bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0924_orf1
Length=72
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40... 130 1e-30
mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI8450... 96.7 2e-20
hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ119... 96.7 2e-20
dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-... 96.3 2e-20
xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-5... 95.1 4e-20
dre:570074 WD40 repeat-containing protein SMU1-like; K13111 WD... 94.0 1e-19
ath:AT1G73720 transducin family protein / WD-40 repeat family ... 92.0 4e-19
pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;... 83.6 2e-16
bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containi... 74.7 6e-14
cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family memb... 64.7 7e-11
hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,... 37.4 0.012
xla:734892 hypothetical protein MGC130867; K03130 transcriptio... 36.2 0.023
dre:798858 im:7140700; K11798 bromodomain and WD repeat domain... 36.2 0.024
mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polym... 35.4 0.049
mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38 35.0
mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autop... 34.7 0.072
ath:AT5G64730 transducin family protein / WD-40 repeat family ... 33.9 0.12
ath:AT5G08390 hypothetical protein 33.9 0.12
tgo:TGME49_072350 poly(A)+ RNA export protein, putative ; K142... 33.5 0.16
ath:AT3G21060 transducin family protein / WD-40 repeat family ... 33.1 0.20
tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-contain... 33.1 0.22
hsa:253769 WDR27, MGC43690; WD repeat domain 27 32.7
ath:AT2G16780 MSI2; MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2); K10... 32.7 0.28
bbo:BBOV_II001010 18.m06073; periodic tryptophan protein 2-lik... 32.7 0.28
ath:AT3G09080 transducin family protein / WD-40 repeat family ... 32.7 0.31
ath:AT1G11160 nucleotide binding 32.3 0.37
hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1 c... 32.3 0.40
hsa:282809 POC1B, FLJ14923, FLJ41111, PIX1, TUWD12, WDR51B; PO... 32.3 0.40
tgo:TGME49_000280 WD-repeat protein, putative (EC:2.7.11.1) 32.0 0.45
mmu:93871 Brwd1, 5330419I02Rik, D530019K20Rik, G1-403-16, Wdr9... 32.0 0.49
dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat d... 32.0 0.50
sce:YCR084C TUP1, AAR1, AER2, AMM1, CRT4, CYC9, FLK1, ROX4, SF... 32.0 0.52
cel:R06A4.9 hypothetical protein 32.0 0.53
ath:AT1G61210 WD-40 repeat family protein / katanin p80 subuni... 31.6 0.56
xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/... 31.6 0.60
sce:YDL145C COP1, RET1, SEC33, SOO1; Alpha subunit of COPI ves... 31.6 0.64
sce:YKL021C MAK11; Mak11p; K14830 protein MAK11 31.6 0.64
xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centri... 31.6 0.64
mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3... 31.6 0.66
hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPAS... 31.6 0.66
mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;... 31.6 0.68
mmu:382236 Brwd3, Brodl, D030064D06Rik, Gm596; bromodomain and... 31.6 0.69
dre:494534 cdc40, zgc:86860; cell division cycle 40 homolog (S... 31.6 0.72
mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protei... 31.2 0.79
mmu:83946 Phip, 2810004D21Rik, 4632404O06Rik, Ndrp, Wdr11; ple... 31.2 0.80
hsa:55023 PHIP, DCAF14, FLJ20705, FLJ45918, MGC90216, WDR11, n... 31.2 0.80
mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar prote... 31.2 0.87
xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat dom... 31.2 0.93
xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repe... 31.2 0.94
hsa:254065 BRWD3, BRODL, FLJ33254, FLJ38568, MRX93; bromodomai... 30.8 0.95
> tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40
repeat-containing protein SMU1
Length=521
Score = 130 bits (326), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/72 (73%), Positives = 64/72 (88%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFV AC+SP EW+ CAGED++LYCFANATGKLEHVMKIH++D IG+AHHP +NV+ S
Sbjct 450 GGDFVFACLSPRGEWLYCAGEDNTLYCFANATGKLEHVMKIHEKDTIGVAHHPHHNVMAS 509
Query 61 WGFDGCLNVLKP 72
WG DGCLN+L+P
Sbjct 510 WGCDGCLNLLRP 521
> mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI845086,
AW556129, Bwd; smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans); K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 96.7 bits (239), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFV +SP EW+ C GED LYCF+ TGKLE + +H++DVIG+AHHP N++ +
Sbjct 442 GGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIAT 501
Query 61 WGFDGCLNVLKP 72
+ DG L + KP
Sbjct 502 YSEDGLLKLWKP 513
> hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970,
MGC117363, RP11-54K16.3, SMU-1, fSAP57; smu-1 suppressor
of mec-8 and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 96.7 bits (239), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFV +SP EW+ C GED LYCF+ TGKLE + +H++DVIG+AHHP N++ +
Sbjct 442 GGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIAT 501
Query 61 WGFDGCLNVLKP 72
+ DG L + KP
Sbjct 502 YSEDGLLKLWKP 513
> dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 96.3 bits (238), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFV +SP EW+ C GED+ LYCF+ TGKLE + +H++DVIG+AHHP N++ +
Sbjct 442 GGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGT 501
Query 61 WGFDGCLNVLKP 72
+ DG L + KP
Sbjct 502 YSEDGLLKLWKP 513
> xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-52
homolog; K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 95.1 bits (235), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFV +SP EW+ C GED LYCF+ TGKLE + +H++DVIG+AHHP N++ +
Sbjct 442 GGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGT 501
Query 61 WGFDGCLNVLKP 72
+ DG L + KP
Sbjct 502 YSEDGLLKLWKP 513
> dre:570074 WD40 repeat-containing protein SMU1-like; K13111
WD40 repeat-containing protein SMU1
Length=513
Score = 94.0 bits (232), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
G DFV +SP EW+ C GED+ LYCF+ TGKLE + +H++DVIG+AHHP N++ +
Sbjct 442 GADFVCCTLSPRGEWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGIAHHPHQNLIAT 501
Query 61 WGFDGCLNVLKP 72
+ DG L + KP
Sbjct 502 YSEDGLLKLWKP 513
> ath:AT1G73720 transducin family protein / WD-40 repeat family
protein; K13111 WD40 repeat-containing protein SMU1
Length=511
Score = 92.0 bits (227), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 0/72 (0%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GGDFVAACVS +W+ C GED LYCF +G LEH M +H++DVIG+ HHP N++ +
Sbjct 440 GGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLAT 499
Query 61 WGFDGCLNVLKP 72
+ D + + KP
Sbjct 500 YSEDCTMKLWKP 511
> pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;
K13111 WD40 repeat-containing protein SMU1
Length=527
Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 50/68 (73%), Gaps = 0/68 (0%)
Query 4 FVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGF 63
F+ AC+SP+ ++V C ED++LYCF T KL + MKIHD+D++G+ HH + N++ SW
Sbjct 460 FLYACISPNFKYVYCIAEDYNLYCFDYNTSKLLNQMKIHDKDILGIIHHNNQNIMASWSL 519
Query 64 DGCLNVLK 71
DG LN+++
Sbjct 520 DGKLNIIQ 527
> bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containing
protein; K13111 WD40 repeat-containing protein SMU1
Length=533
Score = 74.7 bits (182), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query 3 DFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWG 62
+F+ VS WV GE + LYCF N G LE+ ++H++DVIGLAHHP + V+ +W
Sbjct 464 NFLDVAVSRKMNWVYTVGEGNQLYCF-NKAGPLEYTFRVHEKDVIGLAHHPQDAVLATWS 522
Query 63 FDGCLNVLKP 72
DG + +L P
Sbjct 523 LDGTIKLLYP 532
> cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family member
(smu-1); K13111 WD40 repeat-containing protein SMU1
Length=510
Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 0/68 (0%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
GDF+ +SP EW ED +YCF +G LE + + ++ IGLAHHP N++ S+
Sbjct 440 GDFINCILSPKGEWAYAIAEDGVMYCFMVLSGTLETTLPVTERLPIGLAHHPHQNLIASY 499
Query 62 GFDGCLNV 69
DG L +
Sbjct 500 AEDGLLKL 507
> hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,
FLJ10828, FLJ22677, IBD10, WDR30; ATG16 autophagy related
16-like 1 (S. cerevisiae)
Length=523
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVM-KIHDQDVIGLAHHPSNNVVV 59
G D+ SP +V + SLY ++ TGK+E V+ K H + +A PS + VV
Sbjct 450 GSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVV 509
Query 60 SWGFDGCLNVL 70
S GC VL
Sbjct 510 SVD-KGCKAVL 519
> xla:734892 hypothetical protein MGC130867; K03130 transcription
initiation factor TFIID subunit 5
Length=588
Score = 36.2 bits (82), Expect = 0.023, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 0/68 (0%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
G + SP+ +++ AGED L + A+G L ++ H ++ L P +N++ S
Sbjct 468 GPVLTLAFSPNGKYLASAGEDQRLRLWDLASGTLYKELRGHTDNISSLTFSPDSNLIASG 527
Query 62 GFDGCLNV 69
D + V
Sbjct 528 SMDNSVRV 535
> dre:798858 im:7140700; K11798 bromodomain and WD repeat domain
containing protein 1/3
Length=2191
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query 12 HAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSN-NVVVSWGFDG 65
H V+ A +H L + + TG+L HV+K H+ +V L HP + +++S G DG
Sbjct 443 HDNTVITAVNNHLLKVWNSYTGQLLHVLKGHEAEVFVLEPHPYDPRIMLSAGHDG 497
> mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated factor;
K03130 transcription initiation factor TFIID subunit 5
Length=589
Score = 35.4 bits (80), Expect = 0.049, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 0/68 (0%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
G ++ SP+ +++ AGED L + A+G L ++ H + LA P + ++ S
Sbjct 469 GPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASA 528
Query 62 GFDGCLNV 69
D + V
Sbjct 529 SMDNSVRV 536
> mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38
Length=303
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 0/63 (0%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
G + C SP + + DHS+ + A K HV+K H + V ++ P + + S
Sbjct 69 GPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASG 128
Query 62 GFD 64
G+D
Sbjct 129 GWD 131
> mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autophagy-related
16-like 1 (yeast)
Length=623
Score = 34.7 bits (78), Expect = 0.072, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVM-KIHDQDVIGLAHHPSNNVVV 59
G D+ SP +V + SLY ++ TGK+E V+ K H + +A PS VV
Sbjct 550 GSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVV 609
Query 60 S 60
S
Sbjct 610 S 610
> ath:AT5G64730 transducin family protein / WD-40 repeat family
protein; K13124 mitogen-activated protein kinase organizer
1
Length=299
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S +A++ C G D +Y + +TG++ + HD +V + + S++VVVS GFD L V
Sbjct 70 SDNAKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRV 128
> ath:AT5G08390 hypothetical protein
Length=839
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 0/44 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP 53
+P W++ GED+ + + GKL H K H+ + L HP
Sbjct 152 TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP 195
> tgo:TGME49_072350 poly(A)+ RNA export protein, putative ; K14298
mRNA export factor
Length=375
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDG 65
SP+ +V C + LY NA+ V+ HDQ V +A +P +NV+V+ +DG
Sbjct 96 SPNHLFVGCCDKTVKLYDL-NASSSTPQVVAQHDQPVCSVAWNPIHNVIVTASWDG 150
> ath:AT3G21060 transducin family protein / WD-40 repeat family
protein; K14961 COMPASS component SWD1
Length=547
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query 6 AACVSPHAEWVL----CAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
A C S EWV+ C GE H +Y + A G L +++ + +I LA HP + ++VS
Sbjct 297 APCFSGDGEWVVGGSACKGE-HKIYIWDRA-GHLVKILEGPKEALIDLAWHPVHPIIVSV 354
Query 62 GFDG 65
G
Sbjct 355 SLAG 358
> tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-containing
protein SMU1
Length=526
Score = 33.1 bits (74), Expect = 0.22, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 0/32 (0%)
Query 9 VSPHAEWVLCAGEDHSLYCFANATGKLEHVMK 40
VS EW+ G+D +YCF +G L++V+K
Sbjct 478 VSKKFEWLYALGDDDQVYCFNFKSGSLDNVLK 509
> hsa:253769 WDR27, MGC43690; WD repeat domain 27
Length=730
Score = 32.7 bits (73), Expect = 0.27, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 0/61 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP + C ED Y + + H + H V G+A +PS + + DG L +
Sbjct 667 SPCGRFAACGAEDRHAYVYEMGSSTFSHRLAGHTDTVTGVAFNPSAPQLATATLDGKLQL 726
Query 70 L 70
Sbjct 727 F 727
> ath:AT2G16780 MSI2; MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2); K10752
histone-binding protein RBBP4
Length=415
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 0/43 (0%)
Query 18 CAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
AGED L + T +++H +K+H+++V L+ +P N V++
Sbjct 235 SAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLA 277
> bbo:BBOV_II001010 18.m06073; periodic tryptophan protein 2-like
protein; K14558 periodic tryptophan protein 2
Length=988
Score = 32.7 bits (73), Expect = 0.28, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query 16 VLCAG---EDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPS---NNVVVSWGFDGCLNV 69
++CAG E +S++ ++ TGKL + H V G+A HP+ + +VS +D +NV
Sbjct 514 IICAGSRGESNSVFIWSLQTGKLLDELHGHSSAVTGVAFHPNLSYSGFLVSASWDKTINV 573
> ath:AT3G09080 transducin family protein / WD-40 repeat family
protein
Length=1026
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFAN-ATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
GD V + P +++C+ + ++ CF + TG+L H + V G+ P ++S
Sbjct 571 GDPVKVILDPSCNYLVCSYSNRTI-CFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIIS 629
Query 61 WGFDGCLNVLK 71
DGC+ V K
Sbjct 630 VASDGCIFVWK 640
> ath:AT1G11160 nucleotide binding
Length=1021
Score = 32.3 bits (72), Expect = 0.37, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 0/44 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP 53
SP WV+ G D+ + + GKL H K H+ + L HP
Sbjct 151 SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 194
> hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1
centriolar protein homolog A (Chlamydomonas)
Length=359
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 11 PHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNVL 70
P + AG D+++ + T +L ++H V GL+ HPS N +++ D L +L
Sbjct 197 PSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKIL 256
> hsa:282809 POC1B, FLJ14923, FLJ41111, PIX1, TUWD12, WDR51B;
POC1 centriolar protein homolog B (Chlamydomonas)
Length=436
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 0/61 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
+P + AG D ++ + KL ++H V ++ HPS N +++ DG L +
Sbjct 153 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Query 70 L 70
L
Sbjct 213 L 213
> tgo:TGME49_000280 WD-repeat protein, putative (EC:2.7.11.1)
Length=834
Score = 32.0 bits (71), Expect = 0.45, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHV--MKIHDQDVIGLAHHPSNNVVVSWGFDGCL 67
SP EW+ + ++ SL K E V +++H++ G+A PS ++ + G D L
Sbjct 625 SPDGEWLATSHQNGSLSVLNVRAEKCERVASLQLHEEAATGVAFDPSGRLLATQGKDKQL 684
Query 68 NVL 70
V+
Sbjct 685 KVV 687
> mmu:93871 Brwd1, 5330419I02Rik, D530019K20Rik, G1-403-16, Wdr9,
repro5; bromodomain and WD repeat domain containing 1; K11798
bromodomain and WD repeat domain containing protein 1/3
Length=2259
Score = 32.0 bits (71), Expect = 0.49, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query 16 VLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP-SNNVVVSWGFDGCL 67
V+ A DH L +++ TG+L H + H +V L HP + +++S G DG +
Sbjct 441 VVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSI 493
> dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+W++ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 272 KWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP EW+ + D + + GK E + H + +A +N++VS D L +
Sbjct 54 SPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S + ++ A +D +L + ++GK +K H V +P +N++VS FD + +
Sbjct 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
> sce:YCR084C TUP1, AAR1, AER2, AMM1, CRT4, CYC9, FLK1, ROX4,
SFL2, UMR7; General repressor of transcription, forms complex
with Cyc8p, involved in the establishment of repressive chromatin
structure through interactions with histones H3 and
H4, appears to enhance expression of some genes; K06666 glucose
repression regulatory protein TUP1
Length=713
Score = 32.0 bits (71), Expect = 0.52, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 0/55 (0%)
Query 6 AACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+ C SP +++ ED + + K+ +++ H+QD+ L + PS + +VS
Sbjct 448 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 502
> cel:R06A4.9 hypothetical protein
Length=809
Score = 32.0 bits (71), Expect = 0.53, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query 12 HAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP-SNNVVVSWGFDGCL 67
+ W+L G DH + + K + H ++VI LA HP + VS G DG +
Sbjct 314 NGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSI 370
> ath:AT1G61210 WD-40 repeat family protein / katanin p80 subunit,
putative
Length=1180
Score = 31.6 bits (70), Expect = 0.56, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 0/44 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP 53
+P WV+ G D+ + + GKL H K H+ + L HP
Sbjct 151 TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP 194
> xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65kDa; K03130
transcription initiation factor TFIID subunit 5
Length=587
Score = 31.6 bits (70), Expect = 0.60, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 0/68 (0%)
Query 2 GDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSW 61
G + SP+ +++ AGED L + A+G ++ H ++ L P ++++ S
Sbjct 467 GPVLTLAFSPNGKYLASAGEDQRLKLWDLASGTQYKELRGHTDNISSLTFSPDSSLIASA 526
Query 62 GFDGCLNV 69
D + V
Sbjct 527 SMDNSVRV 534
> sce:YDL145C COP1, RET1, SEC33, SOO1; Alpha subunit of COPI vesicle
coatomer complex, which surrounds transport vesicles
in the early secretory pathway; K05236 coatomer protein complex,
subunit alpha (xenin)
Length=1201
Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 0/59 (0%)
Query 11 PHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
P WVL A ++ + G L H + H+ V GL HP+ + VS G D + V
Sbjct 21 PSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKV 79
> sce:YKL021C MAK11; Mak11p; K14830 protein MAK11
Length=468
Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Query 10 SPHAEWVLCAGEDHSLYCFA----NATGKLE-HVMKIHDQDVIGLAHHPSNNVVVS 60
S +++W+L A EDH + + G L+ H +++D D+ HP+N + +S
Sbjct 170 SKNSKWLLSASEDHKIMVWRVKDWETVGTLKGHTARVNDVDI-----HPTNRIAIS 220
> xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centriolar
protein homolog B (Chlamydomonas)
Length=468
Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 0/55 (0%)
Query 16 VLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNVL 70
V AG D ++ + KL ++H+ V L+ HPS N +++ DG L +L
Sbjct 201 VASAGADSTVKVWDIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKIL 255
> mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3;
WD repeat domain 5; K14963 COMPASS component SWD3
Length=334
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+W++ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP+ EW+ + D + + GK E + H + +A +N++VS D L +
Sbjct 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S + ++ A +D +L + ++GK +K H V +P +N++VS FD + +
Sbjct 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
> hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPASS
component SWD3
Length=334
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+W++ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP+ EW+ + D + + GK E + H + +A +N++VS D L +
Sbjct 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S + ++ A +D +L + ++GK +K H V +P +N++VS FD + +
Sbjct 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
> mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;
K14963 COMPASS component SWD3
Length=328
Score = 31.6 bits (70), Expect = 0.68, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+WV+ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 266 KWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312
> mmu:382236 Brwd3, Brodl, D030064D06Rik, Gm596; bromodomain and
WD repeat domain containing 3; K11798 bromodomain and WD
repeat domain containing protein 1/3
Length=1799
Score = 31.6 bits (70), Expect = 0.69, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query 16 VLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP-SNNVVVSWGFDG 65
V+ A + L + + TG+L H + HD +V L HP +++S G DG
Sbjct 438 VITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDG 488
> dre:494534 cdc40, zgc:86860; cell division cycle 40 homolog
(S. cerevisiae); K12816 pre-mRNA-processing factor 17
Length=578
Score = 31.6 bits (70), Expect = 0.72, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP-SNNVVVSWGFDG 65
SP +V+ D L + T KL H +K HD+ I HP + V++ G+DG
Sbjct 516 SPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDG 572
> mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protein
homolog A (Chlamydomonas)
Length=405
Score = 31.2 bits (69), Expect = 0.79, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 0/60 (0%)
Query 11 PHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNVL 70
P + AG D+++ + T +L ++H V L+ HPS N +++ D L +L
Sbjct 197 PSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL 256
> mmu:83946 Phip, 2810004D21Rik, 4632404O06Rik, Ndrp, Wdr11; pleckstrin
homology domain interacting protein; K11797 PH-interacting
protein
Length=1821
Score = 31.2 bits (69), Expect = 0.80, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query 12 HAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSN-NVVVSWGFDG 65
H V+ A + +L + + TG+L HV+ H+ +V L HP + V+ S G DG
Sbjct 435 HDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDG 489
> hsa:55023 PHIP, DCAF14, FLJ20705, FLJ45918, MGC90216, WDR11,
ndrp; pleckstrin homology domain interacting protein; K11797
PH-interacting protein
Length=1821
Score = 31.2 bits (69), Expect = 0.80, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query 12 HAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSN-NVVVSWGFDG 65
H V+ A + +L + + TG+L HV+ H+ +V L HP + V+ S G DG
Sbjct 435 HDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDG 489
> mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar protein
homolog B (Chlamydomonas)
Length=476
Score = 31.2 bits (69), Expect = 0.87, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 0/61 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
+P+ + AG DH++ + KL ++H V L+ HP N +V+ DG + +
Sbjct 195 NPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKM 254
Query 70 L 70
L
Sbjct 255 L 255
> xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat domain
5; K14963 COMPASS component SWD3
Length=334
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+W++ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIAS 318
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP+ EW+ + D + + GK E + H + +A +N++VS D L +
Sbjct 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S + ++ A +D +L + ++GK +K H V +P +N++VS FD + +
Sbjct 96 SSDSNLLVSASDDKTLKIWDISSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
> xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 14 EWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60
+W++ ED+ +Y + T ++ ++ H VI A HP+ N++ S
Sbjct 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIAS 318
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
SP+ EW+ + D + + GK E + H + +A +N++VS D L +
Sbjct 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 0/60 (0%)
Query 10 SPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVSWGFDGCLNV 69
S + ++ A +D +L + ++GK +K H V +P +N++VS FD + +
Sbjct 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
> hsa:254065 BRWD3, BRODL, FLJ33254, FLJ38568, MRX93; bromodomain
and WD repeat domain containing 3; K11798 bromodomain and
WD repeat domain containing protein 1/3
Length=1802
Score = 30.8 bits (68), Expect = 0.95, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query 16 VLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHP-SNNVVVSWGFDG 65
V+ A + L + + TG+L H + HD +V L HP +++S G DG
Sbjct 438 VITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDG 488
Lambda K H
0.323 0.139 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2016064836
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40