bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1104_orf1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_056990 glycyl-tRNA synthetase, putative (EC:6.1.1.1... 157 1e-38
cpv:cgd8_1030 glycyl-tRNA synthetase ; K01880 glycyl-tRNA synt... 144 1e-34
bbo:BBOV_I003770 19.m02173; glycyl-tRNA synthetase (EC:6.1.1.1... 139 3e-33
tpv:TP01_0460 glycyl-tRNA synthetase; K01880 glycyl-tRNA synth... 130 9e-31
pfa:PF14_0198 glycine-tRNA ligase, putative; K01880 glycyl-tRN... 130 2e-30
sce:YPR081C GRS2; Grs2p (EC:6.1.1.14); K01880 glycyl-tRNA synt... 124 8e-29
ath:AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase (E... 123 2e-28
sce:YBR121C GRS1; Grs1p (EC:6.1.1.14); K01880 glycyl-tRNA synt... 122 3e-28
cel:T10F2.1 grs-1; Glycyl tRNA Synthetase family member (grs-1... 112 2e-25
hsa:2617 GARS, CMT2D, DSMAV, GlyRS, HMN5, SMAD1; glycyl-tRNA s... 112 3e-25
mmu:353172 Gars, Nmf249, Sgrp23; glycyl-tRNA synthetase (EC:6.... 111 6e-25
xla:734988 hypothetical protein MGC130901; K01880 glycyl-tRNA ... 111 8e-25
xla:446482 gars, MGC79076; glycyl-tRNA synthetase (EC:6.1.1.14... 111 9e-25
dre:337230 fb02f03, wu:fb02f03; si:dkey-276i5.1; K01880 glycyl... 110 9e-25
ath:AT1G29870 tRNA synthetase class II (G, H, P and S) family ... 94.7 8e-20
ath:AT3G44740 ATP binding / aminoacyl-tRNA ligase/ glycine-tRN... 68.2 9e-12
xla:100127347 grin2b, nmdar2b, nr2b; glutamate receptor, ionot... 30.8 1.2
xla:100126610 nr2b; ionotropic glutamate receptor subunit NR2B... 30.8 1.3
hsa:23224 SYNE2, DKFZp434H2235, DKFZp686E01115, DKFZp686H1931,... 30.8 1.5
ath:AT2G42700 hypothetical protein 30.8 1.5
cel:F47G4.7 smd-1; SAM Decarboxylase family member (smd-1); K0... 30.0 2.2
pfa:PF13_0135 vacuolar protein sorting 52 homologue 29.6 3.0
mmu:239796 1600021P15Rik, A430031N04, C87006, MGC103296, Mb21d... 29.6 3.1
cpv:cgd6_3120 hypothetical protein 29.3 3.5
ath:AT1G63710 CYP86A7; fatty acid (omega-1)-hydroxylase/ oxyge... 29.3 4.1
tgo:TGME49_054200 glycyl-tRNA synthetase, putative (EC:6.1.1.14) 29.3 4.1
mmu:100019 Mdn1, 4833432B22Rik, A130070M06, AA958993, D4Abb1e,... 29.3 4.2
dre:100148274 zinc finger protein 502-like 28.5 7.2
tpv:TP01_1006 hypothetical protein 28.5 7.4
hsa:9950 GOLGA5, GOLIM5, RFG5, ret-II; golgin A5 28.5 7.5
hsa:642623 UBTFL1, C11orf27, HMGPI; upstream binding transcrip... 28.1 7.9
> tgo:TGME49_056990 glycyl-tRNA synthetase, putative (EC:6.1.1.14
6.1.1.3); K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=771
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query 33 RIEELQQQLQQEEVPHFIKYKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNE 92
++ EL++QL+ P + + + Q E LLKRRFFVVPS+EIYGG GLYD GPPGCALK+
Sbjct 117 QVTELEKQLESTR-PLYYQLRSQCENLLKRRFFVVPSYEIYGGVGGLYDFGPPGCALKSA 175
Query 93 VENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTDFMVEDEVT 140
VE LWR HFVL EDMLE+SG CLTP+ VLK SGHVDRFTD MV+D VT
Sbjct 176 VEQLWRQHFVLAEDMLEVSGPCLTPHIVLKTSGHVDRFTDLMVKDTVT 223
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQQLQQEEVPHFIKYKQQFERL 59
GHVDRFTD MV+D VT +C RADKYLEE ID+R+ ++ + EE ++Q + L
Sbjct 208 GHVDRFTDLMVKDTVTQDCLRADKYLEEKIDERLNA-KEGISPEEASRLALLRRQADAL 265
> cpv:cgd8_1030 glycyl-tRNA synthetase ; K01880 glycyl-tRNA synthetase
[EC:6.1.1.14]
Length=656
Score = 144 bits (362), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/89 (73%), Positives = 73/89 (82%), Gaps = 0/89 (0%)
Query 49 FIKYKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDML 108
I+ ++ E LLKRRFF+ PSFEIYGG AGL+D GPPGCALK+EVE+ WR HFVL EDML
Sbjct 6 LIERREALENLLKRRFFIAPSFEIYGGVAGLFDYGPPGCALKSEVESFWRRHFVLAEDML 65
Query 109 EISGTCLTPYAVLKASGHVDRFTDFMVED 137
EIS TCLTPY LKASGHVDRFTD M+ D
Sbjct 66 EISATCLTPYNPLKASGHVDRFTDSMITD 94
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 0/36 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEE 36
GHVDRFTD M+ D T E +RADK LEE ++ R++E
Sbjct 82 GHVDRFTDSMITDIKTNEYYRADKVLEEYVENRLKE 117
> bbo:BBOV_I003770 19.m02173; glycyl-tRNA synthetase (EC:6.1.1.14);
K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=733
Score = 139 bits (349), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/125 (53%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query 16 TGECFRADKYLEEVIDKRIEELQQQLQQEEVPHFIKY-KQQFERLLKRRFFVVPSFEIYG 74
T C + + V + I ++ + + + +K K E LLKRRFF SF+IYG
Sbjct 65 TSNCLHSQRNFSTVQHQTIRDIT--MDSKSLVDLLKANKASCENLLKRRFFYANSFDIYG 122
Query 75 GSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTDFM 134
G+AGLYD GPPGCALK E+ENLWR HFV+ ++MLE+S C+TPYAVLKASGH+DRFTD M
Sbjct 123 GAAGLYDYGPPGCALKVELENLWRQHFVIFDEMLEVSCPCITPYAVLKASGHIDRFTDLM 182
Query 135 VEDEV 139
V D V
Sbjct 183 VTDVV 187
Score = 61.6 bits (148), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 0/46 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQQLQQEEV 46
GH+DRFTD MV D V GEC+RADKYLE+VID I L+ + + V
Sbjct 173 GHIDRFTDLMVTDVVNGECYRADKYLEDVIDSVISTLKGKTVADNV 218
> tpv:TP01_0460 glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase
[EC:6.1.1.14]
Length=874
Score = 130 bits (328), Expect = 9e-31, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 70/81 (86%), Gaps = 0/81 (0%)
Query 57 ERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTCLT 116
E LL+RRFF SFEIYGGSAGL+D GPPGCALK+E+E LWR HF++ ++MLE+S +C+T
Sbjct 183 ENLLRRRFFYANSFEIYGGSAGLFDFGPPGCALKSELERLWREHFIVFDEMLEVSCSCIT 242
Query 117 PYAVLKASGHVDRFTDFMVED 137
P+ VLK+SGHVDRFTD MV++
Sbjct 243 PHPVLKSSGHVDRFTDLMVKN 263
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 0/34 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRI 34
GHVDRFTD MV++ G+C+RADKYL+++I I
Sbjct 251 GHVDRFTDLMVKNLSNGDCYRADKYLQDLISNII 284
> pfa:PF14_0198 glycine-tRNA ligase, putative; K01880 glycyl-tRNA
synthetase [EC:6.1.1.14]
Length=889
Score = 130 bits (326), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query 12 EDEVTGECFRADKYLEEVIDKRIEELQQQLQQEEVPHFIKYKQQFERLLKRRFFVVPSFE 71
++++ E +K L+ DK+++ + E ++ + + E L+KR+FF SFE
Sbjct 126 DEDLKKEFMENEKLLQ---DKKMKLKDLYGKPSEELKLVENRTKLENLVKRKFFYTNSFE 182
Query 72 IYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFT 131
IYGG++GL+D GP GC LK+E+ENLWR HF+ ++MLEISG+C+TPY VLK SGHVDRFT
Sbjct 183 IYGGASGLFDYGPSGCLLKSELENLWRCHFIYYDEMLEISGSCVTPYQVLKTSGHVDRFT 242
Query 132 DFMVEDEVT 140
D M+ D VT
Sbjct 243 DLMIRDVVT 251
Score = 56.2 bits (134), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 32/40 (80%), Gaps = 0/40 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQQ 40
GHVDRFTD M+ D VT +C+RADKYL + + +IEEL+++
Sbjct 236 GHVDRFTDLMIRDVVTNDCYRADKYLGDFLKAKIEELRKK 275
> sce:YPR081C GRS2; Grs2p (EC:6.1.1.14); K01880 glycyl-tRNA synthetase
[EC:6.1.1.14]
Length=618
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 0/88 (0%)
Query 53 KQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISG 112
+ + E L+RRFF PSFEIYGG +GL+DLGPPGC L+N + LWR HF++EE+ML++ G
Sbjct 9 RDKLESTLRRRFFYTPSFEIYGGVSGLFDLGPPGCQLQNNLIRLWREHFIMEENMLQVDG 68
Query 113 TCLTPYAVLKASGHVDRFTDFMVEDEVT 140
LTPY VLK SGHVD+FTD+M + T
Sbjct 69 PMLTPYDVLKTSGHVDKFTDWMCRNPKT 96
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRI 34
GHVD+FTD+M + TGE +RAD +E+ + KR+
Sbjct 81 GHVDKFTDWMCRNPKTGEYYRADHLIEQTLKKRL 114
> ath:AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase
(EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=729
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%), Gaps = 0/89 (0%)
Query 52 YKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEIS 111
+++ L+RR F +PSF+IY G AGL+D GPPGCA+K+ V + WR HF+LEE+MLE+
Sbjct 116 FRKAVVNTLERRLFYIPSFKIYSGVAGLFDYGPPGCAIKSNVLSFWRQHFILEENMLEVD 175
Query 112 GTCLTPYAVLKASGHVDRFTDFMVEDEVT 140
C+TP VLKASGHVD+FTD MV+DE T
Sbjct 176 CPCVTPEVVLKASGHVDKFTDLMVKDEKT 204
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%), Gaps = 0/36 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEE 36
GHVD+FTD MV+DE TG C+RAD L++ +++E+
Sbjct 189 GHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEK 224
> sce:YBR121C GRS1; Grs1p (EC:6.1.1.14); K01880 glycyl-tRNA synthetase
[EC:6.1.1.14]
Length=667
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 0/85 (0%)
Query 53 KQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISG 112
++Q E +L+ RFF P+F++YGG +GLYD GPPGCA +N + + WR HF+LEEDMLE+
Sbjct 17 REQLESVLRGRFFYAPAFDLYGGVSGLYDYGPPGCAFQNNIIDAWRKHFILEEDMLEVDC 76
Query 113 TCLTPYAVLKASGHVDRFTDFMVED 137
T LTPY VLK SGHVD+F+D+M D
Sbjct 77 TMLTPYEVLKTSGHVDKFSDWMCRD 101
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 0/39 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQ 39
GHVD+F+D+M D TGE FRAD +EEV++ R++ Q+
Sbjct 89 GHVDKFSDWMCRDLKTGEIFRADHLVEEVLEARLKGDQE 127
> cel:T10F2.1 grs-1; Glycyl tRNA Synthetase family member (grs-1);
K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=742
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 0/83 (0%)
Query 55 QFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTC 114
+ E LLKRRFF SF IYGG GLYD GP GC+LK + WR HF+LEE MLE+ T
Sbjct 133 KLEDLLKRRFFYDQSFAIYGGVTGLYDFGPMGCSLKANMLQEWRKHFILEEGMLEVDCTS 192
Query 115 LTPYAVLKASGHVDRFTDFMVED 137
LTP VLKASGHVDRF D+MV+D
Sbjct 193 LTPEPVLKASGHVDRFADWMVKD 215
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 0/36 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEE 36
GHVDRF D+MV+D GECFRAD ++ I+K + +
Sbjct 203 GHVDRFADWMVKDMKNGECFRADHLIKNSIEKLLND 238
> hsa:2617 GARS, CMT2D, DSMAV, GlyRS, HMN5, SMAD1; glycyl-tRNA
synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=739
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query 20 FRADKYLEEVIDKRIEELQQQLQQEEVPHF-------IKYKQQFERLLKRRFFVVPSFEI 72
+ DK + +DK + EL+ + + E I + + E LKRRFF +F I
Sbjct 81 LKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAI 140
Query 73 YGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTD 132
YGG +GLYD GP GCALKN + WR HF+ EE +LEI T LTP VLK SGHVD+F D
Sbjct 141 YGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFAD 200
Query 133 FMVED 137
FMV+D
Sbjct 201 FMVKD 205
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 0/36 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEE 36
GHVD+F DFMV+D GECFRAD L+ + K + +
Sbjct 193 GHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSD 228
> mmu:353172 Gars, Nmf249, Sgrp23; glycyl-tRNA synthetase (EC:6.1.1.14);
K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=729
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query 20 FRADKYLEEVIDKRIEELQQQLQQEEVPHF-------IKYKQQFERLLKRRFFVVPSFEI 72
+ DK + +D+ + EL+ + + E I + + E LKRRFF +F I
Sbjct 71 LKEDKAPQVDVDRAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAI 130
Query 73 YGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTD 132
YGG +GLYD GP GCALKN + WR HF+ EE +LEI T LTP VLK SGHVD+F D
Sbjct 131 YGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFAD 190
Query 133 FMVED 137
FMV+D
Sbjct 191 FMVKD 195
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 0/36 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEE 36
GHVD+F DFMV+D GECFRAD L+ + K + +
Sbjct 183 GHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSD 218
> xla:734988 hypothetical protein MGC130901; K01880 glycyl-tRNA
synthetase [EC:6.1.1.14]
Length=740
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query 30 IDKRIEELQQQLQQEEVPHF-------IKYKQQFERLLKRRFFVVPSFEIYGGSAGLYDL 82
+D+ + EL+ + + E I + + E LKRRFF +F IYGG +GLYD
Sbjct 92 VDRAVAELKARKRTLEAKELSLQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDF 151
Query 83 GPPGCALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTDFMVED 137
GP GCALKN + WR HF+ EE +LEI T LTP VLK SGHVD+F DFMV+D
Sbjct 152 GPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKD 206
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEE-----VIDKRIEELQQQLQQEEVPHFIKYKQQ 55
GHVD+F DFMV+D GECFRAD L+ + DK+ ++Q + + Y QQ
Sbjct 194 GHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCPAEKKQEMESVLTQMDNYNQQ 253
> xla:446482 gars, MGC79076; glycyl-tRNA synthetase (EC:6.1.1.14);
K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=747
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 0/85 (0%)
Query 53 KQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISG 112
+ + E LKRRFF +F IYGG +GLYD GP GCALKN + +WR HF+ EE +LEI
Sbjct 129 RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQIWRQHFIQEEQILEIDC 188
Query 113 TCLTPYAVLKASGHVDRFTDFMVED 137
T LTP VLK SGHVD+F D+MV+D
Sbjct 189 TMLTPEPVLKTSGHVDKFADYMVKD 213
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEE-----VIDKRIEELQQQLQQEEVPHFIKYKQQ 55
GHVD+F D+MV+D GECFRAD L+ + DK+ ++Q + + Y QQ
Sbjct 201 GHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCPAEKKQEMESVLTQMDNYSQQ 260
> dre:337230 fb02f03, wu:fb02f03; si:dkey-276i5.1; K01880 glycyl-tRNA
synthetase [EC:6.1.1.14]
Length=764
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 0/85 (0%)
Query 53 KQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISG 112
+ + E LKRRFF +F IYGG +GLYD GP GCALKN + +WR HF+ EE +LEI
Sbjct 146 RTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEIDC 205
Query 113 TCLTPYAVLKASGHVDRFTDFMVED 137
T LTP VLK SGHVD+F D+MV+D
Sbjct 206 TMLTPEPVLKTSGHVDKFADYMVKD 230
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQQLQQE-EVPHFIKYKQQFERL 59
GHVD+F D+MV+D GECFRAD L+ + K + + + +++ E+ + I + +
Sbjct 218 GHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCPAEKKAEMDNVITQMDNYTQQ 277
Query 60 LKRRFFVVPSFEIYGGSAGLYDLGPP 85
FV + + S G DL PP
Sbjct 278 ELADLFV--QYNVKSPSTG-NDLTPP 300
> ath:AT1G29870 tRNA synthetase class II (G, H, P and S) family
protein; K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Length=463
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 0/88 (0%)
Query 52 YKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEIS 111
+++ + L R FV SF+IY G AGLYD GP G ++ + +LWR FV EEDM+E++
Sbjct 60 FREAVVKTLDRLLFVHKSFDIYHGVAGLYDFGPHGRTVELNILSLWRKCFVDEEDMMEVA 119
Query 112 GTCLTPYAVLKASGHVDRFTDFMVEDEV 139
T LTP AV ASGHV +FTD MV+DEV
Sbjct 120 CTALTPEAVFNASGHVKKFTDLMVKDEV 147
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 1 GHVDRFTDFMVEDEVTGECFRADKYLEEVIDKR 33
GHV +FTD MV+DEV G RAD ++ + R
Sbjct 133 GHVKKFTDLMVKDEVDGAFHRADHLVKSYCENR 165
> ath:AT3G44740 ATP binding / aminoacyl-tRNA ligase/ glycine-tRNA
ligase/ nucleotide binding
Length=261
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 0/48 (0%)
Query 87 CALKNEVENLWRSHFVLEEDMLEISGTCLTPYAVLKASGHVDRFTDFM 134
CA+K+ V + WR HF+L+E+M E+ C+TP VLKASGHVD+FTD M
Sbjct 30 CAVKSNVLSFWRQHFILKENMYEVDCPCVTPEVVLKASGHVDQFTDLM 77
> xla:100127347 grin2b, nmdar2b, nr2b; glutamate receptor, ionotropic,
N-methyl D-aspartate 2B; K05210 glutamate receptor,
ionotropic, N-methyl-D-aspartate 2B
Length=1449
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query 37 LQQQLQQEEVPHFIKYKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNE---V 93
L Q+ + E V KYK +R LK +++V P F++Y P K+E +
Sbjct 362 LNQERKWERVG---KYK---DRSLKMKYYVWPVFDLY----------PNSEEHKDEHLSI 405
Query 94 ENLWRSHFVLEEDMLEISGTCL 115
L + FV+ ED+ +SGTC+
Sbjct 406 VTLEEAPFVIVEDVDPLSGTCM 427
> xla:100126610 nr2b; ionotropic glutamate receptor subunit NR2B;
K05210 glutamate receptor, ionotropic, N-methyl-D-aspartate
2B
Length=1448
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query 37 LQQQLQQEEVPHFIKYKQQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNE---V 93
L Q+ + E V KYK +R LK +++V P F++Y P K+E +
Sbjct 362 LNQERKWERVG---KYK---DRSLKMKYYVWPVFDLY----------PNSEEHKDEHLSI 405
Query 94 ENLWRSHFVLEEDMLEISGTCL 115
L + FV+ ED+ +SGTC+
Sbjct 406 VTLEEAPFVIVEDVDPLSGTCM 427
> hsa:23224 SYNE2, DKFZp434H2235, DKFZp686E01115, DKFZp686H1931,
EDMD5, FLJ11014, FLJ43727, FLJ45710, FLJ46790, KIAA1011,
NUA, NUANCE, Nesprin-2, SYNE-2, TROPH; spectrin repeat containing,
nuclear envelope 2
Length=6885
Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query 28 EVIDKRIEELQQQLQQEEVPHFIK-YKQQFERLLK 61
EV+ + EEL Q Q+EV +K Y+Q+ ERLLK
Sbjct 997 EVLRELCEELPSQKSQQEVKRLLKDYEQKIERLLK 1031
> ath:AT2G42700 hypothetical protein
Length=838
Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Query 6 FTDFMVEDEVTGECFRADKYLEEVIDKRIEE--------LQQQLQQEEV 46
+T+ + V ECFR YLE +ID++ ++ LQ+ L++E +
Sbjct 409 WTELLNGSLVATECFRGTPYLEAMIDRKTKDGSVLVKKWLQEALRRENI 457
> cel:F47G4.7 smd-1; SAM Decarboxylase family member (smd-1);
K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
Length=368
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query 18 ECFRADKYLEEVIDKRIEE----LQQQLQQEEVPHFIKYKQQFERL 59
+CFR +K L V I E QQQL E+P + + QF RL
Sbjct 291 QCFRPNKILMTVFANDISEKGKDAQQQLWDRELPGYRRTNVQFVRL 336
> pfa:PF13_0135 vacuolar protein sorting 52 homologue
Length=1353
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query 5 RFTDFMVEDEVTGE-CFRADKYLEEVIDK---RIEELQQQLQQEEVPHFIKYKQQFERL 59
+FTDF + CF D Y +E IDK ++ +Q+L++ + H + +++ +++
Sbjct 959 KFTDFYCSVVILSNLCFHIDTYYKEKIDKQKVKVGYQEQKLKENKNQHLMNMEEKVDKI 1017
> mmu:239796 1600021P15Rik, A430031N04, C87006, MGC103296, Mb21d2;
RIKEN cDNA 1600021P15 gene
Length=491
Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query 85 PGCALKNEVENLWRSHFVLEEDMLE--ISGTCLTPYAVLKA 123
P C+ K + +N WR F E L+ ISG+ + Y KA
Sbjct 275 PACSYKGKKDNEWRLSFARSEVQLKKCISGSLMQAYQACKA 315
> cpv:cgd6_3120 hypothetical protein
Length=794
Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
Query 24 KYLEEVIDKRIEELQQQ 40
KY+E ++DK IEELQ+Q
Sbjct 768 KYIESILDKEIEELQRQ 784
> ath:AT1G63710 CYP86A7; fatty acid (omega-1)-hydroxylase/ oxygen
binding
Length=523
Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query 11 VEDEVTGECFRADKYLEEVIDKRIEELQQQLQQEEVPH------FIKYKQQF 56
+ED+++ D YL E+I+ R EL Q QQ+E H F+K K+ +
Sbjct 240 LEDDMSRSISHVDNYLSEIINTRKLELLGQ-QQDESRHDDLLSRFMKKKESY 290
> tgo:TGME49_054200 glycyl-tRNA synthetase, putative (EC:6.1.1.14)
Length=779
Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 0/49 (0%)
Query 54 QQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFV 102
Q + K VVP+ E+YGG G D G G L + S F+
Sbjct 276 QDLKTFCKDHAIVVPAAELYGGLKGTVDFGAVGHRLLQNLRRALNSFFL 324
> mmu:100019 Mdn1, 4833432B22Rik, A130070M06, AA958993, D4Abb1e,
Gm135; midasin homolog (yeast); K14572 midasin
Length=5582
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query 54 QQFERLLKRRFFVVPSFEIYGGSAGLYDLGPPGCALKNEVENLWRSHFVLEEDMLEISGT 113
+ E L + F + + GG G +L P AL+N +W ED+++I
Sbjct 1499 NEVELLTAGKHFRILATMNPGGDFGKKELSP---ALRNRFTEIWCPQSTKREDLIQIINH 1555
Query 114 CLTPYAVLKASGH 126
L P L GH
Sbjct 1556 NLRPGLSLAGVGH 1568
> dre:100148274 zinc finger protein 502-like
Length=1462
Score = 28.5 bits (62), Expect = 7.2, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query 40 QLQQEEVPH----------FIKYKQQ----FERLLKRRFFVVPSFEIYGGSAGLYDLGPP 85
Q +Q EVPH F+K K++ + +K+R V+ G + +Y+LG P
Sbjct 1263 QREQPEVPHGERQRNEKRNFLKRKRRAIHRTQHKIKKRMAVLVRIRRGSGGSAVYELGLP 1322
Query 86 GCALKNEVENL 96
G N + +L
Sbjct 1323 GGLKLNRLRSL 1333
> tpv:TP01_1006 hypothetical protein
Length=286
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query 3 VDRFTDFMVEDEVTGECFRADKYLEEVIDKRIEELQQQLQQ--EEVPHFIKYKQQFERLL 60
V R TD + +VTG Y E+IDK +E++ + + F K++ +
Sbjct 91 VKRTTDLELLAKVTGNTIATADYCLEMIDKLADEIKDNISHTYSSLITFTNEKEKISAVK 150
Query 61 KRRFFVVPSFEI----YGGSAGLYDLGPPGCALKNE 92
F ++ F Y L GP +KNE
Sbjct 151 SDSFKLLLDFMCTFLPYSTETNLDVSGPSDLLVKNE 186
> hsa:9950 GOLGA5, GOLIM5, RFG5, ret-II; golgin A5
Length=731
Score = 28.5 bits (62), Expect = 7.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query 24 KYLEEVIDKRIEELQQQLQ------QEEVPHFIKYKQQFERLLKRRFFVVPSFEIYGGSA 77
KY +E KR++ELQQQ++ + I YKQ+ R+L+ + ++ S + G
Sbjct 399 KYSDE--KKRVDELQQQVKLYKLNLESSKQELIDYKQKATRILQSKEKLINSLKEGSGFE 456
Query 78 GL 79
GL
Sbjct 457 GL 458
> hsa:642623 UBTFL1, C11orf27, HMGPI; upstream binding transcription
factor, RNA polymerase I-like 1
Length=393
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 0/37 (0%)
Query 26 LEEVIDKRIEELQQQLQQEEVPHFIKYKQQFERLLKR 62
L +++ K+ EL +Q++Q+ + F K KQ+FE L R
Sbjct 130 LTKILSKKYRELPEQMKQKYIQDFRKEKQEFEEKLAR 166
Lambda K H
0.322 0.141 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2552834388
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40