bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0904_orf1 Length=137 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_095040 importin subunit beta-1, putative ; K14293 i... 133 2e-31 bbo:BBOV_IV000520 21.m02834; importin beta subunit; K14293 imp... 77.8 1e-14 tpv:TP01_0072 importin beta; K14293 importin subunit beta-1 68.2 8e-12 cpv:cgd7_3030 importin/karyopherin ; K14293 importin subunit b... 50.8 1e-06 pfa:PF08_0069 importin beta, putative; K14293 importin subunit... 43.9 2e-04 dre:570700 kpnb1, MGC123184, wu:fc12b10, zgc:123184; karyopher... 33.9 0.17 mmu:320253 March3, 6330411I15Rik, A530081L18Rik, AI843639, MAR... 33.5 0.21 hsa:115123 MARCH3, FLJ20096, MARCH-III, MGC48332, RNF173; memb... 33.5 0.21 mmu:16211 Kpnb1, AA409963, IPOB, Impnb, MGC8315; karyopherin (... 30.0 2.2 hsa:3837 KPNB1, IMB1, IPO1, IPOB, Impnb, MGC2155, MGC2156, MGC... 30.0 2.2 ath:AT3G08947 binding / protein transporter; K14293 importin s... 29.6 2.9 mmu:329366 4932418E24Rik; RIKEN cDNA 4932418E24 gene 29.3 3.4 xla:379969 gtf2h1, MGC53309; general transcription factor IIH,... 29.3 3.7 cel:R05G6.10 hypothetical protein 28.5 6.1 mmu:69349 1700008O03Rik; RIKEN cDNA 1700008O03 gene 28.5 6.6 > tgo:TGME49_095040 importin subunit beta-1, putative ; K14293 importin subunit beta-1 Length=971 Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 2/139 (1%) Query 1 TPYDAGPPNWQLNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKA 60 T YD GP NWQ+NEEW+WY+H+LR L+A S VY+ KE +QE L+ VN ML VVKA Sbjct 833 TTYDVGPSNWQVNEEWLWYIHDLREGVLQAYMSIVYSFKEKCMQEQLKLYVNAMLDVVKA 892 Query 61 VAEAPTWVHGSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLAT--EEG 118 VA + G + V+QA+EL GDL+ST+G L HL A F+ QL + A+ L T + G Sbjct 893 VAATSPKMRGVDENVKQAIELVGDLISTYGGDLTLHLQRAPFMEQLLQLAQVLGTVKDAG 952 Query 119 NAAVGAKAQWLAQLLNHYS 137 A KAQWL QL+ YS Sbjct 953 GEACLQKAQWLRQLMARYS 971 > bbo:BBOV_IV000520 21.m02834; importin beta subunit; K14293 importin subunit beta-1 Length=859 Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 6/136 (4%) Query 1 TPYDAGPPNWQLNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKA 60 T +D GP + NEEWIWY+++LR TL + +Y K+ + LR V+ +L ++ Sbjct 726 TSFDLGPVD---NEEWIWYINDLREGTLLSFTGILYGQKDINQVDSLRGYVSSILYFIQQ 782 Query 61 VAEAPTWVHGSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLATEEGNA 120 V E P + SA + A+ LTGDL++ FG L HL + V ++ + L EE Sbjct 783 VVETPA-EYFSAGNFRLAVALTGDLITAFGGDLSVHLVNSPLVEKIYERQKALEAEEHPM 841 Query 121 A--VGAKAQWLAQLLN 134 A K WL +LLN Sbjct 842 ASECREKVNWLYKLLN 857 > tpv:TP01_0072 importin beta; K14293 importin subunit beta-1 Length=873 Score = 68.2 bits (165), Expect = 8e-12, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 6/135 (4%) Query 1 TPYDAGPPNWQLNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKA 60 T Y+ GP + NE+WI++V++L+ ++L+ VY LKE +LR V+ +LQ + Sbjct 740 TTYEMGPID---NEDWIYFVNQLQESSLQCFTGIVYGLKEGGALHLLRPYVSSLLQFAQQ 796 Query 61 VAEAPTWVHGSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAER--LATEEG 118 V E P + + + A+ L GDL S+FG L HL ++ + ++ ++ LA + G Sbjct 797 VVETPDPFFDT-NLYKLAVSLIGDLSSSFGSDLSRHLVDSNLIRGIESRLKQLELAQDPG 855 Query 119 NAAVGAKAQWLAQLL 133 + WL L Sbjct 856 IKDCRDRVGWLHSTL 870 > cpv:cgd7_3030 importin/karyopherin ; K14293 importin subunit beta-1 Length=882 Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query 1 TPYDAGPPNWQLNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKA 60 T Y+ GP N +E+WI Y+ ELR A L+ VY +K+A+ E+L V ++Q + Sbjct 752 TQYNDGPVN---SEDWIEYLGELREAVLQGYTGIVYGMKDAKRLEILGPYVPSIIQFIDN 808 Query 61 VAEAPTWVHGSAQMVQQALELTGDLLSTFGRTLGGHL 97 + + + ++ A L GDL++ F L +L Sbjct 809 IVNDYSGEFPNDSNLKNATALVGDLITAFNGQLIQYL 845 > pfa:PF08_0069 importin beta, putative; K14293 importin subunit beta-1 Length=877 Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 6/132 (4%) Query 5 AGPPNWQLNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKAVAEA 64 +G P+ +++W+ YV ELR A L ++ +YAL + L+ + +L ++ + Sbjct 744 SGSPD---SDDWVNYVFELRDAILLTYSNIIYALIDGNEINKLKPYIPNILDFIELIL-I 799 Query 65 PTWVHGSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLATE--EGNAAV 122 H +AQ Q ++ L GDL+ +G L + ++ + + + L+++ E Sbjct 800 KEINHFNAQNFQNSVSLLGDLVHAYGYELIENSKLTDLIISVYGKIDILSSQGDEKCETC 859 Query 123 GAKAQWLAQLLN 134 +K +WL ++ N Sbjct 860 VSKIKWLKRICN 871 > dre:570700 kpnb1, MGC123184, wu:fc12b10, zgc:123184; karyopherin (importin) beta 1; K14293 importin subunit beta-1 Length=876 Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query 15 EWIWYVHELRSATLEALASCVYALKEAQLQ-----EVLRKEVNGMLQVVKAVAEAPTWVH 69 + + Y++ELR LEA + LK Q +++ V +L + +AE Sbjct 753 DMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSFIHHIAEDEDRSD 812 Query 70 GSAQMVQQALELTGDLLSTFGRTL 93 G +V A+ L GDL +TFG+ + Sbjct 813 G---VVANAVGLIGDLCTTFGKDV 833 > mmu:320253 March3, 6330411I15Rik, A530081L18Rik, AI843639, MARCH-III, MGC130167, MGC130168; membrane-associated ring finger (C3HC4) 3; K10658 E3 ubiquitin-protein ligase MARCH3 [EC:6.3.2.19] Length=218 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 0/55 (0%) Query 39 KEAQLQEVLRKEVNGMLQVVKAVAEAPTWVHGSAQMVQQALELTGDLLSTFGRTL 93 + + L EVL + VVK V + + V+G Q V Q G LLST RTL Sbjct 5 RCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTL 59 > hsa:115123 MARCH3, FLJ20096, MARCH-III, MGC48332, RNF173; membrane-associated ring finger (C3HC4) 3; K10658 E3 ubiquitin-protein ligase MARCH3 [EC:6.3.2.19] Length=253 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 0/56 (0%) Query 39 KEAQLQEVLRKEVNGMLQVVKAVAEAPTWVHGSAQMVQQALELTGDLLSTFGRTLG 94 + + L EVL + VVK V + + V+G Q V Q G LLST RTL Sbjct 5 RCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLA 60 > mmu:16211 Kpnb1, AA409963, IPOB, Impnb, MGC8315; karyopherin (importin) beta 1; K14293 importin subunit beta-1 Length=876 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query 15 EWIWYVHELRSATLEALASCVYALKEAQLQ-----EVLRKEVNGMLQVVKAVAEAPTWVH 69 + + Y++ELR + LEA V LK Q +++ V +L + +A Sbjct 753 DMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTD 812 Query 70 GSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLATEEG 118 G +V A L GDL + FG+ + + + +L E R T + Sbjct 813 G---VVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKA 858 > hsa:3837 KPNB1, IMB1, IPO1, IPOB, Impnb, MGC2155, MGC2156, MGC2157, NTF97; karyopherin (importin) beta 1; K14293 importin subunit beta-1 Length=876 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query 15 EWIWYVHELRSATLEALASCVYALKEAQLQ-----EVLRKEVNGMLQVVKAVAEAPTWVH 69 + + Y++ELR + LEA V LK Q +++ V +L + +A Sbjct 753 DMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTD 812 Query 70 GSAQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLATEEG 118 G +V A L GDL + FG+ + + + +L E R T + Sbjct 813 G---VVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKA 858 > ath:AT3G08947 binding / protein transporter; K14293 importin subunit beta-1 Length=873 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 6/114 (5%) Query 12 LNEEWIWYVHELRSATLEALASCVYALKEAQLQEVLRKEVNGMLQVVKAVAEAPTWVHGS 71 L+EE + Y ++LR + EA + + K+ + E++ +LQ V+ V++ P Sbjct 753 LDEELMDYANQLRRSIFEAYSGILQGFKDTK-AELMMPYAQHLLQFVELVSKDPLR---D 808 Query 72 AQMVQQALELTGDLLSTFGRTLGGHLSTASFVLQLQREAERLATEEGNAAVGAK 125 + + A+ GDL G +F + E L +E+ + V A+ Sbjct 809 ESVTKAAVAAMGDLADVVGENTKQLFQNFTFFGEFLNEC--LESEDEDLKVTAR 860 > mmu:329366 4932418E24Rik; RIKEN cDNA 4932418E24 gene Length=958 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%) Query 29 EALASCVYALKEAQLQEVLRKEVNGML-QVVKAVAEAPTWVHGSAQMVQQALELTGDLLS 87 +ALA+ L+ +LQEV RK+ +L + + V++ + M +E G L S Sbjct 611 KALAAHTLELRNQRLQEVYRKQREAVLGKDIPVVSQRRPGIVTFVPMQSGGMEAPGSLGS 670 Query 88 ---------TFGRTLGGHLSTASFVLQLQREAERLATEE 117 T G LG + SF L L + R+ T++ Sbjct 671 PREQTWSKVTSGMVLGDQEAPDSFCLCLNKPWNRIETQD 709 > xla:379969 gtf2h1, MGC53309; general transcription factor IIH, polypeptide 1, 62kDa; K03141 transcription initiation factor TFIIH subunit 1 Length=532 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query 38 LKEAQLQEVLRKE----VNGMLQVVKAVAEAPTWVHGSAQMVQQALELTGDLLSTF 89 +K+ +LQE + E NGM +V + ++ + HG + Q + D+LS+F Sbjct 348 VKKVKLQEAIEYEDLDQTNGMKPIVLNLKKSDRYYHGPTPIQSQQYASSQDILSSF 403 > cel:R05G6.10 hypothetical protein Length=461 Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query 10 WQLNEEWIWYVHELRSATLEALASC----VYALKEAQLQEVLRKEVNGMLQVVKAVAEAP 65 W N + + +R+ E L C Y K +LQ LR +N + + KAVA Sbjct 113 WATNIPYDFKTEYMRTRLNELLRLCAVDKTYQQKTTELQSTLRSSLNKLDRYEKAVANLQ 172 Query 66 TWVHGSAQMVQQALELTG 83 + + + +Q+ +TG Sbjct 173 KALSENTNLPEQSDSMTG 190 > mmu:69349 1700008O03Rik; RIKEN cDNA 1700008O03 gene Length=196 Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query 94 GGHLSTASFVLQLQREAERLATEEGNAAVGAKAQWLAQLLNHY 136 G H T SF++ L+ E ++ G A +K Q+L Q+++ Y Sbjct 17 GSHRETGSFLVDLESMEESMSRSLGKPAKSSK-QYLRQVISEY 58 Lambda K H 0.315 0.128 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2428006156 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40