bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1443_orf2
Length=298
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_003220 ATP-dependent RNA helicase, putative 111 3e-24
mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05... 102 1e-21
hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Gl... 101 4e-21
xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypep... 100 7e-21
dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-As... 98.6 2e-20
ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/ ... 93.6 8e-19
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 90.5 8e-18
ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-depe... 90.1 8e-18
ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594 A... 89.4 1e-17
cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA he... 87.8 5e-17
ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-depe... 87.4 5e-17
ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-depend... 86.3 1e-16
ath:AT3G06480 DEAD box RNA helicase, putative 85.5 2e-16
sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 85.1 3e-16
cel:F57B9.6 inf-1; INitiation Factor family member (inf-1); K0... 84.7 3e-16
mmu:100504817 eukaryotic initiation factor 4A-III-like; K13025... 84.0 6e-16
sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA... 83.6 8e-16
mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp... 83.6 8e-16
mmu:668137 Gm8994, B020013A22Rik, EG668137; predicted gene 899... 83.2 9e-16
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 83.2 1e-15
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 83.2 1e-15
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 82.8 1e-15
cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA he... 82.8 1e-15
hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862, NM... 82.4 2e-15
mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF... 82.4 2e-15
mmu:434050 Gm5576, EG434050; predicted pseudogene 5576; K13025... 82.4 2e-15
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 82.4 2e-15
xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp2... 82.0 2e-15
dre:100330671 eukaryotic translation initiation factor 4A-like... 82.0 3e-15
cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA ... 81.6 3e-15
sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-bo... 81.3 4e-15
tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1... 81.3 4e-15
tgo:TGME49_005540 RNA helicase, putative 81.3 5e-15
pfa:PF10_0309 DEAD/DEAH box helicase, putative; K11594 ATP-dep... 80.5 6e-15
sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-depende... 80.5 6e-15
ath:AT1G31970 STRS1; STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP... 79.0 2e-14
tpv:TP02_0123 RNA helicase-1; K03257 translation initiation fa... 79.0 2e-14
tgo:TGME49_063820 ATP-dependent RNA helicase, putative (EC:2.7... 79.0 2e-14
dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; euka... 78.6 3e-14
cel:Y71H2AM.19 hypothetical protein; K11594 ATP-dependent RNA ... 78.2 3e-14
xla:398188 ddx21, MGC130693; DEAD (Asp-Glu-Ala-Asp) box polype... 78.2 4e-14
sce:YHR065C RRP3; Protein involved in rRNA processing; require... 77.8 5e-14
eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-depende... 77.4 6e-14
tgo:TGME49_050770 eukaryotic translation initiation factor 4A ... 77.4 6e-14
xla:398189 RNA helicase II/Gu 77.0 7e-14
bbo:BBOV_III010250 17.m07889; eukaryotic translation initiatio... 77.0 7e-14
tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.... 77.0 8e-14
ath:AT1G72730 eukaryotic translation initiation factor 4A, put... 77.0 9e-14
ath:AT3G19760 eukaryotic translation initiation factor 4A, put... 76.6 9e-14
sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-... 76.6 1e-13
> tgo:TGME49_003220 ATP-dependent RNA helicase, putative
Length=774
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 12/119 (10%)
Query 34 KYVAILHGGMQQGERLAVMRRMQHHFLG------------DSGPARTPLVLVATDVAARG 81
++V ++HGG+ Q ERLA +RR+ H L D +PLVLVATDVAARG
Sbjct 652 EHVTVVHGGLNQTERLAAVRRLHRHILKAPPPPVSPRPLLDVSSLISPLVLVATDVAARG 711
Query 82 LDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMET 140
LDFP LSLVV YDAP + EVYVHRIGRAGRAGR G + +L T+ EKR AA +VE ME
Sbjct 712 LDFPAGLSLVVSYDAPQEGEVYVHRIGRAGRAGRRGQSFALLTRTEKRAAALLVEAMEV 770
> mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05Rik,
RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase
DDX42 [EC:3.6.4.13]
Length=929
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query 21 SSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAAR 80
+++ L N Q + +LHG M Q ER V + D P VLVATDVAAR
Sbjct 510 NAEELASNLKQEGHNLGLLHGDMDQSERNKV--------ISDFKKKDIP-VLVATDVAAR 560
Query 81 GLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMET 140
GLD P ++ V+ YD D + + HRIGR GRAG G+A +L T ++ A +V +E
Sbjct 561 GLDIP-SIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEG 619
Query 141 CGQSVPRSLVEFAMQFPPFREARLSGLRVVWQGGKVGRELRQQQNTSFGGLGFDT--GCQ 198
Q V + L++ AMQ FR++R ++GGK G++L N GGLG+ G
Sbjct 620 ANQHVSKELLDLAMQNAWFRKSR-------FKGGK-GKKL----NIGGGGLGYRERPGLG 667
Query 199 VEPIDKSLASNAPSIAEAAAAAAAAAAAAAAAARA 233
E D+ +N S EA + A A +A
Sbjct 668 SENSDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKA 702
> hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.4.13); K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=938
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query 21 SSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAAR 80
+++ L N Q + +LHG M Q ER V + D P VLVATDVAAR
Sbjct 510 NAEELANNLKQEGHNLGLLHGDMDQSERNKV--------ISDFKKKDIP-VLVATDVAAR 560
Query 81 GLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMET 140
GLD P ++ V+ YD D + + HRIGR GRAG G+A +L T ++ A +V +E
Sbjct 561 GLDIP-SIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEG 619
Query 141 CGQSVPRSLVEFAMQFPPFREARLSGLRVVWQGGKVGRELRQQQNTSFGGLGFDT--GCQ 198
Q V + L++ AMQ FR++R ++GGK G++L N GGLG+ G
Sbjct 620 ANQHVSKELLDLAMQNAWFRKSR-------FKGGK-GKKL----NIGGGGLGYRERPGLG 667
Query 199 VEPIDKSLASNAPSIAEAAAAAAAAAAAAAAAARA 233
E +D+ +N S EA + A A +A
Sbjct 668 SENMDRG-NNNVMSNYEAYKPSTGAMGDRLTAMKA 701
> xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase DDX42
[EC:3.6.4.13]
Length=947
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 22/173 (12%)
Query 21 SSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAAR 80
+++ L N Q + +LHG M Q ER V+ F S P VLVATDVAAR
Sbjct 507 NAEELAANLRQDDHPLGLLHGDMDQSERNKVIS----DFKKKSIP-----VLVATDVAAR 557
Query 81 GLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMET 140
GLD P ++ VV YD D + + HRIGR GRAG G+A +L T +E A +V +E
Sbjct 558 GLDIP-SIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKESNFAGDLVRNLEG 616
Query 141 CGQSVPRSLVEFAMQFPPFREARLSGLRVVWQGGKVGRELRQQQNTSFGGLGF 193
Q V + L++ AMQ FR++R ++ GK G++L N GGLG+
Sbjct 617 ANQYVSKELLDLAMQNSWFRKSR-------FKAGK-GKKL----NIGGGGLGY 657
> dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.1.-); K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=908
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query 23 QGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGL 82
+ L N Q + +LHG M Q ER V + D P VLVATDVAARGL
Sbjct 514 EELATNLIQEGYSLGLLHGDMDQSERNKV--------IADFKKKNLP-VLVATDVAARGL 564
Query 83 DFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCG 142
D P ++ VV YD D + + HRIGR GRAG G+A +L T ++ A +V +E
Sbjct 565 DIP-SIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGDLVRNLEGAN 623
Query 143 QSVPRSLVEFAMQFPPFREARL 164
QSV + L++ AMQ P FR++R
Sbjct 624 QSVSKDLLDLAMQNPWFRKSRF 645
> ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/
nucleic acid binding / protein binding
Length=712
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query 25 LQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDF 84
L RN +TF AI HG Q ER V+ + + RTP VLVATDVAARGLD
Sbjct 490 LARNLTRTFGAAAI-HGDKSQAERDDVLNQFRS--------GRTP-VLVATDVAARGLDV 539
Query 85 PPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQS 144
+ +VV YD PN E YVHRIGR GRAG +GLA + F Q+ + A+ +++ +E Q
Sbjct 540 K-DIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQK 598
Query 145 VPRSLVEFA 153
VP + E A
Sbjct 599 VPPQVREMA 607
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 18/131 (13%)
Query 29 TNQTFKYVAILHGGMQQGERLAVMRRMQ---HHFLGDSGPARTPLVLVATDVAARGLDFP 85
T +FK VA LHG Q R+ +++ + HH VL+ATDVAARGLD
Sbjct 494 TLNSFK-VAALHGDKDQASRMETLQKFKSGVHH------------VLIATDVAARGLDIK 540
Query 86 PALSLVVCYDAPNDPEVYVHRIGRAGRAG-RSGLACSLFTKQEKRQAAFVVEKMETCGQS 144
+L VV YD D +++VHRIGR GRAG R G+A +L T++E R A +V + GQ+
Sbjct 541 -SLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQN 599
Query 145 VPRSLVEFAMQ 155
VP L + AM+
Sbjct 600 VPPELTDLAMK 610
> ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=646
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG Q ER +R + RTP +LVATDVAARGLD P ++ VV +D PN
Sbjct 435 IHGDRSQQEREVALRSFKT--------GRTP-ILVATDVAARGLDIP-HVAHVVNFDLPN 484
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFA 153
D + YVHRIGR GRAG SGLA + F A + E M+ Q VP L +A
Sbjct 485 DIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYA 539
> ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=612
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG Q ER +R + RTP +LVATDVAARGLD P ++ VV +D PN
Sbjct 438 IHGDRTQQEREVALRSFK--------TGRTP-ILVATDVAARGLDIP-HVAHVVNFDLPN 487
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFA 153
D + YVHRIGR GRAG+SG+A + F + + A + E M+ Q VP L +A
Sbjct 488 DIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYA 542
> cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=811
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
+ +LHG M Q ER + + + + +LVATDVAARGLD + V+ +D
Sbjct 538 IVLLHGDMLQAERNENLLKFR----------KKSQILVATDVAARGLDIS-EIRTVINFD 586
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQ 155
D + +VHRIGR GRAG G A +L T+++ +V+ +E+ Q VP+ L++ AM+
Sbjct 587 MARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLAMK 646
Query 156 FPPFREAR 163
FR R
Sbjct 647 SSWFRGQR 654
> ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=633
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG Q ER ++ + SG RTP +LVATDVAARGLD P ++ VV +D PN
Sbjct 448 IHGDRTQQEREVALKAFK------SG--RTP-ILVATDVAARGLDIP-HVAHVVNFDLPN 497
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFA 153
D + YVHRIGR GRAG+SGLA + F A + E M+ Q VP L +A
Sbjct 498 DIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYA 552
> ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent
RNA helicase/ ATPase
Length=619
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query 25 LQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDF 84
L RN + F AI HG Q ER V+ + + SG RTP VLVATDVAARGLD
Sbjct 419 LTRNLTRQFGAAAI-HGDKSQPERDNVLNQFR------SG--RTP-VLVATDVAARGLDV 468
Query 85 PPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQS 144
+ VV YD PN E YVHRIGR GRAG +G A + F Q+ + A+ +++ +E Q
Sbjct 469 K-DIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQR 527
Query 145 VPRSLVEFA 153
VP + E A
Sbjct 528 VPPQIREMA 536
> ath:AT3G06480 DEAD box RNA helicase, putative
Length=1088
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 10/118 (8%)
Query 37 AILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDA 96
++HG QGER V+ + + SG + VL+ATDVAARGLD + +V+ YD
Sbjct 707 VVIHGDKTQGERDWVLNQFR------SGKS---CVLIATDVAARGLDIK-DIRVVINYDF 756
Query 97 PNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAM 154
P E YVHRIGR GRAG +G+A + FT+Q+ + A +++ +E Q VP + + AM
Sbjct 757 PTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAM 814
> sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=546
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 10/114 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG Q ER V++ ++ R+P ++VATDVAARG+D ++ V+ YD P
Sbjct 390 IHGDKDQRERDWVLQEFRN--------GRSP-IMVATDVAARGIDVK-GINYVINYDMPG 439
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
+ E YVHRIGR GRAG +G A S FT+Q K A ++ M Q++P L+++
Sbjct 440 NIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKY 493
> cel:F57B9.6 inf-1; INitiation Factor family member (inf-1);
K03257 translation initiation factor 4A
Length=402
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ LHG M Q ER +MR + SG +R VL+ TD+ ARG+D +SLV+ YD
Sbjct 295 VSCLHGDMDQAERDTIMREFR------SGSSR---VLITTDILARGIDVQ-QVSLVINYD 344
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
P++ E Y+HRIGR+GR GR G+A + T+ + RQ + T + +P S+ +
Sbjct 345 LPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADL 401
> mmu:100504817 eukaryotic initiation factor 4A-III-like; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=278
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 171 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVPQ-VSLIINYD 220
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
PN+ E+Y+HRIGR+GR GR G+A + + R + + T +P +L +
Sbjct 221 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADL 277
> sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA
helicase DBP3 [EC:3.6.4.13]
Length=523
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query 25 LQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDF 84
++RN VA +HG + Q +R + + SG + +L+ATDVAARGLD
Sbjct 375 VERNLKYNGYNVAAIHGDLSQQQRTQALNEFK------SGKSN---LLLATDVAARGLDI 425
Query 85 PPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQS 144
P + V+ P E YVHRIGR GRAG++G A +LFT+QEK A +V + Q
Sbjct 426 P-NVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQP 484
Query 145 VPRSLVEF 152
VP L++F
Sbjct 485 VPEDLIKF 492
> mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=646
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V LHG +Q +R + + +G R +L+ATD+A+RGLD ++ V YD
Sbjct 512 VESLHGNREQSDREKALENFK------TGKVR---ILIATDLASRGLDVH-DITHVYNYD 561
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQ 155
P + E YVHR+GR GRAGR+G++ +L T+ + R A ++ +E Q++P LV A +
Sbjct 562 FPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVATELINILERANQNIPEELVLMAER 621
Query 156 F 156
+
Sbjct 622 Y 622
> mmu:668137 Gm8994, B020013A22Rik, EG668137; predicted gene 8994;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 304 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVP-QVSLIINYD 353
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
PN+ E+Y+HRIGR+GR GR G+A + + R + + T +P +L +
Sbjct 354 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADL 410
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 11/92 (11%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M+Q +R VM+ + +G R VL++TDV ARGLD P +SLV+ YD
Sbjct 292 VSSMHGDMEQKDRDEVMKEFR------AGTTR---VLISTDVWARGLDVP-QVSLVINYD 341
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQE 127
PN+ E+Y+HRIGR+GR GR G+A + F KQ+
Sbjct 342 LPNNRELYIHRIGRSGRFGRKGVAIN-FVKQD 372
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 26/155 (16%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
LHGG Q +R + + ++ +L+AT VAARGLD L LVV +DAPN
Sbjct 468 LHGGKDQTDRESTISDFKNDVCN---------LLIATSVAARGLDV-KELELVVNFDAPN 517
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQFPP 158
E YVHR+GR GRAGR G A + ++ + + A +V+ +E Q VP L A
Sbjct 518 HYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA----- 572
Query 159 FREARLSGLRVVWQGGKVGRELRQQQNTSFGGLGF 193
G V KV + + Q T +GG GF
Sbjct 573 ------DGFMV-----KVKQGIEQAHGTGYGGSGF 596
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 11/92 (11%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M+Q +R VM+ + +G R VL++TDV ARGLD P +SLV+ YD
Sbjct 292 VSSMHGDMEQKDRDEVMKEFR------AGTTR---VLISTDVWARGLDVP-QVSLVINYD 341
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQE 127
PN+ E+Y+HRIGR+GR GR G+A + F KQ+
Sbjct 342 LPNNRELYIHRIGRSGRFGRKGVAIN-FVKQD 372
> cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=561
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG QGER V++ + +TP++L ATDVAARGLD + V+ YD PN
Sbjct 406 IHGDKNQGERDWVLQEFK--------AGKTPIML-ATDVAARGLDVDD-IKFVINYDYPN 455
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFA 153
+ E YVHRIGR GR+ + G A + FT +A +++ ++ Q+VP++L + A
Sbjct 456 NSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
> hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862,
NMP265, NUK34, eIF4AIII; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 304 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVP-QVSLIINYD 353
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 354 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 387
> mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF4A-III,
mKIAA0111; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 304 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVP-QVSLIINYD 353
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 354 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 387
> mmu:434050 Gm5576, EG434050; predicted pseudogene 5576; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TD+ ARGLD P +SL++ YD
Sbjct 304 VSSMHGNMPQKERESIMKEFR------SGASR---VLISTDIWARGLDVP-QVSLIINYD 353
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 354 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 387
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V LHG +Q +R + + +G R +L+ATD+A+RGLD ++ V +D
Sbjct 514 VESLHGDREQRDREKALENFK------TGKVR---ILIATDLASRGLDVH-DVTHVYNFD 563
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQ 155
P + E YVHRIGR GRAGR+G++ + T+ + R A+ ++ +E QS+P LV A +
Sbjct 564 FPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAER 623
Query 156 FPPFREAR 163
F ++ R
Sbjct 624 FKAHQQKR 631
> xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp265,
nuk34; eukaryotic translation initiation factor 4A3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=414
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 307 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVP-QVSLIINYD 356
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 357 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 390
> dre:100330671 eukaryotic translation initiation factor 4A-like;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD P +SL++ YD
Sbjct 299 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVP-QVSLIINYD 348
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 349 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 382
> cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=586
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
+HG +Q ER V+ + F + P +++ATDVAARGLD ++ V+ +D PN
Sbjct 447 IHGDKKQEERTWVL----NEFRTGASP-----IMIATDVAARGLDIK-DINFVINFDFPN 496
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQ 155
E Y+HRIGR GRAG +G++ S FT + R A+ +++ ++ Q VP L + + Q
Sbjct 497 QIEDYIHRIGRTGRAGATGVSLSFFTPDKYRMASDLIKVLKEAKQRVPPELFKLSPQ 553
> sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-box
family; component of 90S preribosome complex involved in
production of 18S rRNA and assembly of 40S small ribosomal
subunit; ATPase activity stimulated by association with Esp2p
(EC:3.6.1.-); K14778 ATP-dependent RNA helicase DDX49/DBP8
[EC:3.6.4.13]
Length=431
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query 18 RGESSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDV 77
R +++ L+R Q VA LH M Q ER + R + + AR +L+ATDV
Sbjct 263 RTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFR------ANAAR---ILIATDV 313
Query 78 AARGLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQE 127
A+RGLD P + LVV YD P+DP+V++HR GR RAGR G A S T+++
Sbjct 314 ASRGLDIP-TVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQRD 362
> tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1.3.69
3.4.21.72); K12811 ATP-dependent RNA helicase DDX46/PRP5
[EC:3.6.4.13]
Length=1544
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query 31 QTFKY---VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPA 87
+ KY A LHGG Q +R ++ Q RT +L+AT VAARGLD
Sbjct 1239 ELLKYGYQAATLHGGQDQTDREFTIQEFQDGV-------RT--LLIATSVAARGLDCKHC 1289
Query 88 LSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPR 147
+ LV+ PN E YVHRIGR GRAGR G+A + TK++ +A + + + GQ+VP+
Sbjct 1290 V-LVINMTCPNHIEDYVHRIGRTGRAGRIGVAYTFLTKEDADKADDLEKALTQSGQAVPQ 1348
Query 148 SLVEFAMQF 156
+L + + Q+
Sbjct 1349 ALSDLSAQY 1357
> tgo:TGME49_005540 RNA helicase, putative
Length=1069
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
LHG M+Q RLA ++ SG + P VL+ATDVAARGLDFP + + D P
Sbjct 654 LHGRMKQRARLAACKK-----FASSG--KEPKVLLATDVAARGLDFPD-VDWTLQLDPPQ 705
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFV 134
+PEV+VHRIGRA RAGRSG A L E F+
Sbjct 706 NPEVFVHRIGRAARAGRSGCALLLLLPHEDAYLPFL 741
> pfa:PF10_0309 DEAD/DEAH box helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=917
Score = 80.5 bits (197), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query 25 LQRNTNQTFKY-------VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDV 77
L+ + N F + V LHG M Q R +V + ++ +L+AT +
Sbjct 791 LRHSINNVFNFLKTKGYNVDYLHGKMSQIRRQSVFENFRK---------KSVQILIATSI 841
Query 78 AARGLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEK 137
AARGLDFP L LV+ YD P++ E Y+HRIGR GR G+ G+A + F K +++
Sbjct 842 AARGLDFPD-LELVINYDLPSEFEQYMHRIGRTGRIGKGGMAINYFNSSNKNIIDKLIDH 900
Query 138 METCGQSVPRSLVEF 152
+ Q VP L+ F
Sbjct 901 LRKYDQPVPNWLLHF 915
> sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=617
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query 31 QTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSL 90
Q FK AI HG Q ER + + A +LVAT VAARGLD P ++
Sbjct 434 QNFKATAI-HGDRTQAERERALSAFK---------ANVADILVATAVAARGLDIP-NVTH 482
Query 91 VVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLV 150
V+ YD P+D + YVHRIGR GRAG +G+A S F + ++E + Q VP L
Sbjct 483 VINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLS 542
Query 151 EFAMQ 155
+ + Q
Sbjct 543 DLSRQ 547
> ath:AT1G31970 STRS1; STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP
binding / ATP-dependent helicase/ helicase/ nucleic acid
binding; K14811 ATP-dependent RNA helicase DBP3 [EC:3.6.4.13]
Length=537
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query 9 SRAAAARLLRGESSQGLQRNTNQT-FKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPAR 67
+R L + E+ + L+R Q +K V+I HG Q ER R F S P
Sbjct 367 NRVLVFALYKVEAER-LERFLQQRGWKAVSI-HGNKAQSER----TRSLSLFKEGSCP-- 418
Query 68 TPLVLVATDVAARGLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQE 127
+LVATDVAARGLD P + +V+ Y P E YVHRIGR GRAG+ G+A + FT
Sbjct 419 ---LLVATDVAARGLDIP-DVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLN 474
Query 128 KRQAAFVVEKMETCGQSVPRSLVEFAMQFPPFREARLSG 166
K A +V + GQ VP L++F +E++L G
Sbjct 475 KGLAGELVNVLREAGQVVPADLLKFGTHVKK-KESKLYG 512
> tpv:TP02_0123 RNA helicase-1; K03257 translation initiation
factor 4A
Length=400
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER +MR + SG R VL+ TD+ ARG+D +SLV+ YD
Sbjct 293 VSSMHGDMGQKERDLIMREFR------SGSTR---VLITTDLLARGIDVQ-QVSLVINYD 342
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
P P+ Y+HRIGR+GR GR G+A + T Q+ + T + +P + E+
Sbjct 343 LPMSPDNYIHRIGRSGRFGRKGVAINFVTHQDMDTMKSIENYYNTQIEEMPADIAEY 399
> tgo:TGME49_063820 ATP-dependent RNA helicase, putative (EC:2.7.11.1)
Length=1053
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query 38 ILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAP 97
+L G Q ER V R + R P VLVAT VAARGLDFP + LV+ D P
Sbjct 945 VLTGNRTQPERQQVFRNFRD--------GRFP-VLVATSVAARGLDFP-NVGLVINVDMP 994
Query 98 NDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQF 156
+ E YVHRIGR GRAGR G+A S +K+ A ++ ++ +P L + A F
Sbjct 995 QEMEHYVHRIGRTGRAGRPGVAISYMNWNDKKLAPAMIHILKQHDSEIPAFLQDMANDF 1053
> dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; eukaryotic
translation initiation factor 4A, isoform 3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 10/94 (10%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER ++M+ + SG +R VL++TDV ARGLD +SL++ YD
Sbjct 299 VSSMHGDMPQKERESIMKEFR------SGASR---VLISTDVWARGLDVS-QVSLIINYD 348
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
PN+ E+Y+HRIGR+GR GR G+A + + R
Sbjct 349 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 382
> cel:Y71H2AM.19 hypothetical protein; K11594 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=643
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query 4 SGDAASRAAAARLLRGESSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDS 63
+GD++ RG S N Q ++ V I HG ++Q ER +H L +
Sbjct 424 TGDSSLTLVFVETKRGASDLAYYLN-RQNYEVVTI-HGDLKQFER------EKHLDLFRT 475
Query 64 GPARTPLVLVATDVAARGLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLF 123
G T +LVAT VAARGLD P + V+ YD P+D + YVHRIGR GR G GLA S F
Sbjct 476 G---TAPILVATAVAARGLDIP-NVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFF 531
Query 124 TKQEKRQAAFVVEKMETCGQSVPRSL 149
+ + A +++ + Q +P L
Sbjct 532 NDKNRNIARELMDLIVEANQELPDWL 557
> xla:398188 ddx21, MGC130693; DEAD (Asp-Glu-Ala-Asp) box polypeptide
21
Length=800
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
LHG +QQ ER V++ + T VL+AT+VAARGLD P + LVV Y AP
Sbjct 503 LHGDLQQKEREVVLKGFRQG---------TFEVLIATNVAARGLDIP-EVDLVVLYSAPK 552
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
+ + YVHR GR GRAGR+G+ SL+ EK
Sbjct 553 EADAYVHRSGRTGRAGRTGVCISLYEPWEKH 583
> sce:YHR065C RRP3; Protein involved in rRNA processing; required
for maturation of the 35S primary transcript of pre-rRNA
and for cleavage leading to mature 18S rRNA; homologous to
eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase
activity (EC:3.6.1.-); K14777 ATP-dependent RNA helicase
DDX47/RRP3 [EC:3.6.4.13]
Length=501
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
LHG + Q +R+ + D A +LVATDVAARGLD P ++ +VV YD P
Sbjct 351 LHGDLNQNQRMGSL---------DLFKAGKRSILVATDVAARGLDIP-SVDIVVNYDIPV 400
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVE 151
D + Y+HR+GR RAGRSG + SL ++ + ++ E G+ +P+ V+
Sbjct 401 DSKSYIHRVGRTARAGRSGKSISLVSQYD---LELILRIEEVLGKKLPKESVD 450
> eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-dependent
RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Length=629
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 17/127 (13%)
Query 20 ESSQGLQRNTNQTFKYVAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAA 79
E ++ L+RN + A L+G M Q R + R++ L +L+ATDVAA
Sbjct 260 EVAEALERNGYNS----AALNGDMNQALREQTLERLKDGRLD---------ILIATDVAA 306
Query 80 RGLDFPPALSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKME 139
RGLD +SLVV YD P D E YVHRIGR GRAGR+G A LF + +R+ +E+
Sbjct 307 RGLDVE-RISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAL-LFVENRERRLLRNIER-- 362
Query 140 TCGQSVP 146
T ++P
Sbjct 363 TMKLTIP 369
> tgo:TGME49_050770 eukaryotic translation initiation factor 4A
(EC:3.4.22.44)
Length=412
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q R +MR + SG R VL+ TD+ ARG+D +SLV+ YD
Sbjct 305 VSSMHGDMDQKSREMIMREFR------SGSTR---VLITTDLLARGIDVQ-QVSLVINYD 354
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
P E Y+HRIGR+GR GR G+A + T + Q + + T + +P + EF
Sbjct 355 LPATKENYIHRIGRSGRFGRKGVAINFVTSSDVEQLKEIEKHYNTQIEEMPMEVAEF 411
> xla:398189 RNA helicase II/Gu
Length=759
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query 39 LHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPN 98
LHG +QQ ER V++ + T VL+AT+VAARGLD P + LVV Y AP
Sbjct 461 LHGDLQQKEREVVLKGFRQG---------TFEVLIATNVAARGLDIP-EVDLVVLYSAPK 510
Query 99 DPEVYVHRIGRAGRAGRSGLACSLFTKQEKR 129
+ + YVHR GR GRAGR+G+ SL+ E+
Sbjct 511 EADAYVHRSGRTGRAGRTGVCISLYEPWERH 541
> bbo:BBOV_III010250 17.m07889; eukaryotic translation initiation
factor 4A; K03257 translation initiation factor 4A
Length=402
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER +MR + SG R VL+ TD+ ARG+D +SLV+ YD
Sbjct 295 VSSMHGDMSQNERDLIMREFR------SGSTR---VLITTDLLARGIDVQ-QVSLVINYD 344
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
P P+ Y+HRIGR+GR GR G+A + T + + T + +P + E+
Sbjct 345 LPMSPDNYIHRIGRSGRFGRKGVAINFLTPMDVECMKNIENYYNTQIEEMPAEIAEY 401
> tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=657
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 21/139 (15%)
Query 37 AILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDA 96
A +HGG+ Q ER +R + G VLV TDVA++GLDFP A+ V+ +D
Sbjct 487 AAVHGGLAQEERSEAVRAFRE---GRKD------VLVGTDVASKGLDFP-AIQHVINFDM 536
Query 97 PNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEFAMQF 156
P + E YVHRIGR GR GR+G+A + K ++ ET + L+E +
Sbjct 537 PKEIENYVHRIGRTGRCGRTGVATTFVNKNQE----------ETVLLDLKALLIEAGQRM 586
Query 157 PPFREARLS-GLRVVWQGG 174
PPF EA S GL + GG
Sbjct 587 PPFLEALDSRGLNLKEIGG 605
> ath:AT1G72730 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative; K03257 translation initiation factor
4A
Length=414
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query 40 HGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYDAPND 99
HG M Q R +MR + SG +R VL+ TD+ ARG+D +SLV+ +D P
Sbjct 311 HGDMDQNTRDIIMREFR------SGSSR---VLITTDLLARGIDVQ-QVSLVINFDLPTQ 360
Query 100 PEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPRSLVEF 152
PE Y+HRIGR+GR GR G+A + T +++R A + + +P ++ +
Sbjct 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADL 413
> ath:AT3G19760 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative / DEAD box RNA helicase, putative;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=408
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 11/92 (11%)
Query 36 VAILHGGMQQGERLAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPALSLVVCYD 95
V+ +HG M Q ER A+M + SG +R VL+ TDV ARG+D +SLV+ YD
Sbjct 301 VSSMHGDMPQKERDAIMNEFR------SGDSR---VLITTDVWARGIDVQ-QVSLVINYD 350
Query 96 APNDPEVYVHRIGRAGRAGRSGLACSLFTKQE 127
PN+ E+Y+HRIGR+GR GR G+A + F K +
Sbjct 351 LPNNRELYIHRIGRSGRFGRKGVAIN-FVKSD 381
> sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box
RNA helicase, required for translation initiation of all
yeast mRNAs; mutations in human DEAD-box DBY are a frequent
cause of male infertility (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=604
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query 31 QTFKYVAILHGGMQQGER---LAVMRRMQHHFLGDSGPARTPLVLVATDVAARGLDFPPA 87
Q F+ AI HG Q ER LA R SG A +LVAT VAARGLD P
Sbjct 422 QNFRATAI-HGDRTQSERERALAAFR---------SGAA---TLLVATAVAARGLDIP-N 467
Query 88 LSLVVCYDAPNDPEVYVHRIGRAGRAGRSGLACSLFTKQEKRQAAFVVEKMETCGQSVPR 147
++ V+ YD P+D + YVHRIGR GRAG +GLA + F + + E + Q VP
Sbjct 468 VTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPS 527
Query 148 SLVEFAMQFP 157
L + M P
Sbjct 528 FLKDAMMSAP 537
Lambda K H
0.315 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 11838497496
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40