 GRLIDFL 348
> sce:YBR237W PRP5, RNA5; Prp5p (EC:3.6.1.-); K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=849
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query 34 PIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLP-EKILRHLE 92
P +KN Y++ + ++ + + EVE +R + NIK++G CP+P++ + Q GL + ++ E
Sbjct 213 PFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITE 272
Query 93 LRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
F P+QSQ +P +M GRD+I +++TGSGKT++Y LPL+R V
Sbjct 273 KLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQV 318
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Query 226 GMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSL--YGGAGIGGQLGQIRRGVDVVVGT 283
G +GL++APTREL+LQI +EV++ + D S+ S+ GG+ + Q+ ++RG ++VV T
Sbjct 330 GPMGLILAPTRELALQIHEEVTKFTE-ADTSIRSVCCTGGSEMKKQITDLKRGTEIVVAT 388
Query 284 PGRLIDVLTLN 294
PGR ID+LTLN
Sbjct 389 PGRFIDILTLN 399
> bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=529
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 0/122 (0%)
Query 17 GLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPIS 76
L L +D + +KN Y + E++ + +V+ +RK + G+ P+P+
Sbjct 49 ALGSRLSTIDWSKETLVAFEKNFYKEHSEVSAMSSADVDRVRKEREITIIAGRDVPKPVV 108
Query 77 TFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVR 136
+F P+ IL+ + GF P P+Q Q PI + GRD+I +AETGSGKTLA+ LP V
Sbjct 109 SFEHTSFPDYILKAIRAAGFTAPTPIQVQGWPIALSGRDVIGIAETGSGKTLAFLLPAVV 168
Query 137 HV 138
H+
Sbjct 169 HI 170
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 0/70 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL QI ++ + + YGG Q+ +++RGV++++ P
Sbjct 180 DGPIVLVLAPTRELVEQIRQQCVQFGASSRIKSSVAYGGVPKRQQMYELKRGVEILLACP 239
Query 285 GRLIDVLTLN 294
GRLID L N
Sbjct 240 GRLIDFLESN 249
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQ-CPRPISTFHQCGLPEKILR 89
+ P +KN YV+ E+ L +EV+ +R+ I VRG CP+P+ FH P+ ++
Sbjct 47 ELPKFEKNFYVEHPEVARLTPYEVDELRRKK-EITVRGGDVCPKPVFAFHHANFPQYVMD 105
Query 90 HLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
L + F +P P+Q Q P+ + GRD++ +A+TGSGKTLAY LP + H+
Sbjct 106 VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + K L +YGGA G Q+ + RGV++ + TP
Sbjct 164 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 223
Query 285 GRLIDVL 291
GRLID L
Sbjct 224 GRLIDFL 230
> hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=731
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQ-CPRPISTFHQCGLPEKILR 89
+ P +KN YV+ E+ L +EV+ +R+ I VRG CP+P+ FH P+ ++
Sbjct 126 ELPKFEKNFYVEHPEVARLTPYEVDELRRKK-EITVRGGDVCPKPVFAFHHANFPQYVMD 184
Query 90 HLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
L + F +P P+Q Q P+ + GRD++ +A+TGSGKTLAY LP + H+
Sbjct 185 VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 233
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + K L +YGGA G Q+ + RGV++ + TP
Sbjct 243 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 302
Query 285 GRLIDVL 291
GRLID L
Sbjct 303 GRLIDFL 309
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query 35 IKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRHLELR 94
+KN YV+ + + + +V A+ +T +I V G+ P+P+ F P+ IL +
Sbjct 125 FEKNFYVESPTVQAMTEQDV-AMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKL 183
Query 95 GFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSVKR 143
GF +P P+Q+Q P+ + GRDLI +AETGSGKTLAY LP + HV + R
Sbjct 184 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPR 232
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I L++APTREL++QI +E + + +YGGA G Q+ +RRGV++V+ TP
Sbjct 237 DGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATP 296
Query 285 GRLIDVL 291
GRLID+L
Sbjct 297 GRLIDML 303
> xla:398446 ddx24; DEAD (Asp-Glu-Ala-Asp) box polypeptide 24;
K14805 ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13]
Length=706
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query 75 ISTFHQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGR-DLIAVAETGSGKTLAYALP 133
+S + +P+ +L+ L GF P P+Q+ +P + + D++ AETGSGKTLA+A+P
Sbjct 108 VSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIP 167
Query 134 LVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAESQQQQASPGDARPTSSAMDSTAEGKAKQ 193
++ +L ++ ++E A AE + ++ D A + + ++
Sbjct 168 MIHSILEWQK-HQESGA-------------AEGETKEEPTSDVNNEIDATEKQEQDMSEN 213
Query 194 HGSQQAQDSED-KDRFRKNEKGERMLIYGNF--KEGMIGLVIAPTRELSLQISKEVSRLC 250
+Q +D++D + F N G + + ++GLV+ PTREL++Q+ + +
Sbjct 214 EDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAVA 273
Query 251 KLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRLIDVL 291
K + + GG Q + R ++V+ TPGRL +++
Sbjct 274 KFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELI 314
> pfa:PF14_0437 helicase, putative
Length=527
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 0/121 (0%)
Query 20 KELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFH 79
K L +D + P +KN Y + ++++ L EV+ IR + + G+ P+P+ + +
Sbjct 57 KNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSIN 116
Query 80 QCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVL 139
+ G P+ +++ L+ P P+Q Q PI + G+D+I AETGSGKTLA+ LP H+L
Sbjct 117 KIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHIL 176
Query 140 S 140
+
Sbjct 177 A 177
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 0/72 (0%)
Query 223 FKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVG 282
+ +G I LV+APTREL+ QI +E + + YGG GQ+ +++GV +++
Sbjct 183 YGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIA 242
Query 283 TPGRLIDVLTLN 294
PGRLID+L N
Sbjct 243 CPGRLIDLLEQN 254
> hsa:57062 DDX24; DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (EC:3.6.4.13);
K14805 ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13]
Length=859
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 115/264 (43%), Gaps = 49/264 (18%)
Query 75 ISTFHQCGLPEKILRHLELRGFEKPFPVQSQCI-PILMCGRDLIAVAETGSGKTLAYALP 133
+S + +P +LR L GF P P+Q+ + P + D++ AETGSGKTLA+A+P
Sbjct 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query 134 LVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAESQQQQASPGDARPTSSAM---------- 183
++ VL +++ E + E+ + SPG A S A+
Sbjct 251 MIHAVLQWQKRNAAPPPSNTEAP--PGETRTEAGAETRSPGKAEAESDALPDDTVIESEA 308
Query 184 ---DSTAEGKAKQHG--SQQAQDSEDKDR-------------FRKNEKGERMLI---YGN 222
D AE +AK G S QA D D ++NE E L GN
Sbjct 309 LPSDIAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGN 368
Query 223 FKE---------------GMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIG 267
K+ ++GLV+ PTREL++Q+ + + + + + L GG
Sbjct 369 LKQELDDKSATCKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQ 428
Query 268 GQLGQIRRGVDVVVGTPGRLIDVL 291
Q + R ++VV TPGRL +++
Sbjct 429 KQQRMLNRRPEIVVATPGRLWELI 452
> tpv:TP02_0286 ATP-dependent RNA Helicase
Length=623
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query 37 KNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCG--LPEKILRHLELR 94
KN+Y+ +E+ + E +K NI+ G + P+PIS+F +P IL +E
Sbjct 93 KNIYIPDEEVESMSLEECVNFKK-RFNIETFGTRVPKPISSFIHLSKSIPTTILNRIEKM 151
Query 95 GFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSVKRQYKEYLAKQKE 154
GF +P PVQSQ IP ++ GR+ I ++ETGSGKT++Y +P+V VL + +Q+K K+
Sbjct 152 GFYEPTPVQSQVIPCILQGRNTIILSETGSGKTISYLIPIVVKVLDLIKQWKSVSGKKNV 211
Query 155 EKL-LSLQRHAESQ 167
L L+L R +Q
Sbjct 212 YALILTLTRELCNQ 225
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 0/69 (0%)
Query 224 KEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGT 283
K+ + L++ TREL Q+ + +LCK ++L + + G + G ++ + T
Sbjct 208 KKNVYALILTLTRELCNQVYSLLQKLCKGINLRITLITAGVDKTEMFRSVYNGCEIAICT 267
Query 284 PGRLIDVLT 292
P RL+D+++
Sbjct 268 PQRLVDMIS 276
> hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP68,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=614
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + +L EVE R++ I VRG CP+P+ F++ P ++
Sbjct 50 ELPKFEKNFYQEHPDLARRTAQEVETYRRSK-EITVRGHNCPKPVLNFYEANFPANVMDV 108
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
+ + F +P +Q+Q P+ + G D++ VA+TGSGKTL+Y LP + H+
Sbjct 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI 156
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + + C+ L +YGGA G Q+ + RGV++ + TP
Sbjct 166 DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATP 225
Query 285 GRLIDVL 291
GRLID L
Sbjct 226 GRLIDFL 232
> mmu:27225 Ddx24, 1700055J08Rik, 2510027P10Rik, AI649272; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 24 (EC:3.6.4.13); K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13]
Length=903
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 44/261 (16%)
Query 75 ISTFHQCGLPEKILRHLELRGFEKPFPVQSQCI-PILMCGRDLIAVAETGSGKTLAYALP 133
+S + +P+ +LR L GF P P+Q+ + P + D++ AETGSGKTLA+A+P
Sbjct 238 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 297
Query 134 LVRHVLSVKRQYKEYLAK-----------------------QKEEKLLSLQRHAESQQQQ 170
++ VL + + + + E +L + E++ Q
Sbjct 298 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 357
Query 171 ASPG-DARPTSSAM----------DSTAEGKAKQHGSQQAQDSED-KDRFRKNEKG---- 214
+ G A P +SA D EG + + +ED +++F + G
Sbjct 358 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 417
Query 215 ---ERMLIYG-NFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQL 270
+++ IY + + ++GLV+ PTREL++Q+ + + + K ++ L GG Q
Sbjct 418 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQ 477
Query 271 GQIRRGVDVVVGTPGRLIDVL 291
+ R ++V+ TPGRL +++
Sbjct 478 RMLNRHPEIVIATPGRLWELV 498
> cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=586
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 0/114 (0%)
Query 25 VDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLP 84
+D S P +KN Y + + ++ L + +V+ IRK + G+ P+PI++F G P
Sbjct 117 LDWGSQNLIPFEKNFYHEHESVSSLSNEQVDQIRKERKITIIAGENVPKPITSFVTSGFP 176
Query 85 EKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
++ L GF +P +Q Q P+ + G D+I +AETGSGKTL + LP + H+
Sbjct 177 NFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMIHI 230
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query 213 KGERMLIYGNFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQ 272
+ + +L YG +G I LV+APTREL QI ++ ++ + L ++YGG Q
Sbjct 231 RAQPLLRYG---DGPICLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQAS 287
Query 273 IRRGVDVVVGTPGRLIDVL 291
IR GV++ + PGRLID+L
Sbjct 288 IRNGVEICIACPGRLIDLL 306
> mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=615
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + +L EV+ R++ I VRG CP+P+ F++ P ++
Sbjct 50 ELPKFEKNFYQEHPDLARRTAQEVDTYRRSK-EITVRGHNCPKPVLNFYEANFPANVMDV 108
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
+ + F +P +Q+Q P+ + G D++ VA+TGSGKTL+Y LP + H+
Sbjct 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI 156
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + + C+ L +YGGA G Q+ + RGV++ + TP
Sbjct 166 DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATP 225
Query 285 GRLIDVL 291
GRLID L
Sbjct 226 GRLIDFL 232
> mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183;
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=670
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + +L EV+ R++ I VRG CP+P+ F++ P ++
Sbjct 105 ELPKFEKNFYQEHPDLARRTAQEVDTYRRSK-EITVRGHNCPKPVLKFYEANFPANVMDV 163
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVL 139
+ + F +P +Q+Q P+ + G D++ VA+TGSGKTL+Y LP + H++
Sbjct 164 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHII 212
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + + C+ L +YGGA G Q+ + RGV++ + TP
Sbjct 221 DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATP 280
Query 285 GRLIDVL 291
GRLID L
Sbjct 281 GRLIDFL 287
> cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member
(ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=730
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query 40 YVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRHLELRGFEKP 99
+ ++KEL+++ D + R+ + NI ++G + PRP+ + + G P+++ + ++ G+ +P
Sbjct 266 HWRMKELSEMSDRDWRIFRE-DFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEP 324
Query 100 FPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSV 141
P+Q Q IPI + RD+I VAETGSGKT A+ LPL+ + S+
Sbjct 325 TPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 366
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query 226 GMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPG 285
G +++APTREL+ QI +E ++ KL+ + S+ GGA Q ++R GV+VV+ TPG
Sbjct 378 GPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPG 437
Query 286 RLIDVLT-----LNSC 296
RL+DVL LN C
Sbjct 438 RLLDVLENRYLLLNQC 453
> tgo:TGME49_003220 ATP-dependent RNA helicase, putative
Length=774
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query 20 KELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFH 79
K+L VDH+ +P ++++Y + ++ L HE + + I++ G PRPI++F
Sbjct 146 KQLASVDHSILVYPEFQRDIYKEAADIGSL-SHEAVGELRASLQIRITGLNAPRPIASFL 204
Query 80 QC--GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRH 137
L + + + RGF P P+QS IP LM GRD++ +AETGSGKT AY +PL+
Sbjct 205 HLKDSLSKALFTGINKRGFTLPTPIQSAAIPCLMRGRDVLGLAETGSGKTAAYLIPLLAR 264
Query 138 VLSVKRQYK 146
+ +K + +
Sbjct 265 LQHLKEEER 273
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query 226 GMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGS---------LYGGAGIGGQLGQIRRG 276
G +V+ PTREL++QI EV L L G+ L GG G Q ++ G
Sbjct 297 GPAAIVLCPTRELAVQIDGEVHSL--LAKAKAGASPLPLKHVLLAGGFDKGEQFKSLKAG 354
Query 277 VDVVVGTPGRLIDVLTL 293
VD+ V PGRLID+ T+
Sbjct 355 VDLAVANPGRLIDLATM 371
> xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 5 (RNA helicase, 68kDa); K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=607
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y ++ +++ E + R++ I VRG CP+P+ FH+ P ++
Sbjct 46 ELPKFEKNFYQELPDVSRRTPQECDQYRRSK-EITVRGLNCPKPVLNFHEASFPANVMEV 104
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
++ F +P P+Q Q P+ + G D++ VA TGSGKTL+Y LP + H+
Sbjct 105 IKRLNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHI 152
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + + + L +YGGA G Q+ + RGV++ + TP
Sbjct 162 DGPILLVLAPTRELAQQVQQVAAEYGRACRLRTTCIYGGAPKGPQIRDLERGVEICIATP 221
Query 285 GRLIDVL-----TLNSC 296
GRLID L LN C
Sbjct 222 GRLIDFLEAGKTNLNRC 238
> mmu:67997 Ddx59, 1210002B07Rik, 4833411G06Rik; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 59 (EC:3.6.4.13)
Length=619
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Query 46 LTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRHLELRGFEKPFPVQSQ 105
+ LK+ ++E +++ G I V+G+ RPI F CG PE + ++L+ G+E P P+Q Q
Sbjct 174 IVTLKEDQIETLKQQLG-ISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQ 232
Query 106 CIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSVKRQYKEYLAKQKEEKLLSLQRHAE 165
IP+ + GRD++A A+TGSGKT A+ LP++ S + + E + ++R A+
Sbjct 233 MIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKTPSALILTPTRELAIQIERQAK 292
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query 229 GLVIAPTRELSLQISKEVSRLCK-LVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRL 287
L++ PTREL++QI ++ L L + L GG + QL ++R+ V V++ TPGRL
Sbjct 274 ALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRL 333
Query 288 IDVLTLNS 295
+D++ +S
Sbjct 334 LDIIKQSS 341
> cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=811
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query 22 LPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNG-NIKVRGKQCPRPISTFHQ 80
LP +DH+ ++ KN Y + +++ L H ++ IR N N++V G + PRP+ +F
Sbjct 212 LPDIDHSQIQYQKFNKNFYEEHEDIKRL--HYMDVIRLQNTMNLRVGGLKPPRPVCSFAH 269
Query 81 CGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVL 139
+ ++ + +E+P P+Q+ IP + GRD++ +A+TGSGKT AY P + H++
Sbjct 270 FSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIM 328
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRR-GVDVVVGT 283
EG + +++ PTREL++Q+ +E + CK+ +++ YGG Q +++ G ++VV T
Sbjct 337 EGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCT 396
Query 284 PGRLIDVLTLNSC 296
PGR+ID++ + +
Sbjct 397 PGRIIDLVKMGAT 409
> dre:100136871 ddx43, zgc:174910; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43
Length=405
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 15/118 (12%)
Query 32 FPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRG------KQCPRPISTF-----HQ 80
P +KKN Y++ K + EV+ RK N NI V + P P+ TF H
Sbjct 227 LPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHY 286
Query 81 CGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
G+ E I+R GF+KP P+QSQ P+++ G DLI +A+TG+GKTLAY LP H+
Sbjct 287 PGIMENIVR----VGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHM 340
> dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b05;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.1.-);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=518
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + ++ EVE R++ I V+G+ P+PI FH+ P+ ++
Sbjct 52 ELPKFEKNFYQENPDVARRSAQEVEHYRRSK-EITVKGRDGPKPIVKFHEANFPKYVMDV 110
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
+ + + P P+Q+Q P+ + G+D++ +A+TGSGKTL+Y LP + H+
Sbjct 111 ITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHI 158
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 0/67 (0%)
Query 225 EGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTP 284
+G I LV+APTREL+ Q+ + + K + +YGGA G Q+ + RGV++ + TP
Sbjct 168 DGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPQGPQIRDLERGVEICIATP 227
Query 285 GRLIDVL 291
GRLID L
Sbjct 228 GRLIDFL 234
> mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=646
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query 10 FDLVKRVGLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKV--- 66
+D ++ LK E PPIKKN Y++ + + +++ RK N NI
Sbjct 171 WDQIREDALKWE----KKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNITCDDL 226
Query 67 ---RGKQCPRPISTFHQC--GLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVAE 121
+ P PI F PE ++ +++ GF+KP P+QSQ PI++ G DLI VA+
Sbjct 227 KDGEKRPIPNPICKFEDAFQSYPE-VMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQ 285
Query 122 TGSGKTLAYALPLVRHVLS 140
TG+GKTL+Y +P H+ S
Sbjct 286 TGTGKTLSYLMPGFIHLDS 304
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query 230 LVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVVGTPGRLID 289
LV+ PTREL+LQ+ E S+ DL +YGG GQ+ + +GVD+++ TPGRL D
Sbjct 318 LVLTPTRELALQVEAECSKYS-YGDLKSVCVYGGGDRDGQIQDVSKGVDIIIATPGRLND 376
Query 290 VLTLNS 295
L +N+
Sbjct 377 -LQMNN 381
> xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypeptide
5; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=608
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query 31 KFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPISTFHQCGLPEKILRH 90
+ P +KN Y + ++ E + R++ I VRG CP+PI F++ P ++
Sbjct 48 ELPKFEKNFYQEHPDVVRRTPQECDQYRRSK-EITVRGINCPKPILNFNEASFPANVMEA 106
Query 91 LELRGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHV 138
++ + F +P P+Q Q P+ + G D++ VA TGSGKTL+Y LP + H+
Sbjct 107 IKRQNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHI 154
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query 225 EGMIGLVIAPTRELSLQI---SKEVSRLCKLVDLSVGSLYGGAGIGGQLGQIRRGVDVVV 281
+G I LV+APTREL+ Q+ + E R C+L + YGGA G Q+ + RGV++ +
Sbjct 164 DGPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCI---YGGAPKGPQIRDLERGVEICI 220
Query 282 GTPGRLIDVL-----TLNSC 296
TPGRLID L LN C
Sbjct 221 ATPGRLIDFLEAGKTNLNRC 240
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 15/139 (10%)
Query 10 FDLVKRVGLKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKV--- 66
+D ++ GLK + PPIKKN Y + + + E ++ RK N NI
Sbjct 173 WDQIREEGLKWQ----KTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDL 228
Query 67 ---RGKQCPRPISTF---HQCGLPEKILRHLELRGFEKPFPVQSQCIPILMCGRDLIAVA 120
+ P P TF QC PE ++ +++ GF+KP P+QSQ PI++ G DLI VA
Sbjct 229 KDGEKRPIPNPTCTFDDAFQC-YPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVA 286
Query 121 ETGSGKTLAYALPLVRHVL 139
+TG+GKTL Y +P H++
Sbjct 287 QTGTGKTLCYLMPGFIHLV 305
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query 230 LVIAPTRELSLQISKEVSRLCKLVDLSVGSL--YGGAGIGGQLGQIRRGVDVVVGTPGRL 287
LV+ PTREL+LQ+ E CK + S+ YGG Q+ ++++GVD+++ TPGRL
Sbjct 320 LVLTPTRELALQVEGEC---CKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRL 376
Query 288 IDVLTLN 294
D+ N
Sbjct 377 NDLQMSN 383
> pfa:PFE0215w ATP-dependent helicase, putative (EC:3.6.1.3);
K01509 adenosinetriphosphatase [EC:3.6.1.3]
Length=755
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 36/196 (18%)
Query 94 RGFEKPFPVQSQCIPILMCGRDLIAVAETGSGKTLAYALPLVRHVLSVKRQYKEYLAKQK 153
+G + +QSQ + G+D+I +ETGSGKTLA+ALPLV + +K +++
Sbjct 161 KGIKYMTKIQSQSFKPIYEGKDIIGRSETGSGKTLAFALPLVEKLYKMKTSNEKF----- 215
Query 154 EEKLLSLQRHAESQQQQASPGDARPTSSAMDSTAEGKAKQHGSQQAQDSEDKDRFRKNEK 213
EE+ S H E Q++ + S GK Q+ R++ K
Sbjct 216 EEENGS---HEEDQKKNIYDDVDNDNNYDNFSY--GKKYQN--------------REHNK 256
Query 214 GERMLIYGNFKEGMIGLVIAPTRELSLQISKEVSRLCKLVDLSVGSLYGGAGIGGQLGQI 273
+L V+ PTRELS Q+ + + + ++ S+YGG Q ++
Sbjct 257 DPSIL------------VLEPTRELSKQVENTFKEISQFYNFNIMSIYGGESYTYQENKL 304
Query 274 RRGVDVVVGTPGRLID 289
R+G+D++ GTPGR+ID
Sbjct 305 RKGIDILTGTPGRIID 320
Lambda K H
0.317 0.136 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 11711201824
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40