bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0947_orf1 Length=238 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_032300 40S ribosomal protein S3, putative ; K02985 ... 398 1e-110 tpv:TP04_0421 40S ribosomal protein S3; K02985 small subunit r... 368 8e-102 cpv:cgd7_2250 40S ribosomal protein S3, KH domain ; K02985 sma... 365 7e-101 bbo:BBOV_II001650 18.m06128; 40S ribosomal protein S3 protein;... 358 7e-99 pfa:PF14_0627 40S ribosomal protein S3, putative; K02985 small... 350 3e-96 ath:AT2G31610 40S ribosomal protein S3 (RPS3A); K02985 small s... 345 1e-94 ath:AT5G35530 40S ribosomal protein S3 (RPS3C); K02985 small s... 344 2e-94 ath:AT3G53870 40S ribosomal protein S3 (RPS3B); K02985 small s... 343 3e-94 xla:444841 rps3-a, MGC53327, rps3; ribosomal protein S3; K0298... 334 2e-91 mmu:27050 Rps3, D7Ertd795e, Rs_3; ribosomal protein S3; K02985... 332 6e-91 hsa:6188 RPS3, FLJ26283, FLJ27450, MGC87870; ribosomal protein... 332 8e-91 dre:336550 rps3, MGC56088, fb13d09, wu:fb13d09, zgc:56088; rib... 332 9e-91 xla:443740 rps3-b, rpls1b, rpls3-b; ribosomal protein S3 332 9e-91 cel:C23G10.3 rps-3; Ribosomal Protein, Small subunit family me... 310 3e-84 sce:YNL178W RPS3, SUF14; Rps3p; K02985 small subunit ribosomal... 283 3e-76 eco:b3314 rpsC, ECK3301, JW3276; 30S ribosomal subunit protein... 46.2 1e-04 ath:ArthCp061 rps3; 30S ribosomal protein S3; K02982 small sub... 37.4 0.047 hsa:22995 CEP152, FLJ21594, KIAA0912, MCPH4; centrosomal prote... 36.2 0.12 mmu:70902 Lpcat2b, 4921521K07Rik, Aytl1b; lysophosphatidylchol... 33.9 0.57 mmu:17755 Mtap1b, A230055D22, AI843217, LC1, MAP1B, MAP5, MGC1... 32.3 1.4 xla:495686 usp47; ubiquitin specific peptidase 47; K11857 ubiq... 32.0 2.0 mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152 31.2 tgo:TGME49_118610 hypothetical protein 30.0 8.6 sce:YCR014C POL4; DNA polymerase IV, undergoes pair-wise inter... 29.6 9.4 > tgo:TGME49_032300 40S ribosomal protein S3, putative ; K02985 small subunit ribosomal protein S3e Length=235 Score = 398 bits (1022), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 199/228 (87%), Positives = 210/228 (92%), Gaps = 1/228 (0%) Query 6 MAANTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREV 65 MA+ N KKRKFV DGVFQAELNEFLS TL+EDGYSGVEVRVTPIRTEIIIRATRTREV Sbjct 1 MASTGNTCKKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREV 60 Query 66 LGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA 125 LG+KGRRIRELTS+VQKRFGF PDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA Sbjct 61 LGDKGRRIRELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA 120 Query 126 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLR 185 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKF+DGY+ISTGEP + FV QAIRSVQLR Sbjct 121 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLR 180 Query 186 QGVLGVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPELPVAVQDPEL 233 QGVLGVRV IMLP DPEGK GP+ PLPDTIIV +PKPE+PV VQ E+ Sbjct 181 QGVLGVRVKIMLPHDPEGKRGPANPLPDTIIVMDPKPEIPV-VQPEEM 227 > tpv:TP04_0421 40S ribosomal protein S3; K02985 small subunit ribosomal protein S3e Length=216 Score = 368 bits (945), Expect = 8e-102, Method: Compositional matrix adjust. Identities = 174/209 (83%), Positives = 196/209 (93%), Gaps = 0/209 (0%) Query 13 SKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKGRR 72 SK+++F+NDGVF AELNEFLSRTLAEDGYSGVE+R+TP+RTEIIIRATRTREVLGEK RR Sbjct 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67 Query 73 IRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRH 132 IRELTSLVQKRFGF DSVEL+AERVENRGLCAMAQAESLRYKLLKGLA+RRA YGVLR Sbjct 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 127 Query 133 IMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLGVR 192 IMESGAKGCEV+VSGKLRAQRAKSMKF+DGYIISTG+P Q +V+ A+RSVQLRQGVLG++ Sbjct 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 187 Query 193 VSIMLPFDPEGKMGPSTPLPDTIIVSEPK 221 V IMLP+DPEG++GPST LPDT+ V +PK Sbjct 188 VKIMLPYDPEGRLGPSTLLPDTVTVLDPK 216 > cpv:cgd7_2250 40S ribosomal protein S3, KH domain ; K02985 small subunit ribosomal protein S3e Length=221 Score = 365 bits (937), Expect = 7e-101, Method: Compositional matrix adjust. Identities = 176/215 (81%), Positives = 199/215 (92%), Gaps = 1/215 (0%) Query 12 ISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKGR 71 ISKKRKF+NDGVF+AELNEFLS TLAEDGY+GVEVRVTPI+TEIIIRATRTREVLG KGR Sbjct 6 ISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVLGVKGR 65 Query 72 RIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLR 131 RIRELTSL+QKRF FP SVELFAER+ENRGLCAMAQAESLRYKLLKG+AVRRACYGVLR Sbjct 66 RIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLR 125 Query 132 HIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLGV 191 H+MESGAKGCEV+VSGKLRAQRAKSMKFRDGY+I+TG+P + FV +A+R+V ++QGVLGV Sbjct 126 HVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGV 185 Query 192 RVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPELPV 226 +V IMLP+DPEGK GPS PLPD ++V EPK E P+ Sbjct 186 QVKIMLPYDPEGKTGPSKPLPDAVMVREPK-EYPI 219 > bbo:BBOV_II001650 18.m06128; 40S ribosomal protein S3 protein; K02985 small subunit ribosomal protein S3e Length=223 Score = 358 bits (920), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 171/219 (78%), Positives = 194/219 (88%), Gaps = 0/219 (0%) Query 6 MAANTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREV 65 M T S RKF+ DGVF AELNEFLSR LAEDGYSGVE+R+TP+RTEIIIRATR REV Sbjct 1 MRGFTRKSMCRKFIGDGVFNAELNEFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREV 60 Query 66 LGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA 125 +GEK RRIRELTSL+QKRFGF PD+VEL+AERVE++GLCAMAQAESLRYKLLKGLAVRRA Sbjct 61 VGEKARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRA 120 Query 126 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLR 185 YGVLRHIMESGAKGCEV+VSGKLRAQRAKSMKF+DGY+ISTG+P + FV+ A RSVQLR Sbjct 121 AYGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLR 180 Query 186 QGVLGVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 QGVLG++V IM P DPEG++GPST +PDTI V EP P++ Sbjct 181 QGVLGIKVKIMHPHDPEGRLGPSTVMPDTITVKEPSPDM 219 > pfa:PF14_0627 40S ribosomal protein S3, putative; K02985 small subunit ribosomal protein S3e Length=221 Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 173/213 (81%), Positives = 191/213 (89%), Gaps = 1/213 (0%) Query 12 ISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKGR 71 ISKKRKF+NDGVFQAELNEFL+R LAEDGYSGVEVRVTPIRTE+IIRATRTREVLG+KGR Sbjct 5 ISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGR 64 Query 72 RIRELTSLVQKRF-GFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 130 RIRELTSLVQKRF +SVELFAERVE+RGLCAMAQAESLRYKLLKGLAVRRACYGVL Sbjct 65 RIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVL 124 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLG 190 RHIMESGAKGCEV+VSGKLRAQRAKSMKFRDGY+ISTGEP +RFV+ A RS QL+QGVLG Sbjct 125 RHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLG 184 Query 191 VRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPE 223 ++V IMLP + + G ++ LPD I V EPK + Sbjct 185 IKVKIMLPTAIDTRTGLTSILPDNISVLEPKTD 217 > ath:AT2G31610 40S ribosomal protein S3 (RPS3A); K02985 small subunit ribosomal protein S3e Length=250 Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 164/215 (76%), Positives = 188/215 (87%), Gaps = 0/215 (0%) Query 10 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 69 T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK Sbjct 3 TQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62 Query 70 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 129 GRRIRELTSLVQKRF FP DSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV Sbjct 63 GRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122 Query 130 LRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVL 189 LR +MESGAKGCEV+VSGKLRA RAKSMKF+DGY++S+G+P + ++ A+R V LRQGVL Sbjct 123 LRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVL 182 Query 190 GVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 G++V IML +DP GK GP TPLPD +I+ PK ++ Sbjct 183 GIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDV 217 > ath:AT5G35530 40S ribosomal protein S3 (RPS3C); K02985 small subunit ribosomal protein S3e Length=248 Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 164/214 (76%), Positives = 188/214 (87%), Gaps = 0/214 (0%) Query 10 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 69 T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK Sbjct 3 TQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62 Query 70 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 129 GRRIRELTSLVQKRF FP DSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV Sbjct 63 GRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGV 122 Query 130 LRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVL 189 LR +MESGAKGCEV+VSGKLRA RAKSMKF+DGY++S+G+P + ++ A+R V LRQGVL Sbjct 123 LRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVL 182 Query 190 GVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPE 223 G++V IML +DP+GK GP TPLPD +I+ PK + Sbjct 183 GLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKED 216 > ath:AT3G53870 40S ribosomal protein S3 (RPS3B); K02985 small subunit ribosomal protein S3e Length=249 Score = 343 bits (880), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 163/215 (75%), Positives = 187/215 (86%), Gaps = 0/215 (0%) Query 9 NTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGE 68 T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGE Sbjct 2 TTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61 Query 69 KGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYG 128 KGRRIRELTSLVQKRF FP DSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYG Sbjct 62 KGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121 Query 129 VLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGV 188 VLR +MESGAKGCEV+VSGKLRA RAKSMKF+DGY++S+G+P + ++ A+R V LRQGV Sbjct 122 VLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGV 181 Query 189 LGVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPE 223 LG++V +ML +DP+G GP TPLPD +I+ PK E Sbjct 182 LGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEE 216 > xla:444841 rps3-a, MGC53327, rps3; ribosomal protein S3; K02985 small subunit ribosomal protein S3e Length=246 Score = 334 bits (857), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 162/214 (75%), Positives = 183/214 (85%), Gaps = 0/214 (0%) Query 11 NISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKG 70 ISKKRKFV DG+F+AELNEFL+R LAEDGYSGVEVRVTP RTEIII ATRT+ VLGEKG Sbjct 4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 63 Query 71 RRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 130 RRIRELT++VQKRFGFP SVEL+AE+V RGLCA+AQAESLRYKLL GLAVRRACYGVL Sbjct 64 RRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLG 190 R IMESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V A+R V LRQGVLG Sbjct 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183 Query 191 VRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 ++V IMLP+DP GK+GP PLPD + + EPK E+ Sbjct 184 IKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217 > mmu:27050 Rps3, D7Ertd795e, Rs_3; ribosomal protein S3; K02985 small subunit ribosomal protein S3e Length=243 Score = 332 bits (852), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 162/214 (75%), Positives = 183/214 (85%), Gaps = 0/214 (0%) Query 11 NISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKG 70 ISKKRKFV DG+F+AELNEFL+R LAEDGYSGVEVRVTP RTEIII ATRT+ VLGEKG Sbjct 4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 63 Query 71 RRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 130 RRIRELT++VQKRFGFP SVEL+AE+V RGLCA+AQAESLRYKLL GLAVRRACYGVL Sbjct 64 RRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLG 190 R IMESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V A+R V LRQGVLG Sbjct 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183 Query 191 VRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 ++V IMLP+DP GK+GP PLPD + + EPK E+ Sbjct 184 IKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217 > hsa:6188 RPS3, FLJ26283, FLJ27450, MGC87870; ribosomal protein S3; K02985 small subunit ribosomal protein S3e Length=243 Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 162/214 (75%), Positives = 183/214 (85%), Gaps = 0/214 (0%) Query 11 NISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKG 70 ISKKRKFV DG+F+AELNEFL+R LAEDGYSGVEVRVTP RTEIII ATRT+ VLGEKG Sbjct 4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 63 Query 71 RRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 130 RRIRELT++VQKRFGFP SVEL+AE+V RGLCA+AQAESLRYKLL GLAVRRACYGVL Sbjct 64 RRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLG 190 R IMESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V A+R V LRQGVLG Sbjct 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183 Query 191 VRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 ++V IMLP+DP GK+GP PLPD + + EPK E+ Sbjct 184 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEI 217 > dre:336550 rps3, MGC56088, fb13d09, wu:fb13d09, zgc:56088; ribosomal protein S3; K02985 small subunit ribosomal protein S3e Length=245 Score = 332 bits (850), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 161/214 (75%), Positives = 183/214 (85%), Gaps = 0/214 (0%) Query 11 NISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKG 70 ISKKRKFV+DG+F+AELNEFL+R LAEDGYSGVEVRVTP RTEIII ATRT+ VLGEKG Sbjct 4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 63 Query 71 RRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 130 RRIRELT++VQKRFGFP VEL+AE+V RGLCA+AQAESLRYKLL GLAVRRACYGVL Sbjct 64 RRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLG 190 R IMESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V A+R V LRQGVLG Sbjct 124 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 183 Query 191 VRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 ++V IMLP+DP GK+GP PLPD + + EPK E+ Sbjct 184 IKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEV 217 > xla:443740 rps3-b, rpls1b, rpls3-b; ribosomal protein S3 Length=246 Score = 332 bits (850), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 163/219 (74%), Positives = 186/219 (84%), Gaps = 2/219 (0%) Query 6 MAANTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREV 65 MAA +SKKRKFV DG+F+AELNEFL+R LAEDGYSGVEVRVTP +TEIII ATRT+ V Sbjct 1 MAAQ--MSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNV 58 Query 66 LGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA 125 LGEKGRRIRELT++VQKRFGFP SVEL+AE+V RGLCA+AQAESLRYKLL GLAVRRA Sbjct 59 LGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRA 118 Query 126 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLR 185 CYGVLR IMESGAKGCEVVVSGKLR QRAKSMKF DG +I +G+P +V A+R V LR Sbjct 119 CYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178 Query 186 QGVLGVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 QGVLG++V IMLP+DP GK+GP PLPD + + EPK E+ Sbjct 179 QGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217 > cel:C23G10.3 rps-3; Ribosomal Protein, Small subunit family member (rps-3); K02985 small subunit ribosomal protein S3e Length=247 Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 147/219 (67%), Positives = 179/219 (81%), Gaps = 0/219 (0%) Query 6 MAANTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREV 65 MAAN N++KK+K V G+F+AELN FL + LAEDGYSGVEVR TP R E+II ATRT+ V Sbjct 1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNV 60 Query 66 LGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRA 125 LGE+GRRI+ELTS+VQKRFGF SVEL+AE+V NRGLCA+AQ ESLRYKL+ GLAVRRA Sbjct 61 LGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRA 120 Query 126 CYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLR 185 CYGVLR IMESGA+G EV+VSGKLR QRAK+MKF DG +I +G P ++ QA+R VQLR Sbjct 121 CYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLR 180 Query 186 QGVLGVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPEL 224 QGV+G++V IMLP+DP G+ GP LPD + + EP+ E+ Sbjct 181 QGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEV 219 > sce:YNL178W RPS3, SUF14; Rps3p; K02985 small subunit ribosomal protein S3e Length=240 Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 140/216 (64%), Positives = 174/216 (80%), Gaps = 4/216 (1%) Query 12 ISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKGR 71 ISKKRK V DGVF AELNEF +R LAE+GYSGVEVRVTP +TE+IIRATRT++VLGE GR Sbjct 5 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGR 64 Query 72 RIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLR 131 RI ELT LVQKRF + P ++ L+AERV++RGL A+AQAES+++KLL GLA+RRA YGV+R Sbjct 65 RINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 124 Query 132 HIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLGV 191 ++MESGAKGCEVVVSGKLRA RAK+MKF DG++I +G+P F+ A R V +RQGVLG+ Sbjct 125 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 184 Query 192 RVSIMLPFDP-EGKMGPSTPLPDTIIVSEPKPELPV 226 +V IM DP + + GP LPD + + EPK E P+ Sbjct 185 KVKIMR--DPAKSRTGPKA-LPDAVTIIEPKEEEPI 217 > eco:b3314 rpsC, ECK3301, JW3276; 30S ribosomal subunit protein S3; K02982 small subunit ribosomal protein S3 Length=233 Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 12/200 (6%) Query 1 LSLAKMAANTNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRAT 60 L + K +T + ++F ++ ++ ++L++ LA+ S + + + I Sbjct 12 LGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTA 71 Query 61 RTREVLGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGL 120 R V+G+KG + +L +V G P ++ V L A A+S+ +L + + Sbjct 72 RPGIVIGKKGEDVEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRV 128 Query 121 AVRRACYGVLRHIMESGAKGCEVVVSGKL-RAQRAKSMKFRDGYIISTGEPRQRF---VS 176 RRA +++ M GAKG +V VSG+L A+ A++ +R+G + P + Sbjct 129 MFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADID 183 Query 177 QAIRSVQLRQGVLGVRVSIM 196 GV+GV+V I Sbjct 184 YNTSEAHTTYGVIGVKVWIF 203 > ath:ArthCp061 rps3; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Length=218 Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query 39 DGYSGVEVRVTPIRTEIIIRATRTREVLGEKGRRIRELTSLVQKRFGFPPDSVELFAERV 98 +G + +E++ +III + ++ +K RR+ EL VQK + + R+ Sbjct 58 EGIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRI 117 Query 99 ENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMK 158 N AE + +L ++ R+A + ++ KG +V ++G++ + ++ Sbjct 118 SNPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVE 177 Query 159 F-RDGYI-ISTGEPRQRFVSQAIRSVQLRQGVLGVRVSIML 197 + R+G + + T E + + S +R++ GVLG+++ I + Sbjct 178 WIREGRVPLQTIEAKIDYCSYTVRTI---YGVLGIKIWIFV 215 > hsa:22995 CEP152, FLJ21594, KIAA0912, MCPH4; centrosomal protein 152kDa Length=1710 Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%) Query 72 RIRELTSLVQKRFGFPPDSVELFAERVENRGL-CAMAQAESLRYKLLKGLAVRRACYGVL 130 ++ EL +L + PP S L A +EN L C+ E LR + +K AV++ +L Sbjct 1231 KLEELQTLCKT----PPRS--LSAGAIENACLPCSGGALEELRGQYIK--AVKKIKCDML 1282 Query 131 RHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYII 165 R+I ES + E+V + LR ++ + K R Y+I Sbjct 1283 RYIQESKERAAEMVKAEVLRERQETARKMRKYYLI 1317 > mmu:70902 Lpcat2b, 4921521K07Rik, Aytl1b; lysophosphatidylcholine acyltransferase 2B Length=516 Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Query 43 GVEVRVTPIRTEIIIRATRTREVLGEKGRRI-RELTSLVQKRFGFPPDSVELFAERVENR 101 G+ V P TE I++ + L E G RELT+++Q FG P V +++ + Sbjct 415 GLTVLCNPSNTEKILQMSFKLFDLDEDGYVTERELTTMLQAAFGVPDLDVSTLFQQMAGK 474 Query 102 GLCAMAQAESLRYKLLKGLAVRRACYGVLRH 132 ++ + Y+ + A++ Y L H Sbjct 475 ------DSDQVSYRTFRRFALKHPAYAKLFH 499 > mmu:17755 Mtap1b, A230055D22, AI843217, LC1, MAP1B, MAP5, MGC169657, MGC169658, Mtap-5, Mtap5; microtubule-associated protein 1B; K10429 microtubule-associated protein 1 Length=2464 Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 21/136 (15%) Query 12 ISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLG---E 68 I K K DG + E+ E +RT E GYS EI + TRT EV G E Sbjct 1922 IEKTIKTPEDGGYTCEITEKTTRTPEEGGYS----------YEISEKTTRTPEVSGYTYE 1971 Query 69 KGRRIRELTSLVQKRFGFPPDSVELFAE----RVENRGLCAMAQAESLRY----KLLKGL 120 K R R L + + D + + + ++ES Y K + Sbjct 1972 KTERSRRLLDDISNGYDDTEDGGHTLGDCSYSYETTEKITSFPESESYSYETSTKTTRSP 2031 Query 121 AVRRACYGVLRHIMES 136 CY + I ++ Sbjct 2032 DTSAYCYETMEKITKT 2047 > xla:495686 usp47; ubiquitin specific peptidase 47; K11857 ubiquitin carboxyl-terminal hydrolase 47 [EC:3.1.2.15] Length=1350 Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query 44 VEVRVTPIRTEIIIRATRTREVLGEKGRRIRELTSLVQKRFGFPPDSVELFAERVEN 100 V+V V ++TE + R L + I E L+ K PPDS+ + ER N Sbjct 700 VKVYVVDLKTETVASPVSVRAYLSQT---IIEFKQLISKSVDLPPDSMRVILERCYN 753 > mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152 Length=1736 Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query 104 CAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGY 163 C+ E LR + +K AVR+ +LR+I ES + E+V + LR ++ + K R+ Y Sbjct 1294 CSRQALEELRGQYIK--AVRKIKRDMLRYIQESKERAAEMVKAEVLRERQETARKMRNYY 1351 Query 164 I 164 + Sbjct 1352 L 1352 > tgo:TGME49_118610 hypothetical protein Length=1369 Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 12/72 (16%) Query 48 VTPIRTEIIIRATRTREVLGEKGRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMA 107 V P RTE I R T V+ E+ R + L +L K F P V ++G C Sbjct 1206 VAPDRTECITRGTGDENVISERERVLNVLQNL--KEFALP----------VASKGKCQKI 1253 Query 108 QAESLRYKLLKG 119 Q S L+ G Sbjct 1254 QCASQSLVLIAG 1265 > sce:YCR014C POL4; DNA polymerase IV, undergoes pair-wise interactions with Dnl4p-Lif1p and Rad27p to mediate repair of DNA double-strand breaks by non-homologous end joining (NHEJ); homologous to mammalian DNA polymerase beta (EC:2.7.7.7); K10981 DNA polymerase IV [EC:2.7.7.7] Length=582 Score = 29.6 bits (65), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query 18 FVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEI----IIRATRTREVLGEKGRRI 73 F ND A++ E L L +DGY +++TP ++ I+ RT +++G G R Sbjct 376 FCNDTTELAKIMETLCIKLYKDGYIHCFLQLTPNLEKLFLKRIVERFRTAKIVG-YGERK 434 Query 74 RELTSLVQKRF 84 R +S + K+F Sbjct 435 RWYSSEIIKKF 445 Lambda K H 0.320 0.137 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 8274230796 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40