bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1623_orf1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_080800 SNF2 family N-terminal domain-containing pro... 313 4e-85
bbo:BBOV_IV011770 23.m06400; snf2-related chromatin remodeling... 294 2e-79
tpv:TP01_1132 ATP-dependent helicase 276 4e-74
cpv:cgd8_3080 Swr1p like SWI/SNF2 family ATpase with a HSA dom... 275 8e-74
mmu:100043597 Srcap, B930091H02Rik, D030022P06Rik, F630004O05R... 269 5e-72
hsa:10847 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-r... 269 5e-72
cel:Y111B2A.22 ssl-1; yeast Swi2/Snf2-Like family member (ssl-... 264 1e-70
sce:YDR334W SWR1; Swi2/Snf2-related ATPase that is the structu... 260 3e-69
ath:AT3G12810 PIE1; PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWER... 254 2e-67
pfa:PF08_0048 ATP-dependent helicase, putative; K01509 adenosi... 246 3e-65
sce:YGL150C INO80; ATPase, subunit of a complex containing act... 209 4e-54
mmu:68142 Ino80, 2310079N15Rik, 4632409L19Rik, Inoc1; INO80 ho... 207 2e-53
dre:566768 si:ch211-244p18.3; K11665 DNA helicase INO80 [EC:3.... 207 2e-53
hsa:54617 INO80, INO80A, INOC1, hINO80; INO80 homolog (S. cere... 207 2e-53
dre:562355 si:ch211-227i14.2; K11320 E1A-binding protein p400 ... 204 1e-52
ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA... 203 4e-52
ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); AT... 187 3e-47
ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11); ... 187 3e-47
hsa:57634 EP400, CAGH32, DKFZP434I225, FLJ42018, FLJ45115, P40... 179 8e-45
hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2... 177 2e-44
mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matr... 177 3e-44
ath:AT3G06010 ATCHR12; ATP binding / DNA binding / helicase/ n... 176 6e-44
mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik... 176 7e-44
hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF... 174 2e-43
mmu:75560 Ep400, 1700020J09Rik, AU023439, mDomino, mKIAA1498, ... 174 2e-43
dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484, w... 172 6e-43
sce:YFR038W IRC5; Irc5p (EC:3.6.1.-) 172 1e-42
dre:557875 MGC113183, smarcad1, wu:fi25c01; zgc:113183; K14439... 171 2e-42
dre:559803 novel protein similar to SWI/SNF related, matrix as... 171 2e-42
xla:399165 smarca5, iswi; SWI/SNF related, matrix associated, ... 171 2e-42
xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lym... 170 4e-42
hsa:56916 SMARCAD1, DKFZp762K2015, ETL1, HEL1, KIAA1122; SWI/S... 169 7e-42
cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family me... 169 9e-42
xla:444176 smarca1, MGC80667, brg1, snf2l; SWI/SNF related, ma... 168 1e-41
mmu:13990 Smarcad1, AV081750, AW226546, D6Pas1, Etl1, mKIAA112... 167 3e-41
cel:F01G4.1 psa-4; Phasmid Socket Absent family member (psa-4)... 167 3e-41
pfa:PF10_0232 Chromodomain-helicase-DNA-binding protein 1 homo... 167 3e-41
cpv:cgd2_3700 SWI/SNF related transcriptional regulator ATpase... 166 5e-41
sce:YOR290C SNF2, GAM1, HAF1, SWI2, TYE3; Catalytic subunit of... 166 5e-41
sce:YOR304W ISW2; ATP-dependent DNA translocase involved in ch... 165 1e-40
mmu:12648 Chd1, 4930525N21Rik, AI851787, AW555109, MGC141554; ... 164 2e-40
hsa:1105 CHD1, DKFZp686E2337; chromodomain helicase DNA bindin... 164 2e-40
tgo:TGME49_073870 chromatin remodeling complex protein SNF2L, ... 164 2e-40
mmu:68058 Chd1l, 4432404A22Rik, Alc1, Snf2p; chromodomain heli... 164 2e-40
hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lympho... 163 4e-40
cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like... 162 5e-40
bbo:BBOV_IV009080 23.m05963; chromo-helicase DNA-binding prote... 162 7e-40
tpv:TP01_0866 hypothetical protein; K11367 chromodomain-helica... 162 7e-40
ath:AT5G19310 homeotic gene regulator, putative; K11647 SWI/SN... 162 7e-40
ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding... 162 8e-40
> tgo:TGME49_080800 SNF2 family N-terminal domain-containing protein
(EC:2.7.11.1 2.7.1.127)
Length=2894
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 167/195 (85%), Gaps = 0/195 (0%)
Query 15 PLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWG 74
P L+RA LR YQ+EGV WLF LH G N ILADEMGLGKT+QTI LLA++ALE G+WG
Sbjct 1212 PAPALVRATLRTYQSEGVQWLFALHDKGLNGILADEMGLGKTLQTIVLLARLALERGVWG 1271
Query 75 PHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATA 134
PHL+VVPTSV+ NWE EF KF PGF+VL+Y+GSA ER +KR GW+R +AF+VCI SY+T
Sbjct 1272 PHLIVVPTSVMLNWEREFFKFCPGFKVLVYFGSAQERAKKRTGWSRPYAFHVCIASYSTV 1331
Query 135 VKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSL 194
VKDA I +R++WYS+VLDEAQNIKNF S+RWQTLLTFN+QHRLLLTGTPLQN+L ELWSL
Sbjct 1332 VKDAQIFRRKKWYSLVLDEAQNIKNFHSRRWQTLLTFNTQHRLLLTGTPLQNNLAELWSL 1391
Query 195 MHFLMPTLFSSHENF 209
MHFLMPT+F SH++F
Sbjct 1392 MHFLMPTVFQSHDDF 1406
> bbo:BBOV_IV011770 23.m06400; snf2-related chromatin remodeling
factor SRCAP
Length=1675
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 161/202 (79%), Gaps = 2/202 (0%)
Query 8 QPDFKPLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMA 67
PD +P LIRA LR YQ +G+ WL L+R +N ILADEMGLGKT+QTIALLA +A
Sbjct 659 DPDEVQVPC--LIRAVLRPYQLDGLRWLASLYRNKSNGILADEMGLGKTLQTIALLAHLA 716
Query 68 LEMGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVC 127
+ G WGPHL+VVPTSVL NWEMEFKKF PGF +L YYG+ AER +KR GW + +AFNVC
Sbjct 717 CDHGNWGPHLIVVPTSVLLNWEMEFKKFCPGFTILSYYGTPAERAKKRVGWNKEYAFNVC 776
Query 128 IVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNH 187
IVSYAT V+DA ILKR+ W MVLDEAQNIKNF SKRWQTLLTFN+Q RLLLTGTPLQN
Sbjct 777 IVSYATVVQDAHILKRKSWVYMVLDEAQNIKNFHSKRWQTLLTFNTQGRLLLTGTPLQNS 836
Query 188 LLELWSLMHFLMPTLFSSHENF 209
L ELWSLMHF++P +F+SH F
Sbjct 837 LQELWSLMHFILPDIFTSHSEF 858
> tpv:TP01_1132 ATP-dependent helicase
Length=1632
Score = 276 bits (706), Expect = 4e-74, Method: Composition-based stats.
Identities = 123/191 (64%), Positives = 150/191 (78%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
LI+ LR YQ EG+ WL L+ N ILADEMGLGKT+QTI LLA +A G WGPH++
Sbjct 693 LIKGVLRPYQKEGLRWLVSLYERNINGILADEMGLGKTLQTICLLAYLACNKGNWGPHII 752
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VVPTS+L NW MEF KF PGF++L YYG+ AER +KR GW + H+FNV I SY+ V+D+
Sbjct 753 VVPTSILLNWVMEFNKFCPGFKILAYYGTPAERSKKRTGWNKPHSFNVLITSYSIVVQDS 812
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
+LKRR W M+LDEAQNIKNF+SKRWQTLLTFN+++RLLLTGTPLQN L ELWSLMHF+
Sbjct 813 YVLKRRAWEYMILDEAQNIKNFTSKRWQTLLTFNTKYRLLLTGTPLQNSLQELWSLMHFI 872
Query 199 MPTLFSSHENF 209
+P +F+SH F
Sbjct 873 LPNIFTSHTQF 883
> cpv:cgd8_3080 Swr1p like SWI/SNF2 family ATpase with a HSA domain
at the N-terminus probably involved in chromatin remodelling
Length=1371
Score = 275 bits (703), Expect = 8e-74, Method: Composition-based stats.
Identities = 117/191 (61%), Positives = 156/191 (81%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L++ +REYQ G++W+ +L++ G N ILADEMGLGKTIQTI+LLA +A M WGPHL+
Sbjct 333 LLKNNMREYQVAGLEWMVKLYKKGLNGILADEMGLGKTIQTISLLAYLACYMKNWGPHLI 392
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VVPTSV+ NWEMEFK++LP F+V+ Y+G+ ERQ+KR GW +AFNVCI SY ++DA
Sbjct 393 VVPTSVMLNWEMEFKRWLPCFKVITYFGTPKERQKKRIGWNDPNAFNVCIASYTLILQDA 452
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
I KR++W ++LDEAQNIKNF S++WQ +L+FN++ RLLLTGTPLQN+L+ELWSL+HFL
Sbjct 453 HIFKRKQWQYLILDEAQNIKNFKSQKWQVMLSFNTERRLLLTGTPLQNNLMELWSLLHFL 512
Query 199 MPTLFSSHENF 209
MP +F+SH +F
Sbjct 513 MPHIFTSHHDF 523
> mmu:100043597 Srcap, B930091H02Rik, D030022P06Rik, F630004O05Rik;
Snf2-related CREBBP activator protein; K11661 helicase
SRCAP [EC:3.6.4.-]
Length=3237
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 153/197 (77%), Gaps = 2/197 (1%)
Query 13 PLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGI 72
P+PL L+R +LREYQ G+DWL ++ N ILADEMGLGKTIQTI+LLA +A E G
Sbjct 621 PIPL--LLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGN 678
Query 73 WGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYA 132
WGPHL++VPTSV+ NWEME K++ P F++L YYG+ ER+ KRQGWT+ +AF+VCI SY
Sbjct 679 WGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYK 738
Query 133 TAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELW 192
++D +R+ W ++LDEAQNIKNF S+RWQ+LL FNSQ RLLLTGTPLQN L+ELW
Sbjct 739 LVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELW 798
Query 193 SLMHFLMPTLFSSHENF 209
SLMHFLMP +F SH F
Sbjct 799 SLMHFLMPHVFQSHREF 815
> hsa:10847 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-related
CREBBP activator protein; K11661 helicase SRCAP [EC:3.6.4.-]
Length=3230
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 153/197 (77%), Gaps = 2/197 (1%)
Query 13 PLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGI 72
P+PL L+R +LREYQ G+DWL ++ N ILADEMGLGKTIQTI+LLA +A E G
Sbjct 609 PIPL--LLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGN 666
Query 73 WGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYA 132
WGPHL++VPTSV+ NWEME K++ P F++L YYG+ ER+ KRQGWT+ +AF+VCI SY
Sbjct 667 WGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYK 726
Query 133 TAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELW 192
++D +R+ W ++LDEAQNIKNF S+RWQ+LL FNSQ RLLLTGTPLQN L+ELW
Sbjct 727 LVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELW 786
Query 193 SLMHFLMPTLFSSHENF 209
SLMHFLMP +F SH F
Sbjct 787 SLMHFLMPHVFQSHREF 803
> cel:Y111B2A.22 ssl-1; yeast Swi2/Snf2-Like family member (ssl-1);
K11320 E1A-binding protein p400 [EC:3.6.4.-]
Length=2395
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 149/195 (76%), Gaps = 0/195 (0%)
Query 15 PLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWG 74
P+ LIR +LREYQ G+DW+ L+ N ILADEMGLGKTIQTI+LLA MA IWG
Sbjct 549 PVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWG 608
Query 75 PHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATA 134
PHL+VVPTSV+ NWEMEFKK+ P ++L Y+G+A ER KR+GW + + F+VCI SY T
Sbjct 609 PHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNCFHVCITSYKTV 668
Query 135 VKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSL 194
+D K+R W ++LDEAQNIKN+ S+RWQ LL ++ RLLLTGTPLQN L+ELWSL
Sbjct 669 TQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSL 728
Query 195 MHFLMPTLFSSHENF 209
MHFLMPT+FSSH++F
Sbjct 729 MHFLMPTIFSSHDDF 743
> sce:YDR334W SWR1; Swi2/Snf2-related ATPase that is the structural
component of the SWR1 complex, which exchanges histone
variant H2AZ (Htz1p) for chromatin-bound histone H2A (EC:3.6.1.-);
K11681 helicase SWR1 [EC:3.6.4.12]
Length=1514
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 147/198 (74%), Gaps = 0/198 (0%)
Query 3 QLQPHQPDFKPLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIAL 62
++Q Q +P+ L+R LR YQ +G++WL L+ N ILADEMGLGKTIQTI+L
Sbjct 675 KVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISL 734
Query 63 LAKMALEMGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRH 122
LA +A E WGPHL+VVPTSVL NWEMEFK+F PGF+VL YYGS +R+ KR+GW +
Sbjct 735 LAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPD 794
Query 123 AFNVCIVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGT 182
AF+VCIVSY V+D KR+ W MVLDEA NIKNF S RWQ LL FN+Q RLLLTGT
Sbjct 795 AFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGT 854
Query 183 PLQNHLLELWSLMHFLMP 200
PLQN+L ELWSL++FLMP
Sbjct 855 PLQNNLAELWSLLYFLMP 872
> ath:AT3G12810 PIE1; PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING
1); ATP binding / DNA binding / helicase/ nucleic acid
binding; K11320 E1A-binding protein p400 [EC:3.6.4.-]
Length=2055
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 149/191 (78%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L++ LREYQ G+DWL ++ N ILADEMGLGKTI TIALLA +A + GIWGPHL+
Sbjct 531 LLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLI 590
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VVPTSV+ NWE EF K+ P F++L Y+GSA ER+ KRQGW + ++F+VCI +Y ++D+
Sbjct 591 VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDS 650
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
+ KR++W ++LDEA IKN+ S+RWQTLL FNS+ R+LLTGTPLQN L+ELWSLMHFL
Sbjct 651 KMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 710
Query 199 MPTLFSSHENF 209
MP +F SH+ F
Sbjct 711 MPHVFQSHQEF 721
> pfa:PF08_0048 ATP-dependent helicase, putative; K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=2082
Score = 246 bits (629), Expect = 3e-65, Method: Composition-based stats.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
+I+A LR+YQ G+ WL L++ N ILADEMGLGKT+Q I+LL+ +A IWGPHLV
Sbjct 657 IIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLV 716
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
+VPTS+L NWE+E K+F P F++L YYG+ ER +KR GW + +F++CI SY+T VKD
Sbjct 717 IVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKDH 776
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
+ KR+ W ++LDEA NIKNF++KRW +L+ + LL+TGTPLQN L ELWSL+HFL
Sbjct 777 LVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFL 836
Query 199 MPTLFSSHENF 209
MP +F+SH +F
Sbjct 837 MPNIFTSHLDF 847
> sce:YGL150C INO80; ATPase, subunit of a complex containing actin
and several actin-related proteins that has chromatin remodeling
activity and 3' to 5' DNA helicase activity in vitro;
has a role in modulating stress gene transcription (EC:3.6.1.-);
K11665 DNA helicase INO80 [EC:3.6.4.12]
Length=1489
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 139/199 (69%), Gaps = 7/199 (3%)
Query 18 RLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHL 77
+++ L+EYQ +G++WL L+ G N ILADEMGLGKT+Q+I++LA +A IWGP L
Sbjct 700 KILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFL 759
Query 78 VVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRH-------AFNVCIVS 130
VV P S L NW E KFLP F++L Y+G+A +R+ R+ W R++ F+V + S
Sbjct 760 VVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTS 819
Query 131 YATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLE 190
Y V DA L++ +W M+LDEAQ IK+ S RW+ LL+F+ ++RLLLTGTP+QN + E
Sbjct 820 YQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQE 879
Query 191 LWSLMHFLMPTLFSSHENF 209
LW+L+HF+MP+LF SH+ F
Sbjct 880 LWALLHFIMPSLFDSHDEF 898
> mmu:68142 Ino80, 2310079N15Rik, 4632409L19Rik, Inoc1; INO80
homolog (S. cerevisiae) (EC:3.6.4.12); K11665 DNA helicase INO80
[EC:3.6.4.12]
Length=1559
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query 14 LPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIW 73
+P + +L+ YQ +G++WL L+ G N ILADEMGLGKT+Q+IALLA +A IW
Sbjct 510 IPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 569
Query 74 GPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGW------TRRHAFNVC 127
GP L++ P S L NW EF +F+P F+VL Y+G+ +R+ R+ W T+ F+V
Sbjct 570 GPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVV 629
Query 128 IVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNH 187
I SY V+D +R +W MVLDEAQ +K+ SS RW+ LL F ++RLLLTGTP+QN
Sbjct 630 ITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNT 689
Query 188 LLELWSLMHFLMPTLFSSHENF 209
+ ELW+L+HF+MPTLF SHE F
Sbjct 690 MAELWALLHFIMPTLFDSHEEF 711
> dre:566768 si:ch211-244p18.3; K11665 DNA helicase INO80 [EC:3.6.4.12]
Length=1552
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query 14 LPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIW 73
+P + +L+ YQ +G++WL L+ G N ILADEMGLGKT+Q+IALLA +A IW
Sbjct 498 IPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 557
Query 74 GPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGW------TRRHAFNVC 127
GP L++ P S L NW EF +F+P F+VL Y+G+ +R+ R+ W T+ F+V
Sbjct 558 GPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVV 617
Query 128 IVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNH 187
I SY V+D +R +W MVLDEAQ +K+ +S RW+ LL F ++RLLLTGTP+QN
Sbjct 618 ITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNT 677
Query 188 LLELWSLMHFLMPTLFSSHENF 209
+ ELW+L+HF+MPTLF SHE F
Sbjct 678 MAELWALLHFIMPTLFDSHEEF 699
> hsa:54617 INO80, INO80A, INOC1, hINO80; INO80 homolog (S. cerevisiae)
(EC:3.6.4.12); K11665 DNA helicase INO80 [EC:3.6.4.12]
Length=1556
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query 14 LPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIW 73
+P + +L+ YQ +G++WL L+ G N ILADEMGLGKT+Q+IALLA +A IW
Sbjct 508 IPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 567
Query 74 GPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGW------TRRHAFNVC 127
GP L++ P S L NW EF +F+P F+VL Y+G+ +R+ R+ W T+ F+V
Sbjct 568 GPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVV 627
Query 128 IVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNH 187
I SY V+D +R +W MVLDEAQ +K+ SS RW+ LL F ++RLLLTGTP+QN
Sbjct 628 ITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNT 687
Query 188 LLELWSLMHFLMPTLFSSHENF 209
+ ELW+L+HF+MPTLF SHE F
Sbjct 688 MAELWALLHFIMPTLFDSHEEF 709
> dre:562355 si:ch211-227i14.2; K11320 E1A-binding protein p400
[EC:3.6.4.-]
Length=1764
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 127/191 (66%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L+ LREYQ GV+WL LHR N ILADE GLGKT+QT+A A +A GIWGPHLV
Sbjct 1076 LLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHLACNQGIWGPHLV 1135
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VV T L NWEMEFK++ PG ++LLY GS +R+ KR W + F+VC+ SY +KD
Sbjct 1136 VVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEPNNFHVCVTSYKLLLKDQ 1195
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
+ RR W +VLDE Q IKN + K W+T+ SQ R+LL TPLQN L ELW+++HFL
Sbjct 1196 SHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLINTPLQNTLKELWTMIHFL 1255
Query 199 MPTLFSSHENF 209
+P + + NF
Sbjct 1256 LPGITHPYLNF 1266
> ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA
binding / helicase/ nucleic acid binding; K11665 DNA helicase
INO80 [EC:3.6.4.12]
Length=1507
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 10/219 (4%)
Query 1 SQQLQPHQPDFKPLPLS----RLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKT 56
S + H P P+ + L + L+EYQ +G+ WL + G N ILADEMGLGKT
Sbjct 559 SSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKT 618
Query 57 IQTIALLAKMALEMGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQ 116
IQ +A LA +A E IWGP LVV P SVL NW E +F P + L Y+G ER R+
Sbjct 619 IQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRK 678
Query 117 G------WTRRHAFNVCIVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLT 170
+ R F++ I SY V D +R +W MVLDEAQ IK+ SS RW+TLL+
Sbjct 679 NINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLS 738
Query 171 FNSQHRLLLTGTPLQNHLLELWSLMHFLMPTLFSSHENF 209
FN ++RLLLTGTP+QN++ ELW+L+HF+MP LF +H+ F
Sbjct 739 FNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQF 777
> ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1069
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 129/190 (67%), Gaps = 0/190 (0%)
Query 20 IRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVV 79
I+ +LR+YQ G++WL RL+ G N ILADEMGLGKT+QTI+LLA + GI GPH+VV
Sbjct 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 249
Query 80 VPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAA 139
P S L NW E ++F P R + + G+ ER+ R+ F++C+ S+ A+K+
Sbjct 250 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKT 309
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLM 199
L+R W +++DEA IKN +S +T+ F++ +RLL+TGTPLQN+L ELW+L++FL+
Sbjct 310 TLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLL 369
Query 200 PTLFSSHENF 209
P +FSS E F
Sbjct 370 PEVFSSAETF 379
> ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding;
K11654 SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1055
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 0/190 (0%)
Query 20 IRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVV 79
I+ ++R+YQ G++WL RL+ G N ILADEMGLGKT+QTI+LLA + GI GPH+VV
Sbjct 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query 80 VPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAA 139
P S L NW E ++F P R + + G+ ER+ R+ F++C+ S+ A+K+
Sbjct 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKT 304
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLM 199
L+R W +++DEA IKN +S +T+ F++ +RLL+TGTPLQN+L ELW+L++FL+
Sbjct 305 ALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLL 364
Query 200 PTLFSSHENF 209
P +FSS E F
Sbjct 365 PEIFSSAETF 374
> hsa:57634 EP400, CAGH32, DKFZP434I225, FLJ42018, FLJ45115, P400,
TNRC12; E1A binding protein p400; K11320 E1A-binding protein
p400 [EC:3.6.4.-]
Length=3122
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 115/184 (62%), Gaps = 0/184 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L+ LR+YQ G+DWL +L+R N ILADE GLGKT+Q IA A +A G WGPHLV
Sbjct 1049 LLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1108
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VV + + WE+E K++ PG ++L Y GS E + KRQ W ++F+VCI SY +
Sbjct 1109 VVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGL 1168
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
R W +V+DE Q +K + + W+ + T SQ RLLL +PL N LELW+++HFL
Sbjct 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
Query 199 MPTL 202
+P +
Sbjct 1229 VPGI 1232
> hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2L,
SNF2L1, SNF2LB, SNF2LT, SWI, SWI2; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1054
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 122/186 (65%), Gaps = 0/186 (0%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++WL L+ G N ILADEMGLGKT+QTIALL + I GPH+V+VP S
Sbjct 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAILKR 143
L NW EFK+++P RV+ + G R + ++VC+ SY +K+ ++ K+
Sbjct 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKK 302
Query 144 REWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPTLF 203
W +V+DEA IKN SK + + F S +RLLLTGTPLQN+L ELW+L++FL+P +F
Sbjct 303 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 362
Query 204 SSHENF 209
+S ++F
Sbjct 363 NSADDF 368
> mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1046
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 122/186 (65%), Gaps = 0/186 (0%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++WL L+ G N ILADEMGLGKT+QTIALL + I GPH+V+VP S
Sbjct 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 246
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAILKR 143
L NW EFK+++P RV+ + G R + ++VC+ SY +K+ ++ K+
Sbjct 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKK 306
Query 144 REWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPTLF 203
W +V+DEA IKN SK + + F S +RLLLTGTPLQN+L ELW+L++FL+P +F
Sbjct 307 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 366
Query 204 SSHENF 209
+S ++F
Sbjct 367 NSADDF 372
> ath:AT3G06010 ATCHR12; ATP binding / DNA binding / helicase/
nucleic acid binding; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
2/4 [EC:3.6.4.-]
Length=1132
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
LR YQ EG+ W+ L N ILADEMGLGKTIQTI+L+A + G+ GP+L+V P
Sbjct 431 GELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAP 490
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
+VL NW EF ++P LY G ER+ R+ FNV I Y ++D A L
Sbjct 491 KAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIMRDKAFL 550
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLT-FNSQHRLLLTGTPLQNHLLELWSLMHFLMP 200
K+ EWY M++DE +KN S +TLLT + + RLLLTGTP+QN L ELWSL++FL+P
Sbjct 551 KKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLP 610
Query 201 TLFSSHENF 209
+F+S +NF
Sbjct 611 HIFNSVQNF 619
> mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik,
MommeD4, Snf2h; SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1051
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 122/188 (64%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LR+YQ G++WL L+ G N ILADEMGLGKT+QTI+LL M I GPH+V+VP
Sbjct 177 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 236
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L NW EFKK++P R + G +R + ++VC+ SY +K+ ++
Sbjct 237 KSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 296
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
K+ W +V+DEA IKN SK + + F + +RLLLTGTPLQN+L ELWSL++FL+P
Sbjct 297 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPD 356
Query 202 LFSSHENF 209
+F+S ++F
Sbjct 357 VFNSADDF 364
> hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF
related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5; K11654 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 5 [EC:3.6.4.-]
Length=1052
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LR+YQ G++WL L+ G N ILADEMGLGKT+QTI+LL M I GPH+V+VP
Sbjct 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 237
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L NW EFK+++P R + G +R + ++VC+ SY +K+ ++
Sbjct 238 KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF 297
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
K+ W +V+DEA IKN SK + + F + +RLLLTGTPLQN+L ELWSL++FL+P
Sbjct 298 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPD 357
Query 202 LFSSHENF 209
+F+S ++F
Sbjct 358 VFNSADDF 365
> mmu:75560 Ep400, 1700020J09Rik, AU023439, mDomino, mKIAA1498,
p400; E1A binding protein p400; K11320 E1A-binding protein
p400 [EC:3.6.4.-]
Length=3035
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 115/191 (60%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L+ LR+YQ G+DWL +L+R N ILADE GLGKT+Q IA A +A G WGPHLV
Sbjct 1048 LLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1107
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
V+ + + WE+E K++ PG + L Y GS E + KRQ WT + F++CI SY +
Sbjct 1108 VMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEWTEPNNFHICITSYKQFFRGY 1167
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
R W +V+DE Q +K + + W+ + SQ RLLL PL N LELW+++HFL
Sbjct 1168 TAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLIDVPLHNTFLELWTMVHFL 1227
Query 199 MPTLFSSHENF 209
+P + + +F
Sbjct 1228 IPGISRPYLSF 1238
> dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484,
wu:fb26d12, wu:fb49g04, zgc:158434; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1028
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LR+YQ G++WL L+ G N ILADEMGLGKT+QTI+LL M I GPH+V+VP
Sbjct 154 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 213
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L NW EFK+++P + + G ER + ++VC+ SY + + A+
Sbjct 214 KSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVF 273
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
K+ W +V+DEA IKN SK + + F + +RLLLTGTPLQN+L ELW+L++FL+P
Sbjct 274 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPD 333
Query 202 LFSSHENF 209
+F+S E+F
Sbjct 334 VFNSSEDF 341
> sce:YFR038W IRC5; Irc5p (EC:3.6.1.-)
Length=853
Score = 172 bits (435), Expect = 1e-42, Method: Composition-based stats.
Identities = 91/209 (43%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query 5 QPHQPDFKPLPLSRLIR-ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALL 63
Q PD + RL++ L+ YQ EG++WL L+ G N ILADEMGLGKT+Q+IALL
Sbjct 202 QNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALL 261
Query 64 AKMALEMGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAA--ERQRKRQGWTRR 121
A EM GP LV P S L+NW EF KF P VL YYG+ ER K + + ++
Sbjct 262 A-FIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQ 320
Query 122 HA-FNVCIVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLT 180
H + I SY ++D ++ + W +++DE +KN + + + L N+ +RLLLT
Sbjct 321 HGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLT 380
Query 181 GTPLQNHLLELWSLMHFLMPTLFSSHENF 209
GTPLQN+L ELWSL++F+MP +F+ E F
Sbjct 381 GTPLQNNLAELWSLLNFIMPDIFADFEIF 409
> dre:557875 MGC113183, smarcad1, wu:fi25c01; zgc:113183; K14439
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A containing DEAD/H box 1 [EC:3.6.4.12]
Length=972
Score = 171 bits (432), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/187 (47%), Positives = 124/187 (66%), Gaps = 5/187 (2%)
Query 23 RLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPT 82
+L+ YQ G+ WL LH+ + ILADEMGLGKTIQ IA LA + E GI GPHL+ VP+
Sbjct 447 KLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHL-YEKGIKGPHLITVPS 505
Query 83 SVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQG-WTRRHAFNVCIVSYATAV---KDA 138
S L+NW E + P +VL+YYGS +R+ RQ T FN+ + +Y + D
Sbjct 506 STLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTYNLTIGNDHDR 565
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
++ ++ + V DE +KN +S R++ L+T N++HRLLLTGTPLQN+LLEL SL++F+
Sbjct 566 SLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNFI 625
Query 199 MPTLFSS 205
MP++FSS
Sbjct 626 MPSMFSS 632
> dre:559803 novel protein similar to SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5 (smarca5); K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
1 [EC:3.6.4.-]
Length=1036
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 120/186 (64%), Gaps = 0/186 (0%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++W+ L+ G N ILADEMGLGKT+QTIALL + I GPH+V+VP S
Sbjct 143 LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 202
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAILKR 143
L NW EFK+++P + + G+ ER + ++VC+ SY +++ ++ K+
Sbjct 203 TLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKK 262
Query 144 REWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPTLF 203
W +V+DEA IKN SK + F + +RLLLTGTPLQN+L ELWSL++FL+P +F
Sbjct 263 FNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 322
Query 204 SSHENF 209
+S +F
Sbjct 323 NSASDF 328
> xla:399165 smarca5, iswi; SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member
5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1046
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 120/188 (63%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LR+YQ G++WL L+ G N ILADEMGLGKT+QTI+LL M I GPH+V+VP
Sbjct 171 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVP 230
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L NW EFK+++P + G R + ++VC+ SY +++ ++
Sbjct 231 KSTLHNWMAEFKRWVPSLCAVCLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIREKSVF 290
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
K+ W +V+DEA IKN SK + + F + +RLLLTGTPLQN+L ELW+L++FL+P
Sbjct 291 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPD 350
Query 202 LFSSHENF 209
+F+S E+F
Sbjct 351 VFNSSEDF 358
> xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lymphoid-specific
Length=838
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
+R YQ EG++WL L G N ILADEMGLGKT+Q IA ++ M +E G+ GP V P S
Sbjct 221 MRWYQIEGMEWLRMLWENGINGILADEMGLGKTVQCIATIS-MMVERGVPGPFFVCGPLS 279
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHA----FNVCIVSYATAVKDAA 139
L NW EFK+F P VLLY+G+A +R+R + +R F V I S+ A++D
Sbjct 280 TLPNWVSEFKRFSPEIPVLLYHGNAQDRRRLARKINKREGSLQLFPVVITSFEIAMRDRP 339
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLM 199
+L+ W M+LDE IKN + + Q L F S ++LLLTGTPLQN+L ELWSL++FL+
Sbjct 340 VLQHNAWKYMILDEGHRIKNMNCRLIQELKLFRSDNKLLLTGTPLQNNLSELWSLLNFLL 399
Query 200 PTLFSSHENF 209
P +F +F
Sbjct 400 PDVFDDLRSF 409
> hsa:56916 SMARCAD1, DKFZp762K2015, ETL1, HEL1, KIAA1122; SWI/SNF-related,
matrix-associated actin-dependent regulator of
chromatin, subfamily a, containing DEAD/H box 1 (EC:3.6.4.12);
K14439 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box 1
[EC:3.6.4.12]
Length=1028
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
L+ YQ G++WL +H+ G N ILADEMGLGKTIQ IA LA + E G GPHL+VVP S
Sbjct 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQE-GNNGPHLIVVPAS 555
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKR-QGWTRRHAFNVCIVSYATAV---KDAA 139
++NW E + P +VL YYGS ER++ R +R +NV + +Y A+ D +
Sbjct 556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRS 615
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLM 199
+ +R + + DE +KN S R+Q L+T N+ +RLLLTGTP+QN+LLEL SL++F+M
Sbjct 616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675
Query 200 PTLFSS 205
P +FSS
Sbjct 676 PHMFSS 681
> cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family
member (isw-1)
Length=1009
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 117/188 (62%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+R+YQ G++WL L N ILADEMGLGKT+QTI+++ M PHLV+VP
Sbjct 130 GEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVP 189
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L+NW EFKK+ P ++ G A R + + F+VC +Y +K L
Sbjct 190 KSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQL 249
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
K+ W +++DEA IKN SK +T+ NS++RLL+TGTPLQN+L ELW+L++FL+P
Sbjct 250 KKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPD 309
Query 202 LFSSHENF 209
+F+S ++F
Sbjct 310 IFTSSDDF 317
> xla:444176 smarca1, MGC80667, brg1, snf2l; SWI/SNF related,
matrix associated, actin dependent regulator of chromatin, subfamily
a, member 1
Length=403
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 119/186 (63%), Gaps = 0/186 (0%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++W+ L+ G N ILADEMGLGKT+QTIALL + I GPH+V+VP S
Sbjct 160 LRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 219
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAILKR 143
L NW EFK+++P + G R + ++VC+ SY +K+ ++ K+
Sbjct 220 TLHNWMNEFKRWIPSLCAVCLIGDKNVRAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKK 279
Query 144 REWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPTLF 203
W +V+DEA IKN SK + + F + +RLLLTGTPLQN+L ELW+L++FL+P +F
Sbjct 280 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF 339
Query 204 SSHENF 209
+S ++F
Sbjct 340 NSADDF 345
> mmu:13990 Smarcad1, AV081750, AW226546, D6Pas1, Etl1, mKIAA1122;
SWI/SNF-related, matrix-associated actin-dependent regulator
of chromatin, subfamily a, containing DEAD/H box 1 (EC:3.6.4.12);
K14439 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H
box 1 [EC:3.6.4.12]
Length=1021
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
L+ YQ G++WL +H+ G N ILADEMGLGKTIQ IA LA + E G GPHL+VVP S
Sbjct 492 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQE-GNKGPHLIVVPAS 550
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHA-FNVCIVSYATAV---KDAA 139
++NW E + P VL YYGS ER++ R ++ +NV + +Y A+ D +
Sbjct 551 TIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRS 610
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLM 199
+ +R + + DE +KN S R+Q L+T N+++RLLLTGTP+QN+LLEL SL++F+M
Sbjct 611 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVM 670
Query 200 PTLFSS 205
P +FSS
Sbjct 671 PHMFSS 676
> cel:F01G4.1 psa-4; Phasmid Socket Absent family member (psa-4);
K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1474
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 124/189 (65%), Gaps = 6/189 (3%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
L+ YQ +G++W+ L+ N ILADEMGLGKTIQTI+L+ + GP+LV+VP S
Sbjct 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAILKR 143
L NW+ EF K+ P ++Y G+ R R+ +G R+ AFNV + +Y +K+ A+L +
Sbjct 593 TLSNWQNEFAKWAPSVTTIIYKGTKDAR-RRVEGQIRKGAFNVLMTTYEYVIKEKALLGK 651
Query 144 REWYSMVLDEAQNIKNFSSKRWQTLLT---FNSQHRLLLTGTPLQNHLLELWSLMHFLMP 200
W M++DE +KN + K TL+ F++QHRLLLTGTPLQN L ELW+L++FL+P
Sbjct 652 IRWKYMIIDEGHRLKNHNCKL--TLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLP 709
Query 201 TLFSSHENF 209
++FSS F
Sbjct 710 SIFSSCGTF 718
> pfa:PF10_0232 Chromodomain-helicase-DNA-binding protein 1 homolog,
putative; K11367 chromodomain-helicase-DNA-binding protein
1 [EC:3.6.4.12]
Length=3328
Score = 167 bits (422), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 123/198 (62%), Gaps = 11/198 (5%)
Query 23 RLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPT 82
+LR YQ G++W+ + + +LADEMGLGKT+QTIA++ M + + GP+LV+VP
Sbjct 1295 KLRAYQLTGLNWIVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQ 1354
Query 83 SVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTR---------RHAFNVCIV--SY 131
S ++NW EFK +LP V+ Y+G+A R+ R + R+ F+VCI S
Sbjct 1355 STVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVPNKGYRYKFDVCITTPSI 1414
Query 132 ATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLEL 191
+V D +LK+ W MV+DEA +KN SKR+ L F ++ +LLL+GTPL N+L EL
Sbjct 1415 LNSVSDVELLKKMPWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEEL 1474
Query 192 WSLMHFLMPTLFSSHENF 209
W+L+HFL P ++ +E F
Sbjct 1475 WTLLHFLNPQQYTYYETF 1492
> cpv:cgd2_3700 SWI/SNF related transcriptional regulator ATpase
; K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1552
Score = 166 bits (420), Expect = 5e-41, Method: Composition-based stats.
Identities = 86/195 (44%), Positives = 121/195 (62%), Gaps = 1/195 (0%)
Query 15 PLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWG 74
P+ L L YQ GV+W+ L+ + ILADEMGLGKT+QTIALL + G
Sbjct 569 PMKLLKGGSLLPYQIIGVEWMLSLYNNKLHGILADEMGLGKTVQTIALLTYLYEHKDNQG 628
Query 75 PHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATA 134
PHLVVVP S L NW+ EF+ + P ++L + GS ER R R+ FNVC+ ++
Sbjct 629 PHLVVVPLSTLPNWQKEFEIWSPELKILCFKGSRYER-RSLIYEMRQTKFNVCLTTFDFI 687
Query 135 VKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSL 194
++++ L+ +W +++DE +KN SK L F S++RLLLTGTPLQN + ELWSL
Sbjct 688 IRESGALQSMQWKHIIVDEGHRLKNSKSKFHVVLADFKSENRLLLTGTPLQNSITELWSL 747
Query 195 MHFLMPTLFSSHENF 209
++FL+P +F S E+F
Sbjct 748 LNFLLPQVFHSVEDF 762
> sce:YOR290C SNF2, GAM1, HAF1, SWI2, TYE3; Catalytic subunit
of the SWI/SNF chromatin remodeling complex involved in transcriptional
regulation; contains DNA-stimulated ATPase activity;
functions interdependently in transcriptional activation
with Snf5p and Snf6p (EC:3.6.1.-); K11786 ATP-dependent helicase
STH1/SNF2 [EC:3.6.4.-]
Length=1703
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query 10 DFKPLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALE 69
D K P S L+ L++YQ +G+ W+ L N ILADEMGLGKTIQTI+LL +
Sbjct 754 DIKKQP-SILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEM 812
Query 70 MGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIV 129
I GP+LV+VP S L NW EF K+ P R + + GS ER+ K Q R F+V +
Sbjct 813 KNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAK-QAKIRAGEFDVVLT 871
Query 130 SYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLT-FNSQHRLLLTGTPLQNHL 188
++ +K+ A+L + +W M++DE +KN SK TL T +++ +RL+LTGTPLQN+L
Sbjct 872 TFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNL 931
Query 189 LELWSLMHFLMPTLFSSHENF 209
ELW+L++F++P +F+S ++F
Sbjct 932 PELWALLNFVLPKIFNSVKSF 952
> sce:YOR304W ISW2; ATP-dependent DNA translocase involved in
chromatin remodeling; ATPase component that, with Itc1p, forms
a complex required for repression of A-specific genes, INO1,
and early meiotic genes during mitotic growth (EC:3.6.1.-)
Length=1120
Score = 165 bits (417), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/188 (44%), Positives = 115/188 (61%), Gaps = 0/188 (0%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LR+YQ +G++WL LH + ILADEMGLGKT+QTI+ L + I GP L++VP
Sbjct 182 GKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVP 241
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
S L+NW EF K+ P VL+ +G R + F+V I SY +++ L
Sbjct 242 KSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNAL 301
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFLMPT 201
KR W +V+DEA IKN S Q + F S++RLL+TGTPLQN+L ELW+L++FL+P
Sbjct 302 KRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPD 361
Query 202 LFSSHENF 209
+F E F
Sbjct 362 IFGDSELF 369
> mmu:12648 Chd1, 4930525N21Rik, AI851787, AW555109, MGC141554;
chromodomain helicase DNA binding protein 1 (EC:3.6.4.12);
K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1711
Score = 164 bits (416), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 5/191 (2%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++WL G +CILADEMGLGKTIQTI+ L + E ++GP L+VVP S
Sbjct 479 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 538
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKR-QGW----TRRHAFNVCIVSYATAVKDA 138
L +W+ E + + ++Y G R R W T+R FN+ + +Y +KD
Sbjct 539 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 598
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
A L W + +DEA +KN S ++TL+ F S HRLL+TGTPLQN L ELWSL+HF+
Sbjct 599 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658
Query 199 MPTLFSSHENF 209
MP FSS E+F
Sbjct 659 MPEKFSSWEDF 669
> hsa:1105 CHD1, DKFZp686E2337; chromodomain helicase DNA binding
protein 1 (EC:3.6.4.12); K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1710
Score = 164 bits (416), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 5/191 (2%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
LR+YQ G++WL G +CILADEMGLGKTIQTI+ L + E ++GP L+VVP S
Sbjct 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQRKR-QGWT----RRHAFNVCIVSYATAVKDA 138
L +W+ E + + ++Y G R R WT +R FN+ + +Y +KD
Sbjct 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
A L W + +DEA +KN S ++TL+ F S HRLL+TGTPLQN L ELWSL+HF+
Sbjct 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660
Query 199 MPTLFSSHENF 209
MP FSS E+F
Sbjct 661 MPEKFSSWEDF 671
> tgo:TGME49_073870 chromatin remodeling complex protein SNF2L,
putative (EC:2.7.11.1)
Length=1556
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query 20 IRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVV 79
I +++ YQ EG++WL++LH N ILADEMGLGKT+QTI++LA + E I GPHLV+
Sbjct 195 IEGKMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVI 254
Query 80 VPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAA 139
P S L+NW E KK+ P FR +G+ ERQ + F++CI +Y +KD
Sbjct 255 CPRSTLDNWFNEVKKWCPRFRPARLHGTKEERQELYESVLDPGLFDICITTYEMVIKDYH 314
Query 140 ILKRR-EWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
L R +W +++DEA IKN S + + F + RLL+TGTPLQN+L ELW+L++F+
Sbjct 315 RLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFRPRRRLLITGTPLQNNLRELWALLNFI 374
Query 199 MPTLFSSHENF 209
MP LF +F
Sbjct 375 MPQLFDVTLDF 385
> mmu:68058 Chd1l, 4432404A22Rik, Alc1, Snf2p; chromodomain helicase
DNA binding protein 1-like (EC:3.6.4.12)
Length=900
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Query 7 HQPDFKPLPLSRLIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKM 66
+PD + L+ + RLR YQ EGV+WL + CIL DEMGLGKT QTIALL +
Sbjct 26 QEPDLQQWGLTGI---RLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYL 82
Query 67 ALEMGIWGPHLVVVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNV 126
+ GP LV+ P SVL NW+ E ++F PG + Y G ER R +Q + F+V
Sbjct 83 VGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHV 142
Query 127 CIVSYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQN 186
+ +Y +KDA+ LK W + +DEA +KN SS +TL F++ RLLLTGTP+QN
Sbjct 143 LLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQN 202
Query 187 HLLELWSLMHFLMPTLF 203
L EL+SL+ + P LF
Sbjct 203 SLRELYSLLCVVEPDLF 219
> hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lymphoid-specific
Length=838
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 121/192 (63%), Gaps = 9/192 (4%)
Query 24 LREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPTS 83
+R YQ EG++WL L G N ILADEMGLGKT+Q IA +A M ++ G+ GP LV P S
Sbjct 223 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALM-IQRGVPGPFLVCGPLS 281
Query 84 VLENWEMEFKKFLPGFRVLLYYGSAAERQR------KRQGWTRRHAFNVCIVSYATAVKD 137
L NW EFK+F P +LY+G+ ERQ+ KR+G + H V I S+ A++D
Sbjct 282 TLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHP--VVITSFEIAMRD 339
Query 138 AAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHF 197
L+ W +++DE IKN + + L FN+ ++LLLTGTPLQN+L ELWSL++F
Sbjct 340 RNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 399
Query 198 LMPTLFSSHENF 209
L+P +F ++F
Sbjct 400 LLPDVFDDLKSF 411
> cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like
helicase and a bromo domain ; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1673
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 125/191 (65%), Gaps = 3/191 (1%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
+LREYQ +G++WL L+ N ILAD MGLGKT+QT+++LA + G GPHL++ P
Sbjct 743 GQLREYQMKGLEWLVSLYNNNLNGILADAMGLGKTVQTVSVLAHIYENKGNRGPHLIIAP 802
Query 82 TSVLE-NWEMEFKKFLPGFRVLLYYGSAAERQRKRQGW-TRRHAFNVCIVSYATAVKDAA 139
S L NWE EF ++LP F ++Y G+ R++ R + T F+V + + A +KD
Sbjct 803 LSTLHGNWENEFNRWLPDFVKVIYEGNKEIRKQIRSKYMTGEAKFHVLLTTDAFIMKDKH 862
Query 140 ILKRREWYSMVLDEAQNIKNFSSKRWQTLLT-FNSQHRLLLTGTPLQNHLLELWSLMHFL 198
L++ +W +++DEA +KN SK Q L F ++HRL LTGTPLQN L E+W+L+++L
Sbjct 863 YLRKFDWEYIIVDEAHRLKNPKSKLVQILNNGFRAKHRLALTGTPLQNDLQEVWALLNYL 922
Query 199 MPTLFSSHENF 209
MP++F+S E F
Sbjct 923 MPSIFNSSETF 933
> bbo:BBOV_IV009080 23.m05963; chromo-helicase DNA-binding protein;
K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1729
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 11/198 (5%)
Query 23 RLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPT 82
+LR+YQ GV+W+ + G + +LADEMGLGKT+QTI L+ + G+ GP+LV+VP
Sbjct 722 KLRDYQLIGVNWIVNRMKRGLSVLLADEMGLGKTVQTITLIGHFLYKEGLIGPYLVIVPQ 781
Query 83 SVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQ---------GWTRRHAFNVCIV--SY 131
S ++NW EF+ +LP V+ YYG+A R+ R G R+ +VC+ S
Sbjct 782 STIDNWMREFETWLPQANVVCYYGNAKAREIIRTFELARVHVPGKGERYRCDVCVTTPSI 841
Query 132 ATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLEL 191
A D L+R W MV+DEA +KN +SKR+ L F + ++LLL+GTPL N+L EL
Sbjct 842 INAAVDLEFLRRISWQLMVVDEAHQLKNRNSKRFVELRQFMADYKLLLSGTPLHNNLEEL 901
Query 192 WSLMHFLMPTLFSSHENF 209
W+L+HF+ P ++ +E F
Sbjct 902 WTLLHFINPQIYPYYEEF 919
> tpv:TP01_0866 hypothetical protein; K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1816
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query 23 RLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVPT 82
+LR+YQ G++W+ + G + +LADEMGLGKT+QTI+L+ + + GP+L++VP
Sbjct 798 KLRDYQLTGLNWMVNRMKRGLSVLLADEMGLGKTVQTISLVGHFMYKEFLIGPYLIIVPQ 857
Query 83 SVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQ---------GWTRRHAFNVCIV--SY 131
S ++NW EF+ +LP + YYG+A R+ RQ G R+ +VCI S
Sbjct 858 STIDNWMREFEAWLPQANAVCYYGNATAREMIRQRELTRIFVPGKGERYKCDVCITTPSI 917
Query 132 ATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLEL 191
+ D L+R W MV+DEA +KN +SKR+ L+ F + ++LLL+GTPL N+L EL
Sbjct 918 INSPADLEFLRRISWQLMVVDEAHQLKNKNSKRFVELMQFMADYKLLLSGTPLHNNLEEL 977
Query 192 WSLMHFLMPTLFSSHENF 209
W+L+HF+ P ++ +E+F
Sbjct 978 WTLLHFINPQIYPYYEDF 995
> ath:AT5G19310 homeotic gene regulator, putative; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1064
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query 22 ARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLVVVP 81
LR YQ EG+ W+ L+ N ILADEMGLGKTIQTIAL+A + + GPHL++ P
Sbjct 384 GELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAP 443
Query 82 TSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDAAIL 141
+VL NWE EF + P LY GS +R R FNV I Y ++D A L
Sbjct 444 KAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR-ARIAGGKFNVLITHYDLIMRDKAFL 502
Query 142 KRREWYSMVLDEAQNIKNFSSKRWQTLLT-FNSQHRLLLTGTPLQNHLLELWSLMHFLMP 200
K+ +W M++DE +KN +TL T + + RLLLTGTP+QN L ELWSL++FL+P
Sbjct 503 KKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLP 562
Query 201 TLFSSHENF 209
+F+S NF
Sbjct 563 HIFNSIHNF 571
> ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding
/ DNA binding / chromatin binding / helicase/ nucleic acid
binding; K11367 chromodomain-helicase-DNA-binding protein
1 [EC:3.6.4.12]
Length=1724
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 125/200 (62%), Gaps = 11/200 (5%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
LI LR+YQ EG+++L N ILADEMGLGKT+Q++++L + I GP LV
Sbjct 620 LIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLV 679
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQ---------RKRQGWTRRHAFNVCIV 129
VVP S L NW EF+K+LPG +++Y G+ A R+ K+ G R FN +
Sbjct 680 VVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVG--RPIKFNALLT 737
Query 130 SYATAVKDAAILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLL 189
+Y +KD A+L + +W +++DEA +KN ++ + LL F+++++LL+TGTPLQN +
Sbjct 738 TYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVE 797
Query 190 ELWSLMHFLMPTLFSSHENF 209
ELW+L+HFL P F + + F
Sbjct 798 ELWALLHFLDPGKFKNKDEF 817
Lambda K H
0.325 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6494887820
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40