bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0632_orf1
Length=204
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_119950 rRNA-processing protein FCF1, putative ; K14... 264 2e-70
bbo:BBOV_II006440 18.m06530; hypothetical protein; K14566 U3 s... 232 5e-61
cpv:cgd7_2290 hypothetical protein ; K14566 U3 small nucleolar... 220 2e-57
dre:550264 fcf1, zgc:110288; FCF1 small subunit (SSU) processo... 219 5e-57
xla:414656 fcf1, MGC81107; FCF1 small subunit (SSU) processome... 212 7e-55
tpv:TP02_0609 hypothetical protein; K14566 U3 small nucleolar ... 211 1e-54
hsa:100507758 rRNA-processing protein FCF1 homolog; K14566 U3 ... 209 4e-54
hsa:51077 FCF1, Bka, C14orf111, MGC99629; FCF1 small subunit (... 209 4e-54
mmu:73736 Fcf1, 1110008B24Rik; FCF1 small subunit (SSU) proces... 209 6e-54
mmu:633406 rRNA-processing protein FCF1 homolog; K14566 U3 sma... 206 6e-53
sce:YDR339C FCF1, UTP24; Fcf1p; K14566 U3 small nucleolar RNA-... 198 1e-50
pfa:MAL8P1.67 UTP24; nucleolar preribosomal assembly protein; ... 196 4e-50
cel:F30A10.9 hypothetical protein; K14566 U3 small nucleolar R... 192 7e-49
ath:AT2G46230 hypothetical protein; K14566 U3 small nucleolar ... 175 1e-43
ath:AT1G26530 hypothetical protein; K14566 U3 small nucleolar ... 149 7e-36
cel:C34E10.10 hypothetical protein; K14773 U3 small nucleolar ... 84.0 4e-16
dre:550514 utp23, fc04b12, wu:fc04b12, zgc:110214; UTP23, smal... 74.3 2e-13
hsa:84294 UTP23, C8orf53, MGC14595; UTP23, small subunit (SSU)... 72.8 7e-13
mmu:78581 Utp23, 1700010I21Rik, AI662478, BB238373, D530033C11... 68.9 1e-11
xla:443845 utp23, MGC83220; UTP23, small subunit (SSU) process... 68.2 2e-11
sce:YOR004W UTP23; Essential nucleolar protein that is a compo... 59.7 7e-09
ath:AT2G34570 MEE21; MEE21 (maternal effect embryo arrest 21);... 52.0 1e-06
bbo:BBOV_III002040 17.m07198; hypothetical protein; K14773 U3 ... 51.2 3e-06
mmu:100043871 Gm4701; predicted gene 4701 45.8
dre:100331517 UTP23, small subunit (SSU) processome component,... 42.0 0.001
cpv:cgd8_4870 tRNA synthetase class II 36.6 0.059
ath:AT4G30490 AFG1-like ATPase family protein 30.8 3.7
> tgo:TGME49_119950 rRNA-processing protein FCF1, putative ; K14566
U3 small nucleolar RNA-associated protein 24
Length=201
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 146/172 (84%), Gaps = 0/172 (0%)
Query 26 QKKEAKKQEKRRESETALKEHVQHNPSQFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVL 85
+K+A ++ K+++ E ++EHVQ N S FF YNTNLVPPYQV+VDTNF+N A+Q K DV+
Sbjct 28 DEKKALREAKKKQREETIREHVQANSSMFFLYNTNLVPPYQVIVDTNFVNAAVQIKTDVI 87
Query 86 QGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQ 145
+GL+ CLVAKC C+TDC VAELEKLGHRYRLAL LAKD R KRL C H GTYADDCIV+
Sbjct 88 KGLMDCLVAKCIPCITDCAVAELEKLGHRYRLALALAKDRRFKRLTCCHPGTYADDCIVR 147
Query 146 RVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAVERLPEAITALPAS 197
RVTEHKCYLVATNDKDLKRRIRKIPGVPI+Y+K +FAVERLP+AI ++P++
Sbjct 148 RVTEHKCYLVATNDKDLKRRIRKIPGVPIIYVKNHKFAVERLPDAIASVPSA 199
> bbo:BBOV_II006440 18.m06530; hypothetical protein; K14566 U3
small nucleolar RNA-associated protein 24
Length=190
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 139/187 (74%), Gaps = 7/187 (3%)
Query 7 FPPTRRYMSTAQLRISCFRQKKEAKKQEKRRESETALKEHVQHNPSQFFSYNTNLVPPYQ 66
F +R MS RI+ K K++K A K H FF+YN NLVPPYQ
Sbjct 10 FAEVKRRMSPKDSRIA---NVKAIVKEDKVEPLVEAPKVH----SGMFFNYNENLVPPYQ 62
Query 67 VLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKDPR 126
V+VDTNF+N +IQ K D+ +G++ CL+AKC VCVTDCV+AELEKLGHRYRLAL L KDPR
Sbjct 63 VIVDTNFVNASIQNKLDLHKGMLDCLIAKCIVCVTDCVIAELEKLGHRYRLALQLVKDPR 122
Query 127 IKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAVER 186
+ RL C+H GTYADDCIV+RVT HKCY+VATND+DLKRRIR+IPGVPI+Y+ ++A+ER
Sbjct 123 VSRLTCVHTGTYADDCIVERVTTHKCYIVATNDRDLKRRIRRIPGVPIMYVANHKYAIER 182
Query 187 LPEAITA 193
+P +IT+
Sbjct 183 IPMSITS 189
> cpv:cgd7_2290 hypothetical protein ; K14566 U3 small nucleolar
RNA-associated protein 24
Length=156
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 121/147 (82%), Gaps = 0/147 (0%)
Query 52 SQFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKL 111
S FF+YN NL PP+ +L+DTNFIN +IQ K D+ +G + CLVAKC C+TDCV+ ELEK+
Sbjct 10 SLFFNYNNNLGPPFHILLDTNFINFSIQHKLDIFKGTMDCLVAKCIPCITDCVIGELEKM 69
Query 112 GHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPG 171
GHRY LAL LA+DPR KRL CLH GTYADDCIVQRVTEHKCY+V TND +LKRRIR+IPG
Sbjct 70 GHRYNLALKLARDPRFKRLHCLHKGTYADDCIVQRVTEHKCYIVGTNDTELKRRIRRIPG 129
Query 172 VPIVYLKGRRFAVERLPEAITALPASK 198
VPI+Y+ ++++ERLPE++ ++P K
Sbjct 130 VPIMYVTNHKYSIERLPESLVSVPLKK 156
> dre:550264 fcf1, zgc:110288; FCF1 small subunit (SSU) processome
component homolog (S. cerevisiae); K14566 U3 small nucleolar
RNA-associated protein 24
Length=198
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 139/189 (73%), Gaps = 5/189 (2%)
Query 7 FPPTRRYMSTAQLRISCFRQKKEAKKQEKRRESETALKEH-VQHNPS-QFFSYNTNLVPP 64
+ +R +S RI ++K AK Q+K++E +A+KE + PS FF YNT L PP
Sbjct 10 YATMKRMISLKDQRI---KEKDRAKTQKKKKEDPSAIKEQEIAKYPSCLFFQYNTQLGPP 66
Query 65 YQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKD 124
Y +LVDTNFIN +I+ K DV+Q ++ CL AKC C+TDCV+AELEKLG +YR+AL +AKD
Sbjct 67 YYILVDTNFINFSIKAKLDVVQSMMDCLYAKCVPCITDCVMAELEKLGMKYRVALRIAKD 126
Query 125 PRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAV 184
PR RL C H GTYADDC+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+Y+ R+ +
Sbjct 127 PRFDRLPCSHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNI 186
Query 185 ERLPEAITA 193
ER+P+ A
Sbjct 187 ERMPDDYGA 195
> xla:414656 fcf1, MGC81107; FCF1 small subunit (SSU) processome
component homolog; K14566 U3 small nucleolar RNA-associated
protein 24
Length=197
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Query 24 FRQKKEAKKQEKRRESETALKE-HVQHNPS-QFFSYNTNLVPPYQVLVDTNFINGAIQTK 81
++K AK Q K+ E TA+KE + PS FF YNTNL PPY +LVDTNFIN +I+ K
Sbjct 24 IKEKDRAKIQPKK-EDPTAIKEREIPQLPSCLFFQYNTNLGPPYYILVDTNFINFSIKAK 82
Query 82 QDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADD 141
D++Q ++ CL AKC C+TDCV+AELEKLG +YR+AL +AKDP +RL C H GTYADD
Sbjct 83 LDLVQSMMDCLYAKCVPCITDCVMAELEKLGQKYRVALRIAKDPSFERLPCSHPGTYADD 142
Query 142 CIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAVERLPEAITA 193
C+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+Y+ R+ +ER+P+ A
Sbjct 143 CLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGA 194
> tpv:TP02_0609 hypothetical protein; K14566 U3 small nucleolar
RNA-associated protein 24
Length=201
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 129/174 (74%), Gaps = 12/174 (6%)
Query 31 KKQEKRRESETALKEHVQHNPSQFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLIT 90
K+ EK+ E + +V H+ FF+YN NLVPP+QV+VDTNF+N +IQ K D+ + ++
Sbjct 28 KEIEKKEEGPKLTQSNVVHS-GMFFNYNENLVPPFQVIVDTNFVNSSIQNKLDLHKSMMD 86
Query 91 CLVAKCD-----------VCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYA 139
L++K +CVTDC++ ELEKLGHRYRLAL L KDPRIKRLKC H GTY
Sbjct 87 LLLSKFTAAEIEEIFLGIICVTDCIIGELEKLGHRYRLALQLVKDPRIKRLKCTHKGTYV 146
Query 140 DDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAVERLPEAITA 193
DDCIV+RV HKCY+VATNDKDLKRRIRKIPGVPI+Y+K ++ +ER+P +IT+
Sbjct 147 DDCIVERVQLHKCYIVATNDKDLKRRIRKIPGVPIMYVKRHQYQIERIPLSITS 200
> hsa:100507758 rRNA-processing protein FCF1 homolog; K14566 U3
small nucleolar RNA-associated protein 24
Length=198
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 138/189 (73%), Gaps = 5/189 (2%)
Query 10 TRRYMSTAQ---LRISCFRQKKEAKKQEKRRESETALKEH--VQHNPSQFFSYNTNLVPP 64
TR+Y + + LR ++K K ++K ++ +ALKE QH FF YNT L PP
Sbjct 7 TRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPP 66
Query 65 YQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKD 124
Y +LVDTNFIN +I+ K D++Q ++ CL AKC C+TDCV+AE+EKLG +YR+AL +AKD
Sbjct 67 YHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKD 126
Query 125 PRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAV 184
PR +RL C H GTYADDC+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+Y+ R+ +
Sbjct 127 PRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNI 186
Query 185 ERLPEAITA 193
ER+P+ A
Sbjct 187 ERMPDDYGA 195
> hsa:51077 FCF1, Bka, C14orf111, MGC99629; FCF1 small subunit
(SSU) processome component homolog (S. cerevisiae); K14566
U3 small nucleolar RNA-associated protein 24
Length=198
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 138/189 (73%), Gaps = 5/189 (2%)
Query 10 TRRYMSTAQ---LRISCFRQKKEAKKQEKRRESETALKEH--VQHNPSQFFSYNTNLVPP 64
TR+Y + + LR ++K K ++K ++ +ALKE QH FF YNT L PP
Sbjct 7 TRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPP 66
Query 65 YQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKD 124
Y +LVDTNFIN +I+ K D++Q ++ CL AKC C+TDCV+AE+EKLG +YR+AL +AKD
Sbjct 67 YHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKD 126
Query 125 PRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAV 184
PR +RL C H GTYADDC+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+Y+ R+ +
Sbjct 127 PRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNI 186
Query 185 ERLPEAITA 193
ER+P+ A
Sbjct 187 ERMPDDYGA 195
> mmu:73736 Fcf1, 1110008B24Rik; FCF1 small subunit (SSU) processome
component homolog (S. cerevisiae); K14566 U3 small nucleolar
RNA-associated protein 24
Length=198
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 137/189 (72%), Gaps = 5/189 (2%)
Query 10 TRRYMSTAQ---LRISCFRQKKEAKKQEKRRESETALKEH--VQHNPSQFFSYNTNLVPP 64
TR+Y + + LR ++K K ++K ++ +ALKE QH FF YNT L PP
Sbjct 7 TRKYATMKRMLSLRDERLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPP 66
Query 65 YQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKD 124
Y +LVDTNFIN +I+ K D++Q ++ CL AKC C+TDCV+AE+EKLG ++R+AL +AKD
Sbjct 67 YHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRVALRIAKD 126
Query 125 PRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAV 184
PR RL C H GTYADDC+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+YL R+ +
Sbjct 127 PRFDRLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLSNHRYNI 186
Query 185 ERLPEAITA 193
ER+P+ A
Sbjct 187 ERMPDDYGA 195
> mmu:633406 rRNA-processing protein FCF1 homolog; K14566 U3 small
nucleolar RNA-associated protein 24
Length=198
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 135/189 (71%), Gaps = 5/189 (2%)
Query 10 TRRYMSTAQ---LRISCFRQKKEAKKQEKRRESETALKEH--VQHNPSQFFSYNTNLVPP 64
TR+Y + + LR ++K K ++K ++ +ALKE QH FF YNT L PP
Sbjct 7 TRKYATMKRMLSLRDERLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPP 66
Query 65 YQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKD 124
Y +LV TNFIN +I+ K D++Q ++ CL AKC C+TDCV+AE+EKLG YR+AL +AKD
Sbjct 67 YHILVRTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQTYRVALRIAKD 126
Query 125 PRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAV 184
PR RL C H GTYADDC+VQRVT+HKCY+VAT D+DLKRRIRKIPGVPI+YL R+ +
Sbjct 127 PRFDRLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLSNHRYNI 186
Query 185 ERLPEAITA 193
ER+P+ A
Sbjct 187 ERMPDDYGA 195
> sce:YDR339C FCF1, UTP24; Fcf1p; K14566 U3 small nucleolar RNA-associated
protein 24
Length=189
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 123/164 (75%), Gaps = 0/164 (0%)
Query 28 KEAKKQEKRRESETALKEHVQHNPSQFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQG 87
K+ ++ K +E + Q + + FF YN + PPYQVL+DTNFIN +IQ K D+++G
Sbjct 26 KKNQENIKTKEDPELTRNIPQVSSALFFQYNQAIKPPYQVLIDTNFINFSIQKKVDIVRG 85
Query 88 LITCLVAKCDVCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRV 147
++ CL+AKC+ +TDCV+AELEKLG +YR+AL LA+DPRIKRL C H GTYADDC+V RV
Sbjct 86 MMDCLLAKCNPLITDCVMAELEKLGPKYRIALKLARDPRIKRLSCSHKGTYADDCLVHRV 145
Query 148 TEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGRRFAVERLPEAI 191
+HKCY+VATND LK+RIRKIPG+P++ + G + +E+LP+
Sbjct 146 LQHKCYIVATNDAGLKQRIRKIPGIPLMSVGGHAYVIEKLPDVF 189
> pfa:MAL8P1.67 UTP24; nucleolar preribosomal assembly protein;
K14566 U3 small nucleolar RNA-associated protein 24
Length=198
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 109/138 (78%), Gaps = 0/138 (0%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
FF+YN NL PPY +++DTNFIN +IQ K D+++G L+AKC++ VTDCV+ E+EKLG
Sbjct 58 FFNYNENLCPPYNIILDTNFINSSIQYKIDIIKGCSEVLLAKCNIFVTDCVIGEMEKLGQ 117
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATNDKDLKRRIRKIPGVP 173
RY L L L KDPR KRL C H GTYADDCIV RVTE +CY++ATND+DLK R+RKIPGVP
Sbjct 118 RYSLGLKLIKDPRFKRLTCNHKGTYADDCIVNRVTESRCYIIATNDRDLKIRLRKIPGVP 177
Query 174 IVYLKGRRFAVERLPEAI 191
I+Y K ++ +ERLP+ I
Sbjct 178 ILYAKNFKYKIERLPDNI 195
> cel:F30A10.9 hypothetical protein; K14566 U3 small nucleolar
RNA-associated protein 24
Length=196
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 118/156 (75%), Gaps = 1/156 (0%)
Query 38 ESETALKEHVQHNPSQFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCD 97
E E L + + + F YNT L PP+ V+VDTNF+N A++ + D+ QG + CL AK
Sbjct 39 EQELKLVRAPKISSAMFMKYNTQLGPPFHVIVDTNFVNFAVKNRIDMFQGFMDCLFAKTI 98
Query 98 VCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKCYLVAT 157
V TDCV+AELEK+ R+++AL + KDPR++RLKC H GTYADDC+VQRVT+HKCY+VAT
Sbjct 99 VYATDCVLAELEKV-RRFKIALKVLKDPRVQRLKCEHKGTYADDCLVQRVTQHKCYIVAT 157
Query 158 NDKDLKRRIRKIPGVPIVYLKGRRFAVERLPEAITA 193
D+DLKRRIRKIPGVPI+Y+ RF++ER+P+A A
Sbjct 158 CDRDLKRRIRKIPGVPIMYIVNHRFSIERMPDAYGA 193
> ath:AT2G46230 hypothetical protein; K14566 U3 small nucleolar
RNA-associated protein 24
Length=181
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query 37 RESETALKEHVQHNPSQ-FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAK 95
++ T L +V P+ FFSYN+ LVPPY+VLVDTNFIN +IQ K D+ +G+ CL A
Sbjct 34 KKDLTELPRNVPSVPAGLFFSYNSTLVPPYRVLVDTNFINFSIQNKIDLEKGMRDCLYAN 93
Query 96 CDVCVTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKCYLV 155
C C+TDCV+AELEKLG +YR+AL +AKDP +RL C+H GTYADDC+V RVT+HKC++V
Sbjct 94 CTPCITDCVMAELEKLGQKYRVALRIAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIV 153
Query 156 ATNDKDLKRRIRKIPGV----PIVYLKG 179
AT D+DLKRRIRK+ V +VY+ G
Sbjct 154 ATCDRDLKRRIRKVKIVCCISALVYIHG 181
> ath:AT1G26530 hypothetical protein; K14566 U3 small nucleolar
RNA-associated protein 24
Length=178
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 19/151 (12%)
Query 41 TALKEHVQHNPSQ-FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVC 99
T L +V PS FFS+N++LVPPY+VLVDTNFIN +IQ K D+ +G++
Sbjct 38 TELPRNVPSVPSGLFFSHNSSLVPPYRVLVDTNFINFSIQNKIDLEKGMMV--------- 88
Query 100 VTDCVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKCYLVATND 159
V ++ L Y L +AKDPR +RL C+ GTYADDC+V RVT+HKC++VAT D
Sbjct 89 ----FVRKMHSL--YYGL---IAKDPRFERLPCVLKGTYADDCLVDRVTQHKCFIVATCD 139
Query 160 KDLKRRIRKIPGVPIVYLKGRRFAVERLPEA 190
+DLKRRIRKIPGVPI+Y+ R++++E+LPEA
Sbjct 140 RDLKRRIRKIPGVPIMYVTQRKYSIEKLPEA 170
> cel:C34E10.10 hypothetical protein; K14773 U3 small nucleolar
RNA-associated protein 23
Length=232
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
F+ YN V PY+VLVD F N A+Q K ++ + + L + + T+CV+ ELEK G
Sbjct 15 FYKYNYKFVAPYRVLVDGTFCNAALQEKLNLAEQIPKYLTEETHLMTTNCVLKELEKFGP 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGT-YADDC---IVQRVTEHKC-YLVATNDKDLKRRIRK 168
A +AK I +C H+ A DC + +R K YL+AT D +L ++R
Sbjct 75 LLYGAFVIAKQFEIA--ECTHSTPRAASDCLAHLARRAASGKTKYLIATQDDELTEKLRA 132
Query 169 IPGVPIVYLKGRRFAVERLPEAITALPASKSGISK 203
I G PI+Y+K + ++ + E A+K+G SK
Sbjct 133 IVGTPIMYIKFKTVLLDNISE------ATKAGCSK 161
> dre:550514 utp23, fc04b12, wu:fc04b12, zgc:110214; UTP23, small
subunit (SSU) processome component, homolog (yeast); K14773
U3 small nucleolar RNA-associated protein 23
Length=249
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
F+ YN + P+Q+L+D F A++ K + + L L+ + +C T+C + ELE L
Sbjct 15 FYKYNFSFREPFQILIDGTFCQAALKNKIQIKEQLPKYLMGEIQLCTTNCALKELESLAK 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKC--YLVATNDKDLKRRIRKIPG 171
A + + +I++ K + A +C++ + E Y +AT D+ L ++KIPG
Sbjct 75 DLYGAKLILQRFQIRKCKHMKDPVPASECLLSMLAETNPHHYFIATQDQQLTTALKKIPG 134
Query 172 VPIVYL 177
VP++Y+
Sbjct 135 VPLLYI 140
> hsa:84294 UTP23, C8orf53, MGC14595; UTP23, small subunit (SSU)
processome component, homolog (yeast); K14773 U3 small nucleolar
RNA-associated protein 23
Length=249
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
FF N + PYQ+L+D F A++ + + + L L+ + +C T CV+ ELE LG
Sbjct 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKC--YLVATNDKDLKRRIRKIPG 171
A +A+ +++ +C++ V E Y VAT D++L +++K PG
Sbjct 75 DLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVATQDQNLSVKVKKKPG 134
Query 172 VPIVYLKGRRFAVER-LPEAITALPASKSG 200
VP++++ +++ P+ I + A +SG
Sbjct 135 VPLMFIIQNTMVLDKPSPKTIAFVKAVESG 164
> mmu:78581 Utp23, 1700010I21Rik, AI662478, BB238373, D530033C11Rik;
UTP23, small subunit (SSU) processome component, homolog
(yeast); K14773 U3 small nucleolar RNA-associated protein
23
Length=249
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
FF N + PYQ+L+D F A++ + + L L+ + +C T CV+ ELE LG
Sbjct 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQLPRYLMGETQLCTTRCVLKELETLGK 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKC--YLVATNDKDLKRRIRKIPG 171
A +A+ +++ + +C++ V E Y VAT D++L ++++ PG
Sbjct 75 ELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVATQDQNLSVKVKRTPG 134
Query 172 VPIVYL 177
+P++++
Sbjct 135 IPLMFI 140
> xla:443845 utp23, MGC83220; UTP23, small subunit (SSU) processome
component, homolog; K14773 U3 small nucleolar RNA-associated
protein 23
Length=243
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
F+ +N + PYQVL+D F A++ K + + L L+ + +C + CV+ ELE LG
Sbjct 15 FYRFNFGVREPYQVLLDGTFCQAALKNKIQIKEQLPKYLMGEVQLCTSHCVIKELESLGK 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKC--YLVATNDKDLKRRIRKIPG 171
A +A+ +++ CI+ ++ Y +AT D++L +++K G
Sbjct 75 ELYGAKLIAQRFQVRSCSHFQDPVSGSACILSLTADNNPHHYFIATQDQELATKVKKRAG 134
Query 172 VPIVYL 177
VP++++
Sbjct 135 VPLMFI 140
> sce:YOR004W UTP23; Essential nucleolar protein that is a component
of the SSU (small subunit) processome involved in 40S
ribosomal subunit biogenesis; has homology to PINc domain protein
Fcf1p, although the PINc domain of Utp23p is not required
for function; K14773 U3 small nucleolar RNA-associated
protein 23
Length=254
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query 55 FSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGHR 114
+S+ PYQVLVD + + ++ GL L A V +T C + L + R
Sbjct 16 YSHTFKFREPYQVLVDNQLVLECNNSNFNLPSGLKRTLQADVKVMITQCCIQALYET--R 73
Query 115 YRLALHLAKDPRIKRLKCLHAGTYAD-----DCI-----VQRVTEHKCYLVATNDKDLKR 164
A++LAK + +R +C H ++ D +CI + +H+ Y+VA+ D DL+R
Sbjct 74 NDGAINLAK--QFERRRCNH--SFKDPKSPAECIESVVNISGANKHR-YVVASQDIDLRR 128
Query 165 RIRKIPGVPIVYLKGRRFAVERLPEA 190
++R +PGVP+++L +E L A
Sbjct 129 KLRTVPGVPLIHLTRSVMVMEPLSTA 154
> ath:AT2G34570 MEE21; MEE21 (maternal effect embryo arrest 21);
K14773 U3 small nucleolar RNA-associated protein 23
Length=281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query 53 QFFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAK-CDVCVTDCVVAELEKL 111
+FF+ PY+VL D F++ + + ++ L+ + T CV+AELEKL
Sbjct 14 RFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLFTTRCVIAELEKL 73
Query 112 GHRYRLALHLAKDPRIKRLKCLH-AGTYADDCIVQRV----TEHKCYLVATNDKDLKRRI 166
G + +L A+ + C H AD+C+ + + TEH + + T D + +R++
Sbjct 74 GKDFAESLEAAQT--LNTATCEHEEAKTADECLSEVIGVQNTEH--FFLGTQDAEFRRKL 129
Query 167 RKIPGVPIVY 176
++ VP+V+
Sbjct 130 QQESIVPLVF 139
> bbo:BBOV_III002040 17.m07198; hypothetical protein; K14773 U3
small nucleolar RNA-associated protein 23
Length=256
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
F+ NL PY++LVD +F A++ K ++ + L L VT C++ EL +G
Sbjct 15 FYRQLVNLTVPYRILVDGSFAFAALKHKVNIKEHLTELLGDTTHTYVTSCIIDELRGMGE 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGT----YADDCIVQRVTEH--KCYLVATNDKDLKRRIR 167
A+ K R +RL+C H + + CI V++ + VAT D+ + +R
Sbjct 75 EMSGAVLALK--RCQRLRCNHQPSDKAPNSRRCITSAVSDGNPQKLFVATQDQTMISWLR 132
Query 168 KIPGVPIVYLKGRRFAVERLP 188
+ VPI+ +E P
Sbjct 133 ENGCVPILKFNNNIVFLEHPP 153
> mmu:100043871 Gm4701; predicted gene 4701
Length=269
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query 54 FFSYNTNLVPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDVCVTDCVVAELEKLGH 113
FF N + PY +L+ + F A+ + L L+ K +C CV+ ELE G
Sbjct 15 FFRNNFGVCEPYPILLASTFCQVALWGCIQLRDQLPCYLMGKPQLCTIRCVLRELETRGK 74
Query 114 RYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRV--------TEHKCYLVATNDKDLKRR 165
A +A+ +++ + +C++ V H Y VAT D++L +
Sbjct 75 ELYGAKLIAQKSQVRNCPHFKSPASGSECLLCMVDGWVGGWGNPHH-YFVATQDQNLSVK 133
Query 166 IRKIPGVPIVYL 177
+++ +P++++
Sbjct 134 VKRTSRIPLMFI 145
> dre:100331517 UTP23, small subunit (SSU) processome component,
homolog
Length=259
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query 103 CVVAELEKLGHRYRLALHLAKDPRIKRLKCLHAGTYADDCIVQRVTEHKC--YLVATNDK 160
C + ELE L A + + +I++ K + A +C++ + E Y +AT D+
Sbjct 66 CALKELESLAKDLYGAKLILQRFQIRKCKHMKDPVPASECLLSMLAETNPHHYFIATQDQ 125
Query 161 DLKRRIRKIPGVPIVYL 177
L ++KIPGVP++Y+
Sbjct 126 QLTTALKKIPGVPLLYI 142
> cpv:cgd8_4870 tRNA synthetase class II
Length=216
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%), Gaps = 0/38 (0%)
Query 143 IVQRVTEHKCYLVATNDKDLKRRIRKIPGVPIVYLKGR 180
++ + K ++VA+ D L++++ K+PGVP++YL +
Sbjct 124 VISKDNNSKKFIVASQDPLLRKKLHKVPGVPLIYLNNQ 161
> ath:AT4G30490 AFG1-like ATPase family protein
Length=497
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query 42 ALKEHVQHNPSQFFSYNTNL---VPPYQVLVDTNFINGAIQTKQDVLQGLITCLVAKCDV 98
AL+ + + S F+S + L V Q L++TN N ++ ++ + +GL V D
Sbjct 16 ALRNNQERYSSTFYSKSRKLLIGVNQNQALLNTNTDNSSLYSRSSIFRGLSAEAVEAADP 75
Query 99 CVTDCVVAELEKLG 112
T V+++ + G
Sbjct 76 ATTRVTVSDVNRTG 89
Lambda K H
0.323 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6253620652
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40