bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0974_orf1 Length=247 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_094620 eukaryotic translation initiation factor 3 s... 227 3e-59 pfa:PFL0310c eukaryotic translation initiation factor 3 subuni... 197 2e-50 bbo:BBOV_III008380 17.m07733; eukaryotic translation initiatio... 179 6e-45 tpv:TP04_0739 eukaryotic translation initiation factor 3 subun... 178 1e-44 dre:334234 eif3c, eif3s8, fi37c04, wu:fb34a08, wu:fi37c04, zgc... 129 1e-29 hsa:8663 EIF3C, EIF3CL, EIF3S8, FLJ53378, FLJ54400, FLJ54404, ... 125 2e-28 hsa:728689 EIF3CL; eukaryotic translation initiation factor 3,... 125 2e-28 mmu:56347 Eif3c, 110kDa, 3230401O13Rik, Eif3s8, MGC36637, NIPI... 125 2e-28 ath:AT3G56150 EIF3C; EIF3C (EUKARYOTIC TRANSLATION INITIATION ... 124 4e-28 cpv:cgd4_3770 hypothetical protein ; K03252 translation initia... 122 1e-27 xla:100191027 eif3c, MGC114671, eif3-p110, eif3s8; eukaryotic ... 120 3e-27 ath:AT3G22860 TIF3C2; TIF3C2; translation initiation factor; K... 116 6e-26 cel:T23D8.4 eif-3.C; Eukaryotic Initiation Factor family membe... 114 3e-25 sce:YMR309C NIP1; Nip1p; K03252 translation initiation factor ... 73.9 5e-13 cel:K07H8.10 hypothetical protein; K11294 nucleolin 38.5 0.025 hsa:1293 COL6A3, DKFZp686D23123, DKFZp686K04147, DKFZp686N0262... 32.0 2.2 hsa:1278 COL1A2, OI4; collagen, type I, alpha 2; K06236 collag... 31.6 3.0 > tgo:TGME49_094620 eukaryotic translation initiation factor 3 subunit 8, putative ; K03252 translation initiation factor 3 subunit C Length=1104 Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/145 (75%), Positives = 122/145 (84%), Gaps = 0/145 (0%) Query 1 TVMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLY 60 TVMAATKALQ+GDW +C R I+SL IW+K+ N IQ+ML K+K EAMRTYIFTYL+LY Sbjct 734 TVMAATKALQKGDWKECCRFIFSLGIWEKLMNATEIQEMLKLKVKQEAMRTYIFTYLTLY 793 Query 61 DSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTL 120 DSF+I QL MF+L + VHSIVSKMMINEEIHASWDE+SQFILISRV+ TRLQQLA TL Sbjct 794 DSFSISQLCGMFELPESTVHSIVSKMMINEEIHASWDESSQFILISRVERTRLQQLASTL 853 Query 121 AENVANAVEQNELTLNMKNPKFALT 145 ENV NAVEQNELTLNMKNPK A T Sbjct 854 TENVNNAVEQNELTLNMKNPKCAAT 878 > pfa:PFL0310c eukaryotic translation initiation factor 3 subunit 8, putative; K03252 translation initiation factor 3 subunit C Length=984 Score = 197 bits (502), Expect = 2e-50, Method: Composition-based stats. Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 0/158 (0%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLYD 61 ++ ATK LQ+G+W C I+SLSIW K +KE +Q +L +KIK EAMRTYIF Y+S+Y+ Sbjct 790 IILATKHLQKGNWKLCCEKIFSLSIWPKFPDKEKVQNILKEKIKQEAMRTYIFRYISIYE 849 Query 62 SFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTLA 121 SF+I QL MFDL+ N VHSI+SKMMIN+EI A W+E+S+FILIS+V T LQ LAL LA Sbjct 850 SFSIDQLCVMFDLNQNVVHSILSKMMINQEIPAFWNESSKFILISKVNPTTLQNLALKLA 909 Query 122 ENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGW 159 ENV +EQNEL LNMKNPKF ERR +++ W Sbjct 910 ENVNEVMEQNELALNMKNPKFMFMQERRTQMKEEKSNW 947 > bbo:BBOV_III008380 17.m07733; eukaryotic translation initiation factor 3 subunit 8; K03252 translation initiation factor 3 subunit C Length=966 Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 88/189 (46%), Positives = 131/189 (69%), Gaps = 6/189 (3%) Query 1 TVMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLY 60 VM+ + LQ G+W +C + L+IW+++ ++E + Q+L +IK EA TYIF Y+ +Y Sbjct 780 VVMSTFRHLQNGNWKECYDLLAGLTIWNRLPDREEVLQILKDRIKVEAFNTYIFKYVPVY 839 Query 61 DSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTL 120 DSF++ QL+SMFDL N +HS++SKM+I +IHA+WD++S++ LI+ + T LQ+ A+ L Sbjct 840 DSFSVDQLSSMFDLDNNVIHSLLSKMIITGDIHATWDDSSKYCLINHTEPTDLQKCAIKL 899 Query 121 AENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDGGGHRSRPGF-RGR 179 AEN+ AVEQNE+TLNMKNPKFAL+ +RRF ++ +G R R+D H + P F R R Sbjct 900 AENLTTAVEQNEMTLNMKNPKFALSQDRRFQTRENKFSYG-RSRDD--RHHAAPTFNRNR 956 Query 180 AGLNPVGAR 188 + GAR Sbjct 957 RPIQ--GAR 963 > tpv:TP04_0739 eukaryotic translation initiation factor 3 subunit 8; K03252 translation initiation factor 3 subunit C Length=951 Score = 178 bits (452), Expect = 1e-44, Method: Composition-based stats. Identities = 85/166 (51%), Positives = 118/166 (71%), Gaps = 1/166 (0%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLYD 61 ++ A K LQ GDW C I SL+ W+ M ++E +Q+ L + IK E RTYIF Y+++YD Sbjct 759 ILNAFKHLQNGDWKQCFNFILSLNTWNNMPDREKVQETLKELIKVEGFRTYIFKYVNIYD 818 Query 62 SFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTLA 121 SF++ QL+SMF L N VHS++SKM++N EI SWD +S+ LI+ + T LQ+LA+ LA Sbjct 819 SFSVEQLSSMFSLDENVVHSLISKMIVNGEILGSWDYSSKCCLINHSEPTELQKLAVKLA 878 Query 122 ENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDG 167 EN++ AVEQNELTLNMKN KFAL+ +RRF + R +G+R +DG Sbjct 879 ENLSTAVEQNELTLNMKNSKFALSQDRRFQQRDTRYSYGSR-HDDG 923 > dre:334234 eif3c, eif3s8, fi37c04, wu:fb34a08, wu:fi37c04, zgc:66128; eukaryotic translation initiation factor 3, subunit C; K03252 translation initiation factor 3 subunit C Length=926 Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 20/180 (11%) Query 2 VMAATKALQRGDWSDCARHI----WSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA++ GDW C I + +WD + +++ML++KI+ E++RTY+FTY Sbjct 736 VVAASKAMKMGDWRTCHSFIINEKMNSKVWDLFPEAKCVREMLVRKIQEESLRTYLFTYS 795 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 S+YDS ++ L+ MF+L L VHSI+SKM+INEE+ AS D+ +Q +++ R + T LQ +A Sbjct 796 SVYDSISMETLSEMFELELPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPTSLQNMA 855 Query 118 LTLAENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDGGGHRSRPGFR 177 L LAE + VE NE ++K G G+ RD++ GG++ + G++ Sbjct 856 LQLAEKLGGLVENNERVFDLKQ--------------GVYGGYFNRDQK--GGYQQKQGYQ 899 > hsa:8663 EIF3C, EIF3CL, EIF3S8, FLJ53378, FLJ54400, FLJ54404, FLJ55450, FLJ55750, FLJ78287, MGC189737, MGC189744, eIF3-p110; eukaryotic translation initiation factor 3, subunit C; K03252 translation initiation factor 3 subunit C Length=913 Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 21/184 (11%) Query 2 VMAATKALQRGDWSDCARHIWSLS----IWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA++ GDW C I + +WD + ++ ML++KI+ E++RTY+FTY Sbjct 737 VVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTMLVRKIQEESLRTYLFTYS 796 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 S+YDS ++ L+ MF+L L VHSI+SKM+INEE+ AS D+ +Q +++ R + T Q LA Sbjct 797 SVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPTAQQNLA 856 Query 118 LTLAENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDGGGHRSRPGFR 177 L LAE + + VE NE + K G G+ RD++D G+R G+ Sbjct 857 LQLAEKLGSLVENNERVFDHKQ--------------GTYGGY-FRDQKD--GYRKNEGYM 899 Query 178 GRAG 181 R G Sbjct 900 RRGG 903 > hsa:728689 EIF3CL; eukaryotic translation initiation factor 3, subunit C-like Length=914 Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 21/184 (11%) Query 2 VMAATKALQRGDWSDCARHIWSLS----IWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA++ GDW C I + +WD + ++ ML++KI+ E++RTY+FTY Sbjct 738 VVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTMLVRKIQEESLRTYLFTYS 797 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 S+YDS ++ L+ MF+L L VHSI+SKM+INEE+ AS D+ +Q +++ R + T Q LA Sbjct 798 SVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPTAQQNLA 857 Query 118 LTLAENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDGGGHRSRPGFR 177 L LAE + + VE NE + K G G+ RD++D G+R G+ Sbjct 858 LQLAEKLGSLVENNERVFDHKQ--------------GTYGGY-FRDQKD--GYRKNEGYM 900 Query 178 GRAG 181 R G Sbjct 901 RRGG 904 > mmu:56347 Eif3c, 110kDa, 3230401O13Rik, Eif3s8, MGC36637, NIPIL(A3), NipilA3; eukaryotic translation initiation factor 3, subunit C; K03252 translation initiation factor 3 subunit C Length=911 Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 21/184 (11%) Query 2 VMAATKALQRGDWSDCARHIWSLS----IWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA++ GDW C I + +WD + ++ ML++KI+ E++RTY+FTY Sbjct 735 VVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTMLVRKIQEESLRTYLFTYS 794 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 S+YDS ++ L+ MF+L L VHSI+SKM+INEE+ AS D+ +Q +++ R + T Q LA Sbjct 795 SVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPTAQQNLA 854 Query 118 LTLAENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGWGTRDREDGGGHRSRPGFR 177 L LAE + + VE NE + K G G+ RD++D G+R G+ Sbjct 855 LQLAEKLGSLVENNERVFDHKQ--------------GTYGGY-FRDQKD--GYRKNEGYM 897 Query 178 GRAG 181 R G Sbjct 898 RRGG 901 > ath:AT3G56150 EIF3C; EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C); translation initiation factor; K03252 translation initiation factor 3 subunit C Length=900 Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 91/131 (69%), Gaps = 0/131 (0%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLYD 61 VMAAT+AL +GD+ + SL +W + N++ I M+ +IK EA+RTY+FTY S Y+ Sbjct 668 VMAATRALTKGDFQKAFEVLNSLEVWRLLKNRDSILDMVKDRIKEEALRTYLFTYSSSYE 727 Query 62 SFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTLA 121 S ++ QLA MFD+S VHSIVSKMMINEE+HASWD+ ++ I+ V+H+RLQ LA L Sbjct 728 SLSLDQLAKMFDVSEPQVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAFQLT 787 Query 122 ENVANAVEQNE 132 E ++ E NE Sbjct 788 EKLSILAESNE 798 > cpv:cgd4_3770 hypothetical protein ; K03252 translation initiation factor 3 subunit C Length=1040 Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 25/222 (11%) Query 1 TVMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQM---LLQKIKAEAMRTYIFTYL 57 T++AAT++LQ G W +C +++SLSIWD +N+E +QQ L IK EA+RTY+FTY Sbjct 807 TIIAATRSLQLGKWRECRDYVFSLSIWD--YNQEDLQQTQERLELNIKQEALRTYLFTYG 864 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 LY S+++ L MF L +HS++SKMM+ E+ A WD+T +F+L++ + +++Q + Sbjct 865 HLYSSYSVNNLIEMFQLPREKIHSLLSKMMLKNELQALWDQTGEFVLLNHKQASKIQNDS 924 Query 118 LTLAENVANAVEQNELTLNM-------KNPKFALTHERRFMRDGDRAGWGTRDREDGGGH 170 L +A+ + V+ NE ++ KNP + + + AG G + + G G Sbjct 925 LIVADKLLQFVDCNESMISSKGNASGGKNPN--------VINNRNSAGVGNPNNQGGIG- 975 Query 171 RSRPG-FRGRAGLNPVGARGRGLGRGTYRGCGFRGNRGSGDY 211 PG +G N G G ++ + SG Y Sbjct 976 ---PGSVQGGGPNNTSNTNSSGTGNQSFNSNYYSRKTNSGQY 1014 > xla:100191027 eif3c, MGC114671, eif3-p110, eif3s8; eukaryotic translation initiation factor 3, subunit C; K03252 translation initiation factor 3 subunit C Length=926 Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 4/141 (2%) Query 2 VMAATKALQRGDWSDCARHIWSLS----IWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA++ GDW C I + +WD E ++ ML++KI+ E++RTY+FTY Sbjct 739 VVAASKAMKMGDWKTCKNFIINEKMNGKVWDLFPEAERVRGMLVRKIQEESLRTYLFTYS 798 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 S+YDS +G L MF L + VHSI+SKM+INEE+ AS D+ +Q +++ + + LQ A Sbjct 799 SVYDSIRMGILGDMFQLEIPTVHSIISKMIINEELMASLDQPTQTVVMHGTEPSSLQNTA 858 Query 118 LTLAENVANAVEQNELTLNMK 138 L LAE + N VE NE + K Sbjct 859 LQLAEKLGNLVENNERIFDHK 879 > ath:AT3G22860 TIF3C2; TIF3C2; translation initiation factor; K03252 translation initiation factor 3 subunit C Length=805 Score = 116 bits (291), Expect = 6e-26, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 3/151 (1%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLS-LY 60 V+AAT+AL +G++ + + SL IW N++ I M+ I A+RTY+FTY S Y Sbjct 626 VIAATRALIKGNFQEAFSVLNSLDIWRLFKNRDSILDMVKASISEVALRTYLFTYSSSCY 685 Query 61 DSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTL 120 S ++ +LA MFD+S + V+SIVSKMMIN+E++A+WD+ +Q I+ V+H R Q LA + Sbjct 686 KSLSLAELAKMFDISESHVYSIVSKMMINKELNATWDQPTQCIVFHEVQHNRAQSLAFQI 745 Query 121 AENVANAVEQNELTLNMKNPKFAL--THERR 149 E +A E NE + K L T RR Sbjct 746 TEKLATLAESNESAMESKTGGVGLDMTSRRR 776 > cel:T23D8.4 eif-3.C; Eukaryotic Initiation Factor family member (eif-3.C); K03252 translation initiation factor 3 subunit C Length=898 Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 53/138 (38%), Positives = 91/138 (65%), Gaps = 4/138 (2%) Query 2 VMAATKALQRGDWSDCARHI----WSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYL 57 V+AA+KA+ GDW C +I + +W+ N E ++ M++++I+ E++RTY+ TY Sbjct 694 VVAASKAMLNGDWKKCQDYIVNDKMNQKVWNLFHNAETVKGMVVRRIQEESLRTYLLTYS 753 Query 58 SLYDSFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLA 117 ++Y + ++ +LA +F+LS VHSI+SKM+I EE+ A+ DE + +++ RV+ +RLQ LA Sbjct 754 TVYATVSLKKLADLFELSKKDVHSIISKMIIQEELSATLDEPTDCLIMHRVEPSRLQMLA 813 Query 118 LTLAENVANAVEQNELTL 135 L L++ + E NE L Sbjct 814 LNLSDKLQTLAENNEQIL 831 > sce:YMR309C NIP1; Nip1p; K03252 translation initiation factor 3 subunit C Length=812 Score = 73.9 bits (180), Expect = 5e-13, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 74/130 (56%), Gaps = 1/130 (0%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLYD 61 V+ A K++Q+G+W D +++ + W + N E + L ++++ E+++TY F++ Y Sbjct 675 VLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYS 734 Query 62 SFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASW-DETSQFILISRVKHTRLQQLALTL 120 SF++ +LA +FDL N V ++ ++ EI A DE + F++ + T+L++ + L Sbjct 735 SFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL 794 Query 121 AENVANAVEQ 130 + A E+ Sbjct 795 NKEYKIAKER 804 > cel:K07H8.10 hypothetical protein; K11294 nucleolin Length=798 Score = 38.5 bits (88), Expect = 0.025, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 15/96 (15%) Query 147 ERRFMRDGDRAGWGTRDREDGGGHRSRPGFRGRA-GLNPVGARGRGLGRGTYRGCGFRGN 205 +R R GDR G R + G +R R F G + G N RG G G T RG Sbjct 108 DRGNFRGGDRGGSPWRGGDRGVANRGRGDFSGGSRGGNKFSPRGGGRGGFTPRG------ 161 Query 206 RGSGDY-----RGDYCGESRGDLGEYRGYSDQRDPF 236 RG D+ RG++ +SRG G G+SD+R + Sbjct 162 RGGNDFSPRGGRGNF--QSRGG-GSRVGFSDKRKQY 194 > hsa:1293 COL6A3, DKFZp686D23123, DKFZp686K04147, DKFZp686N0262, FLJ34702, FLJ98399; collagen, type VI, alpha 3; K06238 collagen, type VI, alpha Length=3177 Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 13/71 (18%) Query 153 DGDRAGWGTRDREDGGGHRSRPGF------RGRAGLN----PVGARGRGLGRGTYRGCGF 202 D R G G+ R G R PG+ G GLN P G RGR RG G Sbjct 2295 DDGRDGVGSEGRRGKKGERGFPGYPGPKGNPGEPGLNGTTGPKGIRGR---RGNSGPPGI 2351 Query 203 RGNRGSGDYRG 213 G +G Y G Sbjct 2352 VGQKGDPGYPG 2362 > hsa:1278 COL1A2, OI4; collagen, type I, alpha 2; K06236 collagen, type I/II/III/V/XI, alpha Length=1366 Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query 152 RDGDRAGWGTRDREDGGGHRSRPGFRGRAGLNPVGARGRGLGRGTYRGCGFRGNRG 207 RDG+ G R+ GH+ G+ G G PVGA G G G GNRG Sbjct 926 RDGNPGNDGPPGRDGQPGHKGERGYPGNIG--PVGAAGAPGPHGPVGPAGKHGNRG 979 Lambda K H 0.321 0.136 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 8764825436 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40