bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0713_orf4
Length=296
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_022000 ribosome biogenesis protein Brix, putative ;... 286 5e-77
cpv:cgd4_1520 Brx1p nucleolar protein required for biogenesis ... 202 1e-51
tpv:TP01_0829 hypothetical protein; K14820 ribosome biogenesis... 200 6e-51
dre:402823 bxdc2; brix domain containing 2; K14820 ribosome bi... 184 2e-46
xla:398268 brix1, brix, bxdc2; BRX1, biogenesis of ribosomes, ... 181 4e-45
mmu:67832 Brix1, 1110064N10Rik, Bxdc2, C76935; BRX1, biogenesi... 172 9e-43
hsa:55299 BRIX1, BRIX, BXDC2, FLJ11100; BRX1, biogenesis of ri... 172 1e-42
bbo:BBOV_IV009420 23.m05729; ribosome biogenesis Brix protein;... 159 2e-38
sce:YOL077C BRX1; Brx1p; K14820 ribosome biogenesis protein BRX1 157 4e-38
pfa:PF07_0122 nucleolus BRIX protein, putative; K14820 ribosom... 157 5e-38
ath:AT3G15460 brix domain-containing protein 154 5e-37
ath:AT1G52930 brix domain-containing protein; K14820 ribosome ... 150 6e-36
cel:K12H4.3 hypothetical protein; K14820 ribosome biogenesis p... 140 8e-33
tpv:TP01_0039 U3 small nuclear ribonucleoprotein; K14561 U3 sm... 46.2 1e-04
cpv:cgd2_160 IMP4-like U3 small nucleolar ribonucleoprotein (s... 40.4 0.007
cpv:cgd4_2740 IMP4 U3 small nucleolar ribonucleoprotein ; K145... 40.0 0.010
hsa:84154 RPF2, BXDC1, FLJ21087, bA397G5.4; ribosome productio... 38.9 0.024
tgo:TGME49_110380 U3 small nucleolar ribonucleoprotein protein... 37.7 0.053
bbo:BBOV_I000910 16.m00780; Brix domain containing protein; K1... 37.4 0.063
tpv:TP03_0398 hypothetical protein; K14846 ribosome production... 37.0 0.082
ath:AT4G01560 MEE49; MEE49 (maternal effect embryo arrest 49);... 36.2 0.17
bbo:BBOV_IV002520 21.m02859; RNA processing factor 1; K14846 r... 35.4 0.23
sce:YKR081C RPF2; Essential protein involved in the processing... 34.3 0.64
mmu:620018 Gm6124; predicted gene 6124 33.9
mmu:330513 Gm5114, 4921507A12, EG330513; predicted gene 5114 33.9
mmu:100039269 Gm2128; predicted gene 2128 33.5
hsa:9108 MTMR7, DKFZp781E194, MGC163449, MGC163451; myotubular... 33.1 1.4
hsa:4065 LY75, CD205, CLEC13B, DEC-205, GP200-MR6, LY-75; lymp... 32.3 1.9
ath:AT5G02840 LCL1; LCL1 (LHY/CCA1-like 1); DNA binding / tran... 32.3 2.0
hsa:26133 TRPC4AP, C20orf188, TRRP4AP, TRUSS; transient recept... 31.6 3.7
mmu:56407 Trpc4ap, 4833429F06Rik, D2Ertd113e, FLJ00177, Trrp4a... 31.2 4.3
eco:b0458 ylaC, ECK0452, JW5063; inner membrane protein, DUF14... 30.8 5.7
hsa:138715 ARID3C; AT rich interactive domain 3C (BRIGHT-like) 30.8 6.9
cel:K09H9.6 lpd-6; LiPid Depleted family member (lpd-6); K1485... 30.4 7.8
mmu:550619 Arid3c, OTTMUSG00000006683; AT rich interactive dom... 30.4 8.0
ath:AT4G27370 VIIIB; VIIIB; motor 30.0 9.9
> tgo:TGME49_022000 ribosome biogenesis protein Brix, putative
; K14820 ribosome biogenesis protein BRX1
Length=517
Score = 286 bits (733), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 190/249 (76%), Gaps = 10/249 (4%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDALLHVAKVPLGPTFIARLMNVETLS 102
+++KWE+K+ ++ I+EL QLR+CN+VLY E RK D LLHV+K+P GPT I R++N+ TL+
Sbjct 262 AESKWERKQTMKDISELAQLRACNNVLYFESRKRDLLLHVSKIPHGPTLIFRVLNIHTLA 321
Query 103 ELRLSGNCLLHSRPLLIFGSEFDRD-----PHYRVLKELFVQVFGTPRNHPKSKPFFDHA 157
E++++GNCLLHSRPLL+F EF + PH ++KE+FVQVFGTPRNHPK+KPFFDHA
Sbjct 322 EMKMTGNCLLHSRPLLLFSPEFGSEHGPAQPHLALIKEVFVQVFGTPRNHPKAKPFFDHA 381
Query 158 MSFFVSD-NRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKS 216
++F+ D NRIWFRHYQIAPL+ GEGGDA+ P RQTFIEIGPR VL+ VKILDGSF GK+
Sbjct 382 LAFYKFDGNRIWFRHYQIAPLIGGEGGDADTPERQTFIEIGPRCVLEIVKILDGSFSGKT 441
Query 217 LWRNTEFVRTLDLLRPRRLQAAIAFARRQGQKEKR-KLYEEAVLKDAPKSKIANEDIFGT 275
+W N ++ + DL+ +R+ A ++A+R KEKR + ++ ++++P +A E++FG
Sbjct 442 IWSNRNYICSRDLVALQRMGRAQSYAQRVQAKEKRTERLDKLHIEESP---LAMENVFGD 498
Query 276 GIVPSKQNR 284
+ S+ R
Sbjct 499 FVRDSEDRR 507
> cpv:cgd4_1520 Brx1p nucleolar protein required for biogenesis
of the 60S ribosomal subunit ; K14820 ribosome biogenesis
protein BRX1
Length=353
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 158/246 (64%), Gaps = 25/246 (10%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDAL-LHVAKVPLGPTFIARLMNVETL 101
S+ KWEKK+ I+E+ +LRSCN+++ LE R+++ L + VAK P GP+ +++N+ TL
Sbjct 98 SEVKWEKKQPFSEISEMSELRSCNNIILLEARRHEELYMWVAKCPNGPSIKFQILNIHTL 157
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPH----------------YRVLKELFVQVFGTPR 145
ELRL+GN LL SRPLL F S F+ D + +++K+LF+QVFGTPR
Sbjct 158 GELRLAGNSLLGSRPLLSFDSAFESDNYVHNINFSQEQKHLKLPLKLIKDLFIQVFGTPR 217
Query 146 NHPKSKPFFDHAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPV 205
HPKSKPF DH +SF D +IWFRHYQIAP D NN +Q IEIGPRFVL+P+
Sbjct 218 YHPKSKPFHDHVISFNFLDGKIWFRHYQIAPTT---ERDHNNVDKQVLIEIGPRFVLEPI 274
Query 206 KILDGSFCGKSLWRNTEFVRTLDLLRPRRLQA-AIAFARRQGQKEKRKLYEEAV---LKD 261
ILDG+F G+ L+RN ++ ++ LLR Q + ++ +R K+KR Y++ + L +
Sbjct 275 LILDGTFSGQVLYRNPDY-KSPTLLRNIIKQGYSSSYLQRVQSKQKRSDYKDDLDSSLMN 333
Query 262 APKSKI 267
P+ K+
Sbjct 334 VPEKKM 339
> tpv:TP01_0829 hypothetical protein; K14820 ribosome biogenesis
protein BRX1
Length=294
Score = 200 bits (508), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 125/191 (65%), Gaps = 3/191 (1%)
Query 44 QTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDALLHVAKVPLGPTFIARLMNVETLSE 103
++KW+ K + I ELC L +C LYLE RKN+ +L +AK P GPT +R+ N+ TL +
Sbjct 80 ESKWDSKAGYKEINELCDLNNCTGALYLESRKNEMILWMAKTPNGPTLKSRVTNIHTLKD 139
Query 104 LRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVS 163
+ +GNCL SRPLL F F +P+ +++++L Q+FGTP HPKS PF DH +SFF
Sbjct 140 SKFTGNCLARSRPLLTFDKSFSDEPYLKLVQKLISQIFGTPNQHPKSMPFHDHCLSFFYL 199
Query 164 DNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEF 223
DNRI RHYQI P N+P Q +EIGP+FVL+P+ ILDGSF G +LWRN+++
Sbjct 200 DNRIHLRHYQITP---KNEFSVNSPDNQLLVEIGPQFVLEPILILDGSFSGITLWRNSKY 256
Query 224 VRTLDLLRPRR 234
+ L + R R
Sbjct 257 ISPLMVKRYER 267
> dre:402823 bxdc2; brix domain containing 2; K14820 ribosome
biogenesis protein BRX1
Length=383
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 15/220 (6%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLE-QRKNDALLHVAKVPLGPTFIARLMNVETL 101
+ TK ++K+KL + E+C++++CN ++ E ++K D + ++ VP GP+ + NV TL
Sbjct 126 ADTKMDRKDKLFVVNEVCEIKNCNKCIFFEAKKKQDLYMWISNVPHGPSVKFLVQNVHTL 185
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF 161
+EL+++GNCL SRPLL F FD +P Y +LKELF QVF TP +HPKS+PF DH +SF
Sbjct 186 AELKMTGNCLKGSRPLLSFDPAFDSEPQYALLKELFTQVFSTPLHHPKSQPFVDHVISFS 245
Query 162 VSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNT 221
++D+RIWFR+YQI V E + +EIGPRFVL+P++I GSF G +L+ N
Sbjct 246 IADHRIWFRNYQI----VEEDA--------SLVEIGPRFVLNPIRIFQGSFGGPTLYENP 293
Query 222 EFVRTLDLLRPRRLQAAIAFARRQGQKEKR--KLYEEAVL 259
F R RL AA RQ K+ R K EE VL
Sbjct 294 HFQSPNAHRRMLRLAAAARQKERQMVKQVRMEKRMEECVL 333
> xla:398268 brix1, brix, bxdc2; BRX1, biogenesis of ribosomes,
homolog; K14820 ribosome biogenesis protein BRX1
Length=339
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 134/215 (62%), Gaps = 13/215 (6%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLE-QRKNDALLHVAKVPLGPTFIARLMNVETL 101
++TK ++K+KL + E+C++++CN +Y E ++K D + ++ P GP+ + N+ TL
Sbjct 83 AETKMDRKDKLFVVNEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPEGPSAKFLVQNIHTL 142
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF 161
+EL++SGNCL SRP+L F FDR+P Y +LKEL Q+FGTPR HP+S+PF DH +F
Sbjct 143 AELKMSGNCLKGSRPILSFDPAFDREPQYALLKELLTQIFGTPRYHPRSQPFVDHIFTFS 202
Query 162 VSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNT 221
++DNRIWFR+YQI + E +EIGPRFVL+ +KI GSF G +L+ N
Sbjct 203 IADNRIWFRNYQI----IEEDA--------ALVEIGPRFVLNLIKIFKGSFGGPTLYENP 250
Query 222 EFVRTLDLLRPRRLQAAIAFARRQGQKEKRKLYEE 256
+ R RL A +Q KE +KL +E
Sbjct 251 HYQSPNMHRRMIRLATAAKVKEKQQVKEVQKLKKE 285
> mmu:67832 Brix1, 1110064N10Rik, Bxdc2, C76935; BRX1, biogenesis
of ribosomes, homolog (S. cerevisiae); K14820 ribosome biogenesis
protein BRX1
Length=353
Score = 172 bits (437), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 141/241 (58%), Gaps = 18/241 (7%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLE-QRKNDALLHVAKVPLGPTFIARLMNVETL 101
+ TK ++K+KL I E+C++++CN +Y E ++K D + ++ P GP+ + N+ TL
Sbjct 90 ADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTL 149
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF 161
+EL+++GNCL SRPLL F FD PHY +LKE +Q+F TPR HPKS+PF DH +F
Sbjct 150 AELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFT 209
Query 162 VSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNT 221
+ DNRIWFR++QI + E +EIGPRFVL+ +KI GSF G +L+ N
Sbjct 210 ILDNRIWFRNFQI----IEEDA--------ALVEIGPRFVLNLIKIFQGSFGGPTLYENP 257
Query 222 EFVRTLDLLRPRRLQAAIAFARRQGQKEKRKLYEEAVLKDAPKSKIANEDIFGTGIVPSK 281
+ R R A + RQ K+ +KL K PK+ + ++ ++P++
Sbjct 258 HYQSPNMHRRVIRSITAAKYRERQQVKDVQKLR-----KKEPKTILPHDPTADVFVIPAE 312
Query 282 Q 282
+
Sbjct 313 E 313
> hsa:55299 BRIX1, BRIX, BXDC2, FLJ11100; BRX1, biogenesis of
ribosomes, homolog (S. cerevisiae); K14820 ribosome biogenesis
protein BRX1
Length=353
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 141/241 (58%), Gaps = 18/241 (7%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLE-QRKNDALLHVAKVPLGPTFIARLMNVETL 101
+ TK ++K+KL I E+C++++CN +Y E ++K D + ++ P GP+ + N+ TL
Sbjct 90 ADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTL 149
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF 161
+EL+++GNCL SRPLL F FD PHY +LKEL +Q+F TPR HPKS+PF DH +F
Sbjct 150 AELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFT 209
Query 162 VSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNT 221
+ DNRIWFR++QI + E +EIGPRFVL+ +KI GSF G +L+ N
Sbjct 210 ILDNRIWFRNFQI----IEEDA--------ALVEIGPRFVLNLIKIFQGSFGGPTLYENP 257
Query 222 EFVRTLDLLRPRRLQAAIAFARRQGQKEKRKLYEEAVLKDAPKSKIANEDIFGTGIVPSK 281
+ R R A + +Q K+ +KL K PK+ + ++ + P++
Sbjct 258 HYQSPNMHRRVIRSITAAKYREKQQVKDVQKLR-----KKEPKTLLPHDPTADVFVTPAE 312
Query 282 Q 282
+
Sbjct 313 E 313
> bbo:BBOV_IV009420 23.m05729; ribosome biogenesis Brix protein;
K14820 ribosome biogenesis protein BRX1
Length=281
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 105/154 (68%), Gaps = 3/154 (1%)
Query 44 QTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDALLHVAKVPLGPTFIARLMNVETLSE 103
++K EK++ +++ L +L CNSV+++E RK + ++ +A P GP+F AR+ NV TL +
Sbjct 125 ESKLEKRDSRKALNTLAELSRCNSVIFIENRKCEVIMWIALTPYGPSFKARITNVHTLKD 184
Query 104 LRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVS 163
GN LL+SRPLL F + FD PH +++K L QVFGTP NHPKSKPF DH +SFF
Sbjct 185 STYFGNALLYSRPLLTFDAGFDTAPHLQLIKSLISQVFGTPNNHPKSKPFHDHCLSFFYF 244
Query 164 DNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIG 197
D RI+FRH+QI+P + E G N P +Q+ EIG
Sbjct 245 DGRIFFRHFQISP--INEYG-INKPEQQSLTEIG 275
> sce:YOL077C BRX1; Brx1p; K14820 ribosome biogenesis protein
BRX1
Length=291
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Query 33 HFVWALGFVLSQT----KWEKKEKLQSIAELCQLRSCNSVLYLEQRKN-DALLHVAKVPL 87
H + L +L + K + K+ LQ + E+ +L +CN+VL+ E RK+ D L ++K P
Sbjct 47 HLIQDLSGLLPHSRKEPKLDTKKDLQQLNEIAELYNCNNVLFFEARKHQDLYLWLSKPPN 106
Query 88 GPTFIARLMNVETLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNH 147
GPT + N+ T+ EL +GNCL SRP+L F F+ PHY+++KEL V F P N
Sbjct 107 GPTIKFYIQNLHTMDELNFTGNCLKGSRPVLSFDQRFESSPHYQLIKELLVHNFCVPPNA 166
Query 148 PKSKPFFDHAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKI 207
KSKPF DH MSF + D++IW R Y+I+ + + + +EIGPRFV+ + I
Sbjct 167 RKSKPFIDHVMSFSIVDDKIWVRTYEISHSTKNKEEYEDGEEDISLVEIGPRFVMTVILI 226
Query 208 LDGSFCGKSLWRNTEFVRTLDLLRPRRLQAAI--AFARRQGQKEKRKLYEEAVLKDAPKS 265
L+GSF G ++ N ++V + +++R + Q A A +R + E++ E VL P
Sbjct 227 LEGSFGGPKIYENKQYV-SPNVVRAQIKQQAAEEAKSRAEAAVERKIKRRENVLAADP-- 283
Query 266 KIANEDIF 273
++N+ +F
Sbjct 284 -LSNDALF 290
> pfa:PF07_0122 nucleolus BRIX protein, putative; K14820 ribosome
biogenesis protein BRX1
Length=416
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
Query 44 QTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDALLHVAKVPLGPTFIARLMNVETLSE 103
+ KW+KK + ++ R+CN++++ + ++ L + K GP+ +++ L
Sbjct 195 ENKWDKKVPKSELNDISYSRNCNNIIFFDVKRKRYCLWICKSITGPSLYFEILDYIPLHS 254
Query 104 LRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVS 163
L SGNCLL+SRPLLIF FD H +++KE+F+ VFG P HP SKPF+DH +FF
Sbjct 255 LLFSGNCLLYSRPLLIFSKHFDELDHLKLIKEMFIHVFGVPNYHPLSKPFYDHCYNFFYV 314
Query 164 DNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEF 223
++ I+FRHYQI P+ + D+NN ++Q +EIGP+F L +KI + F G+ L+ N ++
Sbjct 315 NDLIYFRHYQILPVTL---ADSNNVNKQQLVEIGPQFTLHIIKIFEECFKGRILYENEKY 371
> ath:AT3G15460 brix domain-containing protein
Length=315
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query 49 KKEKLQSIAELCQLRSCNSVLYLEQRKN-DALLHVAKVPLGPTFIARLMNVETLSELRLS 107
K + ++ EL +L+ +S L+ E RK+ D + + K P GP+ + V T+ EL+L+
Sbjct 90 KSSRGATLNELIELKGSSSCLFFECRKHKDLYMWMVKSPGGPSVKFLVNAVHTMEELKLT 149
Query 108 GNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRI 167
GN L SRPLL F S F+ D H+++LKE+ Q+FG P H KSKP+ DH F + D+ I
Sbjct 150 GNHLKGSRPLLTFSSNFENDAHWKLLKEMLTQIFGIPEGHRKSKPYHDHVFVFSIVDDHI 209
Query 168 WFRHYQIA-PLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEFVRT 226
WFR+YQI+ P + + + T IE+GPRF L+P+KI GSF G +L+ N +V
Sbjct 210 WFRNYQISVPHNESDKIARGDLDKMTLIEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSP 269
Query 227 LDLLRPRRLQAAIAFARRQGQKEKRKLYE 255
+ + A FA++ K +RK++E
Sbjct 270 NQIRALEKRNKAGKFAKKIKAKTRRKMHE 298
> ath:AT1G52930 brix domain-containing protein; K14820 ribosome
biogenesis protein BRX1
Length=320
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Query 49 KKEKLQSIAELCQLRSCNSVLYLEQRKN-DALLHVAKVPLGPTFIARLMNVETLSELRLS 107
K K ++ EL +L++ NS L+ E RK+ D + + K P GP+ + V + E++L+
Sbjct 94 KSSKGATLNELIELKNSNSCLFFECRKHKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLT 153
Query 108 GNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRI 167
GN L SRPLL F S FD+D H+++LKE+ QVFG P+ H KSKP+ DH F + D I
Sbjct 154 GNHLKGSRPLLTFSSNFDKDAHWKLLKEMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHI 213
Query 168 WFRHYQIA-PLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEFV 224
WFR+YQI+ P + + T IE+GPRF L+P+KI GSF G +L+ N +V
Sbjct 214 WFRNYQISVPHNESDKIAKGGLDKMTLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYV 271
> cel:K12H4.3 hypothetical protein; K14820 ribosome biogenesis
protein BRX1
Length=352
Score = 140 bits (352), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 109/182 (59%), Gaps = 14/182 (7%)
Query 45 TKWEKKEKLQSIAELCQLRSCNSVLYLEQRK-NDALLHVAKVPLGPTFIARLMNVETLSE 103
+K ++++ L + E+ ++++C V+Y E RK D L ++ V GP+ + NV T+ E
Sbjct 95 SKLDQQKSLNVLNEIAEMKNCTKVMYFESRKRKDTYLWMSNVEKGPSIKFLVHNVHTMKE 154
Query 104 LRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVS 163
L++SGNCL SRP+L F FD+ P +++K + +Q GTP +HP+S+PF DH +F V
Sbjct 155 LKMSGNCLRASRPVLSFDDAFDKKPQLKLIKAVLMQTLGTPHHHPRSQPFVDHVFNFSVG 214
Query 164 D-NRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTE 222
+ ++IWFR++QI + E+GPRFVL+ V++ GSF G L+ N
Sbjct 215 EGDKIWFRNFQIVDESL------------QLQEVGPRFVLEMVRLFAGSFEGAVLYDNPN 262
Query 223 FV 224
+V
Sbjct 263 YV 264
> tpv:TP01_0039 U3 small nuclear ribonucleoprotein; K14561 U3
small nucleolar ribonucleoprotein protein IMP4
Length=302
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query 53 LQSIAELCQLRSCNS-VLYLEQRKNDALLHVAKVPLGPTFIARLMNVETLSELRLSGNCL 111
L+ + E C+ + + VL E R N + + +P GPT +L +V +L +
Sbjct 131 LKDLVEFCRSKDVSDMVLIYETRGNPNSMIITHLPHGPTAYFQLSDVVLRHDLTEKLPTM 190
Query 112 LHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRH 171
+ P L+F + P +K++ +F P + MSF ++I FRH
Sbjct 191 SQAYPHLMFHNF--TSPLGERIKDIIRYMFPPPNTNET------RIMSFINEKDKIIFRH 242
Query 172 YQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEFVRTLDLLR 231
+ V E + EIGPRFVL P KI G+ + L TE+V LR
Sbjct 243 H-----VWTEKKIGAEDKKVALKEIGPRFVLKPFKIELGTVDMRDL--ETEWV-----LR 290
Query 232 P 232
P
Sbjct 291 P 291
> cpv:cgd2_160 IMP4-like U3 small nucleolar ribonucleoprotein
(snoRNP) ; K14846 ribosome production factor 1
Length=359
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query 80 LHVAKVPLGPTFIARLMNVETLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQ 139
L++ +P+GPT R+ +V+ +++ S H+ P +I + FD YR+ ++L
Sbjct 204 LYICHLPIGPTSYFRIRSVKLAQDMKGSAFSTTHN-PEVILNN-FDTRIGYRIGRQL-AS 260
Query 140 VFGTPRNHPKSKPFFD--HAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQT----- 192
+F P N P F ++F + I+FRHY+ N +Q
Sbjct 261 LF--PFN-----PDFAGRRVIAFHNQRDFIFFRHYRYIFRKKRTTSTQNAEEQQDQAINS 313
Query 193 --FIEIGPRFVLDPVKILDGSFCGKS-----LWR 219
EIGPRF L + I +G+F K LWR
Sbjct 314 AGLQEIGPRFTLKLMWIQEGTFNTKKGIYEYLWR 347
> cpv:cgd4_2740 IMP4 U3 small nucleolar ribonucleoprotein ; K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Length=288
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query 53 LQSIAELCQLRSCNSVLYL-EQRKNDALLHVAKVPLGPTFIARLMNVETLSELRLSGNCL 111
L +LC+ ++ + E R L ++ P GPT + +V +L + + +
Sbjct 120 LNDFGDLCRSNGATDLVVVHEHRGEPDGLIISHFPYGPTAYFAISDVVLRHDLPIKPSTM 179
Query 112 LHSRPLLIFGSEFDRDPHYRV---LKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIW 168
S P LIF F+ RV LK LF PK K +SF ++ I
Sbjct 180 SQSIPHLIF-QNFNSTLGLRVSNILKHLF----------PKLKNASQRVISFVNINDNII 228
Query 169 FRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSL 217
FRH+ + + + EIGPRF+L KI G+ K+L
Sbjct 229 FRHFSWDKDITDKSEEIQ------LNEIGPRFILKLYKIELGTLEMKNL 271
> hsa:84154 RPF2, BXDC1, FLJ21087, bA397G5.4; ribosome production
factor 2 homolog (S. cerevisiae); K14847 ribosome production
factor 2
Length=306
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query 97 NVETLSELRLSGNCLLHSRPLLIF-GSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFD 155
N +L +++ + C ++P+LIF G +FD YR LK L + F P +
Sbjct 123 NFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAGLE 181
Query 156 HAMSFFVSDNRIWFRHYQI 174
+ + F + +I+FR Y++
Sbjct 182 YVLHFTALNGKIYFRSYKL 200
> tgo:TGME49_110380 U3 small nucleolar ribonucleoprotein protein,
putative (EC:3.1.2.15); K14561 U3 small nucleolar ribonucleoprotein
protein IMP4
Length=314
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 29/178 (16%)
Query 53 LQSIAELCQLRSCNSVLYLEQRKN--DALLHVAKVPLGPTFIARLMNVETLSELRLSGNC 110
+ + ELC+ + ++ + + + DA++ V +P GP L V +L
Sbjct 122 VNDLVELCRSNNVTDLIIIHEHRGQPDAMV-VCHLPHGPAAYFNLSGVALRHDLPEKPAN 180
Query 111 LLHSRPLLIFGSEFDRDPHYRVLKEL-FVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWF 169
+ + P L+F + F RV+ L F+ +P + P +F + I F
Sbjct 181 MSEAAPHLVFHN-FTSRVGLRVMNVLKFL--------YPPANPIAQRVQAFVNVGDEIHF 231
Query 170 RHYQIAPLVVGEGGDANNPHRQT----------------FIEIGPRFVLDPVKILDGS 211
RHY G +N P + +E+GPRF L P +I G+
Sbjct 232 RHYTWTDNRKKTSGASNTPGSSSADAEEEESSEKKGHLELVEVGPRFTLKPYRIDLGT 289
> bbo:BBOV_I000910 16.m00780; Brix domain containing protein;
K14561 U3 small nucleolar ribonucleoprotein protein IMP4
Length=293
Score = 37.4 bits (85), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query 53 LQSIAELCQLRSCNSVLYL-EQRKNDALLHVAKVPLGPTFIARLMNVETLSELRLSGNCL 111
L+ + C+ + + ++ L E R + + +P GPT +L V +L +
Sbjct 121 LKDLVTFCKSKDVSDIVLLYEHRGEPNAMIICHLPHGPTAYFQLSQVVLRHDLPEKPPTM 180
Query 112 LHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRH 171
+ P LIF + F RV K + +F P N +++ +SF + I FRH
Sbjct 181 SEAYPHLIFHN-FSSQLGERV-KNIIRYMFP-PANEDETR-----VLSFVNKRDYIHFRH 232
Query 172 YQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGS 211
+ + D ++ Q E+GPRF++ P KI G+
Sbjct 233 H----VWTSNNRDGDDKEVQ-LTEVGPRFIMRPFKIELGT 267
> tpv:TP03_0398 hypothetical protein; K14846 ribosome production
factor 1
Length=321
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query 34 FVWALGFVLSQTKWEKKE--KLQSIAELCQLRSCNSVLYLEQRKNDAL---LHVAKVPLG 88
++ L VLS + + +E KL+ + + S+L + + D L L++ +P G
Sbjct 132 YMKELLLVLSNSYYFAREEYKLKEVVKHATENGFTSILLVTE-GADKLPNGLYICSLPRG 190
Query 89 PTFIARLMNVETLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHP 148
PT +L +++ SE++ +G L+ ++P ++ S F+ R+ +++ +F
Sbjct 191 PTTFFKLTSLKLASEMKGAG-VLVATKPEIVLNS-FNTRLGRRIGRQI-ASLFPL----- 242
Query 149 KSKPFFD--HAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVK 206
P F+ ++F + I+FRH++ N + + EIGPRF L
Sbjct 243 --DPEFEGRRVITFHNQRDMIFFRHHRYV---------FRNEKKCSLKEIGPRFTLKTHF 291
Query 207 ILDGSF 212
+ DG F
Sbjct 292 VQDGLF 297
> ath:AT4G01560 MEE49; MEE49 (maternal effect embryo arrest 49);
K14846 ribosome production factor 1
Length=343
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 43/205 (20%)
Query 31 APHFVWALGFVLSQTKWEKKE--KLQSIAELCQLRSCNS--VLYLEQRKNDALLHVAKVP 86
P + L V+ + ++K+ L+ I E + S V++ +R+ DALL + +P
Sbjct 141 GPALISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIG-LP 199
Query 87 LGPTFIARLMNVETLSELRLSGNCLLHSRPLLI--------------FGSEFDRDPHYRV 132
GPT +L N+ +++ GN H L++ F S F DP++R
Sbjct 200 NGPTAHFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRG 259
Query 133 LKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPH--R 190
+ ++F + I+FRH++ D +
Sbjct 260 RR----------------------VVTFHNQRDFIFFRHHRYIFETKESKSDKGKEETIK 297
Query 191 QTFIEIGPRFVLDPVKILDGSFCGK 215
E GPRF L V + G+F K
Sbjct 298 PRLQECGPRFTLKLVTLQHGTFDTK 322
> bbo:BBOV_IV002520 21.m02859; RNA processing factor 1; K14846
ribosome production factor 1
Length=301
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query 80 LHVAKVPLGPTFIARLMNVETLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQ 139
L++ +P GPT RL ++ S+++ +G+ S+ +I + FD RV +++
Sbjct 162 LYICSLPYGPTTFFRLTSLLMASDMKGAGS-FTESKCEIIL-NHFDTRLGRRVGRQIASL 219
Query 140 VFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPR 199
P + ++F + I+FRH++ N + + EIGPR
Sbjct 220 FPLDPELEAR------RVITFHNQRDMIFFRHHRYV---------FRNMKKCSLKEIGPR 264
Query 200 FVLDPVKILDGSFC 213
F L + +G+FC
Sbjct 265 FTLKVHSVQEGTFC 278
> sce:YKR081C RPF2; Essential protein involved in the processing
of pre-rRNA and the assembly of the 60S ribosomal subunit;
interacts with ribosomal protein L11; localizes predominantly
to the nucleolus; constituent of 66S pre-ribosomal particles;
K14847 ribosome production factor 2
Length=344
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query 115 RPLLIF-GSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFFVSDN-------- 165
+P+ F G+ FD P Y+ +K LF+ F + H +S + +
Sbjct 138 KPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQHVISMTIQGDFQDGEPLP 197
Query 166 RIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRF 200
+ FR Y++ +GG R +EIGPR
Sbjct 198 NVLFRVYKLKSYKSDQGG--KRLPRIELVEIGPRL 230
> mmu:620018 Gm6124; predicted gene 6124
Length=860
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query 100 TLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMS 159
TLS L ++ C P +I P Y L FVQ+ TP P + + A S
Sbjct 125 TLSSLAVTNQCDKILDPNVIV-------PFYPTLPASFVQI--TPPQMPSQE--YSLAPS 173
Query 160 FFVSDNRIWFRHYQIAPLVVGEGGDANNPH 189
+ ++ H + PL+ GE G PH
Sbjct 174 YQEGSQVYYYEHNILGPLIAGEFGQCLQPH 203
> mmu:330513 Gm5114, 4921507A12, EG330513; predicted gene 5114
Length=858
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query 100 TLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMS 159
TLS L ++ C P +I P Y L FVQV TP + + A S
Sbjct 125 TLSSLAVTNQCDKILDPNVIV-------PFYPTLPASFVQV--TPPQMLSQE--YSLAPS 173
Query 160 FFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKIL 208
+ ++ H + PL+ GE G PH VL P K++
Sbjct 174 YQEGSQVYYYEHNNLGPLITGEFGQCLQPHGSVSYPGSQTSVLQPEKVM 222
> mmu:100039269 Gm2128; predicted gene 2128
Length=858
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 48/140 (34%), Gaps = 28/140 (20%)
Query 100 TLSELRLSGNCLLHSRPLLIFGSEFDRDPHYRVLKELFVQVFGTPRNHPKSKPFFDHAMS 159
TLS L ++ C P I P + L FVQV TP P + A S
Sbjct 125 TLSSLAVTNQCDKILDPNAIV-------PFHPTLSASFVQV--TPSQMPNQG--YSLAPS 173
Query 160 FFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWR 219
+ ++ H + PL+ GE G PH VL P
Sbjct 174 YQEGSQVYYYEHNNLGPLIAGEFGQCLQPHGSVSYPGSQTAVLQP--------------- 218
Query 220 NTEFVRTLDLLRPRRLQAAI 239
E V L ++PR +Q +
Sbjct 219 --EMVMVLKEIQPRNIQIPL 236
> hsa:9108 MTMR7, DKFZp781E194, MGC163449, MGC163451; myotubularin
related protein 7 (EC:3.1.3.-); K01112 [EC:3.1.3.-]
Length=660
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query 50 KEKLQSIAELCQLRSCNSVLYLEQRKNDALL-HVAKVPLGPTFIARLMNVETLSELRLSG 108
+ LQ + E+C+L+S + +L +N L H+ + FIA+ ++ E S L
Sbjct 280 RNSLQKMLEVCELKSPSMSDFLWGLENSGWLRHIKAIMDAGIFIAKAVSEEGASVLVHCS 339
Query 109 NCLLHSRPLLIFGSEFDRDPHYRVLKELFVQV------FGTPRNH 147
+ + + S DPHYR LK V + FG NH
Sbjct 340 DGWDRTAQVCSVASLL-LDPHYRTLKGFMVLIEKDWISFGHKFNH 383
> hsa:4065 LY75, CD205, CLEC13B, DEC-205, GP200-MR6, LY-75; lymphocyte
antigen 75; K06559 lymphocyte antigen 75
Length=1722
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query 34 FVWALGFVLSQTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDALLHVAKVPLGPTFIA 93
+ W G ++ KWE K K + L + N + ++ V KVPLGP + A
Sbjct 1611 WSWLDGSEVTFVKWENKSK-SGVGRCSMLIASNETWKKVECEHGFGRVVCKVPLGPDYTA 1669
Query 94 RLMNVETLSELRLSG 108
+ V TLS L L G
Sbjct 1670 IAIIVATLSILVLMG 1684
> ath:AT5G02840 LCL1; LCL1 (LHY/CCA1-like 1); DNA binding / transcription
factor
Length=283
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 0/71 (0%)
Query 12 EKKTRSNYSKGSRGKRWLAAPHFVWALGFVLSQTKWEKKEKLQSIAELCQLRSCNSVLYL 71
EKK R Y+ + W H + L W+K E + Q+RS +L
Sbjct 35 EKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL 94
Query 72 EQRKNDALLHV 82
+ +KN L HV
Sbjct 95 KVQKNGTLAHV 105
> hsa:26133 TRPC4AP, C20orf188, TRRP4AP, TRUSS; transient receptor
potential cation channel, subfamily C, member 4 associated
protein; K11796 Trpc4-associated protein
Length=797
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query 79 LLHVAKVPLGPTFIARLMN---VETLSELRLSGNCLLHSRPLLIFGSEFDRDPHY-RVLK 134
L ++++VP +F+ RL+N V+TL++ +S CL S +L+ +R P Y R+L+
Sbjct 656 LAYISQVPTQMSFLFRLINIIHVQTLTQENVS--CLNTSLVILMLARRKERLPLYLRLLQ 713
Query 135 ELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRHY 172
+ H K P F ++ F + R W +HY
Sbjct 714 RM---------EHSKKYPGF--LLNNFHNLLRFWQQHY 740
> mmu:56407 Trpc4ap, 4833429F06Rik, D2Ertd113e, FLJ00177, Trrp4ap,
mFLJ00177, truss; transient receptor potential cation channel,
subfamily C, member 4 associated protein; K11796 Trpc4-associated
protein
Length=797
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query 79 LLHVAKVPLGPTFIARLMN---VETLSELRLSGNCLLHSRPLLIFGSEFDRDPHY-RVLK 134
L ++++VP +F+ RL+N V+TL++ +S CL S +L+ +R P Y R+L+
Sbjct 656 LAYISQVPTQMSFLFRLINIIHVQTLTQENVS--CLNTSLVILMLARRKERLPLYLRLLQ 713
Query 135 ELFVQVFGTPRNHPKSKPFFDHAMSFFVSDNRIWFRHY 172
+ H K P F ++ F + R W +HY
Sbjct 714 RM---------EHSKKYPGF--LLNNFHNLLRFWQQHY 740
> eco:b0458 ylaC, ECK0452, JW5063; inner membrane protein, DUF1449
family
Length=156
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query 193 FIEIGPRFVLDPVKILDGSFCGKSLWRNTEFVRTLDLLRPRRLQAAIAFARRQGQKEKRK 252
F ++ PR+ + + +LD C W NT FV P L AI + R K +
Sbjct 78 FFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFV-------PAALVEAILNSPRVADVHKEQ 130
Query 253 LYEEAVLKDAPKSKIANEDIF 273
L + V K +++ DIF
Sbjct 131 LQKMIV----RKGELSFYDIF 147
> hsa:138715 ARID3C; AT rich interactive domain 3C (BRIGHT-like)
Length=412
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query 128 PHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF----VSDNRIWFRHYQIAPL------ 177
PH +E F Q++ PK K F D SF NR+ Q+ L
Sbjct 95 PHEWTYEEQFKQLYEL-DADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRL 153
Query 178 VVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEF---VRTLDLLRPRR 234
V +GG +R+ + E+ R + P I +F ++ + + T L P
Sbjct 154 VTAKGGLVEVINRKVWREVT-RGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGE 212
Query 235 LQAAIAFARRQGQKE 249
LQAAI RR+G+++
Sbjct 213 LQAAIDSNRREGRRQ 227
> cel:K09H9.6 lpd-6; LiPid Depleted family member (lpd-6); K14859
ribosome biogenesis protein SSF1/2
Length=573
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query 195 EIGPRFVLDPVKILDGSFCGKSLW--RNTEFVRTLDLLRPRRLQAAIAFARRQGQKEKRK 252
EIGPR L+ VKI +G G+ L+ N + L LR + RR+ + E+R
Sbjct 307 EIGPRLTLELVKIEEGIDEGEVLYHKHNAKTPDELIKLRAHMDKKKQMKKRREQESEQRV 366
Query 253 LYEEAVLK---DAPKSKI-------ANEDIFGTGIVPSKQNRKSRASE 290
+ ++K DA ++++ A + TG V +N+K + E
Sbjct 367 IRRLTIVKEQQDAEEAEVKAIRENAARKQAAATGQVEEVENQKEKDRE 414
> mmu:550619 Arid3c, OTTMUSG00000006683; AT rich interactive domain
3C (BRIGHT-like)
Length=409
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query 128 PHYRVLKELFVQVFGTPRNHPKSKPFFDHAMSFF----VSDNRIWFRHYQIAPL------ 177
PH +E F Q++ PK K F D SF NR+ Q+ L
Sbjct 92 PHEWTYEEQFKQLYEL-DADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRL 150
Query 178 VVGEGGDANNPHRQTFIEIGPRFVLDPVKILDGSFCGKSLWRNTEF---VRTLDLLRPRR 234
V +GG +R+ + E+ R + P I +F ++ + + T L P
Sbjct 151 VTAKGGLVEVINRKVWREVT-RGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGE 209
Query 235 LQAAIAFARRQGQKE 249
LQAAI RR+G+++
Sbjct 210 LQAAIDSNRREGRRQ 224
> ath:AT4G27370 VIIIB; VIIIB; motor
Length=1126
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query 201 VLDPVKILDGSFCGKSLWRNTEFVRTLDLLR---PRRLQAAIAFARRQGQKEKRKLYEEA 257
+L+ +++LD S SL + F + L+R P + + AI+ + +KE + E
Sbjct 9 ILESLRLLDSSERSSSLPSPSTFRAPMPLIRQSLPAKFRNAISLESKTIEKEDKDWSTEQ 68
Query 258 VLKDAPKSKIANEDIFGTGIVPSKQNRKSRASEAQDP 294
+ + A K K NE +V + SRA + DP
Sbjct 69 ITQSAEKEKTGNE------VVKISTAQMSRAKNSHDP 99
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 11711201824
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40