bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0699_orf3 Length=169 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_014820 DNA repair enzyme, putative ; K12840 splicin... 163 3e-40 ath:AT1G30480 DRT111; DRT111; nucleic acid binding / nucleotid... 105 7e-23 dre:393889 rbm17, MGC55840, zgc:55840; RNA binding motif prote... 104 2e-22 hsa:84991 RBM17, DKFZp686F13131, MGC14439, SPF45; RNA binding ... 100 2e-21 mmu:76938 Rbm17, 2700027J02Rik; RNA binding motif protein 17; ... 100 2e-21 xla:733282 rbm17; RNA binding motif protein 17 87.0 xla:447356 MGC130690; MGC84102 protein; K12840 splicing factor 45 84.3 pfa:PF14_0513 RNA binding protein, putative; K12840 splicing f... 83.6 3e-16 dre:100331631 RNA binding motif protein 17-like 74.7 1e-13 cpv:cgd1_2730 Ro ribonucleoprotein-binding protein 1, RNA bind... 71.2 2e-12 dre:562370 puf60a, fc21a05, wu:fc21a05, wu:fi43a08; poly-U bin... 68.2 1e-11 mmu:67959 Puf60, 2410104I19Rik, 2810454F19Rik, SIAHBP1; poly-U... 67.4 2e-11 hsa:22827 PUF60, FIR, FLJ31379, RoBPI, SIAHBP1; poly-U binding... 65.1 1e-10 dre:415211 puf60b, SIAHBP1, fe37c05, repressor, si:ch211-12p8.... 64.3 2e-10 tgo:TGME49_002770 RNA-binding protein, putative ; K12838 poly(... 60.8 2e-09 cel:Y47G6A.20 rnp-6; RNP (RRM RNA binding domain) containing f... 57.4 2e-08 tgo:TGME49_121630 hypothetical protein 55.5 9e-08 ath:AT1G60830 U2 snRNP auxiliary factor large subunit, putative 54.3 2e-07 ath:AT1G60900 U2 snRNP auxiliary factor large subunit, putativ... 52.4 7e-07 cel:F58B3.7 hypothetical protein; K12840 splicing factor 45 51.2 ath:AT4G36690 ATU2AF65A; RNA binding / nucleic acid binding / ... 49.7 4e-06 pfa:PF14_0656 U2 snRNP auxiliary factor, putative; K12837 spli... 47.4 2e-05 cpv:cgd7_5220 splicing factor with 3 RRM domains ; K13091 RNA-... 47.0 3e-05 tpv:TP03_0201 hypothetical protein 44.7 2e-04 tpv:TP04_0540 hypothetical protein 41.2 0.002 dre:402989 u2af2b, MGC77804, wu:fb73g02, zgc:77804; U2 small n... 40.8 0.002 mmu:16589 Uhmk1, 4732477C12Rik, 4930500M09Rik, AA673513, AI449... 40.4 0.003 cel:Y92C3B.2 uaf-1; U2AF splicing factor family member (uaf-1)... 40.4 0.003 dre:767721 uhmk1, MGC153241, zgc:153241; U2AF homology motif (... 39.7 0.005 tpv:TP04_0035 U2 small nuclear ribonucleoprotein, auxiliary fa... 38.9 0.009 bbo:BBOV_II004960 18.m06413; RNA recognition motif (RRM)-conta... 38.5 0.010 tpv:TP03_0691 splicing factor; K13091 RNA-binding protein 39 38.5 bbo:BBOV_IV007070 23.m05938; hypothetical protein 38.5 0.011 tgo:TGME49_108920 U2 small nuclear ribonucleoprotein auxiliary... 38.5 0.011 cel:C07A4.1 hypothetical protein 37.0 0.030 ath:AT2G16940 RNA recognition motif (RRM)-containing protein 37.0 0.034 tgo:TGME49_034520 U2 snRNP auxiliary factor or splicing factor... 36.6 0.039 dre:386806 cstf2, CstF-64, fb11e07, wu:fb11e07, zgc:56346, zgc... 36.6 0.040 mmu:83410 Cstf2t, 64kDa, C77975, tCstF-64, tauCstF-64; cleavag... 36.6 0.042 pfa:PF07_0066 conserved Plasmodium protein, unknown function 36.6 0.043 hsa:23283 CSTF2T, CstF-64T, DKFZp434C1013, KIAA0689; cleavage ... 36.6 0.044 pfa:MAL13P1.120 splicing factor, putative; K13091 RNA-binding ... 36.2 0.050 mmu:72459 Htatsf1, 1600023H17Rik, 2600017A12Rik, 2700077B20Rik... 36.2 0.051 xla:379871 cstf2, MGC53575, MGC83019, cstf-64; cleavage stimul... 36.2 0.056 hsa:1478 CSTF2, CstF-64; cleavage stimulation factor, 3' pre-R... 35.8 0.063 xla:380287 u2af2, MGC53441, u2af65; U2 small nuclear RNA auxil... 35.8 0.067 mmu:108062 Cstf2, 64kDa, C630034J23Rik, Cstf64; cleavage stimu... 35.8 0.071 tgo:TGME49_083740 mRNA processing protein, putative (EC:3.4.21... 35.8 0.076 hsa:27336 HTATSF1, TAT-SF1, dJ196E23.2; HIV-1 Tat specific fac... 34.7 0.16 cpv:cgd2_1480 splicing factor U2AF U2 SnRNP auxiliary factor l... 34.3 0.21 > tgo:TGME49_014820 DNA repair enzyme, putative ; K12840 splicing factor 45 Length=466 Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/130 (68%), Positives = 100/130 (76%), Gaps = 1/130 (0%) Query 34 CGVARQGQDVTTLGQVPRAVTFNMAPTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLL 93 GV QG +V RA FN PTR+LLLLNMVGRG+VD DLKEETEEEAAK GNLL Sbjct 335 SGVIVQGAEVVQAAAQVRA-QFNRPPTRVLLLLNMVGRGEVDEDLKEETEEEAAKFGNLL 393 Query 94 QVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 QV+I EAA PDD AVRIFCEYERKEEATRA +T NGR FGGRTVK +FY EER+ + DL Sbjct 394 QVKIVEAAEAPDDEAVRIFCEYERKEEATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDL 453 Query 154 RPDPEQEIDQ 163 P+PE+E D+ Sbjct 454 MPNPEEEADK 463 > ath:AT1G30480 DRT111; DRT111; nucleic acid binding / nucleotide binding; K12840 splicing factor 45 Length=387 Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 2/123 (1%) Query 37 ARQGQDVTTLGQVPRAVTFNMAPTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVR 96 A + + + +V ++V N PTR+LLL NMVG GQVD +L++E E K G + +V Sbjct 259 ASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQVDDELEDEVGGECGKYGTVTRVL 318 Query 97 IFE--AAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDLR 154 IFE P AVRIF ++ R EE T+AL+ +GR FGGRTV+A FY EE+F++ +L Sbjct 319 IFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELA 378 Query 155 PDP 157 P P Sbjct 379 PVP 381 > dre:393889 rbm17, MGC55840, zgc:55840; RNA binding motif protein 17; K12840 splicing factor 45 Length=418 Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 0/90 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVGRG+VD DL+ ET+EE K G +++ IFE +GV DD AVRIF E+ER Sbjct 320 PTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVRCVIFEISGVTDDEAVRIFLEFERV 379 Query 119 EEATRALLTFNGRAFGGRTVKAKFYSEERF 148 E A +A++ NGR FGGR VKA FY+ +RF Sbjct 380 ESAIKAVVDLNGRYFGGRVVKACFYNLDRF 409 > hsa:84991 RBM17, DKFZp686F13131, MGC14439, SPF45; RNA binding motif protein 17; K12840 splicing factor 45 Length=401 Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 0/95 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVG G+VD DL+ ET+EE K G + + IFE G PDD AVRIF E+ER Sbjct 303 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERV 362 Query 119 EEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E A +A++ NGR FGGR VKA FY+ ++F DL Sbjct 363 ESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL 397 > mmu:76938 Rbm17, 2700027J02Rik; RNA binding motif protein 17; K12840 splicing factor 45 Length=405 Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 0/95 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVG G+VD DL+ ET+EE K G + + IFE G PDD AVRIF E+ER Sbjct 307 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERV 366 Query 119 EEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E A +A++ NGR FGGR VKA FY+ ++F DL Sbjct 367 ESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL 401 > xla:733282 rbm17; RNA binding motif protein 17 Length=400 Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 0/95 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVG G+VD +L+ ET+EE K G + + IFE G PD+ AVRIF E+ER Sbjct 304 PTKVVLLQNMVGAGEVDEELEGETKEECEKYGKVAKCVIFEIPGAPDEEAVRIFLEFERV 363 Query 119 EEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E A +A++ NGR FGGR VKA FY+ ++F DL Sbjct 364 ESAIKAVVDLNGRYFGGRIVKAGFYNLDKFRTLDL 398 > xla:447356 MGC130690; MGC84102 protein; K12840 splicing factor 45 Length=400 Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 0/95 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVG G+VD +L+ ET+EE K G + + IFE G P++ AVRIF E+ER Sbjct 304 PTKVVLLRNMVGAGEVDEELEGETKEECEKYGKVGRCVIFEIPGAPEEEAVRIFLEFERV 363 Query 119 EEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E A +A++ NGR FGGR VKA FY+ ++F DL Sbjct 364 ESAIKAVVDLNGRYFGGRIVKASFYNLDKFRTLDL 398 > pfa:PF14_0513 RNA binding protein, putative; K12840 splicing factor 45 Length=511 Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats. Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 0/89 (0%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKE 119 TRI+ L N+V +VD LKEE EEEA+K GNLL + I + D AV+I+CEYE K+ Sbjct 416 TRIVHLTNLVTPEEVDETLKEEIEEEASKFGNLLNINIVVDKNLLDALAVKIYCEYESKD 475 Query 120 EATRALLTFNGRAFGGRTVKAKFYSEERF 148 +A AL TF GR F GR V+A F +EE + Sbjct 476 QAQNALNTFKGRTFAGRKVQASFATEEEY 504 > dre:100331631 RNA binding motif protein 17-like Length=418 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 0/65 (0%) Query 59 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERK 118 PT+++LL NMVGRG+VD DL+ ET+EE K G +++ IFE +GV DD AVRIF E+ER Sbjct 320 PTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVRCVIFEISGVTDDEAVRIFLEFERV 379 Query 119 EEATR 123 E A + Sbjct 380 ESAIK 384 > cpv:cgd1_2730 Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x RRM domains ; K12838 poly(U)-binding-splicing factor PUF60 Length=693 Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%) Query 48 QVPRAVTFNMAPTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGV--PD 105 Q+P A++ + + T I+LL NMVG ++D +LKEE + E +K G + VRI + + P Sbjct 585 QIPGAISGSASSTNIILLTNMVGPDEIDDELKEEVKIECSKYGKVYDVRIHVSNNISKPS 644 Query 106 DCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERF 148 D VRIF +E A A+ N R FGG V Y+ ER+ Sbjct 645 D-RVRIFVVFESPSMAQIAVPALNNRWFGGNQVFCSLYNTERY 686 > dre:562370 puf60a, fc21a05, wu:fc21a05, wu:fi43a08; poly-U binding splicing factor a; K12838 poly(U)-binding-splicing factor PUF60 Length=518 Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIF-EAAGVPDDCAV--RIFCEYE 116 + +++L NMVG +D DL+ E EE K G + +V I+ E G +D V +IF E+ Sbjct 420 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFS 479 Query 117 RKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E +A+ N R FGGR V A+ Y +ERF DL Sbjct 480 AASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDL 516 > mmu:67959 Puf60, 2410104I19Rik, 2810454F19Rik, SIAHBP1; poly-U binding splicing factor 60; K12838 poly(U)-binding-splicing factor PUF60 Length=499 Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIF-EAAGVPDDCA--VRIFCEYE 116 + +++L NMV +D DL+ E EE K G + +V I+ E G +D V+IF E+ Sbjct 401 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS 460 Query 117 RKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E +A+ NGR FGGR V A+ Y +ERF DL Sbjct 461 MASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDL 497 > hsa:22827 PUF60, FIR, FLJ31379, RoBPI, SIAHBP1; poly-U binding splicing factor 60KDa; K12838 poly(U)-binding-splicing factor PUF60 Length=516 Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 3/97 (3%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIF-EAAGVPDDCA--VRIFCEYE 116 + +++L NMV +D DL+ E EE K G + +V I+ E G +D V+IF E+ Sbjct 418 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS 477 Query 117 RKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E +A+ NGR F GR V A+ Y +ERF DL Sbjct 478 IASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDL 514 > dre:415211 puf60b, SIAHBP1, fe37c05, repressor, si:ch211-12p8.2, si:zc12p8.2, wu:fb33e11, wu:fe37c05, zgc:86806; poly-U binding splicing factor b Length=502 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 3/97 (3%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIF-EAAGVPDDCA--VRIFCEYE 116 + +++L NMVG +D DL+ E EE K G + +V I+ E G DD V+IF E+ Sbjct 404 STVMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQERQGEEDDAEIIVKIFVEFS 463 Query 117 RKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E +A+ N R F GR V A+ Y ++RF DL Sbjct 464 DAGEMNKAIQALNNRWFAGRKVVAELYDQDRFNSSDL 500 > tgo:TGME49_002770 RNA-binding protein, putative ; K12838 poly(U)-binding-splicing factor PUF60 Length=532 Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 5/91 (5%) Query 62 ILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEA 121 ++LL NMV +VD +LK+E EE +K G++ +V + VRIF E+ A Sbjct 444 VVLLSNMVTPSEVDGELKDEVREECSKFGSIKRVEVHTLKET-----VRIFVEFSDLSGA 498 Query 122 TRALLTFNGRAFGGRTVKAKFYSEERFARGD 152 A+ + +GR FGGR + A Y +E F +G+ Sbjct 499 REAIPSLHGRWFGGRQIIANTYDQELFHQGE 529 > cel:Y47G6A.20 rnp-6; RNP (RRM RNA binding domain) containing family member (rnp-6); K12838 poly(U)-binding-splicing factor PUF60 Length=749 Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRI--FEAAGVPDDCAVRIFCEYER 117 + +++L NMV +D L+ E EE K GN++ V I F ++G+ V+IF +Y Sbjct 657 SNVIVLRNMVTPQDIDEFLEGEIREECGKYGNVIDVVIANFASSGL-----VKIFVKYSD 711 Query 118 KEEATRALLTFNGRAFGGRTVKAKFYSEERFARGD 152 + RA +GR FGG TVKA+ Y + F D Sbjct 712 SMQVDRAKAALDGRFFGGNTVKAEAYDQILFDHAD 746 > tgo:TGME49_121630 hypothetical protein Length=400 Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 3/86 (3%) Query 58 APTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYER 117 AP+ +++L N++ ++D D+K+E +E K G +++VRI A + VR F Y+ Sbjct 306 APSTLIVLKNLMEVAELDDDVKDEIYQECLKHGKVVEVRIHVVASTQE---VRAFALYQL 362 Query 118 KEEATRALLTFNGRAFGGRTVKAKFY 143 E+A RA+ N R+F R VK + Y Sbjct 363 PEQANRAVRVLNERSFAKRKVKCELY 388 > ath:AT1G60830 U2 snRNP auxiliary factor large subunit, putative Length=111 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query 59 PTRILLLLNMVGRGQVD-----SDLKEETEEEAAKLGNLLQVRIF--EAAGVPDDCAVRI 111 PT+I+ L +V + +D+ E+ +E K GNL+ V I P ++ Sbjct 8 PTKIVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDPTPGVGKV 67 Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGD 152 F EY + +++A NGR FGG V A +Y E+++A+GD Sbjct 68 FLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGD 108 > ath:AT1G60900 U2 snRNP auxiliary factor large subunit, putative; K12837 splicing factor U2AF 65 kDa subunit Length=589 Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 11/103 (10%) Query 59 PTRILLLLNMVGRGQVDSD-----LKEETEEEAAKLGNLLQVRIFEAAGVPDDCAV---- 109 PT+I+ L +V + D + E+ +E K GNL+ V I PD Sbjct 486 PTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPN--PDHDPTPGVG 543 Query 110 RIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGD 152 ++F EY + +++A NGR FGG V A +Y E+++A+GD Sbjct 544 KVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGD 586 > cel:F58B3.7 hypothetical protein; K12840 splicing factor 45 Length=371 Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 12/111 (10%) Query 46 LGQVPRAVTFN-------MAPTRILLLLNMVGRGQVD-----SDLKEETEEEAAKLGNLL 93 + + P+A TF T+IL L N+ +V + +E +EE K G ++ Sbjct 252 VAEAPKAPTFATNSMEAVQNATKILQLWNLTDLSEVSGEEGKKEFADEIKEEMEKCGQVV 311 Query 94 QVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYS 144 V + +D VR+F E+ +A +A + NGR FGGR+V A F + Sbjct 312 NVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSVSAGFQN 362 > ath:AT4G36690 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding Length=573 Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query 77 DLKEETEEEAAKLGNLLQVRIFEAA--GVPDDCAVRIFCEYERKEEATRALLTFNGRAFG 134 D+ E+ +E K G L V I + G P ++F +Y + +TRA NGR FG Sbjct 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552 Query 135 GRTVKAKFYSEERFARGD 152 G V A +Y E++F +GD Sbjct 553 GNEVVAVYYPEDKFEQGD 570 > pfa:PF14_0656 U2 snRNP auxiliary factor, putative; K12837 splicing factor U2AF 65 kDa subunit Length=833 Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 19/90 (21%) Query 74 VDSDLKE---ETEEEAAKLGNLLQVRI---------FEAAGVPDDCAVRIFCEYERKEEA 121 VDS +E E +EEA K G L + I E G +IF Y + A Sbjct 746 VDSQYEEILKEVKEEAEKYGTLQNIVIPKPNKDLSYTEGVG-------KIFLHYADEATA 798 Query 122 TRALLTFNGRAFGGRTVKAKFYSEERFARG 151 +A FNGR F R V A FYSEE F +G Sbjct 799 RKAQYMFNGRLFEKRVVCAAFYSEEHFLKG 828 > cpv:cgd7_5220 splicing factor with 3 RRM domains ; K13091 RNA-binding protein 39 Length=563 Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query 73 QVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRA 132 Q+ +++ + EEE K G LL+ + + + ++ +Y R EEA++A + F+GR Sbjct 487 QILEEIQADVEEECGKYGTLLECFLDK-----EKMDGNVWVKYSRPEEASKAKMVFHGRF 541 Query 133 FGGRTVKAKFYSEERFARG 151 F GR + F +E F + Sbjct 542 FAGRKLNVSFIKDEEFPKA 560 > tpv:TP03_0201 hypothetical protein Length=509 Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%) Query 59 PTRILLLLNMVGRGQVDSD-----LKEETEEEAAKLGNLLQVRI--------FEAAGVPD 105 PTR+LLL N+V + +++ D + ++ E G +L+V + E D Sbjct 358 PTRVLLLSNLVSKDELEDDEEYVDIIDDVRCECELYGVVLRVELPRVPKGLTEEEMKAFD 417 Query 106 DCAV-RIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL-RPDP 157 +V F + E A++A +GR FG RTV A F+SE F G P P Sbjct 418 PTSVGSAFVLFSTVESASKARKVLDGRKFGQRTVHAHFFSELYFLTGKFGNPKP 471 > tpv:TP04_0540 hypothetical protein Length=486 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Query 60 TRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKE 119 + ++++ NMV D +L E + E K G + V + +A ++ + +F + E Sbjct 394 SNVIVIYNMVDPKLADENLANEVKVECNKYGTVTSVYLHFSA---NNDTLSVFVVFNTPE 450 Query 120 EATRALLTFNGRAFGGRTVKAKFYSEERFARGD 152 +A A+ N R F GR + K Y + G+ Sbjct 451 DADNAVRALNTRWFNGRQIMCKTYDASAYFSGN 483 > dre:402989 u2af2b, MGC77804, wu:fb73g02, zgc:77804; U2 small nuclear RNA auxiliary factor 2b; K12837 splicing factor U2AF 65 kDa subunit Length=475 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 6/101 (5%) Query 59 PTRILLLLNMVGRGQVDSD-----LKEETEEEAAKLGNLLQVRIFEAA-GVPDDCAVRIF 112 PT +L L+NMV ++ D + E+ +EE +K G + + I G+ +IF Sbjct 374 PTEVLCLMNMVAPEELIDDEEYEEIVEDVKEECSKYGQVKSIEIPRPVDGLDIPGTGKIF 433 Query 113 CEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 E+ ++ +A+ GR F R V K+ + + R D Sbjct 434 VEFTSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 474 > mmu:16589 Uhmk1, 4732477C12Rik, 4930500M09Rik, AA673513, AI449218, AU021979, KIS, Kist; U2AF homology motif (UHM) kinase 1 (EC:2.7.11.1); K08877 U2AF homology motif (UHM) kinase 1 [EC:2.7.11.1] Length=419 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 13/111 (11%) Query 50 PRAVTFNMAPTRILLLLNMVGRGQVDS-----DLKEETEEEAAKLGNLLQVRIFEAAGVP 104 P M PT +L LLN++ +++ D+ E+ +EE K G ++ + VP Sbjct 310 PHIEDLVMLPTPVLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLL------VP 363 Query 105 DDCAVR--IFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 + R +F EY ++ A GR F G+ V A FY + RG L Sbjct 364 KENPGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRGYL 414 > cel:Y92C3B.2 uaf-1; U2AF splicing factor family member (uaf-1); K12837 splicing factor U2AF 65 kDa subunit Length=474 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Query 60 TRILLLLNMVGRGQVDSD-----LKEETEEEAAKLG---NLLQVRIFEAAGVPDDCAVRI 111 T IL L+NMV ++ +D + E+ +E +K G +L R +E VP ++ Sbjct 375 TEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVP--GVGKV 432 Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERF 148 F E+ + RA GR F RTV +Y +++ Sbjct 433 FVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKY 469 > dre:767721 uhmk1, MGC153241, zgc:153241; U2AF homology motif (UHM) kinase 1 (EC:2.7.11.1); K08877 U2AF homology motif (UHM) kinase 1 [EC:2.7.11.1] Length=410 Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%) Query 50 PRAVTFNMAPTRILLLLNMVGRGQVDS-----DLKEETEEEAAKLGNLLQVRIFEAAGVP 104 P + PT +L LLN++ + + D+ E+ +EE K G ++ + I + Sbjct 301 PHIEDLVLLPTPVLRLLNVIDDSHLYNEDEYEDIIEDMKEECQKYGTVVSLLIPKE---- 356 Query 105 DDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 + ++F EY ++ A GR F G+ V A FY + RG L Sbjct 357 NPGKGQVFVEYANAGDSKEAQRLLTGRTFDGKFVVATFYPLGAYKRGYL 405 > tpv:TP04_0035 U2 small nuclear ribonucleoprotein, auxiliary factor, large subunit; K12837 splicing factor U2AF 65 kDa subunit Length=380 Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 16/105 (15%) Query 59 PTRILLLLNMVGRGQVDSDLKEE-----TEEEAAKLGNLLQVRIFEAAGVPD------DC 107 P++++ LLNMV + SD +EEA K G L +V I PD + Sbjct 275 PSKVIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYGPLQEVVIPR----PDKDLTFKEG 330 Query 108 AVRIFCEYERKEEATRALLTFNGRAFG-GRTVKAKFYSEERFARG 151 ++F YE A +A FNGR F R V + F+ E+ F G Sbjct 331 VGKVFIRYEDLLSARKAQYMFNGRVFDKNRIVCSAFFPEDLFITG 375 > bbo:BBOV_II004960 18.m06413; RNA recognition motif (RRM)-containing protein; K12837 splicing factor U2AF 65 kDa subunit Length=383 Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query 59 PTRILLLLNMVGRGQVDSD-----LKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVR--- 110 P+RI+ L+N+V + D +K+ EEA K G+L + I DD + + Sbjct 278 PSRIVQLINIVFHEDLIQDKRYHEVKDAIMEEAKKYGHLEDIVIPRPN---DDLSYKEGV 334 Query 111 --IFCEYERKEEATRALLTFNGRAF-GGRTVKAKFYSEERFARG 151 +F ++ + + RA NGR F G R V A F+ +RF +G Sbjct 335 GKVFLKFGDEISSRRAQYMLNGRVFDGNRIVCAAFFPLDRFLKG 378 > tpv:TP03_0691 splicing factor; K13091 RNA-binding protein 39 Length=644 Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Query 77 DLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGR 136 +++E+ +EE K G ++QV F PD +++ +++ ++A A + GR F G Sbjct 571 EIEEDVKEECGKYGTVIQV--FVNKRNPDG---KVYVKFKNNDDAQAANKSLQGRYFAGN 625 Query 137 TVKAKFYSEERF 148 T++ + S++++ Sbjct 626 TIQVSYISDDQY 637 > bbo:BBOV_IV007070 23.m05938; hypothetical protein Length=400 Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%) Query 59 PTRILLLLNMVGRGQVDSDLK-----EETEEEAAKLGNLLQVRI---------------- 97 PTR+LLL N+V + ++ D + ++ E + G +++V + Sbjct 254 PTRVLLLANLVSKEDLEDDAEYYDIIDDVRCECEEYGPVVRVEMPRVPKGLTLDEIRNMD 313 Query 98 FEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDLRPDP 157 F A G CA +F E A++A +GR FG R V+ F+SE F G+ Sbjct 314 FSAVG----CAFVLFSNIEG---ASKARKVLDGRKFGHRIVECHFFSELLFHVGEFSNPA 366 Query 158 EQEIDQHVTV 167 + +H ++ Sbjct 367 PNFLKEHSSM 376 > tgo:TGME49_108920 U2 small nuclear ribonucleoprotein auxiliary factor U2AF Length=704 Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDLRPDPE 158 + E+E E + +A NGR FGG+ V+A ++SE +F R ++ DP+ Sbjct 539 YVEFEDCEWSAKARKALNGRKFGGKIVEAHYFSEVKF-RKEMFYDPK 584 > cel:C07A4.1 hypothetical protein Length=360 Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query 69 VGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTF 128 + + D+DL++ + G++ +VRIF+ F YE+KE AT+A++ Sbjct 244 ISQQTTDADLRDL----FSTYGDIAEVRIFKTQRY-------AFVRYEKKECATKAIMEM 292 Query 129 NGRAFGGRTVKAKFYSEERFARGDLRPDP 157 NG+ G V+ + + L P P Sbjct 293 NGKEMAGNQVRCSWGRTQAVPNQALNPLP 321 > ath:AT2G16940 RNA recognition motif (RRM)-containing protein Length=561 Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 14/122 (11%) Query 32 SVCGVARQGQDVTTLGQVPRAVTFNMAPTRILLLLNMVG-----RGQVDSDLKEETEEEA 86 +V G+A G G +P P+ LLL NM D D+KE+ +EE Sbjct 439 AVAGLAGSG---IIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 495 Query 87 AKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEE 146 +K G L IF V + ++ +E + A A +GR F G+ + A + + E Sbjct 496 SKFGKLNH--IF----VDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTE 549 Query 147 RF 148 + Sbjct 550 AY 551 > tgo:TGME49_034520 U2 snRNP auxiliary factor or splicing factor, putative ; K12837 splicing factor U2AF 65 kDa subunit Length=553 Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 16/116 (13%) Query 48 QVPRAVTFNMAPTRILLLLNMVGRGQVDSDLKE------ETEEEAAKLGNLLQVRIFEAA 101 QV A P++++ LLN V + + D KE + ++EA K G L +V + + Sbjct 437 QVQAARKIGERPSKVVQLLNCVYQEDL-IDPKEYEAICDDIKQEAEKHGALEEVLVPKPN 495 Query 102 GVPDDCAVR-----IFCEYERKEEATRALLTFNGRAF-GGRTVKAKFYSEERFARG 151 +D + R +F Y A +A L NGR F R V A F+ EE+FA G Sbjct 496 ---EDLSYREGVGKVFLRYSDVTAARKAQLMLNGRRFDSNRVVCAAFFPEEKFAAG 548 > dre:386806 cstf2, CstF-64, fb11e07, wu:fb11e07, zgc:56346, zgc:77730; cleavage stimulation factor, 3' pre-RNA, subunit 2; K14407 cleavage stimulation factor subunit 2 Length=488 Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEER 147 FCEY+ +E A A+ NGR F GR ++ + E+ Sbjct 69 FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 104 > mmu:83410 Cstf2t, 64kDa, C77975, tCstF-64, tauCstF-64; cleavage stimulation factor, 3' pre-RNA subunit 2, tau; K14407 cleavage stimulation factor subunit 2 Length=632 Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Query 80 EETEEEA----AKLGNLLQVRIF--EAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAF 133 E TEE+ +++G+++ R+ G P FCEY+ +E A A+ NGR F Sbjct 26 EATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG---FCEYQDQETALSAMRNLNGREF 82 Query 134 GGRTVKAKFYSEER 147 GR ++ + E+ Sbjct 83 SGRALRVDNAASEK 96 > pfa:PF07_0066 conserved Plasmodium protein, unknown function Length=1125 Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 0/37 (0%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERF 148 F +E E AT+A +GR FG ++A ++SE++F Sbjct 1051 FIHFENIESATKARKELSGRKFGANIIEANYFSEKKF 1087 > hsa:23283 CSTF2T, CstF-64T, DKFZp434C1013, KIAA0689; cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant; K14407 cleavage stimulation factor subunit 2 Length=616 Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Query 80 EETEEEA----AKLGNLLQVRIF--EAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAF 133 E TEE+ +++G+++ R+ G P FCEY+ +E A A+ NGR F Sbjct 26 EATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG---FCEYQDQETALSAMRNLNGREF 82 Query 134 GGRTVKAKFYSEER 147 GR ++ + E+ Sbjct 83 SGRALRVDNAASEK 96 > pfa:MAL13P1.120 splicing factor, putative; K13091 RNA-binding protein 39 Length=864 Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query 76 SDLKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGG 135 +D+ E+ +EE +K G ++ + + + +I+ +Y +E+ ++ NGR FGG Sbjct 790 NDILEDVKEECSKYGKVVNIWL-----DTKNIDGKIYIKYSNNDESLKSFQFLNGRYFGG 844 Query 136 RTVKAKFYSEE 146 + A F S + Sbjct 845 SLINAYFISND 855 > mmu:72459 Htatsf1, 1600023H17Rik, 2600017A12Rik, 2700077B20Rik, TAT-SF1; HIV TAT specific factor 1; K13093 HIV Tat-specific factor 1 Length=757 Score = 36.2 bits (82), Expect = 0.051, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 11/87 (12%) Query 61 RILLLLNMVGRGQVDSD------LKEETEEEAAKLGNLLQVRIFEAAGVPDDCAVRIFCE 114 R+++L NM + D ++E+ E +K G + ++ +F+ PD A F E Sbjct 265 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH--PDGVASVSFRE 322 Query 115 YERKEEATRALLTFNGRAFGGRTVKAK 141 EEA + T +GR FGGR + A+ Sbjct 323 ---PEEADHCIQTLDGRWFGGRQITAQ 346 > xla:379871 cstf2, MGC53575, MGC83019, cstf-64; cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa; K14407 cleavage stimulation factor subunit 2 Length=518 Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEER 147 FCEY+ +E A A+ NGR F GR ++ + E+ Sbjct 61 FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96 > hsa:1478 CSTF2, CstF-64; cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa; K14407 cleavage stimulation factor subunit 2 Length=577 Score = 35.8 bits (81), Expect = 0.063, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEER 147 FCEY+ +E A A+ NGR F GR ++ + E+ Sbjct 61 FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96 > xla:380287 u2af2, MGC53441, u2af65; U2 small nuclear RNA auxiliary factor 2; K12837 splicing factor U2AF 65 kDa subunit Length=456 Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 6/113 (5%) Query 47 GQVPRAVTFNMAPTRILLLLNMVGRGQ-VDSD----LKEETEEEAAKLGNLLQVRIFEAA 101 G + V PT +L L+NMV + +D D + E+ +E K G + + I Sbjct 343 GLMSSQVQMGGHPTEVLCLMNMVVPEELIDDDEYEEIVEDVRDECGKYGAVKSIEIPRPV 402 Query 102 -GVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDL 153 GV +IF E+ + +A+ GR F R V K+ + + R D Sbjct 403 DGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 455 > mmu:108062 Cstf2, 64kDa, C630034J23Rik, Cstf64; cleavage stimulation factor, 3' pre-RNA subunit 2; K14407 cleavage stimulation factor subunit 2 Length=580 Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 112 FCEYERKEEATRALLTFNGRAFGGRTVKAKFYSEER 147 FCEY+ +E A A+ NGR F GR ++ + E+ Sbjct 61 FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96 > tgo:TGME49_083740 mRNA processing protein, putative (EC:3.4.21.72) Length=615 Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Query 79 KEETEEEAAKLGNLLQVRI-FEAAGVPDDCAVRIFCEYERKEEATRALLTFNGRAFGGRT 137 +E+ + +++G +LQVRI ++ G A FCE+ E A +T N GGR Sbjct 29 EEDLKTLLSRVGRVLQVRIKYDEGGQSKGFA---FCEFPDPETCYLAYVTLNNADLGGRK 85 Query 138 VKAKFYSEE 146 +K F ++E Sbjct 86 LKIDFATDE 94 > hsa:27336 HTATSF1, TAT-SF1, dJ196E23.2; HIV-1 Tat specific factor 1; K13093 HIV Tat-specific factor 1 Length=755 Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%) Query 51 RAVTFNMAPTRILLLLNMVGRGQVDSD------LKEETEEEAAKLGNLLQVRIFEAAGVP 104 RA M R++++ NM + D ++E+ E +K G + ++ +F+ P Sbjct 254 RAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH--P 311 Query 105 DDCAVRIFCEYERKEEATRALLTFNGRAFGGRTVKAK 141 D A + EEA + T +GR FGGR + A+ Sbjct 312 DGVAS---VSFRDPEEADYCIQTLDGRWFGGRQITAQ 345 > cpv:cgd2_1480 splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM domain ; K12837 splicing factor U2AF 65 kDa subunit Length=438 Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 34/152 (22%) Query 32 SVCGVARQGQDVTTLGQVPRAVTFNM------------------APTRILLLLNM-VGRG 72 SV Q + + ++P ++T+N+ P++I+ LLN+ + Sbjct 276 SVNSNIIQNSEYLHITEIPTSMTYNIFSNPVLGLMMKYSKQVGETPSQIIQLLNIFLPEE 335 Query 73 QVDSDLKEET----EEEAAKLGNLLQV-----RIFEAAGVPDDC--AVRIFCEYERKEEA 121 VD+++ T EA G +L++ ++ E C A ++F + A Sbjct 336 LVDNEIYNSTLDSVRSEAEVYGTILEIFCPRPKVIEEF---HSCSGAGKVFIYFSDITAA 392 Query 122 TRALLTFNGRAFGG-RTVKAKFYSEERFARGD 152 RA FNGR F +TV A F+ E++ + + Sbjct 393 RRAQYQFNGRVFDNIKTVSATFFPLEKYLKHE 424 Lambda K H 0.326 0.141 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4222647260 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40