bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0458_orf4
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_066060 40S ribosomal protein S0-A, putative ; K0299... 368 1e-101
pfa:PF10_0264 40S ribosomal protein S2B, putative; K02998 smal... 347 3e-95
bbo:BBOV_III008460 17.m07741; 40S ribosomal protein S2; K02998... 310 6e-84
tpv:TP04_0748 40S ribosomal protein SA; K02998 small subunit r... 305 1e-82
cpv:cgd3_2090 40S ribosomal protein SAe ; K02998 small subunit... 301 1e-81
ath:AT3G04770 RPSAb; RPSAb (40S ribosomal protein SA B); struc... 266 5e-71
mmu:636901 40S ribosomal protein SA-like 264 3e-70
ath:AT1G72370 P40; P40; structural constituent of ribosome 263 5e-70
xla:100037080 hypothetical protein LOC100037080; K02998 small ... 261 2e-69
mmu:16785 Rpsa, 67kDa, 67lr, AL022858, Lamr, Lamr1, Lamrl1, MG... 261 2e-69
mmu:100505031 40S ribosomal protein SA-like; K02998 small subu... 261 2e-69
xla:380422 rpsa, 37lrp, MGC53465, lambr, lamr1, lrp, p40; ribo... 261 2e-69
xla:733335 rpsa, 37LRP, 67LR, LBP/p40, LRP/LR, LamR; 67kD lami... 260 3e-69
hsa:3921 RPSA, 37LRP, 67LR, LAMBR, LAMR1, LBP, LRP, p40; ribos... 260 5e-69
dre:394027 rpsa, MGC55831, lamr1, zgc:55831, zgc:77824; riboso... 259 9e-69
dre:550536 zgc:110181 248 2e-65
sce:YGR214W RPS0A, NAB1, NAB1A, YST1; Rps0ap; K02998 small sub... 236 1e-61
sce:YLR048W RPS0B, NAB1B, YST2; Rps0bp; K02998 small subunit r... 234 3e-61
cel:B0393.1 rps-0; Ribosomal Protein, Small subunit family mem... 227 5e-59
sce:YHL004W MRP4; Mitochondrial ribosomal protein of the small... 78.2 3e-14
ath:AT3G03600 RPS2; RPS2 (RIBOSOMAL PROTEIN S2); structural co... 53.1 1e-06
xla:443704 mrps2; mitochondrial ribosomal protein S2 49.7 1e-05
ath:ArthCp011 rps2; 30S ribosomal protein S2; K02967 small sub... 49.3 2e-05
xla:733351 hypothetical protein LOC733351 48.9 2e-05
mmu:118451 Mrps2, 1500019M10Rik; mitochondrial ribosomal prote... 47.8 5e-05
eco:b0169 rpsB, ECK0168, JW0164; 30S ribosomal subunit protein... 46.2 1e-04
hsa:51116 MRPS2, MRP-S2, S2mt; mitochondrial ribosomal protein S2 40.4 0.007
tgo:TGME49_007750 hypothetical protein 35.8 0.21
cel:T23B12.3 hypothetical protein 35.0 0.34
pfa:PFD0775c RNA binding protein, putative 33.1 1.2
mmu:80280 Cdk5rap3, 1810007E24Rik, BC002318, C53, C81486, HSF-... 31.2 4.6
ath:AT2G40030 NRPD1B; NRPD1B; DNA binding / DNA-directed RNA p... 30.4 8.0
> tgo:TGME49_066060 40S ribosomal protein S0-A, putative ; K02998
small subunit ribosomal protein SAe
Length=287
Score = 368 bits (945), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 184/269 (68%), Positives = 217/269 (80%), Gaps = 5/269 (1%)
Query 16 RLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVA 75
+LS ED+IAKMLICK HIGTKNVEHKMR Y++K T EG+HLINL KT+EK+ +AARV+
Sbjct 8 KLSLQEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVIV 67
Query 76 AVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATD 135
A+E+PADVLV+SARPYG+RA LKF+QY GAQA A RWTPGMLTNQIT KF EPRL++ TD
Sbjct 68 AIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFMEPRLLIVTD 127
Query 136 PRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLR 195
PRTDA+AV+ES+YANVPVIALCDTDSPL+ VD+ IPCNNKG ESIALMYWLLAREVL LR
Sbjct 128 PRTDAQAVRESAYANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLR 187
Query 196 GEL-SRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQ-ESNNWA-TAAAADWGSK 252
GEL SRS PWDVMVD+FLWRDPEE +++++LED E PH Q ++ W AAAADW
Sbjct 188 GELPSRSVPWDVMVDMFLWRDPEEFERKERLEDEEAAPHTAQADATQWGADAAAADWKQA 247
Query 253 ANEWT-GPGTAAAAEWNDAA-AAPADWGA 279
+WT A EW+ +A AA +WG
Sbjct 248 GADWTGPAAGGAGGEWDQSAVAAEGEWGG 276
> pfa:PF10_0264 40S ribosomal protein S2B, putative; K02998 small
subunit ribosomal protein SAe
Length=263
Score = 347 bits (890), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 203/266 (76%), Gaps = 13/266 (4%)
Query 18 SAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAV 77
S E++IAKMLICKVHIGTKN+E+KM+ Y+Y ++GVH+INL KTYEKLQLAAR++ A+
Sbjct 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
Query 78 EHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPR 137
+PADV+VVSARP+G+RA LKFAQYTGAQA A RWTPGMLTNQI KF EPRL++ TDPR
Sbjct 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
Query 138 TDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGE 197
TDA++VKES+YAN+PVIALCD+DSPL+ VD+AIPCNNKG ESIALMYWLLA+EVL L+G
Sbjct 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
Query 198 LSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADWGSKANEWT 257
+ RS+PW+VMVD+FLWRDPE+ + ++ + P H N +A A D EWT
Sbjct 188 IPRSEPWNVMVDMFLWRDPEQFELKNLANEENTPTAPHLIENQYAAEAPYD------EWT 241
Query 258 GPGTAAAAEWNDAAAAPADWGAPAAA 283
EWND DW P AA
Sbjct 242 -----KKEEWNDNTN--EDWKNPIAA 260
> bbo:BBOV_III008460 17.m07741; 40S ribosomal protein S2; K02998
small subunit ribosomal protein SAe
Length=273
Score = 310 bits (793), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 194/272 (71%), Gaps = 20/272 (7%)
Query 13 AKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAAR 72
A+ L+ ED+I ML CKVHIGTKNVE+KM++Y++ T+EGVHLI+L T +K++LAAR
Sbjct 6 AQTELTPDEDSIRMMLTCKVHIGTKNVENKMKNYVFTRTQEGVHLIDLSWTLKKIKLAAR 65
Query 73 VVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIV 132
+ AV +PA+V+VVSARPYG+RA LKF+ Y G+Q A W PG LTNQIT KF EPRL++
Sbjct 66 AIVAVTNPAEVVVVSARPYGSRAILKFSHYVGSQPIAGSWVPGTLTNQITQKFIEPRLMI 125
Query 133 ATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVL 192
ATDPRTDA+A+KESSY NVPVIALCDTDSPL FVD+AIPCNNKG +SIALMYWLLAREVL
Sbjct 126 ATDPRTDAQALKESSYVNVPVIALCDTDSPLQFVDIAIPCNNKGKKSIALMYWLLAREVL 185
Query 193 CLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQ------PPHAHQESNNWATAAA 246
LR ++ R PW++MVD F WRD E+++ + + + RE+ PP A
Sbjct 186 YLRNQIQRHLPWEIMVDTFFWRDAEQMELKAEEQKREEAMSSLRPPM--------PPAVE 237
Query 247 ADWGSKANEWTGPGTAAAAEWNDAAAAPADWG 278
DW N+ T G A A+W A +WG
Sbjct 238 GDW----NQMT--GARANADWKVMAGGNDEWG 263
> tpv:TP04_0748 40S ribosomal protein SA; K02998 small subunit
ribosomal protein SAe
Length=274
Score = 305 bits (782), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 188/274 (68%), Gaps = 25/274 (9%)
Query 16 RLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVA 75
+L+ ED+I ML KVHIGTKNVE+KMR Y+Y T+EGVHLINL T EKL++AAR +
Sbjct 7 KLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIV 66
Query 76 AVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATD 135
V +P +V+VVSARPYG+RA LKF+ Y G+ A RW PG LTNQIT KF EPRL+VATD
Sbjct 67 TVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATD 126
Query 136 PRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLR 195
PRTDA++++ESSY ++PVIALCDTDSPL++VD+AIPCNNKG ESIALMYWLLAREVL LR
Sbjct 127 PRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLR 186
Query 196 GELSRSQPWDVMVDLFLWRDPEELDKR----------DKLEDREQPPHAHQESNNWATAA 245
+L R PWDV+VD F WRDPE+ +++ D L R P
Sbjct 187 DQLKRWMPWDVLVDTFFWRDPEQFEQKPEETVNTHDDDLLTSRPTVP----------LHP 236
Query 246 AADWGSKANEWTGPGTAAAAEWNDAAAAPADWGA 279
DW + P A +++W AA +WG+
Sbjct 237 LPDWST-----VDPAHANSSDWKVMAAGHEEWGS 265
> cpv:cgd3_2090 40S ribosomal protein SAe ; K02998 small subunit
ribosomal protein SAe
Length=260
Score = 301 bits (772), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 186/252 (73%), Gaps = 9/252 (3%)
Query 22 DTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHPA 81
D IAKM++CK HIGTKNVE KM SY+YK T EG+ LINL KT+EK+Q+AAR++A +++ A
Sbjct 14 DDIAKMIVCKTHIGTKNVEDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIATIDNLA 73
Query 82 DVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPRTDAR 141
DV+VVS RPYG+R +LKFAQ+TGA A R+TPG LTNQIT KF EPRL++ TDPR D++
Sbjct 74 DVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFMEPRLLIVTDPRVDSQ 133
Query 142 AVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGELSRS 201
AV ESSYAN+PVIALCDTDSPL +VDVAIPCNNKG ESIALMY+LLAREV LRG ++
Sbjct 134 AVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREVNFLRG---KT 190
Query 202 QPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAA---DWGSKANEWTG 258
WDVMVD+F WRDPEE + D E + A +AA +WG + W
Sbjct 191 DKWDVMVDVFFWRDPEEYENSAIGADMELNDGMGVDIEGAAVDSAAAANEWGGVSGNW-- 248
Query 259 PGTAAAAEWNDA 270
G +AA EW +A
Sbjct 249 -GGSAADEWRNA 259
> ath:AT3G04770 RPSAb; RPSAb (40S ribosomal protein SA B); structural
constituent of ribosome
Length=280
Score = 266 bits (681), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 169/268 (63%), Gaps = 6/268 (2%)
Query 16 RLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVA 75
++S E I ML VH+GTKN ++M Y++K +G+++INL KT++KLQ+AARV+
Sbjct 12 QVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV 71
Query 76 AVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATD 135
A+E+P D++V SARPYG RA LKFAQYTG A A R TPG TNQ+ F EPRL++ TD
Sbjct 72 AIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTD 131
Query 136 PRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLR 195
PRTD + +KE + N+P IA CDTDSP+ FVD+ IP NNKG SI ++WLLAR VL +R
Sbjct 132 PRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 191
Query 196 GELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAAD--WGSKA 253
G + +Q WDVMVDLF +R+PEE + E Q + + W TA +D W +
Sbjct 192 GTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGMVGGDQWTTAQISDAAWSGEV 251
Query 254 NEWTGP----GTAAAAEWNDAAAAPADW 277
+ G AA W A+ A W
Sbjct 252 EQPISAAPAVGVTVAAGWEAASVPAAGW 279
> mmu:636901 40S ribosomal protein SA-like
Length=295
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 180/292 (61%), Gaps = 19/292 (6%)
Query 10 MTEAKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQL 69
M+ A L E+ + K L H+G N+E +M YIYK +G+++INL++T+EKL L
Sbjct 1 MSRALNVLQMKEEDVFKFLAAGTHLGGTNLEFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query 70 AARVVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPR 129
AAR V A+E+P DV V+S+R G RA LKFA TGA A R+TPG TNQI A FREPR
Sbjct 61 AARAVVAIENPPDVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query 130 LIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAR 189
L+V TDPR D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM W+LAR
Sbjct 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDMAIPCNNKGAHSVGLMKWMLAR 180
Query 190 EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADW 249
EVLC+RG +SR PW+VM DL+ +RDPEE++K ++ A E +W
Sbjct 181 EVLCMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ---------AAAEKAVTKEEFQGEW 231
Query 250 GSKANEWTGPGTAAAAEWNDAAAAPA---------DWGAPAAAAAASAAAAA 292
+ A E+T A W++ AP+ DW A A SAA A
Sbjct 232 TTPAPEFTA-AQPEVAHWSEGVQAPSVPIQQFPMEDWSAQPATEDWSAAPTA 282
> ath:AT1G72370 P40; P40; structural constituent of ribosome
Length=294
Score = 263 bits (672), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 160/241 (66%), Gaps = 8/241 (3%)
Query 16 RLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVA 75
+LS E + M +VH+GTKN ++M Y++K +G+++ NL KT+EKLQ+AARV+
Sbjct 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query 76 AVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATD 135
A+E+P D++V SARPYG RA LKFAQYTGA A A R TPG TNQ+ F EPRL++ TD
Sbjct 71 AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130
Query 136 PRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLR 195
PRTD + +KE + N+P+IA CDTDSP+ FVD+ IP NNKG SI ++WLLAR VL +R
Sbjct 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190
Query 196 GELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQ--------PPHAHQESNNWATAAAA 247
G ++ Q WDVMVDLF +R+PEE D+ E Q P + + W TA
Sbjct 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIP 250
Query 248 D 248
D
Sbjct 251 D 251
> xla:100037080 hypothetical protein LOC100037080; K02998 small
subunit ribosomal protein SAe
Length=295
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 20/268 (7%)
Query 10 MTEAKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQL 69
M+ A L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL L
Sbjct 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query 70 AARVVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPR 129
AAR + A+E+PADV V+S+R G RA LKFA TGA A R+TPG TNQI A FREPR
Sbjct 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query 130 LIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAR 189
L+V TDPR D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAR
Sbjct 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query 190 EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADW 249
EVL +RG +SR PW+VM DL+ +RDPEE++K ++ AAA+
Sbjct 181 EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ--------------------AAAEK 220
Query 250 GSKANEWTGPGTAAAAEWNDAAAAPADW 277
E+ G TA A E+ A ADW
Sbjct 221 AVTKEEFQGEWTAPAPEFTAAQPEVADW 248
> mmu:16785 Rpsa, 67kDa, 67lr, AL022858, Lamr, Lamr1, Lamrl1,
MGC117921, MGC118614, MLR, P40, P40-3, P40-8; ribosomal protein
SA; K02998 small subunit ribosomal protein SAe
Length=295
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 20/268 (7%)
Query 10 MTEAKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQL 69
M+ A L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL L
Sbjct 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query 70 AARVVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPR 129
AAR + A+E+PADV V+S+R G RA LKFA TGA A R+TPG TNQI A FREPR
Sbjct 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query 130 LIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAR 189
L+V TDPR D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAR
Sbjct 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query 190 EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADW 249
EVL +RG +SR PW+VM DL+ +RDPEE++K ++ AAA+
Sbjct 181 EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ--------------------AAAEK 220
Query 250 GSKANEWTGPGTAAAAEWNDAAAAPADW 277
E+ G TA A E+ A ADW
Sbjct 221 AVTKEEFQGEWTAPAPEFTAAQPEVADW 248
> mmu:100505031 40S ribosomal protein SA-like; K02998 small subunit
ribosomal protein SAe
Length=295
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 20/268 (7%)
Query 10 MTEAKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQL 69
M+ A L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL L
Sbjct 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query 70 AARVVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPR 129
AAR + A+E+PADV V+S+R G RA LKFA TGA A R+TPG TNQI A FREPR
Sbjct 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query 130 LIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAR 189
L+V TDPR D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAR
Sbjct 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query 190 EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADW 249
EVL +RG +SR PW+VM DL+ +RDPEE++K ++ AAA+
Sbjct 181 EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ--------------------AAAEK 220
Query 250 GSKANEWTGPGTAAAAEWNDAAAAPADW 277
E+ G TA A E+ A ADW
Sbjct 221 AVTKEEFQGEWTAPAPEFTAAQPEVADW 248
> xla:380422 rpsa, 37lrp, MGC53465, lambr, lamr1, lrp, p40; ribosomal
protein SA; K02998 small subunit ribosomal protein SAe
Length=306
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/287 (47%), Positives = 180/287 (62%), Gaps = 12/287 (4%)
Query 17 LSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAA 76
L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL LAAR + A
Sbjct 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query 77 VEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDP 136
+E+PADV V+S+R G RA LKFA +GA A R+TPG TNQI A FREPRL+V TDP
Sbjct 68 IENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query 137 RTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRG 196
R D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAREVL +RG
Sbjct 128 RADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query 197 ELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWA-------TAAAADW 249
+SR PW+VM DL+ +RDPEE++K ++ E+ + W A ADW
Sbjct 188 TISREHPWEVMPDLYFYRDPEEIEKEEQAA-AEKATTKEEFQGEWTAPVAEFPQAEVADW 246
Query 250 GSKANEWTGPGTAAAAEWNDAAAAP---ADWGA-PAAAAAASAAAAA 292
+ P AE D AAP DW A PA+ SAA A
Sbjct 247 SEGVQVPSVPIQQFPAERPDVQAAPKPAEDWSAQPASTDDWSAAPTA 293
> xla:733335 rpsa, 37LRP, 67LR, LBP/p40, LRP/LR, LamR; 67kD laminin
receptor
Length=306
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 171/261 (65%), Gaps = 22/261 (8%)
Query 17 LSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAA 76
L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL LAAR + A
Sbjct 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query 77 VEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDP 136
+E+PADV V+S+R G RA LKFA +GA A R+TPG TNQI A FREPRL+V TDP
Sbjct 68 IENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query 137 RTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRG 196
R D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAREVL +RG
Sbjct 128 RADHQPITEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query 197 ELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADWGSKANEW 256
+SR PW+VM DL+ +RDPEE++K ++ AAA+ + E+
Sbjct 188 TISREHPWEVMPDLYFYRDPEEIEKEEQ--------------------AAAEKATTKEEF 227
Query 257 TGPGTAAAAEWNDAAAAPADW 277
G TA AE+ A ADW
Sbjct 228 QGEWTAPVAEFPQAEV--ADW 246
> hsa:3921 RPSA, 37LRP, 67LR, LAMBR, LAMR1, LBP, LRP, p40; ribosomal
protein SA; K02998 small subunit ribosomal protein SAe
Length=295
Score = 260 bits (664), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 172/268 (64%), Gaps = 20/268 (7%)
Query 10 MTEAKPRLSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQL 69
M+ A L E+ + K L H+G N++ +M YIYK +G+++INL++T+EKL L
Sbjct 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query 70 AARVVAAVEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPR 129
AAR + A+E+PADV V+S+R G RA LKFA TGA A R+TPG TNQI A FREPR
Sbjct 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query 130 LIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAR 189
L+V TDPR D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAR
Sbjct 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query 190 EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADW 249
EVL +RG +SR PW+VM DL+ +RDPEE++K ++ AAA+
Sbjct 181 EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ--------------------AAAEK 220
Query 250 GSKANEWTGPGTAAAAEWNDAAAAPADW 277
E+ G TA A E+ ADW
Sbjct 221 AVTKEEFQGEWTAPAPEFTATQPEVADW 248
> dre:394027 rpsa, MGC55831, lamr1, zgc:55831, zgc:77824; ribosomal
protein SA; K02998 small subunit ribosomal protein SAe
Length=308
Score = 259 bits (662), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 154/208 (74%), Gaps = 0/208 (0%)
Query 17 LSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAA 76
L E+ + K L H+G N++ +M Y+YK +GV++INL+KT+EKL LAAR + A
Sbjct 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAIVA 67
Query 77 VEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDP 136
+E+PADV V+S+R G RA LKFA TG+ A R+TPG TNQI A FREPRL++ TDP
Sbjct 68 IENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQIQAAFREPRLLIVTDP 127
Query 137 RTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRG 196
R D + + E+SY N+P IALC+TDSPL +VD+AIPCNNKG S+ LM+W+LAREVL +RG
Sbjct 128 RADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRG 187
Query 197 ELSRSQPWDVMVDLFLWRDPEELDKRDK 224
+SR PW+VM DL+ +RDPEE++K ++
Sbjct 188 TISREHPWEVMPDLYFYRDPEEIEKEEQ 215
> dre:550536 zgc:110181
Length=295
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 174/277 (62%), Gaps = 12/277 (4%)
Query 17 LSAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAA 76
L+ E I KML K HIG++N + +M Y+YK +GVH+INL+KT+EKL LAAR + A
Sbjct 5 LALTEPDILKMLAAKTHIGSENSDFQMLQYVYKRCIDGVHIINLKKTWEKLVLAARAIVA 64
Query 77 VEHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDP 136
+E+P++V +S R G RA LK+++YTGA A R+TPG TNQI A FREPRL+V DP
Sbjct 65 IENPSEVFAISTRQQGQRAVLKYSKYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVADP 124
Query 137 RTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRG 196
D +++ E+SY N+PVIA CD DSPL +VD+AIPCN K S+ LM+W L REVL LR
Sbjct 125 LADHQSIVEASYVNIPVIAFCDVDSPLRYVDIAIPCNTKAPHSLGLMFWFLTREVLRLRA 184
Query 197 ELSRSQPWDVMVDLFLWRDPEELDKRDKLEDRE------QPPHAHQE---SNNWAT-AAA 246
+SR PW++M D+F +R PE++DK ++ + +P A + +W+T A
Sbjct 185 MISRDTPWEIMPDMFFYRAPEDVDKEEQAKQEALAAMPVRPIEADYSAPIAEDWSTEVAP 244
Query 247 ADWGSKANEWTGPGTAAAAEWNDAAAAPA--DWGAPA 281
W +A ++ A A +A P DW APA
Sbjct 245 TSWADEATDFAQAAPVAPAAPEQWSAEPVTDDWTAPA 281
> sce:YGR214W RPS0A, NAB1, NAB1A, YST1; Rps0ap; K02998 small subunit
ribosomal protein SAe
Length=252
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
Query 27 MLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHPADVLVV 86
+L H+G +NV+ Y++ +GVH+IN+ KT+EKL LAAR++AA+ +P DV+ +
Sbjct 17 LLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAI 76
Query 87 SARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPRTDARAVKES 146
S+R +G RA LKFA +TGA A R+TPG TN IT F+EPRL++ TDPR+DA+A+KE+
Sbjct 77 SSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEA 136
Query 147 SYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGEL-SRSQPWD 205
SY N+PVIAL D DSP +FVDVAIPCNN+G SI L+++LLAREVL LRG L R+QPW
Sbjct 137 SYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWS 196
Query 206 VMVDLFLWRDP 216
+M DL+ +RDP
Sbjct 197 IMPDLYFYRDP 207
> sce:YLR048W RPS0B, NAB1B, YST2; Rps0bp; K02998 small subunit
ribosomal protein SAe
Length=252
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 143/191 (74%), Gaps = 1/191 (0%)
Query 27 MLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHPADVLVV 86
+L H+G +NV+ Y++ +GVH+IN+ KT+EKL LAAR++AA+ +P DV+ +
Sbjct 17 LLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAI 76
Query 87 SARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPRTDARAVKES 146
S+R YG RA LKFA +TGA A R+TPG TN IT F+EPRL++ TDPR DA+A+KE+
Sbjct 77 SSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEA 136
Query 147 SYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGEL-SRSQPWD 205
SY N+PVIAL D DSP +FVDVAIPCNN+G SI L+++LLAREVL LRG L R+QPW
Sbjct 137 SYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWS 196
Query 206 VMVDLFLWRDP 216
+M DL+ +R+P
Sbjct 197 IMPDLYFYRNP 207
> cel:B0393.1 rps-0; Ribosomal Protein, Small subunit family member
(rps-0); K02998 small subunit ribosomal protein SAe
Length=276
Score = 227 bits (578), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 171/263 (65%), Gaps = 17/263 (6%)
Query 21 EDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP 80
E+ + K+L + H+G+ N+ +M+ Y+YK +G ++IN++KT+EKL LAAR +AAVE+P
Sbjct 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENP 71
Query 81 ADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPRTDA 140
ADV+VVSARPY RA LKFA +TGA A R++PG LTNQI F+EPRL+V +DPR D
Sbjct 72 ADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDH 131
Query 141 RAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGELSR 200
+AV E+SY VPVI+ +T+SPL +D+ +PCNNKG SI LM+W+LARE+L LRG++SR
Sbjct 132 QAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISR 191
Query 201 SQPW-----DVMVDLFLWRDPEELDKRD--------KLEDREQPPHAHQESNNWATAAAA 247
+ ++M DL+ +RDP E +K + + ++ +QP +
Sbjct 192 QTGFVLEGKEIMPDLYFYRDPTETEKEETGAHADVAEAQEYQQPTDIDFTTQG---GKVD 248
Query 248 DWGSKANEWTGPGTAAAAEWNDA 270
DW ++ WT T EW +A
Sbjct 249 DWAAETATWTAE-TKTTEEWANA 270
> sce:YHL004W MRP4; Mitochondrial ribosomal protein of the small
subunit; K02967 small subunit ribosomal protein S2
Length=394
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query 23 TIAKMLICKVHIGTKNV--EHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAV-EH 79
T+ ++ VH+G +SYIY + G+H+I+L +T L+ AA+VV V E
Sbjct 184 TVESLMSAGVHLGQSTSLWRSSTQSYIYGEYK-GIHIIDLNQTLSYLKRAAKVVEGVSES 242
Query 80 PADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQI------------------ 121
+L + R R + A+ T + RW PG LTN
Sbjct 243 GGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEKQEIDSNDNPT 302
Query 122 --------TAKFREPRLIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCN 173
T+K +P L+V +P + A+ E+ + VP IA+ DTDS V IP N
Sbjct 303 ERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGN 362
Query 174 NKGLESIALMYWLLAR 189
+ L S+ + +LAR
Sbjct 363 DDSLRSVNFLLGVLAR 378
> ath:AT3G03600 RPS2; RPS2 (RIBOSOMAL PROTEIN S2); structural
constituent of ribosome
Length=219
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query 23 TIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP-A 81
I K+L H+G + EH + Y Y TR G+ +I+ KT L+ AA VA + H
Sbjct 7 VIQKLLNTGAHLGRRAAEHHFKQYAYG-TRNGMTIIDSDKTLICLRSAAHFVANLAHMRG 65
Query 82 DVLVVSARPYG------ARASLKFAQYTGAQAAAARWTPGMLTNQIT-AKFRE------- 127
++ V+ P ++ Y +A G LTN + KFR
Sbjct 66 NIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRHKKLCF 125
Query 128 -----PRLIVATDPRTDARAVKESSYANVPVIALCDTDSPLDFVD-VAIPCNNKGLESIA 181
P +V D + + E+S +PV+A+ D + PL+F + + P + +S+
Sbjct 126 GPTTMPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPAR--DSVK 183
Query 182 LMYWLLAREVLCLRGE-----LSRSQPWDVMVDL 210
+Y C E + D+M DL
Sbjct 184 FVYLFCNVITKCFVAEQMKLGIKEGSNEDLMKDL 217
> xla:443704 mrps2; mitochondrial ribosomal protein S2
Length=280
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query 23 TIAKMLICKVHIG-TKNVEHK-MRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP 80
++ ++ +VH+G K H+ M SY++ E +I+L +T LQLA + A + +
Sbjct 80 SLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQ-DIIDLDQTMSHLQLALNITAHIAYR 138
Query 81 ADVLVVSARPYGARASLK-FAQYTGAQAAAARWTPGMLTN---QITAKFREPRLIVATDP 136
V++ +R ++ A+ G A W G+LTN Q R P LI+
Sbjct 139 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSS 198
Query 137 RTDA----RAVKESSYANVPVIALCDTDSPLDFVDVAIPCNN 174
+ A+++++ N+P + + DT+ + IP N+
Sbjct 199 LNNVFEQHLAIRDAAKMNIPTMGIVDTNCNPSLITYPIPGND 240
> ath:ArthCp011 rps2; 30S ribosomal protein S2; K02967 small subunit
ribosomal protein S2
Length=236
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 79/209 (37%), Gaps = 50/209 (23%)
Query 24 IAKMLICKVHIG--TKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVA-AVEHP 80
+ +M+ VH G T+ +M YI R+G+H+INL +T L A +V A
Sbjct 10 LEEMMRAGVHFGHGTRKWNPRMAPYI-SAKRKGIHIINLTRTARFLSEACDLVFDAASRG 68
Query 81 ADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITA-----KFRE-------- 127
L+V + A + A +W GMLTN T KFR+
Sbjct 69 KQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKTE 128
Query 128 ---------------------------------PRLIVATDPRTDARAVKESSYANVPVI 154
P +++ D + + A++E +P I
Sbjct 129 GFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPTI 188
Query 155 ALCDTDSPLDFVDVAIPCNNKGLESIALM 183
+L DT+ D D++IP N+ + SI +
Sbjct 189 SLIDTNCNPDLADISIPANDDAIASIRFI 217
> xla:733351 hypothetical protein LOC733351
Length=282
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query 23 TIAKMLICKVHIG-TKNVEHK-MRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP 80
++ ++ +VH+G K H+ M SY++ E +I+L +T LQLA + A + +
Sbjct 82 SLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQ-DIIDLDQTMSHLQLALNITAHIAYR 140
Query 81 ADVLVVSARPYGARASLK-FAQYTGAQAAAARWTPGMLTN---QITAKFREPRLIVATDP 136
+++ +R ++ A+ G A W G+LTN Q R P LI+
Sbjct 141 KGIILFVSRNRQFTYLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLST 200
Query 137 RTDA----RAVKESSYANVPVIALCDTDSPLDFVDVAIPCNN 174
+ A+++++ N+P + + DT+ + IP N+
Sbjct 201 LNNVFEQHMAIRDAAKMNIPTMGIVDTNCNPSLITYPIPGND 242
> mmu:118451 Mrps2, 1500019M10Rik; mitochondrial ribosomal protein
S2
Length=272
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query 23 TIAKMLICKVHIGTK-NVEHK-MRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP 80
++ + +VH+G K H+ M YI+ R G +I+L +T LQLA A V +
Sbjct 58 SVKSLFEARVHLGHKAGCRHRFMEPYIFG-NRLGQDIIDLDQTALNLQLALNFTAHVAYR 116
Query 81 ADVLVVSARPYGARASLKF-AQYTGAQAAAARWTPGMLTNQ---ITAKFREPRLIVATDP 136
+++ +R ++ AQ G A + G+LTN R P LI+
Sbjct 117 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 176
Query 137 RTDAR----AVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLL 187
+ AV++++ N+P + + DT+ + IP N+ ++I L L
Sbjct 177 LNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLF 231
> eco:b0169 rpsB, ECK0168, JW0164; 30S ribosomal subunit protein
S2; K02967 small subunit ribosomal protein S2
Length=241
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 85/232 (36%), Gaps = 50/232 (21%)
Query 27 MLICKVHIG--TKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLA-ARVVAAVEHPADV 83
ML VH G T+ KM+ +I+ R VH+INL KT A A + +
Sbjct 9 MLKAGVHFGHQTRYWNPKMKPFIFG-ARNKVHIINLEKTVPMFNEALAELNKIASRKGKI 67
Query 84 LVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTN------------------------ 119
L V + + A A RW GMLTN
Sbjct 68 LFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFD 127
Query 120 QITAK-----FRE-----------------PRLIVATDPRTDARAVKESSYANVPVIALC 157
++T K RE P + D + A+KE++ +PV A+
Sbjct 128 KLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIV 187
Query 158 DTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGELSRSQPWDVMVD 209
DT+S D VD IP N+ + ++ L +A V R + SQ + V+
Sbjct 188 DTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVE 239
> hsa:51116 MRPS2, MRP-S2, S2mt; mitochondrial ribosomal protein
S2
Length=296
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query 23 TIAKMLICKVHIGTK-NVEHK-MRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVEHP 80
++ + +VH+G K H+ M YI+ +R +I+L +T LQLA A + +
Sbjct 80 SVRSLFDARVHLGHKAGCRHRFMEPYIFG-SRLDHDIIDLEQTATHLQLALNFTAHMAYR 138
Query 81 ADVLVVSARPYGARASLK-FAQYTGAQAAAARWTPGMLTNQ---ITAKFREPRLIVATDP 136
+++ +R ++ A+ G A + GMLTN R P LI+
Sbjct 139 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 198
Query 137 RTDAR----AVKESSYANVPVIALCDTDSPLDFVDVAIPCNN 174
+ AV++++ N+P + + DT+ + +P N+
Sbjct 199 LNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGND 240
> tgo:TGME49_007750 hypothetical protein
Length=761
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query 119 NQITAKFREPRLIVATDPRTDARAVKESSYANVPV---IALCDTDSPLDFVDVAIPCNNK 175
+ T F +P L R AR + + Y +PV + L SP F++ C N
Sbjct 421 HHTTGLFEKPLLFQQNRHRF-ARFLHKIIYFEIPVDLSLHLAQRCSP-RFLNDFDNCWNF 478
Query 176 GLESIALMYWLLAR--EVLCLRGELSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPH 233
S ++++W+LAR E + G S P DL + DP+E+ + D+L +
Sbjct 479 EFTSRSILFWMLARFNEAVDAAGNTHLSAPIIGDDDLIMTGDPDEIVRGDRLRHLKMCEP 538
Query 234 AHQESNNWATA---------AAADWGSKAN 254
Q + WA A D+G++A
Sbjct 539 VEQPTLGWAMVHYPGHLGGMARKDFGAQAG 568
> cel:T23B12.3 hypothetical protein
Length=264
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query 24 IAKMLICKVHIGTK--NVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAVE-HP 80
I +M ++H G K V + M+ +Y R GV L +L T + L A VA V
Sbjct 74 IDEMFKARLHYGHKVGTVNNNMKWALYG-ERLGVCLFDLDITKKYLVRALNFVAHVSLRG 132
Query 81 ADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQ---ITAKFREPR----LIVA 133
+L V++ K A G + +W G LTN + A R P L
Sbjct 133 GMILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLSTL 192
Query 134 TDPRTDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLC 193
T + A+ E++ +P I + D++S ++ +P N+ +S + + V
Sbjct 193 TSLGENHPAIVEAAKMAIPTIGVVDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRK 252
Query 194 LRGELSRSQ 202
+ E R Q
Sbjct 253 GQEERKRQQ 261
> pfa:PFD0775c RNA binding protein, putative
Length=579
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 0/47 (0%)
Query 81 ADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFRE 127
AD+++ S + RA + F + A AA+++ G L NQ F E
Sbjct 533 ADIMLTSKGTHSGRACITFPDFESASLAASQYDGGTLNNQKIKVFVE 579
> mmu:80280 Cdk5rap3, 1810007E24Rik, BC002318, C53, C81486, HSF-27,
IC53, MGC8303, MST016; CDK5 regulatory subunit associated
protein 3
Length=503
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query 229 EQPPHAHQES----NNWATAAAADWGSKAN----EWTGPGTAAAAEWNDAAAAPADWGAP 280
E+PP QE ++ A +D G A +W G + +E DA A DWG
Sbjct 255 EEPPEQVQEDEIDWGDFGVEAVSDSGIVAETPGIDW---GISLESEAKDAGADKIDWGDD 311
Query 281 AAAAA 285
AAAA+
Sbjct 312 AAAAS 316
> ath:AT2G40030 NRPD1B; NRPD1B; DNA binding / DNA-directed RNA
polymerase
Length=1976
Score = 30.4 bits (67), Expect = 8.0, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query 247 ADWG--SKANEWTGPGTAAAAEWN----DAAAAPADWGAPAAAAAASA 288
A WG K N T G AA W+ D + PA WG+ AAA S+
Sbjct 1560 AGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWGSTDAAAWGSS 1607
Lambda K H
0.317 0.127 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 11902145332
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40