bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0994_orf1
Length=165
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_038010 ribosomal protein L23a, putative ; K02893 la... 157 1e-38
xla:447121 rpl23a, MGC85348; ribosomal protein L23a; K02893 la... 135 9e-32
ath:AT3G55280 RPL23AB (RIBOSOMAL PROTEIN L23AB); RNA binding /... 133 3e-31
mmu:268449 Rpl23a, BC029892, MDA20, MGC107550, MGC107551, MGC3... 131 1e-30
mmu:100043755 Gm10132; predicted gene 10132; K02893 large subu... 131 1e-30
hsa:6147 RPL23A, FLJ27455, MDA20; ribosomal protein L23a; K028... 131 1e-30
pfa:PF13_0132 60S ribosomal protein L23a, putative; K02893 lar... 130 1e-30
dre:335539 rpl23a, MGC110139, wu:fa93f05, wu:fj20e05, zgc:1101... 130 2e-30
bbo:BBOV_III001580 17.m07161; 60S ribosomal protein L23; K0289... 130 2e-30
ath:AT2G39460 RPL23AA (RIBOSOMAL PROTEIN L23AA); RNA binding /... 129 4e-30
mmu:100039571 Gm10335; predicted gene 10335 129 4e-30
cel:F55D10.2 rpl-25.1; Ribosomal Protein, Large subunit family... 127 1e-29
mmu:100041478 Gm3362; predicted pseudogene 3362 127 2e-29
mmu:666501 Gm8137, EG666501; predicted gene 8137 125 7e-29
mmu:666738 Gm8264, EG666738; predicted gene 8264 125 7e-29
mmu:666790 Gm8290, EG666790; predicted gene 8290 122 5e-28
mmu:620750 Gm6177, EG620750; predicted gene 6177 121 9e-28
tpv:TP03_0683 60S ribosomal protein L23a; K02893 large subunit... 121 1e-27
mmu:666548 Gm8158, EG666548; predicted gene 8158 120 2e-27
mmu:666448 Gm8112, EG666448; predicted gene 8112 120 2e-27
mmu:100503110 60S ribosomal protein L23a-like 120 3e-27
sce:YOL127W RPL25; Rpl25p; K02893 large subunit ribosomal prot... 119 3e-27
mmu:100042634 Gm3940; predicted gene 3940 117 1e-26
cel:F52B5.6 rpl-25.2; Ribosomal Protein, Large subunit family ... 117 2e-26
mmu:631470 Gm7065, EG631470; predicted gene 7065 114 1e-25
mmu:100502582 60S ribosomal protein L23a-like 114 1e-25
cpv:cgd8_650 60S ribosomal protein L23A ; K02893 large subunit... 108 9e-24
mmu:627004 Gm12770, OTTMUSG00000008386; predicted gene 12770 98.6
hsa:100510065 60S ribosomal protein L23a-like 97.8 1e-20
mmu:546954 Gm6003, EG546954; predicted gene 6003 86.3
mmu:384594 Gm5329, EG384594; predicted gene 5329 85.1
mmu:668411 Gm9156, EG668411; predicted gene 9156 83.2
mmu:270499 Gm5058, EG270499; predicted gene 5058 83.2
hsa:100288802 similar to hCG1776279 57.8 2e-08
hsa:100507801 60S ribosomal protein L25-like 57.8 2e-08
eco:b3318 rplW, ECK3305, JW3280; 50S ribosomal subunit protein... 36.6 0.044
ath:AT4G39880 ribosomal protein L23 family protein 32.0 0.84
mmu:78772 Hhipl2, 4930507C10Rik, AW208802; hedgehog interactin... 30.8 2.1
mmu:19661 Rbp3, Irbp, MGC102323, Rbp-3; retinol binding protei... 30.4 2.4
cel:Y38C1AA.2 csn-3; COP-9 SigNalosome subunit family member (... 29.3 6.3
cel:B0336.4 rgs-5; Regulator of G protein Signaling family mem... 28.9 7.2
tpv:TP04_0437 104 kDa antigen 28.5 9.3
> tgo:TGME49_038010 ribosomal protein L23a, putative ; K02893
large subunit ribosomal protein L23Ae
Length=326
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 97/141 (68%), Gaps = 0/141 (0%)
Query 25 QAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRNDKYR 84
Q K LK A+ R V F RP TL+K R PK R A L + DKY
Sbjct 186 QQAAKGLKASSSFKKARVRTNVHFFRPHTLRKSRQPKVVRRCYEAATCTFPKLAKTDKYT 245
Query 85 VLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKK 144
+++ P+TTESAMKKIEETNTLVFL DPR++KR+IK+AVKE Y V QRVNTLIR DG KK
Sbjct 246 IVRQPLTTESAMKKIEETNTLVFLVDPRSNKRQIKQAVKELYDVDTQRVNTLIRPDGLKK 305
Query 145 AYVRLTPEFDALDVANKIGII 165
AYVRLT ++DALDVANKIGII
Sbjct 306 AYVRLTSDYDALDVANKIGII 326
> xla:447121 rpl23a, MGC85348; ribosomal protein L23a; K02893
large subunit ribosomal protein L23Ae
Length=155
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 92/127 (72%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFRRPKTLRLRRQPKYPRKS---------APTRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + Q+VNTLIR DG+KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKQLYDIDVQKVNTLIRPDGEKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> ath:AT3G55280 RPL23AB (RIBOSOMAL PROTEIN L23AB); RNA binding
/ nucleotide binding / structural constituent of ribosome;
K02893 large subunit ribosomal protein L23Ae
Length=154
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 101/140 (72%), Gaps = 15/140 (10%)
Query 28 GKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRV 85
G+ +KKP + K R V F RP+TL PR PK P+ I+A RN D Y++
Sbjct 28 GQIVKKPAK----KIRTKVTFHRPKTLTVPRKPKYPK---------ISATPRNKLDHYQI 74
Query 86 LQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKA 145
L++P+TTESAMKKIE+ NTLVF+ D RA K++IK+AVK+ Y + ++VNTLIR DG KKA
Sbjct 75 LKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKA 134
Query 146 YVRLTPEFDALDVANKIGII 165
YVRLTP++DALDVANKIGII
Sbjct 135 YVRLTPDYDALDVANKIGII 154
> mmu:268449 Rpl23a, BC029892, MDA20, MGC107550, MGC107551, MGC36820;
ribosomal protein L23A; K02893 large subunit ribosomal
protein L23Ae
Length=156
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 39 KIRTSPTFRRPKTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 89
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 90 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 149
Query 159 ANKIGII 165
ANKIGII
Sbjct 150 ANKIGII 156
> mmu:100043755 Gm10132; predicted gene 10132; K02893 large subunit
ribosomal protein L23Ae
Length=156
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 39 KIRTSPTFRRPKTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 89
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 90 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 149
Query 159 ANKIGII 165
ANKIGII
Sbjct 150 ANKIGII 156
> hsa:6147 RPL23A, FLJ27455, MDA20; ribosomal protein L23a; K02893
large subunit ribosomal protein L23Ae
Length=156
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 39 KIRTSPTFRRPKTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 89
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 90 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 149
Query 159 ANKIGII 165
ANKIGII
Sbjct 150 ANKIGII 156
> pfa:PF13_0132 60S ribosomal protein L23a, putative; K02893 large
subunit ribosomal protein L23Ae
Length=190
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 88/121 (72%), Gaps = 6/121 (4%)
Query 45 TVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIEETNT 104
++RF++P+TL R PK PR+ + + + DKY ++++P+T+E AMKKIEE NT
Sbjct 76 SIRFKKPKTLIYARNPKCPRIVKSCHSKTL------DKYGLIKYPLTSEKAMKKIEEINT 129
Query 105 LVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIGI 164
LVF+CD RA+K+ IK++VK +G+ +VN L ++G KKAYVRL+ E DAL+VANKIGI
Sbjct 130 LVFMCDKRANKKNIKKSVKNLFGIECDKVNVLNTLNGDKKAYVRLSGEHDALEVANKIGI 189
Query 165 I 165
+
Sbjct 190 L 190
> dre:335539 rpl23a, MGC110139, wu:fa93f05, wu:fj20e05, zgc:110139;
ribosomal protein L23a; K02893 large subunit ribosomal
protein L23Ae
Length=155
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 90/127 (70%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R T F RP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTTPTFHRPKTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKHAVKKPYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> bbo:BBOV_III001580 17.m07161; 60S ribosomal protein L23; K02893
large subunit ribosomal protein L23Ae
Length=154
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 6/152 (3%)
Query 14 KAAVEKKVKKAQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANP 73
KAA KVK+A+ ++KK K R F R RTL P++PK R L A+
Sbjct 9 KAADADKVKQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKR--HLITAHS 66
Query 74 IAALQRNDKYRVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRV 133
++ DK+ ++++P+TTE +MK IEE NTLVF+ D RA+K +I +AV E Y V RV
Sbjct 67 ----KKLDKFSIIKYPLTTEKSMKMIEEINTLVFIVDSRANKEKIAKAVSELYDVKCVRV 122
Query 134 NTLIRVDGKKKAYVRLTPEFDALDVANKIGII 165
NTL R DG KKAYVRL+P+ DALDVANKIGII
Sbjct 123 NTLNRPDGLKKAYVRLSPDQDALDVANKIGII 154
> ath:AT2G39460 RPL23AA (RIBOSOMAL PROTEIN L23AA); RNA binding
/ nucleotide binding / structural constituent of ribosome;
K02893 large subunit ribosomal protein L23Ae
Length=154
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 93/122 (76%), Gaps = 11/122 (9%)
Query 46 VRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKKIEETN 103
V F RP+TL KPRT K P+ I+A RN D Y++L++P+TTESAMKKIE+ N
Sbjct 42 VTFHRPKTLTKPRTGKYPK---------ISATPRNKLDHYQILKYPLTTESAMKKIEDNN 92
Query 104 TLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIG 163
TLVF+ D RA K++IK+AVK+ Y + ++VNTLIR DG KKAYVRLTP++DALDVANKIG
Sbjct 93 TLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 152
Query 164 II 165
II
Sbjct 153 II 154
> mmu:100039571 Gm10335; predicted gene 10335
Length=156
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 91/127 (71%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+T ESAMKK
Sbjct 39 KIRTSPTFRRPKTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTMESAMKK 89
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 90 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 149
Query 159 ANKIGII 165
ANKIGII
Sbjct 150 ANKIGII 156
> cel:F55D10.2 rpl-25.1; Ribosomal Protein, Large subunit family
member (rpl-25.1); K02893 large subunit ribosomal protein
L23Ae
Length=147
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 103/164 (62%), Gaps = 17/164 (10%)
Query 2 MAPKEKAPAKGSKAAVEKKVKKAQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPK 61
MAP APAK +KA KK K +K T + R +V FRRP TLK R +
Sbjct 1 MAPS--APAKTAKALDAKK--------KVVKGKRTTHRRQVRTSVHFRRPVTLKTARQAR 50
Query 62 APRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEA 121
PR + P + + D +R++QHP+TTESAMKKIEE NTLVF+ A+K +IK+A
Sbjct 51 FPR-----KSAPKTS--KMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDA 103
Query 122 VKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIGII 165
V + Y V A +VNTLI +KKAYVRLT ++DALDVANKIG+I
Sbjct 104 VHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
> mmu:100041478 Gm3362; predicted pseudogene 3362
Length=156
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 89/125 (71%), Gaps = 7/125 (5%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIE 100
K R + FR P+TL+ R PK PR + + + D Y +++ P+TTESAMKKIE
Sbjct 39 KIRTSPTFRWPKTLQLRRQPKYPRKS-------VPRRNKLDHYAIIKFPLTTESAMKKIE 91
Query 101 ETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVAN 160
+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKAYVRL P++DALDVAN
Sbjct 92 DNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVAN 151
Query 161 KIGII 165
KIGII
Sbjct 152 KIGII 156
> mmu:666501 Gm8137, EG666501; predicted gene 8137
Length=155
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFRRPKTLQLWRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR + +KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPNREKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> mmu:666738 Gm8264, EG666738; predicted gene 8264
Length=155
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFRRPKTLQLWRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR + +KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPNREKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> mmu:666790 Gm8290, EG666790; predicted gene 8290
Length=155
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 90/127 (70%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK P+ + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFRRPKTLQLRRQPKYPQKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +VNTLIR DG+KKA V L P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKADVCLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> mmu:620750 Gm6177, EG620750; predicted gene 6177
Length=154
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 89/127 (70%), Gaps = 12/127 (9%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK P W P +RN D Y ++ P+TTESAMKK
Sbjct 38 KIRMSPTFRRPKTLRFRRQPKYP-----WKCAP----RRNKLDHYAIINFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+A+K+ + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 89 IED-NTLVFIVDVKANKHQIKQAIKKLCDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 147
Query 159 ANKIGII 165
A+KIGII
Sbjct 148 ASKIGII 154
> tpv:TP03_0683 60S ribosomal protein L23a; K02893 large subunit
ribosomal protein L23Ae
Length=152
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 96/146 (65%), Gaps = 6/146 (4%)
Query 20 KVKKAQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQR 79
K +KA+ +++KK K R F R RTL RTPK + + A ++
Sbjct 13 KTRKAKLASRSVKKSTSVKKVKTRRNTHFFRGRTLSLKRTPKYEKKVK------TAYTKK 66
Query 80 NDKYRVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRV 139
DK+ ++++P+TTESAMK IEE NTLVF+ DPRA+K ++ +AV + Y + VNTLIR
Sbjct 67 LDKFSIVRYPLTTESAMKMIEELNTLVFVVDPRANKAKVAKAVSQLYDITPVHVNTLIRP 126
Query 140 DGKKKAYVRLTPEFDALDVANKIGII 165
DG+KKA+VRL+P+ DALDVANKIGII
Sbjct 127 DGQKKAFVRLSPDQDALDVANKIGII 152
> mmu:666548 Gm8158, EG666548; predicted gene 8158
Length=155
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 90/127 (70%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + F+RP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFQRPKTLQLWRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +V TLIR + +KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVYTLIRPNREKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> mmu:666448 Gm8112, EG666448; predicted gene 8112
Length=155
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 90/127 (70%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + F+RP+TL+ R PK PR + A +RN D Y +++ P+TTESAMKK
Sbjct 38 KIRTSPTFQRPKTLQLWRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y + +V TLIR + +KKAYVRL P++DALDV
Sbjct 89 IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVYTLIRPNREKKAYVRLAPDYDALDV 148
Query 159 ANKIGII 165
ANKIGII
Sbjct 149 ANKIGII 155
> mmu:100503110 60S ribosomal protein L23a-like
Length=154
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 89/127 (70%), Gaps = 12/127 (9%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + FRRP+TL+ R PK PR A +RN D Y ++ P+TTESAMKK
Sbjct 38 KIRMSPTFRRPKTLRFRRQPKYPRKC---------APRRNKLDHYAIINFPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+A+K+ + +VNTLIR DG+KKAYVRL P++DALDV
Sbjct 89 IED-NTLVFIVDVKANKHQIKQAIKKLCDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 147
Query 159 ANKIGII 165
A+KIGII
Sbjct 148 ASKIGII 154
> sce:YOL127W RPL25; Rpl25p; K02893 large subunit ribosomal protein
L23Ae
Length=142
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 85/125 (68%), Gaps = 7/125 (5%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIE 100
K R + FR P+TLK R PK +A+ + R D Y+V++ P+T+E+AMKK+E
Sbjct 25 KVRTSATFRLPKTLKLARAPK-------YASKAVPHYNRLDSYKVIEQPITSETAMKKVE 77
Query 101 ETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVAN 160
+ N LVF +A+K +IK+AVKE Y V +VNTL+R +G KKAYVRLT ++DALD+AN
Sbjct 78 DGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIAN 137
Query 161 KIGII 165
+IG I
Sbjct 138 RIGYI 142
> mmu:100042634 Gm3940; predicted gene 3940
Length=143
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 11/116 (9%)
Query 52 RTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKKIEETNTLVFLC 109
+TL+ R PK PR + A +RN D Y +++ P+TTESAMKKIE+ NTLVF+
Sbjct 37 KTLRLRRQPKYPRKS---------APRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV 87
Query 110 DPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIGII 165
D +A+K +IK+AVK+ Y + +VNTLIR D +KKAYVRL P++DALDVANKIGII
Sbjct 88 DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDREKKAYVRLAPDYDALDVANKIGII 143
> cel:F52B5.6 rpl-25.2; Ribosomal Protein, Large subunit family
member (rpl-25.2); K02893 large subunit ribosomal protein
L23Ae
Length=146
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 93/149 (62%), Gaps = 8/149 (5%)
Query 18 EKKVKKAQAVGKALKKPGRTATAK-ARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAA 76
KV KA KA+ K +T K R +V FRRP+TL T +APR AR A A
Sbjct 5 SNKVGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTL---VTARAPRYARKSAP----A 57
Query 77 LQRNDKYRVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTL 136
+ D + V++ P TTES+MKKIE+ NTLVF+ D +A+K IK AV Y V A +VNTL
Sbjct 58 RDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTL 117
Query 137 IRVDGKKKAYVRLTPEFDALDVANKIGII 165
I +KKAYVRL ++DALDVANKIG I
Sbjct 118 ITPLQQKKAYVRLASDYDALDVANKIGFI 146
> mmu:631470 Gm7065, EG631470; predicted gene 7065
Length=158
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 12/121 (9%)
Query 48 FRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKKIEETNTL 105
FR P+TL+ R PK P+ + A +RN D Y +++ P+TTESAM KIE+ NTL
Sbjct 47 FRWPKTLRLRRQPKYPQKS---------APRRNKLDHYAIIKFPLTTESAMTKIEDNNTL 97
Query 106 VFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDG-KKKAYVRLTPEFDALDVANKIGI 164
VF+ D + +K +IK+AVKE Y + +VNTLIR DG KKKA VRL P++DALDVA KIGI
Sbjct 98 VFIVDVKVNKHQIKQAVKELYDIDVAKVNTLIRPDGEKKKAXVRLAPDYDALDVAKKIGI 157
Query 165 I 165
I
Sbjct 158 I 158
> mmu:100502582 60S ribosomal protein L23a-like
Length=153
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + F RP+TL+ R PK PR A ++N D Y +++ P+TTESAMKK
Sbjct 36 KIRTSPTFWRPKTLRLRRQPKYPRKC---------APRKNKLDHYAIIKFPLTTESAMKK 86
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
IE+ NTLVF+ D +A+K +IK+AVK+ Y +VNTLIR DG+KKA V L ++DALDV
Sbjct 87 IEDNNTLVFIVDVKANKHQIKQAVKKLYDTDMAKVNTLIRPDGEKKADVCLALDYDALDV 146
Query 159 ANKIGII 165
ANKIGII
Sbjct 147 ANKIGII 153
> cpv:cgd8_650 60S ribosomal protein L23A ; K02893 large subunit
ribosomal protein L23Ae
Length=156
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 7/142 (4%)
Query 24 AQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRNDKY 83
A+ +A+K R++T K R V+F RP+TLK R PK R I + D Y
Sbjct 22 AKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYER-------KSIKTQKSLDCY 74
Query 84 RVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKK 143
+++ P+TTESAMK +E NT+VFL + RA+K +IK AV + Y V VNT+ K
Sbjct 75 DIIKRPITTESAMKMVETLNTIVFLVNERANKTQIKYAVNKLYDVKVANVNTVNTFGDGK 134
Query 144 KAYVRLTPEFDALDVANKIGII 165
KA+V+L+P+ +A+DVA++IGII
Sbjct 135 KAFVKLSPDVEAVDVASRIGII 156
> mmu:627004 Gm12770, OTTMUSG00000008386; predicted gene 12770
Length=248
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 12/133 (9%)
Query 35 GRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTT 92
G + K R + F +P++L R P+ P+ + P RN D Y V++ P+TT
Sbjct 126 GIHSHKKIRTSPTFWQPKSLWLQRKPQYPQ-----NSEP-----RNKLDHYVVIKLPLTT 175
Query 93 ESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPE 152
ESAMKKI+E + LVF+ D +A K +IKEA+K+ Y + +V+TL R D +KKAYV L P+
Sbjct 176 ESAMKKIKEYDMLVFIVDVKAIKHQIKEAMKKLYDIDVAKVHTLTRPDREKKAYVCLAPD 235
Query 153 FDALDVANKIGII 165
+DAL VANKI +I
Sbjct 236 YDALYVANKIWVI 248
> hsa:100510065 60S ribosomal protein L23a-like
Length=121
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 11/118 (9%)
Query 48 FRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKKIEETNTL 105
FRRP+TL+ R P+ P+ + P +RN Y +++ P+T ESA+KK EE NTL
Sbjct 5 FRRPKTLRLQRQPRYPQ-----KSTP----RRNKLGHYAIIKFPLTAESAVKKTEENNTL 55
Query 106 VFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIG 163
VF D +A K +I++AVK+ Y +V TLI D +KKAYVRL P++DALDVA K+G
Sbjct 56 VFTVDVKAKKHQIRQAVKKLYDSDVAKVTTLICPDKEKKAYVRLAPDYDALDVATKLG 113
> mmu:546954 Gm6003, EG546954; predicted gene 6003
Length=155
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 77/118 (65%), Gaps = 11/118 (9%)
Query 50 RPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKKIEETNTLVF 107
+P++L R PK P+ + P +RN D Y V++ +TT+SAMKKI++ N L F
Sbjct 47 KPKSLWLQRKPKYPQ-----NSEP----RRNKLDHYVVIKLQLTTKSAMKKIKDKNKLAF 97
Query 108 LCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIGII 165
+ D + +K +IK+A+K+ Y + + NTL R + +KKAYV L P++DALDVANKI +I
Sbjct 98 IVDVKTNKHQIKKAMKKLYDIDVTKANTLTRPNREKKAYVCLAPDYDALDVANKIRVI 155
> mmu:384594 Gm5329, EG384594; predicted gene 5329
Length=155
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query 33 KPGRTATAKARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPV 90
K ++ K R + F +P++L R PK L ++P +RN D Y V++ P+
Sbjct 30 KGNQSHKKKIRTSPTFWQPKSLWLQRKPKY-----LQNSDP----RRNKLDHYAVIKLPL 80
Query 91 TTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLT 150
TTESAMKKI++ N LVF+ D +A+K +IK+AV++ Y + +V+TL R D + K V L
Sbjct 81 TTESAMKKIKDNNMLVFIVDVKANKHQIKKAVRKLYDIDVAKVHTLTRPDRENKVCVYLA 140
Query 151 PEFDALDVANKIGII 165
P+ +A DV NKI +I
Sbjct 141 PDCEAPDVVNKIRVI 155
> mmu:668411 Gm9156, EG668411; predicted gene 9156
Length=155
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + F +P++L R PK L + P +RN D Y V++ P+TTESAMKK
Sbjct 38 KIRTSPIFWQPKSLWLQRKPKY-----LQNSEP----RRNKLDHYAVIKLPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
I++ N LVF+ D + +K +IK+AV++ Y + +V+TL R D + KA V L P+ +A DV
Sbjct 89 IKDNNMLVFIVDVKTNKHQIKKAVRKLYDIDVAKVHTLTRPDRENKACVYLAPDCEAPDV 148
Query 159 ANKIGII 165
NKI +I
Sbjct 149 VNKIRVI 155
> mmu:270499 Gm5058, EG270499; predicted gene 5058
Length=155
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query 41 KARYTVRFRRPRTLKKPRTPKAPRLARLWAANPIAALQRN--DKYRVLQHPVTTESAMKK 98
K R + F +P++L R PK L + P +RN D Y V++ P+TTESAMKK
Sbjct 38 KIRTSPIFWQPKSLWLQRKPKY-----LQNSEP----RRNKLDHYAVIKLPLTTESAMKK 88
Query 99 IEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDV 158
I++ N LVF+ D + +K +IK+AV++ Y + +V+TL R D + KA V L P+ +A DV
Sbjct 89 IKDNNMLVFIVDVKTNKHQIKKAVRKLYDIDVAKVHTLTRPDRENKACVYLAPDCEAPDV 148
Query 159 ANKIGII 165
NKI +I
Sbjct 149 VNKIRVI 155
> hsa:100288802 similar to hCG1776279
Length=133
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query 93 ESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPE 152
E+AMK E NTLVF D +A+K ++++A+KE + + +VNT +++ L P+
Sbjct 69 EAAMKT--EGNTLVFTVDVKANKHQMEQAMKEFHDICVAKVNT------EEEGMCPLAPD 120
Query 153 FDALDVANKIGII 165
ALDVANKIGII
Sbjct 121 DHALDVANKIGII 133
> hsa:100507801 60S ribosomal protein L25-like
Length=133
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query 93 ESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPE 152
E+AMK E NTLVF D +A+K ++++A+KE + + +VNT +++ L P+
Sbjct 69 EAAMKT--EGNTLVFTVDVKANKHQMEQAMKEFHDICVAKVNT------EEEGMCPLAPD 120
Query 153 FDALDVANKIGII 165
ALDVANKIGII
Sbjct 121 DHALDVANKIGII 133
> eco:b3318 rplW, ECK3305, JW3280; 50S ribosomal subunit protein
L23; K02892 large subunit ribosomal protein L23
Length=100
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 15/80 (18%)
Query 84 RVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGK- 142
+VL+ P +E A +E++NT+V A+K IK AV++ + V + VNTL+ V GK
Sbjct 9 KVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLV-VKGKV 67
Query 143 -------------KKAYVRL 149
KKAYV L
Sbjct 68 KRHGQRIGRRSDWKKAYVTL 87
> ath:AT4G39880 ribosomal protein L23 family protein
Length=178
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query 111 PRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKK 144
P ASK IK ++ YG ++VNTL +DGKKK
Sbjct 37 PSASKIEIKRVLESLYGFDVEKVNTL-NMDGKKK 69
> mmu:78772 Hhipl2, 4930507C10Rik, AW208802; hedgehog interacting
protein-like 2
Length=717
Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query 6 EKAPAKGSKAAVEKKVKKAQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAPRL 65
+KA K S A + + +LKKP + ++K FRRP T KK
Sbjct 639 QKAARKASNATFTSSSDRVASQKGSLKKPASSRSSKK----TFRRPGTKKK--------- 685
Query 66 ARLWAANP 73
+R+W+ P
Sbjct 686 SRVWSPRP 693
> mmu:19661 Rbp3, Irbp, MGC102323, Rbp-3; retinol binding protein
3, interstitial
Length=1234
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query 12 GSKAAVEKKVKK--------AQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPKAP 63
G +AA+E+ +K Q + + L +++ + R + + P TL+ P+ +AP
Sbjct 47 GMQAAIEQAMKSHEILGISDPQTLAQVLTAGVQSSLSDPRLFISYE-PSTLEAPQ--QAP 103
Query 64 RLARLWAANPIAALQRNDKYRVLQ 87
L L +A +QRN ++ VL+
Sbjct 104 VLTNLTREELLAQIQRNIRHEVLE 127
> cel:Y38C1AA.2 csn-3; COP-9 SigNalosome subunit family member
(csn-3); K12177 COP9 signalosome complex subunit 3
Length=501
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query 98 KIEETNTLVFLCDPRASKRRIKEAVKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALD 157
+I E L FL + ++ V E G + + +R+DG + L+P D
Sbjct 398 RISEIEELAFL--------KSRDQVTELIGQLVEEQRITVRIDGDMVFWTELSPVPSKND 449
Query 158 VANKIGII 165
V NKI I+
Sbjct 450 VENKIRIV 457
> cel:B0336.4 rgs-5; Regulator of G protein Signaling family member
(rgs-5)
Length=492
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 0/49 (0%)
Query 57 PRTPKAPRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIEETNTL 105
PRTP++ RLA + AL + + Q P+ +S ++K + NTL
Sbjct 408 PRTPRSSRLAEVDEMGRYHALYDDSHSQTPQKPMRIKSTLRKYLDKNTL 456
> tpv:TP04_0437 104 kDa antigen
Length=924
Score = 28.5 bits (62), Expect = 9.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query 7 KAPAKGSKAAVE-KKVKKAQAVGKALK-KPGR--TATAKARYTVRFRRPRTLKKPRTPKA 62
K P+KGS ++ E KK + G A + KP + T + K + PR K+PR K+
Sbjct 532 KGPSKGSDSSKEGKKPGSGKKPGPAREHKPSKIPTLSKKPSGPKDPKHPRDPKEPRKSKS 591
Query 63 PRLA 66
PR A
Sbjct 592 PRTA 595
Lambda K H
0.316 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3962792044
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40