bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1114_orf1
Length=213
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_059220 ATP-dependent nucleolar RNA helicase, putati... 184 2e-46
cpv:cgd3_3380 Dbp9p, eIF4A-1-family RNA SFII helicase, DEXDc+H... 154 2e-37
dre:445399 ddx56, noh61, zgc:110078; DEAD (Asp-Glu-Ala-Asp) bo... 110 3e-24
mmu:52513 Ddx56, 2600001H07Rik, D11Ertd619e, Noh61; DEAD (Asp-... 100 5e-21
hsa:54606 DDX56, DDX21, DDX26, NOH61; DEAD (Asp-Glu-Ala-Asp) b... 96.3 6e-20
sce:YLR276C DBP9; ATP-dependent RNA helicase of the DEAD-box f... 94.0 3e-19
bbo:BBOV_IV002200 21.m02820; DEAD/DEAH box helicase 91.7 2e-18
xla:414578 ddx56, MGC81243; DEAD (Asp-Glu-Ala-Asp) box polypep... 91.7 2e-18
ath:AT4G34910 DEAD/DEAH box helicase, putative (RH16); K14810 ... 87.4 3e-17
cel:C24H12.4 hypothetical protein; K14810 ATP-dependent RNA he... 79.3 1e-14
tpv:TP03_0433 ATP-dependent RNA helicase 70.9 3e-12
pfa:PFL2010c DEAD/DEAH box helicase, putative; K01509 adenosin... 67.4 3e-11
cpv:cgd7_3940 eIF4A-1; eukaryotic translation initiation facto... 47.0 4e-05
xla:414715 hypothetical protein MGC83105; K13179 ATP-dependent... 46.2 8e-05
tgo:TGME49_112990 ATP-dependent RNA helicase, putative (EC:5.9... 46.2 8e-05
tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicas... 45.8 1e-04
cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA h... 45.1 2e-04
eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase; K... 45.1 2e-04
cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 44.7 2e-04
sce:YLL008W DRS1; Drs1p (EC:3.6.1.-); K13181 ATP-dependent RNA... 44.7 3e-04
hsa:8886 DDX18, FLJ33908, MrDb; DEAD (Asp-Glu-Ala-Asp) box pol... 44.3 3e-04
mmu:66942 Ddx18, 2310005B10Rik, MGC117904; DEAD (Asp-Glu-Ala-A... 44.3 3e-04
dre:321127 ddx18, cb155, sb:cb155, wu:fa19d11; DEAD (Asp-Glu-A... 44.3 3e-04
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 43.5 5e-04
pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase... 43.1 7e-04
sce:YMR290C HAS1; ATP-dependent RNA helicase; localizes to bot... 43.1 7e-04
tpv:TP04_0821 ATP-dependent RNA helicase; K13179 ATP-dependent... 42.7 0.001
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 42.7 0.001
bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicas... 42.4 0.001
tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K1477... 42.4 0.001
tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.... 42.0 0.002
dre:445387 ddx51, MGC111800, zgc:111800; DEAD (Asp-Glu-Ala-Asp... 41.6 0.002
hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box poly... 41.6 0.002
mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD ... 41.6 0.002
tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.9... 41.2 0.003
ath:AT5G26742 emb1138 (embryo defective 1138); ATP binding / A... 40.8 0.004
ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181 ... 40.8 0.004
pfa:PF13_0037 DEAD box helicase, putative; K01509 adenosinetri... 40.4 0.005
eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-depende... 40.0 0.005
xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polype... 39.7 0.008
hsa:1662 DDX10, HRH-J8; DEAD (Asp-Glu-Ala-Asp) box polypeptide... 39.7 0.008
xla:398180 ddx25, deadsouth, grth; DEAD (Asp-Glu-Ala-Asp) box ... 39.3 0.011
mmu:30959 Ddx25, AW047046, GRTH; DEAD (Asp-Glu-Ala-Asp) box po... 38.9 0.013
mmu:13680 Ddx19a, DBP5, Ddx19, Eif4a-rs1; DEAD (Asp-Glu-Ala-As... 38.9 0.014
cpv:cgd3_3920 DEAD/DEAH box ATP-dependent RNA helicase ; K1317... 38.9 0.015
cpv:cgd6_4830 Drs1p, eIF4a-1-family RNA SFII helicase ; K13181... 38.9 0.015
mmu:234733 Ddx19b, 2810457M08Rik, 4921519L13Rik, AW260119; DEA... 38.5 0.017
hsa:11269 DDX19B, DBP5, DDX19, RNAh; DEAD (Asp-Glu-Ala-As) box... 38.5 0.018
hsa:55308 DDX19A, DDX19-DDX19L, DDX19L, DKFZp686C21137, FLJ111... 38.5 0.019
ath:AT5G65900 DEAD/DEAH box helicase, putative; K13179 ATP-dep... 38.5 0.019
> tgo:TGME49_059220 ATP-dependent nucleolar RNA helicase, putative
(EC:3.4.21.72); K14810 ATP-dependent RNA helicase DDX56/DBP9
[EC:3.6.4.13]
Length=888
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 116/160 (72%), Gaps = 5/160 (3%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL +FGFEN+ RLL LP+TA RHYQ +L+SAT N E+++LQ ++LHK ++++I
Sbjct 358 DLLLSFGFENEMNRLLACLPATAERHYQALLLSATLNEEVAKLQQMLLHKAVMVEI---- 413
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A+S +SEFY +P +KW+V YAFL+L LVP KCL+F VSS Y +R+FL+
Sbjct 414 -DDTLQQASSQLSEFYLSLPKAGDKWVVLYAFLKLNLVPRKCLIFTSGVSSAYGVRIFLE 472
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQF 160
RFGI GVLSPTL + +R+ IQAFN+GL++ILIT DG +
Sbjct 473 RFGIGCGVLSPTLSIESRQSLIQAFNKGLLEILITTDGAW 512
> cpv:cgd3_3380 Dbp9p, eIF4A-1-family RNA SFII helicase, DEXDc+HELICc
; K14810 ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Length=664
Score = 154 bits (390), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/165 (41%), Positives = 109/165 (66%), Gaps = 8/165 (4%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKI---- 56
DLLFAFG++ D ++L LLP++ R YQ IL+SAT N E+ L+ ++LH+P+ + I
Sbjct 181 DLLFAFGYDKDMSKVLDLLPNSQDRKYQCILLSATLNKEVDSLKKMVLHRPIFVDIKPEI 240
Query 57 ----VEEEGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
++EG+ + + +SE+Y + +KWL+ Y L++ ++P KCL+F +V +
Sbjct 241 KEDYFDQEGNDSKCQTSGLLSEYYTICDSMVDKWLMLYILLKMNVIPRKCLIFVSEVDTA 300
Query 113 YALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
Y+++LFL+RFG++ GVL+P +P A R IQ FNQG DIL+T+D
Sbjct 301 YSIKLFLERFGMSCGVLTPIIPAATRRMLIQCFNQGSYDILVTSD 345
> dre:445399 ddx56, noh61, zgc:110078; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 56 (EC:3.6.4.13); K14810 ATP-dependent RNA helicase
DDX56/DBP9 [EC:3.6.4.13]
Length=557
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLLF+FGFE D K LL LP YQ L+SAT N ++ L+ L+LH P+ +K+ +
Sbjct 166 DLLFSFGFEADLKNLLCHLPKI----YQAFLMSATLNDDVQALKELVLHNPVTLKL---Q 218
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
GS S S + +F + E +K+L+ Y L+LGL+ K L+F DV Y L+LFL+
Sbjct 219 GSQLPDS--SQLQQFSIKC-EEEDKFLLIYTMLKLGLIQGKTLLFVSDVDRSYRLKLFLE 275
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG 163
+F I + VL+ LPV +R I FNQG + +I +D Q +E
Sbjct 276 QFSIPACVLNSELPVHSRCHIISQFNQGFYNYIIASDEQGLES 318
> mmu:52513 Ddx56, 2600001H07Rik, D11Ertd619e, Noh61; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 56 (EC:3.6.4.13); K14810 ATP-dependent
RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Length=546
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLLF+FGFE++ K LL LP R YQ L+SAT N ++ L+ L+LH P+ +K+ E +
Sbjct 169 DLLFSFGFEDELKSLLCHLP----RIYQAFLMSATFNEDVQTLKELVLHNPVTLKLQESQ 224
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D + +F TE +K+L+ YA L+L L+ K L+F + Y LRLFL+
Sbjct 225 LPGPDQ-----LQQFQVVCETEEDKFLLLYALLKLSLIRGKALLFVNTLERGYRLRLFLE 279
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADGESSGSAEASA 180
+F I S VL+ LP+ +R I FNQGL D +I D + + P G+ G
Sbjct 280 QFSIPSCVLNGELPLRSRCHIISQFNQGLYDCVIATDAEIL---GPQVKGKRRG------ 330
Query 181 PTPSTGKRRREDQTKAKDSEFAGHRGLDMQGVA 213
R KA D E RG+D V+
Sbjct 331 --------RGSKGNKASDPESGVARGIDFHHVS 355
> hsa:54606 DDX56, DDX21, DDX26, NOH61; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 56 (EC:3.6.4.13); K14810 ATP-dependent RNA
helicase DDX56/DBP9 [EC:3.6.4.13]
Length=547
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLLF+FGFE + K LL LP R YQ L+SAT N ++ L+ L+LH P+ +K+ E +
Sbjct 169 DLLFSFGFEEELKSLLCHLP----RIYQAFLMSATFNEDVQALKELILHNPVTLKLQESQ 224
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D + +F TE +K+L+ YA L+L L+ K L+F + Y LRLFL+
Sbjct 225 LPGPDQ-----LQQFQVVCETEEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLE 279
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADGESSGSAEASA 180
+F I + VL+ LP+ +R I FNQG D +I D + +
Sbjct 280 QFSIPTCVLNGELPLRSRCHIISQFNQGFYDCVIATDAEVLGA----------------- 322
Query 181 PTPSTGKRRREDQT--KAKDSEFAGHRGLDMQGVA 213
P GKRR KA D E RG+D V+
Sbjct 323 --PVKGKRRGRGPKGDKASDPEAGVARGIDFHHVS 355
> sce:YLR276C DBP9; ATP-dependent RNA helicase of the DEAD-box
family involved in biogenesis of the 60S ribosomal subunit
(EC:3.6.1.-); K14810 ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Length=594
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ FG+++D ++ + LP ++ QT L+SAT N ++ L+ P I+K +EE
Sbjct 182 DLVLTFGYQDDLNKIGEYLP--LKKNLQTFLMSATLNDDIQALKQKFCRSPAILKFNDEE 239
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+ + ++Y +V +E +K+L+ Y +L L+ K L+F ++ Y L+L ++
Sbjct 240 INKNQNK----LLQYYVKV-SEFDKFLLCYVIFKLNLIKGKTLIFVNNIDRGYRLKLVME 294
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILI-TNDGQF--------MEGKNPPADGE 171
+FGI S +L+ LPV +R+ + FN+ + +LI T+D ++ EG N E
Sbjct 295 QFGIKSCILNSELPVNSRQHIVDQFNKNVYQLLIATDDTEYIKEEDDEIEEGHNTENQEE 354
Query 172 SSGSAEASAPTPSTGKRRREDQTKAKDSEFAGHRGLDMQGVA 213
S E P +++ KD E+ RG+D + VA
Sbjct 355 KSLEGE---PENDKKPSKKKKVQVKKDKEYGVSRGVDFKNVA 393
> bbo:BBOV_IV002200 21.m02820; DEAD/DEAH box helicase
Length=530
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 9/158 (5%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARH-YQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
DLLF FGF+++T +L ++L + R +QTIL+SAT + + L +L+L+KPL VE
Sbjct 169 DLLFEFGFKSETLQLAEILRNFGRRKSFQTILLSATLDQHVQNLANLILYKPLF---VEA 225
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
E + G CI EFY ++ E +K L YA +++ +P L+F Y ++ L
Sbjct 226 EYKPSMG----CIKEFYVRL-NEDDKLLFVYALIKMETLPYPALIFTNSDERAYKIKTHL 280
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ + S LS L R+ + +FNQG I++LI D
Sbjct 281 AKLSVESRALSRLLSPRMRQALLTSFNQGTINVLIVAD 318
> xla:414578 ddx56, MGC81243; DEAD (Asp-Glu-Ala-Asp) box polypeptide
56; K14810 ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Length=552
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 10/159 (6%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+F+FGFE D K LL LP +Q+ L+SAT + ++ L+ L+LH P+ +K+ EE
Sbjct 164 DLIFSFGFEEDLKNLLCQLPKI----FQSFLMSATFSEDVQALKELVLHNPVTLKL--EE 217
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D S +++++ Q E +K+L+ Y L+L LV K ++F +V Y L+LFL+
Sbjct 218 SQLPDSSQ---LTQYHIQC-EEEDKFLLLYTLLKLSLVRGKTIIFVNEVDRSYRLKLFLE 273
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQ 159
+F I + VL+ LP+ +R I FNQG D +I D Q
Sbjct 274 QFSIPACVLNSELPIHSRCHIISQFNQGFYDYIIATDEQ 312
> ath:AT4G34910 DEAD/DEAH box helicase, putative (RH16); K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Length=626
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 18/213 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL ++G+E++ + + ++P R Q +L+SAT + ++ +L+ L+LH P+++ + E+
Sbjct 210 DLLLSYGYEDNLRSVTSIIP----RRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTED- 264
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+ + + S + +F+ + +K L A L+L +V K L+F + + L+LFL+
Sbjct 265 -NDKEEAVPSNVQQFWISCSAQ-DKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLE 322
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILI-TNDGQFMEGKNPPADGESSGSAEAS 179
+FGI S +L+ LP +R ++ FN GL D LI T+D + + A GE++ + +
Sbjct 323 KFGIKSAILNGELPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKN 382
Query 180 APTPSTGKRRREDQTKAKDSEFAGHRGLDMQGV 212
D+EF RG+D + V
Sbjct 383 NKR----------SKPKLDAEFGVVRGIDFKKV 405
> cel:C24H12.4 hypothetical protein; K14810 ATP-dependent RNA
helicase DDX56/DBP9 [EC:3.6.4.13]
Length=634
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLI-IKIVEE 59
DLL +FG+E + ++ LP T YQ ++ SAT +++ L+ L + P+I IK+ E
Sbjct 247 DLLLSFGYEEEMIKIRSKLPPT----YQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEG 302
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
+ ++D ++++ ++ E++ + A +L L+ + ++F + Y L L L
Sbjct 303 DLPNSDQ-----LTQYQLTCGSDEERFAILVAMFKLKLIVGRSILFVNTIDRCYKLMLIL 357
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADGESSGSAEAS 179
FG+ S +L+ +P +R I FN+G I+I +D +G E +G ++
Sbjct 358 RVFGLKSCILNSAMPANSRCHVINQFNEGSYQIVIASDVSDADGSK--LKEEIAGKSDEK 415
Query 180 APTPSTGKRRREDQTKAKDSEFAGHRGLDMQGVA 213
P +++ + +K D E RG+D V+
Sbjct 416 ---PEKDEKKGKKASKL-DKESGVSRGIDFHHVS 445
> tpv:TP03_0433 ATP-dependent RNA helicase
Length=566
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAA-RHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
DLLF FG++ND +L+++L +++ + +Q++L+SAT + E+ + +L+L+KP+ I +
Sbjct 170 DLLFEFGYKNDMVKLIEILRNSSKFKSFQSVLLSATLDPEIKNIANLLLYKPIYIDV--- 226
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
+ ++Y V E K L Y L++ +P ++F + Y L FL
Sbjct 227 ----PYTPKLGNVKQYYVLV-NEDNKLLTLYLLLKMECIPYGSIIFVNTNKTGYYLYCFL 281
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLID--ILITNDGQ 159
+ + ++S L R +Q+FNQGL+ ILI +D +
Sbjct 282 RKLCLDINIISKLLSPKLRHTILQSFNQGLLGSLILIDDDSE 323
> pfa:PFL2010c DEAD/DEAH box helicase, putative; K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=878
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 33/187 (17%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPL-------- 52
D+L F++ K L LP + YQ ++ SAT + + L LH P+
Sbjct 271 DVLHTQEFQSYLKTLTSYLPKKFNKKYQIVMASATLKRNILEKTKLFLHNPIYVSHEQKN 330
Query 53 ----------------IIKIVEEEGS---HADGSAASCISE------FYFQVPTEAEKWL 87
+I EE G H +G+ + FY+ E K++
Sbjct 331 ESSFEKKKNKTNNTNSVIMKREEAGKNNIHDEGNEGKTKYQKFTGKAFYYVYKEELIKYI 390
Query 88 VAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQ 147
Y +++ ++P K ++F + Y +++FL ++S +L+P P+ R+ I AFN
Sbjct 391 YLYNLIKIKIIPYKSIIFTTTIHDAYKIKIFLTYLNVSSSILNPNHPILIRQNIISAFNN 450
Query 148 GLIDILI 154
LI
Sbjct 451 SKFHFLI 457
> cpv:cgd7_3940 eIF4A-1; eukaryotic translation initiation factor
4A-1; RNA SFII helicase ; K13025 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=396
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D +F +GF+ + + LP QT+LVSAT ++ + + PL I + +EE
Sbjct 175 DEMFDYGFKTQVYDIYKYLPP----RIQTVLVSATLPDDILVMAQKFMRNPLQILVPKEE 230
Query 61 GSHADGSAASCISEFYFQVPTEAEKW-LVAYAFLRLGLVPLKCLVFCKDVSSVYAL--RL 117
S I +++ QV E EKW L L + ++FC + V L ++
Sbjct 231 VS------LDKIRQYHVQV--EEEKWKFETLCDLYDTLTVTQSIIFCNTKNKVEWLSKKM 282
Query 118 FLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ F ++ + LP RE+ ++ F +G +LIT D
Sbjct 283 MENHFTVS--FVHGDLPQVTREEILREFREGKTRVLITTD 320
> xla:414715 hypothetical protein MGC83105; K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=638
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHK-PLIIKIVEE 59
D + GFE + K+++ LLP + QT+L SATQ ++ L + + K PL + +
Sbjct 302 DRILEVGFEQEMKQIINLLP----KRRQTMLFSATQTRKVEDLARISMKKEPLYVGV--- 354
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYALR 116
H + + + + Y P+E +++L+ + FL+ K +VF C V Y L
Sbjct 355 -DDHKETATVDGLEQGYVVCPSE-KRFLLLFTFLKKNRKK-KMMVFFSSCMSVKYHYELL 411
Query 117 LFLD 120
++D
Sbjct 412 NYID 415
> tgo:TGME49_112990 ATP-dependent RNA helicase, putative (EC:5.99.1.3);
K13179 ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=569
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE + +LQ+LP T QT L SATQ+ +++ L L L KP+ +++ +
Sbjct 242 DRILQIGFEEEMNAILQMLPQTR----QTCLFSATQSAKVADLARLSLKKPVFVEVKDTV 297
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
+ I + Y P E E++L+ + FL+ K +VF SV
Sbjct 298 AT------VRGIQQGYVVCPAE-ERFLLLFTFLKKNREK-KIMVFFSSCMSV 341
> tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=598
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GF+++ K + S +QT+L SAT ++ + L L P+++ +
Sbjct 368 DRIIDLGFDSEIKSIF----SHVNNQHQTLLFSATIPSKIQEFAKLTLTNPIVVNV---- 419
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
GSA + + VP E++ ++ + P L+FC++ + V + +L
Sbjct 420 --GVSGSANKNVKQVVVAVPKESKLPMLLQCLKK---TPPPVLIFCENKADVEIINEYLI 474
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
G+ + + L R + I F D+LI D
Sbjct 475 LKGVEASAIHGGLSQEERIESISDFKNHKKDVLIGTD 511
> cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA
helicase DDX27 [EC:3.6.4.13]
Length=763
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + F + L++L A++ QT+L SAT E+ +L + L KP+ I I E
Sbjct 328 DRMLEEAFRDQMNELIRL----CAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINEN- 382
Query 61 GSHADGSAASCISEFY-FQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
+A EF + E ++ + A + +VF + +++ L
Sbjct 383 ----TDTALKLRQEFIRIRAGRETDREAMVAALVTRTF-QTNTIVFVRTKKDCQRMQILL 437
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
GI G + +L R + + F + ID+L++ D
Sbjct 438 GLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTD 475
> eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase;
K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Length=454
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GF +D +R+L LP+ Q +L SAT + ++ L +LH PL I++
Sbjct 159 DRMLDMGFIHDIRRVLTKLPAK----RQNLLFSATFSDDIKALAEKLLHNPLEIEVARR- 213
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+A+ +++ V + ++ L+++ + + LVF + L L+
Sbjct 214 -----NTASDQVTQHVHFVDKKRKRELLSHMIGKGNW--QQVLVFTRTKHGANHLAEQLN 266
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ GI S + AR + + F G I +L+ D
Sbjct 267 KDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATD 303
> cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member
(ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=730
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 29/178 (16%)
Query 1 DLLFAFGFENDTKRLLQLLP---------------------STAARHYQTILVSATQNHE 39
D + GFE D +++L+ +P ST ++ QT++ +AT +
Sbjct 462 DRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSA 521
Query 40 LSQLQHLMLHKPLIIKIVEEEGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVP 99
+ +L L +P ++ I GS G + + + VP + ++ + P
Sbjct 522 IERLARQYLRRPAVVHI----GSA--GKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPP 575
Query 100 LKCLVFCKDVSSVYALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ ++F L L + G VL RE +QA +G DIL+ D
Sbjct 576 I--IIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATD 631
> sce:YLL008W DRS1; Drs1p (EC:3.6.1.-); K13181 ATP-dependent RNA
helicase DDX27 [EC:3.6.4.13]
Length=752
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GF+++ ++ LLPS + Q +L SAT N ++ L L L KP+ I I
Sbjct 388 DRMLEEGFQDELNEIMGLLPS----NRQNLLFSATMNSKIKSLVSLSLKKPVRIMI---- 439
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPL---KCLVFCKDVSSVYALRL 117
+A EF + K + + +R L P + +VF + + LR+
Sbjct 440 -DPPKKAATKLTQEFVRIRKRDHLKPALLFNLIR-KLDPTGQKRIVVFVARKETAHRLRI 497
Query 118 FLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G++ G L +L R + F + +LI D
Sbjct 498 IMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTD 537
> hsa:8886 DDX18, FLJ33908, MrDb; DEAD (Asp-Glu-Ala-Asp) box polypeptide
18 (EC:3.6.4.13); K13179 ATP-dependent RNA helicase
DDX18/HAS1 [EC:3.6.4.13]
Length=670
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHK-PLIIKIVEE 59
D + GFE + K++++LLP+ QT+L SATQ ++ L + L K PL + + ++
Sbjct 336 DRILDVGFEEELKQIIKLLPT----RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDD 391
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYALR 116
+ + + + + Y P+E +++L+ + FL+ K +VF C V Y L
Sbjct 392 KAN----ATVDGLEQGYVVCPSE-KRFLLLFTFLKKNRKK-KLMVFFSSCMSVKYHYELL 445
Query 117 LFLD 120
++D
Sbjct 446 NYID 449
> mmu:66942 Ddx18, 2310005B10Rik, MGC117904; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 18 (EC:3.6.4.13); K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=660
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHK-PLIIKIVEE 59
D + GFE + K++++LLP+ QT+L SATQ ++ L + L K PL + + ++
Sbjct 326 DRILDVGFEEELKQIIKLLPA----RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDD 381
Query 60 -EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYAL 115
E + DG + + Y P+E +++L+ + FL+ K +VF C V Y L
Sbjct 382 KEVATVDG-----LEQGYVVCPSE-KRFLLLFTFLKKNRKK-KVMVFFSSCMSVKYHYEL 434
Query 116 RLFLD 120
++D
Sbjct 435 LNYID 439
> dre:321127 ddx18, cb155, sb:cb155, wu:fa19d11; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 18 (EC:3.6.4.13); K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=653
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHK-PLIIKIVEE 59
D + GFE + K++++LLP + Q++L SATQ ++ L + L K PL + +
Sbjct 318 DRILEVGFEEELKQIIKLLP----KKRQSMLFSATQTRKVEDLARISLKKEPLYVGV--- 370
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYALR 116
+ D + + + Y P+E +++L+ + FL+ K +VF C V Y L
Sbjct 371 -DDNKDTATVEGLEQGYVVCPSE-KRFLLLFTFLKKNRKK-KLMVFFSSCMSVKFHYELL 427
Query 117 LFLD 120
++D
Sbjct 428 NYID 431
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query 1 DLLFAFGFENDT-KRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D + GFE K LL + P QT++ SAT H + +L L +P+I+ +
Sbjct 399 DKMLDMGFEPQIMKILLDVRPD-----RQTVMTSATWPHSVHRLAQSYLKEPMIVYV--- 450
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFC--KDVSSVYALRL 117
D A S + + V TE EKW FL+ K +VF K V+ + L
Sbjct 451 --GTLDLVAVSSVKQNII-VTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDL 507
Query 118 FLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
L + S L RE+ ++ F G + ILI D
Sbjct 508 ILGNISVES--LHGDREQRDREKALENFKTGKVRILIATD 545
> pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=665
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D L GFE + + L + QT+L SAT ++ + L P+II +
Sbjct 383 DRLIDLGFEEEVRNTLDHF----SNQRQTLLFSATMPKKIQEFAKSTLVNPIIINV---- 434
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
G A + + +V E++ ++Y L L+FC++ V + +L
Sbjct 435 -----GRAGAANLDVIQEVEYVKEEFKLSYLLEVLQKTGPPVLIFCENKKDVDDVHEYLL 489
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
G+ + + L + R++ I F +G DIL+ D
Sbjct 490 LKGVNAVAIHGNLGQSERQEAINLFREGKKDILVGTD 526
> sce:YMR290C HAS1; ATP-dependent RNA helicase; localizes to both
the nuclear periphery and nucleolus; highly enriched in
nuclear pore complex fractions; constituent of 66S pre-ribosomal
particles (EC:3.6.1.-); K13179 ATP-dependent RNA helicase
DDX18/HAS1 [EC:3.6.4.13]
Length=505
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHK-PLIIKIVEE 59
D + GFE++ ++++++LP+ Q++L SATQ ++ L + L PL I +V E
Sbjct 199 DRILEIGFEDEMRQIIKILPN---EDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPE 255
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
D S A + + Y ++ +++L+ ++FL+ K +VF +SV
Sbjct 256 ----TDNSTADGLEQGYVVCDSD-KRFLLLFSFLKRNQKK-KIIVFLSSCNSV 302
> tpv:TP04_0821 ATP-dependent RNA helicase; K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=529
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE + ++++LLP ++ QT L SAT + L L L P+ ++++ E
Sbjct 213 DRILQIGFEQEMNQIIKLLP----KNRQTSLFSATHTSNVEDLARLSLKAPVFLEVMSNE 268
Query 61 GSHADGSAASCISEFYFQVPTEAE-KWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
+ G + + Y V EAE ++++ Y FL+ L K +VF +SV
Sbjct 269 SATVSG-----LEQGY--VVCEAENRFMLLYTFLKKNL-DRKVMVFFSSCNSV 313
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query 1 DLLFAFGFENDTKRLL-QLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D +F GFE + ++ Q+ P QT+L SAT ++ +L +L P+ + + E
Sbjct 385 DRMFDLGFEPQVRSIVGQIRPDR-----QTLLFSATMPWKVEKLAREILSDPIRVTVGEV 439
Query 60 EGSHADGSAASCISEFYFQVPTEAEK--WLVAY--AFLRLGLVPLKCLVFCKDVSSVYAL 115
G A I++ +P++AEK WL+ + G V LVF ++V +
Sbjct 440 ------GMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDV----LVFASKKATVDEI 489
Query 116 --RLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+L L+ F +A+ L A+R + +Q F G+ +LI D
Sbjct 490 EAQLTLNSFKVAA--LHGDKDQASRMETLQKFKSGVHHVLIATD 531
> bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=783
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 11/157 (7%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D LF GF D R+L LP QT+LVSAT EL++ + L P+I ++ ++
Sbjct 181 DKLFEMGFMPDVYRILSRLPE----KRQTMLVSATLPSELTEFVNFGLRNPVIAQVDKDM 236
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+ E F +K LR + +VF V R L
Sbjct 237 QINEQ-------LELRFIYSRTEDKVATLCRLLRNSNDTERTIVFVSTKHHVEFFRALLA 289
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
GI + ++ + AR Q+ F +L+ D
Sbjct 290 ATGITVSAVYGSMDMTARSHQMGLFKSLKTRVLVVTD 326
> tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=479
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D L + F+ + LL+ + S A R QT+L SAT ++S+LQ L KP+ +++
Sbjct 204 DRLLSLDFDAALQVLLEHVGSPAER--QTMLFSATMTTKVSKLQKASLKKPVKLEV---- 257
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
++ AS + + + VP + + +A A L L P +VF ++ LFL
Sbjct 258 --NSKYDVASHLQQHFLLVPFKLKHTHLAAALLHLS--PSSVIVFTNTCANARKTALFLR 313
Query 121 RFGIASGVL 129
G S L
Sbjct 314 HLGFQSVCL 322
> tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=657
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE + + +L + QT+L SAT ++ + L PL++ +
Sbjct 374 DRMVDMGFEEEVRNVL----DSFGHQRQTLLFSATMPRKIQEFAKSALIDPLVVNV---- 425
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
G A + + +V ++ + Y L L+FC++ V ++ +L
Sbjct 426 -----GRAGAANLDVVQEVEYVKQENKLPYLLHCLQKTAPPVLIFCENKKDVDDIQEYLL 480
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
G+ + + L R + ++AF +G D+L+ D
Sbjct 481 LKGVDAAAVHGGLAQEERSEAVRAFREGRKDVLVGTD 517
> dre:445387 ddx51, MGC111800, zgc:111800; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 51 (EC:3.6.4.13); K14807 ATP-dependent RNA
helicase DDX51/DBP6 [EC:3.6.4.13]
Length=652
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query 28 QTILVSATQNHELSQLQHLMLHKPLIIKIVEEEGSHADGSAAS--------CISEFYFQV 79
Q +L SAT +LQ L LH+P ++ S D A S +SE+Y
Sbjct 416 QKLLFSATLTQNPEKLQLLDLHQP---RLFSSTHSLTDNPAQSQDTFHFPQGLSEYYVPC 472
Query 80 PTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLDRF-GIASGVLSPTLPVAAR 138
+ ++ + LRL P C F + L L + F G+ S L R
Sbjct 473 TFSKKPLIILHFLLRLKFSPALC--FTNSREGAHRLYLLVKLFGGVEVAEFSSKLSPGER 530
Query 139 EQQIQAFNQGLIDILITNDG 158
++ ++ F +G I +LI+ D
Sbjct 531 QKTLKDFEKGKIPLLISTDA 550
> hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box polypeptide
41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=622
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE D + + QT+L SAT ++ L KP+ I +
Sbjct 347 DRMIDMGFEGDIRTIFSYFKG----QRQTLLFSATMPKKIQNFAKSALVKPVTINV---- 398
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
G A + + +V E+ + Y L P L+F + + V A+ +L
Sbjct 399 -----GRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLL 453
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
G+ + + R + I+AF +G D+L+ D
Sbjct 454 LKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATD 490
> mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116
ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=622
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE D + + QT+L SAT ++ L KP+ I +
Sbjct 347 DRMIDMGFEGDIRTIFSYFKG----QRQTLLFSATMPKKIQNFAKSALVKPVTINV---- 398
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
G A + + +V E+ + Y L P L+F + + V A+ +L
Sbjct 399 -----GRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLL 453
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
G+ + + R + I+AF +G D+L+ D
Sbjct 454 LKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATD 490
> tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.99.1.3);
K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=983
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 14/159 (8%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D +F G++ L LP++ Q +LVSAT +L L L P +++ E+E
Sbjct 179 DRIFELGWKEQLSMLFAALPASK----QVVLVSATLPGDLVNFARLGLRDPEFVRL-EKE 233
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLK--CLVFCKDVSSVYALRLF 118
+ +D +F F A + + FL + K LVF L+ F
Sbjct 234 CTLSD----DLHMQFLF---VRAAQKVPTLLFLLKQSIQKKEQVLVFASTRHQATFLQCF 286
Query 119 LDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+R S V+ + R Q + AF +G I +L+ D
Sbjct 287 CERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTD 325
> ath:AT5G26742 emb1138 (embryo defective 1138); ATP binding /
ATP-dependent helicase/ RNA binding / helicase/ nucleic acid
binding / zinc ion binding
Length=748
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + A GFE + +L+ LP+ Q++L SAT + +L L PL I +V ++
Sbjct 262 DQMLAVGFEEAVESILENLPT----KRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQ 317
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D A I + Y T K + + + K +VF + + L L
Sbjct 318 ----DEKLAEGI-KLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALS 372
Query 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
IA+ L + RE+ + AF QG +L+ D
Sbjct 373 N-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 408
> ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181
ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=789
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D L GF + L++L P + QT+L SAT E+ +L L L+KPL +
Sbjct 323 DRLLQTGFATEITELVRLCP----KRRQTMLFSATMTEEVKELVKLSLNKPLRL------ 372
Query 61 GSHADGSAAS--CISEFYFQV--PTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALR 116
AD SA ++E ++ EA + V + K ++F + + L+
Sbjct 373 --SADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKS-KVIIFSGTKQAAHRLK 429
Query 117 LFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G+ + L L A R ++ F + +D LI D
Sbjct 430 ILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATD 470
> pfa:PF13_0037 DEAD box helicase, putative; K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=630
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLI-IKIVEE 59
D L + G+END RLL LPS + IL+SAT + L +++ M I + V++
Sbjct 311 DQLLSTGYENDIHRLLTYLPSNR----RNILLSATLGYNLDEIRKKMCKSDYIYLNCVKD 366
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF--CKDVSSVYALRL 117
H + F+ + T + + +RL K +VF +S YA +
Sbjct 367 ISKHTSDQLIQYVL-FHKAIDTTIILYNLLIEHMRLNQFTYKIIVFFPTARATSFYA-QF 424
Query 118 FLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
F+++ I+ + +A R+ F+ + IL T+D
Sbjct 425 FINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFTSD 464
> eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-dependent
RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Length=629
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GF D + ++ +P +QT L SAT + ++ + +P ++I
Sbjct 159 DEMLRMGFIEDVETIMAQIPEG----HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSV 214
Query 61 GSHADGSAASCISEFYFQV----PTEA-EKWLVAYAFLRLGLVPLKCLVFCKDVSSVYAL 115
+ D IS+ Y+ V EA ++L A F ++F + ++ +
Sbjct 215 TTRPD------ISQSYWTVWGMRKNEALVRFLEAEDFD-------AAIIFVRTKNATLEV 261
Query 116 RLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
L+R G S L+ + A REQ ++ G +DILI D
Sbjct 262 AEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 303
> xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polypeptide
54; K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=846
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D LF GF + ++ LP T QT+L SAT L + L +P++I++
Sbjct 229 DRLFEMGFAEQLQEIISRLPET----RQTLLFSATLPKMLLEFARAGLTEPVLIRL---- 280
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPL-KCLVFCKDVSSVYALRLFL 119
D + + +F V E +K V LR + P + ++F LR L
Sbjct 281 --DVDTKLSDQLKLSFFNVRVE-DKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYLRELL 337
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
D GI + +L AR+ + F G + L+ D
Sbjct 338 DMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTD 375
> hsa:1662 DDX10, HRH-J8; DEAD (Asp-Glu-Ala-Asp) box polypeptide
10 (EC:3.6.4.13); K14776 ATP-dependent RNA helicase DDX10/DBP4
[EC:3.6.4.13]
Length=875
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GF + +++ LP + QT+L SATQ + L L L P + + E+
Sbjct 225 DRILDMGFADTMNAVIENLP----KKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEK- 279
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYALRL 117
A S + + + Y V +K V Y+FLR L K +VF CK+V +Y R+
Sbjct 280 ---AKYSTPATLEQNYI-VCELQQKISVLYSFLRSHLKK-KSIVFFSSCKEVQYLY--RV 332
Query 118 FLD-RFGIASGVLSPTLPVAAREQQIQ 143
F R G++ L + R+QQ++
Sbjct 333 FCRLRPGVS------ILALHGRQQQMR 353
> xla:398180 ddx25, deadsouth, grth; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 25 (EC:3.6.4.13)
Length=483
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query 7 GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEEGSHADG 66
G + + R+ + +P + Q +L SAT + ++ P IIK+ +EE + +
Sbjct 257 GHSDHSVRVKRSMPKSC----QMLLFSATFEDSVWAFAERIVPDPNIIKLKKEELTLKN- 311
Query 67 SAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLDRFGIAS 126
I +FY Q + +K+ A L + + +VFC+ L L G
Sbjct 312 -----IQQFYDQCENKEQKY-SALCNLYGVITIAQAIVFCQTRKIASWLSQKLSDDGHQV 365
Query 127 GVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+LS LPV R IQ F +G +L+T +
Sbjct 366 ALLSGELPVYDRADMIQRFREGREKVLVTTN 396
> mmu:30959 Ddx25, AW047046, GRTH; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 25 (EC:3.6.4.13)
Length=484
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query 7 GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEEGSHADG 66
GF + + R+ + LPS Q +L SAT + Q ++ P +IK+ +EE + +
Sbjct 258 GFSDQSIRIQRALPSEC----QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNN- 312
Query 67 SAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLDRFGIAS 126
I ++Y K+ A + G+ + ++FC+ + L + + + G
Sbjct 313 -----IRQYYVLCENRKGKYQ-ALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQV 366
Query 127 GVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+LS L V R IQ F G +LIT +
Sbjct 367 SLLSGELTVEQRASIIQRFRDGKEKVLITTN 397
> mmu:13680 Ddx19a, DBP5, Ddx19, Eif4a-rs1; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 19a (EC:3.6.4.13)
Length=478
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query 1 DLLFAF-GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D++ A G ++ + R+ ++LP R+ Q +L SAT + + ++ P IIK+ E
Sbjct 244 DVMIATQGHQDQSIRIQRMLP----RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE 299
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
E + I ++Y EK+ A L + + ++FC + L L
Sbjct 300 EET------LDTIKQYYVLCNNREEKFQ-ALCNLYGAITIAQAMIFCHTRKTASWLAAEL 352
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G +LS + V R I+ F +G +L+T +
Sbjct 353 SKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 390
> cpv:cgd3_3920 DEAD/DEAH box ATP-dependent RNA helicase ; K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=519
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + GFE + ++++LLP + QT L SATQ +++ L L L P+++ E
Sbjct 183 DRILEIGFEEEMNQIIKLLP----KERQTSLFSATQTTKVADLVRLSLKNPVLV----ES 234
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLR 94
+ + + S + + Y + +++L+ Y FL+
Sbjct 235 KNTSSIATVSGLEQGYV-IAQANQRFLLLYTFLK 267
> cpv:cgd6_4830 Drs1p, eIF4a-1-family RNA SFII helicase ; K13181
ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=573
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVE-E 59
D L GF + +L+ ++R QT+L SAT + ++ L L L+ P + V +
Sbjct 200 DRLLDMGFRQECLEILKY----SSRTRQTMLFSATLSRSVTDLALLALNNPCKVSTVGLK 255
Query 60 EGSHADGSA-----------ASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKD 108
G + GS+ +S + + + ++ E E+ + L + + +VF +
Sbjct 256 SGIKSVGSSGESELLSITGLSSTLEQEFLEITKEEEREGALFYILN-KIFTKRVIVFFQT 314
Query 109 VSSVYALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ + + FG++S L LP R + F G +DIL ++
Sbjct 315 KKEAHRCAILGNIFGLSSTELHGFLPQEKRLENFSKFKSGQVDILFASE 363
> mmu:234733 Ddx19b, 2810457M08Rik, 4921519L13Rik, AW260119; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 19b (EC:3.6.4.13)
Length=494
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query 1 DLLFAF-GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D++ A G ++ + R+ ++LP R+ Q +L SAT + + ++ P IIK+ E
Sbjct 260 DVMIATQGHQDQSIRIQRMLP----RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE 315
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
E I ++Y EK+ A L + + ++FC + L L
Sbjct 316 E------ETLDTIKQYYVLCNNREEKFQ-ALCNLYGAITIAQAMIFCHTRKTASWLAAEL 368
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G +LS + V R I+ F +G +L+T +
Sbjct 369 SKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 406
> hsa:11269 DDX19B, DBP5, DDX19, RNAh; DEAD (Asp-Glu-Ala-As) box
polypeptide 19B (EC:3.6.4.13)
Length=370
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query 1 DLLFAF-GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D++ A G ++ + R+ ++LP R+ Q +L SAT + + ++ P +IK+ E
Sbjct 136 DVMIATQGHQDQSIRIQRMLP----RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 191
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
E I ++Y + EK+ A L + + ++FC + L L
Sbjct 192 E------ETLDTIKQYYVLCSSRDEKFQ-ALCNLYGAITIAQAMIFCHTRKTASWLAAEL 244
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G +LS + V R I+ F +G +L+T +
Sbjct 245 SKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 282
> hsa:55308 DDX19A, DDX19-DDX19L, DDX19L, DKFZp686C21137, FLJ11126;
DEAD (Asp-Glu-Ala-As) box polypeptide 19A (EC:3.6.4.13);
K01529 [EC:3.6.1.-]
Length=478
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query 1 DLLFAF-GFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE 59
D++ A G ++ + R+ ++LP R+ Q +L SAT + + ++ P +IK+ E
Sbjct 244 DVMIATQGHQDQSIRIQRMLP----RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 299
Query 60 EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFL 119
E + I ++Y + EK+ A L + + ++FC + L L
Sbjct 300 EET------LDTIKQYYVLCSSRDEKFQ-ALCNLYGAITIAQAMIFCHTRKTASWLAAEL 352
Query 120 DRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
+ G +LS + V R I+ F +G +L+T +
Sbjct 353 SKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 390
> ath:AT5G65900 DEAD/DEAH box helicase, putative; K13179 ATP-dependent
RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Length=633
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
D + FE D K++L LLP T QT L SATQ+ ++ L + L P+ I + +E
Sbjct 311 DRILEQNFEEDLKKILNLLPKTR----QTSLFSATQSAKVEDLARVSLTSPVYIDV--DE 364
Query 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVF---CKDVSSVYALRL 117
G + + Y VP+ A + L FL+ K +VF CK S+ + L
Sbjct 365 GRKE--VTNEGLEQGYCVVPS-AMRLLFLLTFLKRFQGKKKIMVFFSTCK--STKFHAEL 419
Query 118 F 118
F
Sbjct 420 F 420
Lambda K H
0.319 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6752111100
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40