bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0478_orf3 Length=118 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_061210 26S proteasome non-ATPase regulatory subunit... 144 7e-35 sce:YDL147W RPN5, NAS5; Essential, non-ATPase regulatory subun... 94.4 8e-20 ath:AT5G64760 RPN5B; RPN5B (REGULATORY PARTICLE NON-ATPASE SUB... 87.4 1e-17 bbo:BBOV_III011560 17.m07987; PCI domain containing protein; K... 84.3 8e-17 dre:321898 psmd12, wu:fb38a06, wu:fc34f08, wu:fc49f02; proteas... 84.3 9e-17 xla:399245 psmd12, MGC80339; proteasome (prosome, macropain) 2... 84.0 1e-16 pfa:PF10_0174 26S proteasome subunit p55, putative; K03035 26S... 83.6 1e-16 hsa:5718 PSMD12, MGC75406, Rpn5, p55; proteasome (prosome, mac... 83.6 1e-16 mmu:66997 Psmd12, 1500002F15Rik, AI480719, P55; proteasome (pr... 83.6 2e-16 xla:431923 hypothetical protein MGC81129; K03035 26S proteasom... 82.4 3e-16 tpv:TP02_0768 26S proteasome subunit p55; K03035 26S proteasom... 79.3 3e-15 cel:F10G7.8 rpn-5; proteasome Regulatory Particle, Non-ATPase-... 72.8 3e-13 cpv:cgd1_1530 Rpn5 like 26S proteasomal regulatory subunit 12,... 45.1 6e-05 cel:Y55F3AM.15 csn-4; COP-9 SigNalosome subunit family member ... 37.0 0.014 bbo:BBOV_III008580 17.m07750; PCI domain containing protein; K... 34.7 0.067 tpv:TP04_0396 hypothetical protein; K15030 translation initiat... 34.7 0.077 dre:393261 psmd6, MGC56471, zgc:56471; proteasome (prosome, ma... 33.9 0.14 tgo:TGME49_038180 26S proteasome non-ATPase regulatory subunit... 33.5 0.17 xla:734947 hypothetical protein MGC131117; K03037 26S proteaso... 33.5 0.18 hsa:9861 PSMD6, KIAA0107, Rpn7, S10, SGA-113M, p44S10; proteas... 33.1 0.21 mmu:66413 Psmd6, 2400006A19Rik; proteasome (prosome, macropain... 32.0 0.51 xla:495148 psmd6, p44s10, rpn7, s10; proteasome (prosome, macr... 31.6 0.58 cpv:cgd7_2140 flap endonuclease 1 ; K04799 flap endonuclease-1... 30.8 1.1 tpv:TP04_0762 proteosome subunit; K03036 26S proteasome regula... 30.4 1.4 pfa:PF11_0303 26S proteasome regulatory complex subunit, putat... 30.0 1.7 xla:380154 p44s10; hypothetical protein MGC53209; K03037 26S p... 30.0 1.8 cpv:cgd8_1020 hypothetical protein 30.0 1.8 ath:AT4G24820 26S proteasome regulatory subunit, putative (RPN... 30.0 2.0 cel:T06E6.13 fbxa-104; F-box A protein family member (fbxa-104) 29.6 2.1 dre:100331661 keratin 7-like 29.6 2.4 ath:AT2G24490 RPA2; RPA2 (REPLICON PROTEIN A2); protein bindin... 29.6 2.4 sce:YKL113C RAD27, ERC11, FEN1, RTH1; 5' to 3' exonuclease, 5'... 29.3 2.9 xla:394311 fen1-b, fen-1, mf1, rad2; flap structure-specific e... 29.3 3.4 ath:AT5G26680 endonuclease, putative; K04799 flap endonuclease... 28.9 4.5 xla:394303 fen1-a, MGC196488, MGC196492, fen-1, fen1, mf1, rad... 28.1 6.2 cel:Y39A1A.1 hypothetical protein 28.1 7.6 bbo:BBOV_IV009620 23.m05751; hypothetical protein 27.7 8.1 tgo:TGME49_030830 dynein heavy chain, putative (EC:3.1.3.48) 27.7 8.8 hsa:10349 ABCA10, EST698739; ATP-binding cassette, sub-family ... 27.7 8.9 tgo:TGME49_092220 26S proteasome non-ATPase regulatory subunit... 27.7 9.2 mmu:14156 Fen1, AW538437; flap structure specific endonuclease... 27.7 9.2 > tgo:TGME49_061210 26S proteasome non-ATPase regulatory subunit, putative ; K03035 26S proteasome regulatory subunit N5 Length=485 Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 0/118 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W LLR+RVIQHN+RV+ YS I + RVASLL I ++EAESE+SEL + + AKIDRPA Sbjct 368 WALLRRRVIQHNIRVIATYYSCIEMDRVASLLDITKDEAESEISELVCSNFIEAKIDRPA 427 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVHAARAKAAAANARMAS 118 TV FGK K L W++ ++ LLD+VDLC H+IQKERMVHAARAK AA AR AS Sbjct 428 GTVEFGKRKGTFDRLNSWAADVTSLLDRVDLCSHLIQKERMVHAARAKNAALLARNAS 485 > sce:YDL147W RPN5, NAS5; Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; K03035 26S proteasome regulatory subunit N5 Length=445 Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 73/108 (67%), Gaps = 0/108 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+KRVI+HNLRV+ YS I L R+ LL + E + E+ +S+L + G++YAK++RPA Sbjct 338 WEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGIIYAKVNRPA 397 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVHAARAK 108 + V F KPK +L EWS ++ +LL+ ++ H+I KE ++H +AK Sbjct 398 KIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEEIMHGLQAK 445 > ath:AT5G64760 RPN5B; RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B); K03035 26S proteasome regulatory subunit N5 Length=442 Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 0/106 (0%) Query 4 LRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTV 63 L+ R+I+HN+ V+ YS I +R+A LL + EEAE LSE+ + L AKIDRP+ + Sbjct 337 LKLRIIEHNILVVSKYYSRITFKRLAELLCLTTEEAEKHLSEMVVSKALIAKIDRPSGII 396 Query 64 AFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVHAARAKA 109 F K +L W+++L KLLD V+ CH I KE MVH +A Sbjct 397 CFQIVKDSNEILNSWATNLEKLLDLVEKSCHQIHKETMVHKVALRA 442 > bbo:BBOV_III011560 17.m07987; PCI domain containing protein; K03035 26S proteasome regulatory subunit N5 Length=474 Score = 84.3 bits (207), Expect = 8e-17, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 0/107 (0%) Query 2 TLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPAR 61 + L RVIQHN+ V Y+ + + R++ L ++ E E+S + A +YAKIDRPA Sbjct 357 STLADRVIQHNIMVASKFYTTLQVTRLSELTNTTCDKLEEEISAMVHAKTIYAKIDRPAG 416 Query 62 TVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVHAARAK 108 + FG+ K +L WS+ ++ L+ VD C ++QKE+M+H AR K Sbjct 417 LIRFGERKDSDTLLLSWSTDIANLMGLVDQCSRLVQKEKMIHEARLK 463 > dre:321898 psmd12, wu:fb38a06, wu:fc34f08, wu:fc49f02; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5 Length=456 Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 0/103 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+ RV++HN+R++ Y+ I + R+A+LL + +E+E LS L +YAK+DR A Sbjct 351 WKDLKNRVVEHNIRIMAKYYTSITMGRMAALLDLSVDESEEFLSNLVVNKTIYAKVDRLA 410 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 + F +PK +L +WS L+ L+ V+ H+I KE M+H Sbjct 411 GIINFQRPKDPNDLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453 > xla:399245 psmd12, MGC80339; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5 Length=441 Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 0/103 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+ RV++HN+R++ Y+ I ++R+A LL + +E+E LS L +YAK+DR A Sbjct 336 WKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSIDESEEFLSSLVVNKTIYAKVDRLA 395 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 + F +PK +L +WS L+ L+ V+ H+I KE M+H Sbjct 396 GIINFQRPKDPNDLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 438 > pfa:PF10_0174 26S proteasome subunit p55, putative; K03035 26S proteasome regulatory subunit N5 Length=467 Score = 83.6 bits (205), Expect = 1e-16, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 0/106 (0%) Query 3 LLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPART 62 L +K+V+ HN+ V+ Y I L R+A LL E++E+ LSEL SA + +KIDR Sbjct 351 LFKKKVMHHNIHVISNCYDQISLNRLAQLLNASIEDSENLLSELVSAKFINSKIDRLNGI 410 Query 63 VAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVHAARAK 108 + FG+ K +L WS ++ +LD ++ H+IQKERM+H A+ K Sbjct 411 IKFGQKKNPENLLNSWSLQINDILDLLEESSHLIQKERMLHEAKLK 456 > hsa:5718 PSMD12, MGC75406, Rpn5, p55; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5 Length=456 Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 0/103 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+ RV++HN+R++ Y+ I ++R+A LL + +E+E+ LS L ++AK+DR A Sbjct 351 WKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLA 410 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 + F +PK +L +WS L+ L+ V+ H+I KE M+H Sbjct 411 GIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453 > mmu:66997 Psmd12, 1500002F15Rik, AI480719, P55; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5 Length=456 Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 0/103 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+ RV++HN+R++ Y+ I ++R+A LL + +E+E+ LS L ++AK+DR A Sbjct 351 WKDLKSRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLA 410 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 + F +PK +L +WS L+ L+ V+ H+I KE M+H Sbjct 411 GVINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453 > xla:431923 hypothetical protein MGC81129; K03035 26S proteasome regulatory subunit N5 Length=441 Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 0/103 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L+ RV++HN+R++ Y+ I ++R+A LL + E+E LS L +YAK+DR A Sbjct 336 WKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVNESEEFLSSLVVNKTIYAKVDRLA 395 Query 61 RTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 + F +PK +L +WS L+ L+ V+ H+I KE M+H Sbjct 396 GIINFQRPKDPNDLLNDWSQKLNSLMALVNKTTHLIAKEEMIH 438 > tpv:TP02_0768 26S proteasome subunit p55; K03035 26S proteasome regulatory subunit N5 Length=500 Score = 79.3 bits (194), Expect = 3e-15, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 21/137 (15%) Query 3 LLRKRVIQHNLRVLCANYSVIHLQRVASLLGI---------------------PEEEAES 41 LL R+IQHN++++ Y+ I L+R+++LL I + + E+ Sbjct 364 LLYDRIIQHNVKIVSKYYNKITLERLSTLLNINSDVNPYYSITLVTHSIHLLPSKSKLEN 423 Query 42 ELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERM 101 E+S + G++ +KI+R V F K ++L W ++++KL++ VD C ++QKE+M Sbjct 424 EISNMVEMGIIDSKINRITGIVKFQKKLQTEIILNNWVNNITKLMELVDQCSRLVQKEKM 483 Query 102 VHAARAKAAAANARMAS 118 +H AR+K + + +S Sbjct 484 IHEARSKQIQLDTQFSS 500 > cel:F10G7.8 rpn-5; proteasome Regulatory Particle, Non-ATPase-like family member (rpn-5); K03035 26S proteasome regulatory subunit N5 Length=490 Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAG-VLYAKIDRP 59 W+ L RV +HN+R++ Y+ I +R+A LL P +E ES + L G + AK+ RP Sbjct 377 WSDLHLRVGEHNMRMIAKYYTQITFERLAELLDFPVDEMESFVCNLIVTGQITGAKLHRP 436 Query 60 ARTVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMIQKERMVH 103 +R V K ++ L+ W+S++ KL D ++ H+I KE+MVH Sbjct 437 SRIVNLRLKKANVEQLDVWASNVHKLTDTLNKVSHLILKEQMVH 480 > cpv:cgd1_1530 Rpn5 like 26S proteasomal regulatory subunit 12, PINT domain containing protein ; K03035 26S proteasome regulatory subunit N5 Length=559 Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 0/65 (0%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 +TL +R+ + N+ ++ Y I QRV LL + +E + ++ L G+ AKI++PA Sbjct 449 FTLFMQRIQERNISIISCYYKTISFQRVQDLLNLDGQELQLVVNHLVERGIFSAKINQPA 508 Query 61 RTVAF 65 + F Sbjct 509 GIITF 513 > cel:Y55F3AM.15 csn-4; COP-9 SigNalosome subunit family member (csn-4); K12178 COP9 signalosome complex subunit 4 Length=412 Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query 2 TLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPAR 61 ++L+ + +HN+ + Y I + + LLG+ E AES E+ S+ L+ ID+ Sbjct 310 SILKGVIQEHNITAISQLYINISFKTLGQLLGVDTEAAESMAGEMISSERLHGYIDQTNG 369 Query 62 TVAFGKPKTDLVVLEEWSSSLSKLLDKVDLCCHMI 96 + F D + W S + L++++ MI Sbjct 370 ILHF----EDSNPMRVWDSQILSTLEQINKVSDMI 400 > bbo:BBOV_III008580 17.m07750; PCI domain containing protein; K03036 26S proteasome regulatory subunit N6 Length=598 Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust. Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Query 4 LRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRP-ART 62 L +++ N+ + YS++ + ++ L +P+++ E +L+E+ G L ID+ A Sbjct 501 LYDALLERNITRILKPYSIVQISFLSHKLSLPQDKVEKKLAEMILDGKLRGTIDQGNANL 560 Query 63 VAFGKPKTDLVVLEEWSSSLSKLLDKVD 90 + F + E+ + ++SKL+ +D Sbjct 561 LLFDEETVRETFYEDVNHTISKLMSVID 588 > tpv:TP04_0396 hypothetical protein; K15030 translation initiation factor 3 subunit M Length=450 Score = 34.7 bits (78), Expect = 0.077, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 10/100 (10%) Query 1 WTLLRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPA 60 W L +++ + +C S I ++ + L +P EEAE + + GV+ A ID+ + Sbjct 344 WKPLVEKLTLLTISTMCQQQSEIPIEMIEKNLQLPPEEAEQMIVNAINKGVMEALIDQNS 403 Query 61 RTV--------AFGKPKTDLVV--LEEWSSSLSKLLDKVD 90 + V FG + + L++W + ++ L++ VD Sbjct 404 KKVIINHVVHREFGNEELKQLYNNLKQWRNCINTLINIVD 443 > dre:393261 psmd6, MGC56471, zgc:56471; proteasome (prosome, macropain) 26S subunit, non-ATPase, 6; K03037 26S proteasome regulatory subunit N7 Length=386 Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Query 16 LCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVL 75 L +Y + L +A G+ E + ELS +AG L+ KID+ V +P + Sbjct 304 LLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS----- 358 Query 76 EEWSSSLSKLLDKVDLCCHMIQK 98 + W + + K DL + +QK Sbjct 359 KNW--QYQETIKKGDLLLNRVQK 379 > tgo:TGME49_038180 26S proteasome non-ATPase regulatory subunit, putative ; K03037 26S proteasome regulatory subunit N7 Length=392 Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 7/79 (8%) Query 20 YSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWS 79 Y + ++ +A+ G+ E+E+S ++G L +IDR V +P +E S Sbjct 314 YKSVTIENMATAFGVSPSFIEAEVSGFIASGKLSCRIDRVNAVVESNRP-------DERS 366 Query 80 SSLSKLLDKVDLCCHMIQK 98 S ++L + DL + IQK Sbjct 367 RSYLRILKQGDLLLNRIQK 385 > xla:734947 hypothetical protein MGC131117; K03037 26S proteasome regulatory subunit N7 Length=389 Score = 33.5 bits (75), Expect = 0.18, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Query 16 LCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKP 68 L +Y + LQ +A G+ + + EL+ +AG L+AK+DR V +P Sbjct 307 LLESYRSLTLQYMAEAFGVTVDYIDQELARFIAAGRLHAKVDRVGGIVETNRP 359 > hsa:9861 PSMD6, KIAA0107, Rpn7, S10, SGA-113M, p44S10; proteasome (prosome, macropain) 26S subunit, non-ATPase, 6; K03037 26S proteasome regulatory subunit N7 Length=389 Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query 11 HNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKT 70 H L +Y + L +A G+ E + ELS +AG L+ KID+ V +P + Sbjct 302 HAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS 361 Query 71 DLVVLEEWSSSLSKLLDKVDLCCHMIQK 98 + W + + K DL + +QK Sbjct 362 -----KNW--QYQETIKKGDLLLNRVQK 382 > mmu:66413 Psmd6, 2400006A19Rik; proteasome (prosome, macropain) 26S subunit, non-ATPase, 6; K03037 26S proteasome regulatory subunit N7 Length=389 Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query 11 HNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKT 70 H L +Y + L +A G+ + + ELS +AG L+ KID+ V +P + Sbjct 302 HAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS 361 Query 71 DLVVLEEWSSSLSKLLDKVDLCCHMIQK 98 + W + + K DL + +QK Sbjct 362 -----KNW--QYQETIKKGDLLLNRVQK 382 > xla:495148 psmd6, p44s10, rpn7, s10; proteasome (prosome, macropain) 26S subunit, non-ATPase, 6; K03037 26S proteasome regulatory subunit N7 Length=389 Score = 31.6 bits (70), Expect = 0.58, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Query 16 LCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVL 75 L +Y + L +A G+ E + ELS +AG L+ KID+ V +P + Sbjct 307 LLESYRSLTLGHMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS----- 361 Query 76 EEWSSSLSKLLDKVDLCCHMIQK 98 + W + + K DL + +QK Sbjct 362 KNW--QYQETIKKGDLLLNRVQK 382 > cpv:cgd7_2140 flap endonuclease 1 ; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=490 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query 25 LQRVASLLGIP----EEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSS 80 ++++ LG+P EAE++ +EL G++Y + A ++ FG P + +S Sbjct 143 VKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPIQ--IKQLNFSE 200 Query 81 SLSKLLDK 88 S +K+ DK Sbjct 201 SSNKITDK 208 > tpv:TP04_0762 proteosome subunit; K03036 26S proteasome regulatory subunit N6 Length=634 Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 0/87 (0%) Query 4 LRKRVIQHNLRVLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTV 63 L +++ N+ + YSV+ +A L + E+ E +L+E+ L ID+ RT+ Sbjct 538 LYDSLLERNILRILKPYSVVQCDFIAQKLQLTSEKVEKKLAEMILDKRLNGTIDQGTRTL 597 Query 64 AFGKPKTDLVVLEEWSSSLSKLLDKVD 90 + E+ S SL+ + + ++ Sbjct 598 EIYDDVVIHPIYEDVSKSLTHMTEVIE 624 > pfa:PF11_0303 26S proteasome regulatory complex subunit, putative; K03037 26S proteasome regulatory subunit N7 Length=393 Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Query 23 IHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSSSL 82 + L+ +A G+ EE E+E+S + G L KID+ ++ +P E ++ Sbjct 318 VTLKNMAFAFGVSEEFIENEISSFIANGKLNCKIDKVNGSIESNQPN-------ERNTMY 370 Query 83 SKLLDKVDLCCHMIQK 98 + K D+ + IQK Sbjct 371 QNTIKKGDILLNRIQK 386 > xla:380154 p44s10; hypothetical protein MGC53209; K03037 26S proteasome regulatory subunit N7 Length=389 Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Query 16 LCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVL 75 L +Y + L +A G+ E + ELS +AG L+ KID+ V +P + Sbjct 307 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS----- 361 Query 76 EEWSSSLSKLLDKVDLCCHMIQK 98 + W + + + DL + +QK Sbjct 362 KNW--QYQETIKRGDLLLNRVQK 382 > cpv:cgd8_1020 hypothetical protein Length=458 Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query 15 VLCANYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKI-----DRPARTVAFGKPK 69 VL N S ++ +L+GI + + SEL + +G L I D+ RT + Sbjct 245 VLSYNSSPFQFEK--NLMGIRRDSSNSELQRIVRSGRLSGSIVGNSYDKQYRTNSIATSI 302 Query 70 TDLVVLEEWSSS 81 +D+ +EE SS Sbjct 303 SDIFCMEEIKSS 314 > ath:AT4G24820 26S proteasome regulatory subunit, putative (RPN7); K03037 26S proteasome regulatory subunit N7 Length=387 Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 0/50 (0%) Query 19 NYSVIHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKP 68 +Y + ++ +A G+ + + ELS +AG L+ KID+ A + +P Sbjct 308 SYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRP 357 > cel:T06E6.13 fbxa-104; F-box A protein family member (fbxa-104) Length=444 Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 17/97 (17%) Query 23 IHLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSS-- 80 +HL+++ + GI EE ++ L L + + D P D+V LE+W + Sbjct 283 LHLEKI-NFKGINYEEIDTILRHLKTGVLKEISFDYKITNSTIIPPIGDMVYLEQWKNAE 341 Query 81 --------SLSKLLD------KVDLCCHMIQKERMVH 103 SL LLD +D+ CH + +++ Sbjct 342 NLCIHSHISLGSLLDHISHFHTIDILCHTFSRLQILQ 378 > dre:100331661 keratin 7-like Length=1134 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 10/78 (12%) Query 23 IHLQRVASLLGIP-------EEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVL 75 IHLQ A L+ +P E +AES S L G +YA I T+A +P+ L+VL Sbjct 386 IHLQHYALLIRVPVLELLTLEGKAESLQSML---GRMYAHISAETLTLALQRPQCLLLVL 442 Query 76 EEWSSSLSKLLDKVDLCC 93 + S L L C Sbjct 443 DGLEESQKLLCTPSTLIC 460 > ath:AT2G24490 RPA2; RPA2 (REPLICON PROTEIN A2); protein binding; K10739 replication factor A2 Length=279 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 0/35 (0%) Query 23 IHLQRVASLLGIPEEEAESELSELASAGVLYAKID 57 IH+ +A L IP+ + E + L G++Y+ ID Sbjct 236 IHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTID 270 > sce:YKL113C RAD27, ERC11, FEN1, RTH1; 5' to 3' exonuclease, 5' flap endonuclease, required for Okazaki fragment processing and maturation as well as for long-patch base-excision repair; member of the S. pombe RAD2/FEN1 family; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=382 Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Query 26 QRVASLLGIP----EEEAESELSELASAGVLYAKIDRPARTVAFGKP 68 Q++ L+GIP EAE++ +ELA G +YA T+ + P Sbjct 140 QKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMDTLCYRTP 186 > xla:394311 fen1-b, fen-1, mf1, rad2; flap structure-specific endonuclease 1; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=382 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Query 26 QRVASLLGIPEE----EAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSSS 81 +++ SL+GIP EAE+ + L AG +YA + FG P V+L ++S Sbjct 142 KKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALTFGTP----VLLRHLTAS 197 Query 82 LSKLL 86 +K L Sbjct 198 EAKKL 202 > ath:AT5G26680 endonuclease, putative; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=383 Score = 28.9 bits (63), Expect = 4.5, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query 26 QRVASLLGIP----EEEAESELSELASAGVLYAKIDRPARTVAFGKPK 69 +R+ L+G+P EAE++ + L +G +Y ++ FG PK Sbjct 143 KRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPK 190 > xla:394303 fen1-a, MGC196488, MGC196492, fen-1, fen1, mf1, rad2, xFEN1a; flap structure-specific endonuclease 1; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=382 Score = 28.1 bits (61), Expect = 6.2, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Query 26 QRVASLLGIPEE----EAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSSS 81 +++ +L+GIP EAE+ + L AG +YA + FG P V+L ++S Sbjct 142 KKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALTFGTP----VLLRHLTAS 197 Query 82 LSKLL 86 +K L Sbjct 198 EAKKL 202 > cel:Y39A1A.1 hypothetical protein Length=386 Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 9/73 (12%) Query 4 LRKRVIQHNLRVL----CANY-SVIHLQRVASLLGIPEEEAESELSEL----ASAGVLYA 54 LR+ +Q +L+ + C++Y +V + + GI + E + + + L S+ ++ Sbjct 258 LRRGTVQAHLQCMAFSPCSSYLAVASDKGTLHMFGIRDAEPQKKKNVLERSRGSSSIVKI 317 Query 55 KIDRPARTVAFGK 67 ++DRP + FGK Sbjct 318 QLDRPVMAIGFGK 330 > bbo:BBOV_IV009620 23.m05751; hypothetical protein Length=1201 Score = 27.7 bits (60), Expect = 8.1, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%) Query 2 TLLRKRVIQHNLRVLCANYSVIHLQRVAS 30 T+L R ++ +L+ C+N VI + R+AS Sbjct 686 TVLEAREVKESLKYACSNSKVISISRIAS 714 > tgo:TGME49_030830 dynein heavy chain, putative (EC:3.1.3.48) Length=4713 Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 0/31 (0%) Query 30 SLLGIPEEEAESELSELASAGVLYAKIDRPA 60 SLL +PE+EAE E ++S G+++ RP+ Sbjct 719 SLLVVPEKEAEPEHFTISSTGIVHICPGRPS 749 > hsa:10349 ABCA10, EST698739; ATP-binding cassette, sub-family A (ABC1), member 10; K05652 ATP-binding cassette, subfamily A (ABC1), member 10 Length=1543 Score = 27.7 bits (60), Expect = 8.9, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 0/65 (0%) Query 24 HLQRVASLLGIPEEEAESELSELASAGVLYAKIDRPARTVAFGKPKTDLVVLEEWSSSLS 83 HL+ A++ G+ +E+A +S L A L ++ P +T++ G + VL + Sbjct 1301 HLELYAAVKGLGKEDAALSISRLVEALKLQEQLKAPVKTLSEGIKRKLCFVLSILGNPSV 1360 Query 84 KLLDK 88 LLD+ Sbjct 1361 VLLDE 1365 > tgo:TGME49_092220 26S proteasome non-ATPase regulatory subunit, putative ; K03033 26S proteasome regulatory subunit N3 Length=558 Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query 4 LRKRVIQHNLRVLCANYSVIHLQRVASLLGIPE-EEAESELSELASAGVLYAKID 57 L VI+ LR++ +YS I L+ VA LG+ AE+ +++ GV+ A ID Sbjct 419 LHHNVIRAGLRLISLSYSRISLEDVAEKLGLDSAASAENIVAKAILDGVIEAAID 473 > mmu:14156 Fen1, AW538437; flap structure specific endonuclease 1; K04799 flap endonuclease-1 [EC:3.-.-.-] Length=380 Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Query 30 SLLGIP----EEEAESELSELASAGVLYAKIDRPARTVAFGKP 68 SL+GIP EAE+ + LA AG +YA + FG P Sbjct 146 SLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDMDCLTFGSP 188 Lambda K H 0.320 0.129 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2027872200 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40