bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_1008_orf1 Length=137 Score E Sequences producing significant alignments: (Bits) Value ath:AT1G49980 DNA-directed DNA polymerase/ damaged DNA binding... 89.0 4e-18 mmu:27015 Polk, Dinb1; polymerase (DNA directed), kappa (EC:2.... 77.4 1e-14 hsa:51426 POLK, DINB1, DINP, POLQ; polymerase (DNA directed) k... 76.3 3e-14 eco:b0231 dinB, dinP, ECK0232, JW0221; DNA polymerase IV (EC:2... 75.1 7e-14 xla:446387 polk, MGC83722; polymerase (DNA directed) kappa (EC... 73.6 2e-13 dre:562749 polk, si:ch211-254o18.3; polymerase (DNA directed) ... 73.6 2e-13 cel:F22B7.6 polk-1; POLK (DNA polymerase kappa) homolog family... 72.4 4e-13 ath:AT5G44750 REV1; REV1; DNA-directed DNA polymerase; K03515 ... 56.2 3e-08 mmu:80905 Polh, RAD30A, XPV; polymerase (DNA directed), eta (R... 55.8 4e-08 ath:AT5G44740 POLH; POLH (Y-FAMILT DNA POLYMERASE H); DNA-dire... 54.7 8e-08 hsa:5429 POLH, FLJ16395, FLJ21978, RAD30, RAD30A, XP-V, XPV; p... 54.3 1e-07 hsa:11201 POLI, RAD30B, RAD3OB; polymerase (DNA directed) iota... 51.6 7e-07 xla:431964 rev1, MGC83743; REV1 homolog; K03515 DNA repair pro... 48.5 7e-06 mmu:26447 Poli, Rad30b; polymerase (DNA directed), iota (EC:2.... 46.6 3e-05 tgo:TGME49_108880 DNA polymerase, putative (EC:2.7.7.7 3.2.1.91) 45.8 4e-05 dre:678520 MGC136881, fc50a12, wu:fc50a12, zgc:152642; zgc:136... 45.8 4e-05 dre:550532 wu:fc27h11; zgc:110185 (EC:2.7.7.7); K03510 DNA pol... 45.1 6e-05 dre:570043 si:dkey-57a22.7; K03515 DNA repair protein REV1 [EC... 44.7 8e-05 xla:446909 polh, MGC81702; polymerase (DNA directed), eta (EC:... 44.7 8e-05 mmu:56210 Rev1, 1110027I23Rik, AU022044, MGC66950, Rev1l; REV1... 44.7 1e-04 hsa:51455 REV1, FLJ21523, MGC163283, MGC26225, REV1L; REV1 hom... 43.5 2e-04 tgo:TGME49_037480 ImpB/MucB/SamB family domain-containing prot... 37.4 0.014 tgo:TGME49_057310 nuclear movement domain-containing protein 36.6 0.021 eco:b1184 umuC, ECK1172, JW1173, uvm; DNA polymerase V, subuni... 35.8 0.036 cpv:cgd4_3920 DinB/family X-type DNA polymerase ; K03509 DNA p... 35.4 0.048 cel:F53A3.2 polh-1; POLH (DNA polymerase eta) homolog family m... 33.9 0.14 ath:AT2G01440 ATP binding / ATP-dependent DNA helicase/ ATP-de... 33.9 0.17 cel:ZK675.2 rev-1; REV1 (translesion DNA polymerase) homolog f... 33.1 0.26 sce:YDR419W RAD30, DBH1; DNA polymerase eta, involved in tranl... 32.3 0.45 bbo:BBOV_I000470 16.m00783; ImpB/MucB/SamB family protein 29.6 2.9 eco:b0081 mraZ, ECK0082, JW0079, yabB; conserved protein, MraZ... 29.6 3.2 tgo:TGME49_064140 hypothetical protein 29.3 4.2 dre:565064 serpina10a, si:dkey-85n7.5; serpin peptidase inhibi... 28.9 5.0 mmu:232196 MGC25529; expressed sequence C87436 28.9 5.4 sce:YDL122W UBP1; Ubiquitin-specific protease that removes ubi... 28.1 8.5 tgo:TGME49_069620 hypothetical protein 28.1 9.3 > ath:AT1G49980 DNA-directed DNA polymerase/ damaged DNA binding; K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=671 Score = 89.0 bits (219), Expect = 4e-18, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 11/118 (9%) Query 17 CRRRVTA---LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATT 73 CR R + + E+R++V S TGL+CSAG A+R++AK+ SD+NKPNGQ +++ +T Sbjct 210 CRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRST- 268 Query 74 AAATAATAAFLDSLNVRKIPGVGKYREKML-NALGIHTCGELLQHAPLLLYLLPKITA 130 F+ L VRKI G+GK E +L +ALGI TC E++Q LL L + +A Sbjct 269 ------VMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSA 320 > mmu:27015 Polk, Dinb1; polymerase (DNA directed), kappa (EC:2.7.7.7); K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=852 Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats. Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 7/114 (6%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V EIR + T L+ SAG + ++AK+ SD NKPNGQ + + +A F Sbjct 292 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQI-------LPSRSAVMDF 344 Query 84 LDSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAPLLLYLLPKITAVHLIRMA 137 + L +RK+ G+GK EKML ALGI TC EL Q LL L + + + + +A Sbjct 345 IKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHIA 398 > hsa:51426 POLK, DINB1, DINP, POLQ; polymerase (DNA directed) kappa (EC:2.7.7.7); K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=870 Score = 76.3 bits (186), Expect = 3e-14, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 7/106 (6%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V EIR + T L+ SAG + ++AK+ SD NKPNGQ + A F Sbjct 293 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-------RQAVMDF 345 Query 84 LDSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAPLLLYLLPKIT 129 + L +RK+ G+GK EKML ALGI TC EL Q LL L + + Sbjct 346 IKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETS 391 > eco:b0231 dinB, dinP, ECK0232, JW0221; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Length=351 Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 9/98 (9%) Query 17 CRRRVTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAA 76 C T + EIR + + L+ SAG + +AKIASDMNKPNGQ ++ Sbjct 115 CHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVI---------T 165 Query 77 TAATAAFLDSLNVRKIPGVGKYREKMLNALGIHTCGEL 114 A AFL +L + KIPGVGK L A+G+ TCG++ Sbjct 166 PAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDV 203 > xla:446387 polk, MGC83722; polymerase (DNA directed) kappa (EC:2.7.7.7); K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=862 Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 7/117 (5%) Query 21 VTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAAT 80 V V E+R + T L+ SAG + ++AK+ SD NKPNGQ + A A Sbjct 288 VEEAVKEMRFRIEQKTTLTASAGIAPNMMLAKVCSDKNKPNGQYRI-------ANDRQAI 340 Query 81 AAFLDSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAPLLLYLLPKITAVHLIRMA 137 F+ L +RK+PG+GK EKML AL + TC +L Q LL L + + + + ++ Sbjct 341 KDFIKDLPIRKVPGIGKVTEKMLKALEVVTCTDLYQQRALLSLLFSETSWQNFVHIS 397 > dre:562749 polk, si:ch211-254o18.3; polymerase (DNA directed) kappa; K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=888 Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 7/113 (6%) Query 25 VSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFL 84 V E+R + T L+ SAG + ++AK+ SD NKPNGQ + F+ Sbjct 258 VREMRFRIEQKTSLTASAGIAPNMMLAKVCSDKNKPNGQYRI-------PPERQVVMDFM 310 Query 85 DSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAPLLLYLLPKITAVHLIRMA 137 L VRK+ GVGK EKML ALGI TC +L Q LL L + + H + ++ Sbjct 311 KDLPVRKVSGVGKVTEKMLAALGIVTCSQLGQQMALLSLLFSETSWHHFLHIS 363 > cel:F22B7.6 polk-1; POLK (DNA polymerase kappa) homolog family member (polk-1); K03511 DNA polymerase kappa subunit [EC:2.7.7.7] Length=596 Score = 72.4 bits (176), Expect = 4e-13, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 7/90 (7%) Query 25 VSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFL 84 V EIR V TGL+CSAG ++ ++AKI SD+NKPNGQ ++E A FL Sbjct 256 VREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLEND-------KNAIMEFL 308 Query 85 DSLNVRKIPGVGKYREKMLNALGIHTCGEL 114 L +RK+ G+G+ E L A+ I T G++ Sbjct 309 KDLPIRKVGGIGRVCEAQLKAMDIQTVGDM 338 > ath:AT5G44750 REV1; REV1; DNA-directed DNA polymerase; K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1105 Score = 56.2 bits (134), Expect = 3e-08, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 L S IR + TG S SAG G + ++A++A+ + KP GQ + A F Sbjct 493 LASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISA---------EKVEEF 543 Query 84 LDSLNVRKIPGVGKYREKMLNALGIHTCGEL 114 LD L V +PGVG ++ L I TCG+L Sbjct 544 LDQLPVGTLPGVGSVLKEKLVKQNIQTCGQL 574 > mmu:80905 Polh, RAD30A, XPV; polymerase (DNA directed), eta (RAD 30 related) (EC:2.7.7.7); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=694 Score = 55.8 bits (133), Expect = 4e-08, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V E+RAA+ S TG CSAG ++++AK+A +NKPN Q +V + + Sbjct 195 IVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLV---------SHGSVPQL 245 Query 84 LDSLNVRKIPGV-GKYREKMLNALGIHTCGELLQ 116 + +RKI + GK ++ LGI G+L Q Sbjct 246 FSQMPIRKIRSLGGKLGASVIEVLGIEYMGDLTQ 279 > ath:AT5G44740 POLH; POLH (Y-FAMILT DNA POLYMERASE H); DNA-directed DNA polymerase; K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=672 Score = 54.7 bits (130), Expect = 8e-08, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 10/94 (10%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V+E+R V T +CSAG ++++AK+AS MNKP Q +V AA Sbjct 191 IVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV---------PYAAVQEL 241 Query 84 LDSLNVRKIPGV-GKYREKMLNALGIHTCGELLQ 116 L SL ++K+ + GK + LG+ T G+LLQ Sbjct 242 LSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQ 275 > hsa:5429 POLH, FLJ16395, FLJ21978, RAD30, RAD30A, XP-V, XPV; polymerase (DNA directed), eta (EC:2.7.7.7); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=713 Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 10/94 (10%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V E+RAA+ TG CSAG ++++AK+A +NKPN Q +V + + Sbjct 196 IVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLV---------SHGSVPQL 246 Query 84 LDSLNVRKIPGV-GKYREKMLNALGIHTCGELLQ 116 + +RKI + GK ++ LGI GEL Q Sbjct 247 FSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQ 280 > hsa:11201 POLI, RAD30B, RAD3OB; polymerase (DNA directed) iota (EC:2.7.7.7); K03510 DNA polymerase iota subunit [EC:2.7.7.7] Length=740 Score = 51.6 bits (122), Expect = 7e-07, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 10/102 (9%) Query 22 TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATA 81 + + +E+R A+ + GL+ AG +++++AK+ S + KPN Q T + Sbjct 202 SQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQ---------TVLLPESCQ 252 Query 82 AFLDSLN-VRKIPGVGKYREKMLNALGIHTCGELLQHAPLLL 122 + SLN +++IPG+G K L ALGI++ +L +P +L Sbjct 253 HLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKIL 294 > xla:431964 rev1, MGC83743; REV1 homolog; K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1230 Score = 48.5 bits (114), Expect = 7e-06, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query 28 IRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFLDSL 87 IR + TG + S G G++ ++A++A+ KP+GQ ++ F+ Sbjct 582 IRTEIKEKTGCAASIGIGSNILLARMATRRAKPDGQYHLKPEEVDD---------FIRGQ 632 Query 88 NVRKIPGVGKYREKMLNALGIHTCGEL 114 V +PGVG+ + L++LG+ TCGEL Sbjct 633 LVNNLPGVGRTMDCKLSSLGVKTCGEL 659 > mmu:26447 Poli, Rad30b; polymerase (DNA directed), iota (EC:2.7.7.7); K03510 DNA polymerase iota subunit [EC:2.7.7.7] Length=737 Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 13/110 (11%) Query 9 QKVSVRRECRRRV---TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKI 65 Q V++ RR+ + + +E+R A+ + GL+ AG ++++AK+ S + KPN Q Sbjct 181 QSVNLHNIMHRRLVVGSQIAAEMREAMYNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQ-- 238 Query 66 VEATGATTAAATAATAAFLDSLN-VRKIPGVGKYREKMLNALGIHTCGEL 114 T + + SLN +++IPG+G K L LGI++ +L Sbjct 239 -------TVLLPESCQHLIHSLNHIKEIPGIGYKTAKRLEVLGINSVHDL 281 > tgo:TGME49_108880 DNA polymerase, putative (EC:2.7.7.7 3.2.1.91) Length=1613 Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 15/110 (13%) Query 22 TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATA 81 T L S IR + + GL+ +AG ++ +AK+A NKP+ Q ++ Sbjct 620 THLASAIRRYIGTHMGLTSTAGISTNKSLAKLAGAFNKPSRQTLL---------LPQHRR 670 Query 82 AFLDSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAPLLLYLLPKITAV 131 FL L ++KIPGVG ++L+ G+ TC A LL LP++ A+ Sbjct 671 GFLAPLALQKIPGVGSALVRLLSRAGLRTC------ADLLAVSLPRLAAI 714 > dre:678520 MGC136881, fc50a12, wu:fc50a12, zgc:152642; zgc:136881 (EC:2.7.7.7); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=743 Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 +V ++RAAV TG CSAG ++++AK+A +NKPN Q T ++ Sbjct 195 IVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQ---------TVLPLSSVPQL 245 Query 84 LDSLNVRKIPGV-GKYREKMLNALGIHTCGEL 114 +L + KI + GK + L + G+L Sbjct 246 FSTLPISKIRNLGGKLGSSITETLSVENMGDL 277 > dre:550532 wu:fc27h11; zgc:110185 (EC:2.7.7.7); K03510 DNA polymerase iota subunit [EC:2.7.7.7] Length=710 Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 13/101 (12%) Query 22 TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATA 81 + + +E+R A+ S GL+ AG +++++AK+ S KPN Q T + A Sbjct 182 SVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLVSGSFKPNQQ---------TTLLPHSNA 232 Query 82 AFLDSLN-VRKIPGVG-KYREKMLNALGIHTCGELLQHAPL 120 + SL + K+PG+G K REK L ALG+ + LQ PL Sbjct 233 ELMSSLTGLIKVPGIGYKTREK-LKALGLVNVRD-LQLYPL 271 > dre:570043 si:dkey-57a22.7; K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1268 Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 L IR + TG S G ++ ++A++A+ KP GQ ++ + F Sbjct 629 LARSIREDIKEKTGCCASVGMSSNILLARMATRKAKPKGQYLLR---------SEEVDDF 679 Query 84 LDSLNVRKIPGVGKYREKMLNALGIHTCGE 113 + V +PGVG+ L +LG+ TCG+ Sbjct 680 IRDQPVSSLPGVGRSMSSKLTSLGVSTCGD 709 > xla:446909 polh, MGC81702; polymerase (DNA directed), eta (EC:2.7.7.7); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=684 Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 0/43 (0%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIV 66 +V E+RAAV T CSAG ++++AK+A +NKPN Q I+ Sbjct 195 IVEEMRAAVEEETTFQCSAGIAHNKVLAKLACGLNKPNRQTIL 237 > mmu:56210 Rev1, 1110027I23Rik, AU022044, MGC66950, Rev1l; REV1 homolog (S. cerevisiae); K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1249 Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 9/91 (9%) Query 24 LVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAF 83 + +R + T + S G G++ ++A++A+ KP+GQ ++ F Sbjct 588 FAAALRIEIKDKTKCAASVGIGSNILLARMATKKAKPDGQYHLQPDEVDD---------F 638 Query 84 LDSLNVRKIPGVGKYREKMLNALGIHTCGEL 114 + V +PGVG+ E L +LGI TCG+L Sbjct 639 IRGQLVTNLPGVGRSMESKLASLGIKTCGDL 669 > hsa:51455 REV1, FLJ21523, MGC163283, MGC26225, REV1L; REV1 homolog (S. cerevisiae); K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1250 Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query 28 IRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFLDSL 87 +R + T + S G G++ ++A++A+ KP+GQ ++ F+ Sbjct 593 VRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDD---------FIRGQ 643 Query 88 NVRKIPGVGKYREKMLNALGIHTCGEL 114 V +PGVG E L +LGI TCG+L Sbjct 644 LVTNLPGVGHSMESKLASLGIKTCGDL 670 > tgo:TGME49_037480 ImpB/MucB/SamB family domain-containing protein (EC:2.7.7.7) Length=2474 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%) Query 16 ECRRRVTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAA 75 E + + E+R + TG S GAG + + AK+A KP ++ + + Sbjct 903 EAEKAILDACVELRQRIFERTGCWVSIGAGPNLLAAKLAGLQAKPKASSSSSSSSSLSRD 962 Query 76 ATAATA-------AFLDSLNVRKIPGVGKYR-EKMLNALGIHTCGELLQHA 118 AF+D + +RK+PGVG EK+ A + CG++++ Sbjct 963 GVCVIRPRESFLWAFMDQVPLRKLPGVGSMLGEKVEKAGRLRLCGQVMKEG 1013 > tgo:TGME49_057310 nuclear movement domain-containing protein Length=355 Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query 1 LLVLLLLQQKVSVRR--ECRRRVTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMN 58 L LL++KV+ RR + + V SE R + TG AGA A A+D Sbjct 205 LWFWELLEKKVNWRRLAQLAKDVNGQ-SEERTPATDGTG----AGADACPTPESRAADQT 259 Query 59 KPNGQKIVEATGATTAAATAATAAFLDSLNVRKIPGV-GKY 98 + Q + E G A FL+ +N+RK P V G Y Sbjct 260 EKEAQNLTETEGEAAGEGQEEVAVFLE-INLRKKPEVAGTY 299 > eco:b1184 umuC, ECK1172, JW1173, uvm; DNA polymerase V, subunit C; K03502 DNA polymerase V Length=422 Score = 35.8 bits (81), Expect = 0.036, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query 15 RECRRRVTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTA 74 R CR +T EIRA V T L+ G ++ +AK+A+ K + + G Sbjct 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR---QTGGVVDL 166 Query 75 AATAATAAFLDSLNVRKIPGVGKYREKMLNALGIHTCGEL 114 + + +L V + G+G+ K L+A+GI T +L Sbjct 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 > cpv:cgd4_3920 DinB/family X-type DNA polymerase ; K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=358 Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 0/45 (0%) Query 22 TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIV 66 + L+ R + T +CS+G ++I +K+ S + KPNGQ ++ Sbjct 271 SILIYRARKRLQEETTYTCSSGIFINKIYSKMISSLKKPNGQTVL 315 > cel:F53A3.2 polh-1; POLH (DNA polymerase eta) homolog family member (polh-1); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=584 Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query 6 LLQQKVSVRRECRRRVTALVS-----EIRAAVSSATGLSCSAGAGASRIVAKIASDMNKP 60 +L + + R C + L++ +IR + T CSAG G ++++AK+ +KP Sbjct 172 VLLEYIENARNCTENLLLLIAAVTVEQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKP 231 Query 61 NGQKIV 66 Q ++ Sbjct 232 RQQTLI 237 > ath:AT2G01440 ATP binding / ATP-dependent DNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Length=973 Score = 33.9 bits (76), Expect = 0.17, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query 66 VEATGATTAAATAATAAFLDSLNVRKIPGVGKYREKMLNALGIHTCGELLQHAP 119 VEAT AA A +DS+ PG+ K L++ G HT +LL H P Sbjct 203 VEATSDDVFAAQRFLATSIDSM-----PGLSKRHSNQLDSCGFHTMKKLLHHFP 251 > cel:ZK675.2 rev-1; REV1 (translesion DNA polymerase) homolog family member (rev-1); K03515 DNA repair protein REV1 [EC:2.7.7.-] Length=1027 Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 17/98 (17%) Query 22 TALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATA 81 T L IR + T S G G++ ++A++A+ KP+G V A Sbjct 562 TILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDGVFWVNAHKKN--------- 612 Query 82 AFLDSLNVRKIPGVGKYREKMLNAL-----GIHTCGEL 114 F+ V+ +PG G +M+N L I C EL Sbjct 613 EFISEEKVKDLPGFGY---EMMNRLTSFFGDITKCREL 647 > sce:YDR419W RAD30, DBH1; DNA polymerase eta, involved in tranlesion synthesis during post-replication repair; catalyzes the synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; mutations in human pol eta are responsible for XPV (EC:2.7.7.7); K03509 DNA polymerase eta subunit [EC:2.7.7.7] Length=632 Score = 32.3 bits (72), Expect = 0.45, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 0/40 (0%) Query 28 IRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVE 67 IR ++ G + S G +++ V K+AS+ KP+ Q IV+ Sbjct 248 IRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVK 287 > bbo:BBOV_I000470 16.m00783; ImpB/MucB/SamB family protein Length=1246 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 6/88 (6%) Query 32 VSSATGLSCSAGAGASRIVAKIASDMNKP--NGQKIVEATGATTAAATAA---TAAFLDS 86 + + T S G G + ++AK+AS K +G + V TG + A AF+ S Sbjct 562 IETETECPLSIGIGDNMMLAKLASQRCKALKHGSEEV-PTGYVLSGNVCAIQDVEAFIAS 620 Query 87 LNVRKIPGVGKYREKMLNALGIHTCGEL 114 +++ ++PGVG +L + G C ++ Sbjct 621 VSLHELPGVGDRTLDILKSCGYVYCSDI 648 > eco:b0081 mraZ, ECK0082, JW0079, yabB; conserved protein, MraZ family; K03925 MraZ protein Length=152 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query 78 AATAAFLDSLNVRKIPGVGKYREKML-NALGIHTCGELLQHAPLLLYLLPKITAVH 132 AT LDS +P +YRE++L NA G C + H LLLY LP+ + Sbjct 4 GATLVNLDSKGRLSVPT--RYREQLLENAAGQMVCTIDIYHPCLLLYPLPEWEIIE 57 > tgo:TGME49_064140 hypothetical protein Length=4532 Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 0/68 (0%) Query 30 AAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFLDSLNV 89 + VSSA+ LS A +G + + + N P ++++ +G AAT +F D +V Sbjct 3185 SVVSSASRLSTRAQSGDTELHLEEDKGSNSPESRRLITHSGIERTAATEKKLSFSDEGSV 3244 Query 90 RKIPGVGK 97 G+ K Sbjct 3245 GTGEGLTK 3252 > dre:565064 serpina10a, si:dkey-85n7.5; serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a Length=391 Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query 25 VSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVEATG 70 V EI ++ TG+S S G S + K+A D+++ G + EA+G Sbjct 306 VKEIFGNTANLTGISSSEGLKLSEVEQKVAVDVDESGG-SLAEASG 350 > mmu:232196 MGC25529; expressed sequence C87436 Length=574 Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query 43 GAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFLDSLNVRKIPGVGKYREKM 102 G A V+ S +KP +K E +GA ++ A + N+RK G R + Sbjct 285 GCHAESSVSACESAASKPRKRKKDEVSGAQVNSSLMPQDAV--NSNLRK---SGLKRPVV 339 Query 103 LNALGIHTCGELLQHAPLLL 122 ++L H CG+LL A + L Sbjct 340 TSSLKRHVCGQLLDEAQVTL 359 > sce:YDL122W UBP1; Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins; cleaves at the C terminus of ubiquitin fusions irrespective of their size; capable of cleaving polyubiquitin chains (EC:3.1.2.15); K11870 ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15] Length=809 Score = 28.1 bits (61), Expect = 8.5, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Query 28 IRAAVSSATGLSC-SAGAGASRIVAKIASDMNKPNGQKIVEATGATTAAATAATAAFLDS 86 IR +V S L+ + G++ ++++ SD +KP +I+E A TAA + Sbjct 346 IRYSVFSGLSLNLPNENIGSTLKLSQLLSDWSKP---EIIEGVECNRCALTAAHSHLFGQ 402 Query 87 LNVRKIPGVGKYREKMLNALG--IHTCGELL 115 L + G EK++NA+ +H E+L Sbjct 403 LKEFEKKPEGSIPEKLINAVKDRVHQIEEVL 433 > tgo:TGME49_069620 hypothetical protein Length=554 Score = 28.1 bits (61), Expect = 9.3, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query 16 ECRRRVTALVSEIRAAVSSATGLSCSAGAGASRIVAKIASDMNKPNGQKIVE---ATGAT 72 E RR + ++ RA VS++ G+ C G+G A A + P G+ G Sbjct 355 EQRRHIVPDATDTRA-VSASMGIECPQGSGLPPSGAHAAVSAH-PGGEYAANGCVGVGHE 412 Query 73 TAAATAATAA-------FLDSLNVRKIPGV 95 +A+ TAAT A F +VR+ P V Sbjct 413 SASGTAATVAEARGRLSFESGADVREKPSV 442 Lambda K H 0.321 0.132 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2428006156 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40