bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1717_orf1
Length=145
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_120300 SNF2 family N-terminal domain-containing pro... 234 5e-62
cpv:cgd2_3700 SWI/SNF related transcriptional regulator ATpase... 216 3e-56
pfa:PFB0730w DEAD/DEAH box helicase, putative; K11647 SWI/SNF-... 195 4e-50
sce:YOR290C SNF2, GAM1, HAF1, SWI2, TYE3; Catalytic subunit of... 178 4e-45
cel:F01G4.1 psa-4; Phasmid Socket Absent family member (psa-4)... 176 2e-44
sce:YIL126W STH1, NPS1; ATPase component of the RSC chromatin ... 170 1e-42
mmu:20586 Smarca4, Brg1, HP1-BP72, SNF2beta, SW1/SNF; SWI/SNF ... 165 4e-41
hsa:6597 SMARCA4, BAF190, BRG1, FLJ39786, RTPS2, SNF2, SNF2-BE... 165 4e-41
mmu:67155 Smarca2, 2610209L14Rik, SNF2alpha, Snf2l2, brahma, b... 165 6e-41
hsa:6595 SMARCA2, BAF190, BRM, FLJ36757, MGC74511, SNF2, SNF2L... 164 6e-41
hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2... 164 1e-40
mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matr... 163 1e-40
dre:559803 novel protein similar to SWI/SNF related, matrix as... 161 7e-40
dre:334032 smarca2, psa-4, wu:fa56c07, wu:fi27f11, zgc:66238; ... 160 9e-40
dre:100331069 SWI/SNF-related matrix-associated actin-dependen... 160 1e-39
dre:353295 smarca4, brg1, smarca2, wu:fb51a08; SWI/SNF related... 160 1e-39
dre:100329898 SWI/SNF-related matrix-associated actin-dependen... 160 1e-39
xla:100335135 smarca4, baf190, brg1, rtps2, snf2, snf2-beta, s... 160 1e-39
dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484, w... 159 2e-39
cel:C52B9.8 hypothetical protein; K11647 SWI/SNF-related matri... 156 2e-38
xla:444176 smarca1, MGC80667, brg1, snf2l; SWI/SNF related, ma... 155 3e-38
hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF... 155 4e-38
mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik... 154 9e-38
cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family me... 152 2e-37
xla:399165 smarca5, iswi; SWI/SNF related, matrix associated, ... 152 3e-37
ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11); ... 152 3e-37
ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); AT... 151 7e-37
ath:AT2G46020 BRM; transcription regulatory protein SNF2, puta... 148 5e-36
ath:AT2G28290 SYD; SYD (SPLAYED); ATPase/ chromatin binding 146 2e-35
ath:AT5G19310 homeotic gene regulator, putative; K11647 SWI/SN... 146 2e-35
hsa:10847 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-r... 145 3e-35
mmu:100043597 Srcap, B930091H02Rik, D030022P06Rik, F630004O05R... 145 4e-35
ath:AT3G06010 ATCHR12; ATP binding / DNA binding / helicase/ n... 142 4e-34
sce:YDR334W SWR1; Swi2/Snf2-related ATPase that is the structu... 141 9e-34
cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like... 140 2e-33
sce:YBR245C ISW1, SGN2; Isw1p (EC:3.6.1.-) 139 3e-33
sce:YOR304W ISW2; ATP-dependent DNA translocase involved in ch... 138 6e-33
mmu:68058 Chd1l, 4432404A22Rik, Alc1, Snf2p; chromodomain heli... 137 1e-32
sce:YER164W CHD1; Chd1p (EC:3.6.1.-); K11367 chromodomain-heli... 134 1e-31
bbo:BBOV_IV008380 23.m05834; SNF2 helicase (EC:3.6.1.-) 132 3e-31
ath:AT3G12810 PIE1; PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWER... 132 4e-31
hsa:9557 CHD1L, ALC1, CHDL, FLJ22530; chromodomain helicase DN... 131 7e-31
ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding... 130 1e-30
hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lympho... 130 1e-30
cpv:cgd8_3080 Swr1p like SWI/SNF2 family ATpase with a HSA dom... 130 2e-30
tpv:TP03_0128 global transcription activator 129 2e-30
dre:393283 chd1l, MGC56084, zgc:56084; chromodomain helicase D... 128 5e-30
mmu:15201 Hells, AI323785, E130115I21Rik, LSH, Lysh, PASG, YFK... 128 6e-30
xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lym... 127 9e-30
tpv:TP01_1132 ATP-dependent helicase 126 2e-29
> tgo:TGME49_120300 SNF2 family N-terminal domain-containing protein
(EC:2.7.11.1 3.2.1.3); K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1606
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/145 (82%), Positives = 131/145 (90%), Gaps = 0/145 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
LSLYNN+LHGILADEMGLGKTIQTIALLAYLKEFKNN GPHLII PLSTL NWADEF RW
Sbjct 702 LSLYNNDLHGILADEMGLGKTIQTIALLAYLKEFKNNSGPHLIIAPLSTLPNWADEFRRW 761
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
PSLKV++ KG RLERR+LQR+L++ DFNVCLTTFDLA+RER L+ P+WRHLVVDEGHR
Sbjct 762 CPSLKVVVLKGGRLERRELQRELRRGDFNVCLTTFDLAMRERHGLSFPNWRHLVVDEGHR 821
Query 121 MKNSKSKFHLSVSSFSASHRLLLTG 145
MKNSKSKFH+ VS F A+HRLLLTG
Sbjct 822 MKNSKSKFHICVSEFRATHRLLLTG 846
> cpv:cgd2_3700 SWI/SNF related transcriptional regulator ATpase
; K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1552
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 117/145 (80%), Gaps = 0/145 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
LSLYNN LHGILADEMGLGKT+QTIALL YL E K+N GPHL++VPLSTL NW EFE W
Sbjct 590 LSLYNNKLHGILADEMGLGKTVQTIALLTYLYEHKDNQGPHLVVVPLSTLPNWQKEFEIW 649
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
+P LK++ FKG+R ERR L +++Q FNVCLTTFD IRE AL + W+H++VDEGHR
Sbjct 650 SPELKILCFKGSRYERRSLIYEMRQTKFNVCLTTFDFIIRESGALQSMQWKHIIVDEGHR 709
Query 121 MKNSKSKFHLSVSSFSASHRLLLTG 145
+KNSKSKFH+ ++ F + +RLLLTG
Sbjct 710 LKNSKSKFHVVLADFKSENRLLLTG 734
> pfa:PFB0730w DEAD/DEAH box helicase, putative; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1997
Score = 195 bits (496), Expect = 4e-50, Method: Composition-based stats.
Identities = 92/146 (63%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNN-GGPHLIIVPLSTLSNWADEFER 59
+SLYNNNLHGILADEMGLGKTIQTI+L AYLKEFKNN +LIIVPLSTL NW EF R
Sbjct 896 VSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNINVKNLIIVPLSTLPNWISEFNR 955
Query 60 WAPSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
W PSL V+ ++G +LER+ + ++L + F++C+TTFDL I+E+S L SW ++VVDEGH
Sbjct 956 WCPSLNVITYRGNKLERKHIAKKLLEQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGH 1015
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
RMKN+KS+FH+ +S F + +R+LLTG
Sbjct 1016 RMKNNKSRFHVFLSEFKSKYRILLTG 1041
> sce:YOR290C SNF2, GAM1, HAF1, SWI2, TYE3; Catalytic subunit
of the SWI/SNF chromatin remodeling complex involved in transcriptional
regulation; contains DNA-stimulated ATPase activity;
functions interdependently in transcriptional activation
with Snf5p and Snf6p (EC:3.6.1.-); K11786 ATP-dependent helicase
STH1/SNF2 [EC:3.6.4.-]
Length=1703
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 117/146 (80%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SL+NN+L+GILADEMGLGKTIQTI+LL YL E KN GP+L+IVPLSTLSNW+ EF +W
Sbjct 779 VSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKW 838
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
AP+L+ + FKG+ ER+ Q +++ +F+V LTTF+ I+ER+ L+ W H+++DEGHR
Sbjct 839 APTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHR 898
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN++SK L++++ + A +RL+LTG
Sbjct 899 MKNAQSKLSLTLNTHYHADYRLILTG 924
> cel:F01G4.1 psa-4; Phasmid Socket Absent family member (psa-4);
K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1474
Score = 176 bits (446), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/146 (54%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTI+L+ YL E K N GP+L+IVPLSTLSNW +EF +W
Sbjct 545 VSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKW 604
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ +++KG + RR+++ Q+++ FNV +TT++ I+E++ L W+++++DEGHR
Sbjct 605 APSVTTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHR 664
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
+KN K L ++ F A HRLLLTG
Sbjct 665 LKNHNCKLTLMLNGFFHAQHRLLLTG 690
> sce:YIL126W STH1, NPS1; ATPase component of the RSC chromatin
remodeling complex; required for expression of early meiotic
genes; essential helicase-related protein homologous to Snf2p
(EC:3.6.1.-); K11786 ATP-dependent helicase STH1/SNF2 [EC:3.6.4.-]
Length=1359
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNN+L+GILADEMGLGKTIQ+I+L+ YL E K + GP L+IVPLST++NW EFE+W
Sbjct 482 VSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKW 541
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APSL +++KG +R LQ Q++ +F+V LTT++ I+++S L+ W H+++DEGHR
Sbjct 542 APSLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHR 601
Query 121 MKNSKSKFHLSVSSFSAS-HRLLLTG 145
MKN++SK ++S + + +RL+LTG
Sbjct 602 MKNAQSKLSFTISHYYRTRNRLILTG 627
> mmu:20586 Smarca4, Brg1, HP1-BP72, SNF2beta, SW1/SNF; SWI/SNF
related, matrix associated, actin dependent regulator of chromatin,
subfamily a, member 4; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1617
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL E K GP LIIVPLSTLSNWA EF++W
Sbjct 766 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKW 825
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG+ RR QL+ FNV LTT++ I+++ LA W++++VDEGHR
Sbjct 826 APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR 885
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A RLLLTG
Sbjct 886 MKNHHCKLTQVLNTHYVAPRRLLLTG 911
> hsa:6597 SMARCA4, BAF190, BRG1, FLJ39786, RTPS2, SNF2, SNF2-BETA,
SNF2L4, SNF2LB, SWI2, hSNF2b; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 4; K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1647
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL E K GP LIIVPLSTLSNWA EF++W
Sbjct 766 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKW 825
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG+ RR QL+ FNV LTT++ I+++ LA W++++VDEGHR
Sbjct 826 APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR 885
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A RLLLTG
Sbjct 886 MKNHHCKLTQVLNTHYVAPRRLLLTG 911
> mmu:67155 Smarca2, 2610209L14Rik, SNF2alpha, Snf2l2, brahma,
brm; SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily a, member 2; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1583
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL E K GP+LIIVPLSTLSNW EF++W
Sbjct 747 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKW 806
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG RR L QL+ FNV LTT++ I+++ LA W++++VDEGHR
Sbjct 807 APSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR 866
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A R+LLTG
Sbjct 867 MKNHHCKLTQVLNTHYVAPRRILLTG 892
> hsa:6595 SMARCA2, BAF190, BRM, FLJ36757, MGC74511, SNF2, SNF2L2,
SNF2LA, SWI2, Sth1p, hBRM, hSNF2a; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 2; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 2/4
[EC:3.6.4.-]
Length=1590
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL E K GP+LIIVPLSTLSNW EF++W
Sbjct 736 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKW 795
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG RR L QL+ FNV LTT++ I+++ LA W++++VDEGHR
Sbjct 796 APSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR 855
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A R+LLTG
Sbjct 856 MKNHHCKLTQVLNTHYVAPRRILLTG 881
> hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2L,
SNF2L1, SNF2LB, SNF2LT, SWI, SWI2; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1054
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTIALL YLK ++N GPH+++VP STL NW +EF+RW
Sbjct 195 ISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRW 254
Query 61 APSLKVMLFKGARLERRQLQR-QLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PSL+V+ F G + R R ++ +++VC+T++++ I+E+S WR+LV+DE H
Sbjct 255 VPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 314
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F +++RLLLTG
Sbjct 315 RIKNEKSKLSEIVREFKSTNRLLLTG 340
> mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1046
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTIALL YLK ++N GPH+++VP STL NW +EF+RW
Sbjct 199 ISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRW 258
Query 61 APSLKVMLFKGARLERRQLQR-QLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PSL+V+ F G + R R ++ +++VC+T++++ I+E+S WR+LV+DE H
Sbjct 259 VPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 318
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F +++RLLLTG
Sbjct 319 RIKNEKSKLSEIVREFKSTNRLLLTG 344
> dre:559803 novel protein similar to SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5 (smarca5); K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
1 [EC:3.6.4.-]
Length=1036
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTIALL YLK ++N GPH+++VP STL NW +EF+RW
Sbjct 155 ISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRW 214
Query 61 APSLKVMLFKGARLERRQLQRQLKQI-DFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P+LK + G + ER R + +++VC+T++++ IRE+S +WR+LV+DE H
Sbjct 215 VPTLKAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAH 274
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK F ++RLLLTG
Sbjct 275 RIKNEKSKLSEIAREFKTTNRLLLTG 300
> dre:334032 smarca2, psa-4, wu:fa56c07, wu:fi27f11, zgc:66238;
SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily a, member 2; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1568
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTI L+ YL E K GP+LIIVPLSTLSNW E ++W
Sbjct 738 VSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKW 797
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG RR L QL+ FNV +TT++ I+++ LA W++++VDEGHR
Sbjct 798 APSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHR 857
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A RLLLTG
Sbjct 858 MKNHHCKLTQVLNTHYVAPRRLLLTG 883
> dre:100331069 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4-like
Length=1234
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL EFK GP LIIVPLSTLSNW EF++W
Sbjct 385 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKW 444
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG+ RR L+ FNV +TT++ I+++ LA W++++VDEGHR
Sbjct 445 APSVVKVSYKGSPAARRAFLPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHR 504
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A R+LLTG
Sbjct 505 MKNHHCKLTQVLNTHYLAPRRVLLTG 530
> dre:353295 smarca4, brg1, smarca2, wu:fb51a08; SWI/SNF related,
matrix associated, actin dependent regulator of chromatin,
subfamily a, member 4; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
2/4 [EC:3.6.4.-]
Length=1627
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL EFK GP LIIVPLSTLSNW EF++W
Sbjct 778 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKW 837
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG+ RR L+ FNV +TT++ I+++ LA W++++VDEGHR
Sbjct 838 APSVVKVSYKGSPAARRAFLPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHR 897
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A R+LLTG
Sbjct 898 MKNHHCKLTQVLNTHYLAPRRVLLTG 923
> dre:100329898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4-like; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1627
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL EFK GP LIIVPLSTLSNW EF++W
Sbjct 778 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKW 837
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ + +KG+ RR L+ FNV +TT++ I+++ LA W++++VDEGHR
Sbjct 838 APSVVKVSYKGSPAARRAFLPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHR 897
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A R+LLTG
Sbjct 898 MKNHHCKLTQVLNTHYLAPRRVLLTG 923
> xla:100335135 smarca4, baf190, brg1, rtps2, snf2, snf2-beta,
snf2b, snf2l4, snf2lb, swi2; SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member
4; K11647 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-]
Length=1600
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNNNL+GILADEMGLGKTIQTIAL+ YL E K GP LIIVPLSTLSNW EF++W
Sbjct 751 VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKW 810
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
PS+ + +KG+ RR L+ FNV LTT++ I+++ LA W++++VDEGHR
Sbjct 811 GPSVVKVSYKGSPAARRAFVPMLRSGKFNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHR 870
Query 121 MKNSKSKFHLSVSS-FSASHRLLLTG 145
MKN K +++ + A RLLLTG
Sbjct 871 MKNHHCKLTQVLNTHYVAPRRLLLTG 896
> dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484,
wu:fb26d12, wu:fb49g04, zgc:158434; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1028
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTI+LL Y+K ++N GPH+++VP STL NW +EF+RW
Sbjct 168 ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRW 227
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PSLK + G R ER R L +++VC+T++++ I ER+ +WR+LV+DE H
Sbjct 228 VPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAH 287
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F ++RLLLTG
Sbjct 288 RIKNEKSKLSEIVREFKTTNRLLLTG 313
> cel:C52B9.8 hypothetical protein; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1336
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SL+NNNL+GILADEMGLGKTIQTIA + YL E K GP L+IVPLST+ NW +EF++W
Sbjct 378 VSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKW 437
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
A ++ ++ +KG + R+ + +K FNV LTTF+ IRE++ L W+++++DEGHR
Sbjct 438 AANVHLIAYKGPKETRKVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHR 497
Query 121 MKNSKSKF-HLSVSSFSASHRLLLTG 145
+KN K + + F RLL+TG
Sbjct 498 LKNQHCKLTEMLNTRFQCQRRLLITG 523
> xla:444176 smarca1, MGC80667, brg1, snf2l; SWI/SNF related,
matrix associated, actin dependent regulator of chromatin, subfamily
a, member 1
Length=403
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTIALL YLK ++N GPH+++VP STL NW +EF+RW
Sbjct 172 ISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRW 231
Query 61 APSLKVMLFKGARLERRQLQRQLKQI-DFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PSL + G + R R + +++VC+T++++ I+E+S +WR+LV+DE H
Sbjct 232 IPSLCAVCLIGDKNVRAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAH 291
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F ++RLLLTG
Sbjct 292 RIKNEKSKLSEIVREFKTTNRLLLTG 317
> hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF
related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5; K11654 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 5 [EC:3.6.4.-]
Length=1052
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTI+LL Y+K ++N GPH+++VP STL NW EF+RW
Sbjct 192 ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW 251
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P+L+ + G + +R R L +++VC+T++++ I+E+S +WR+LV+DE H
Sbjct 252 VPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAH 311
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F ++RLLLTG
Sbjct 312 RIKNEKSKLSEIVREFKTTNRLLLTG 337
> mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik,
MommeD4, Snf2h; SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1051
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTI+LL Y+K ++N GPH+++VP STL NW EF++W
Sbjct 191 ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKW 250
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P+L+ + G + +R R L +++VC+T++++ I+E+S +WR+LV+DE H
Sbjct 251 VPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAH 310
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F ++RLLLTG
Sbjct 311 RIKNEKSKLSEIVREFKTTNRLLLTG 336
> cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family
member (isw-1)
Length=1009
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 104/146 (71%), Gaps = 3/146 (2%)
Query 2 SLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWA 61
SL +N ++GILADEMGLGKT+QTI+++ Y+K +KN PHL+IVP STL NWA+EF++W
Sbjct 145 SLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWC 204
Query 62 PSLKVMLFKGARLERRQLQRQ--LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PS+ ++ G R Q+ R L Q F+VC TT+++ ++ ++ L +WR++++DE H
Sbjct 205 PSINAVVLIGDEAARNQVLRDVILPQ-KFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAH 263
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK +V ++ +RLL+TG
Sbjct 264 RIKNEKSKLSETVRELNSENRLLITG 289
> xla:399165 smarca5, iswi; SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member
5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1046
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N ++GILADEMGLGKT+QTI+LL Y+K +++ GPH+++VP STL NW EF+RW
Sbjct 185 ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRW 244
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PSL + G + R R L +++VC+T++++ IRE+S +WR+LV+DE H
Sbjct 245 VPSLCAVCLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAH 304
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN KSK V F ++RLLLTG
Sbjct 305 RIKNEKSKLSEIVREFKTTNRLLLTG 330
> ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding;
K11654 SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1055
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+ LY N ++GILADEMGLGKT+QTI+LLAYL E++ GPH+++ P STL NW +E R+
Sbjct 201 IRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRF 260
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P L+ + F G ERR ++ L F++C+T+F++AI+E++AL SWR++++DE H
Sbjct 261 CPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAH 320
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN S ++ FS ++RLL+TG
Sbjct 321 RIKNENSLLSKTMRLFSTNYRLLITG 346
> ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1069
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+ LY N ++GILADEMGLGKT+QTI+LLAYL E++ GPH+++ P STL NW +E R+
Sbjct 206 IRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRF 265
Query 61 APSLKVMLFKGARLERRQLQRQ-LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P L+ + F G ERR ++ + L F++C+T+F++AI+E++ L SWR++++DE H
Sbjct 266 CPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAH 325
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN S ++ FS ++RLL+TG
Sbjct 326 RIKNENSLLSKTMRLFSTNYRLLITG 351
> ath:AT2G46020 BRM; transcription regulatory protein SNF2, putative
Length=2192
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 97/145 (66%), Gaps = 0/145 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
LSLYNN L+GILADEMGLGKT+Q +AL+AYL EFK N GPHLIIVP + L NW E W
Sbjct 993 LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTW 1052
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
PS+ + + G + +R +L Q+K FNV +TT++ + +RS L+ W+++++DE R
Sbjct 1053 LPSVSCIYYVGTKDQRSKLFSQVKFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQR 1112
Query 121 MKNSKSKFHLSVSSFSASHRLLLTG 145
MK+ +S + + RLLLTG
Sbjct 1113 MKDRESVLARDLDRYRCQRRLLLTG 1137
> ath:AT2G28290 SYD; SYD (SPLAYED); ATPase/ chromatin binding
Length=3543
Score = 146 bits (369), Expect = 2e-35, Method: Composition-based stats.
Identities = 70/148 (47%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNN+L+GILADEMGLGKT+Q I+L+ YL E KN+ GP L++VP S L W E W
Sbjct 766 VSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFW 825
Query 61 APSLKVMLFKGARLERRQL-QRQLKQIDFNVCLTTFDLAI--RERSALATPSWRHLVVDE 117
APS+ +++ G ERR+L + Q+ FNV LTT++ + +R L+ W ++++DE
Sbjct 826 APSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDE 885
Query 118 GHRMKNSKSKFHLSVSSFSASHRLLLTG 145
GHR+KN+ K + + + +SHRLLLTG
Sbjct 886 GHRIKNASCKLNADLKHYVSSHRLLLTG 913
> ath:AT5G19310 homeotic gene regulator, putative; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1064
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLYNN+ +GILADEMGLGKTIQTIAL+AYL E K+ GPHLI+ P + L NW +EF W
Sbjct 398 VSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKAVLPNWENEFALW 457
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
APS+ L+ G++ +R +++ ++ FNV +T +DL +R+++ L W +++VDEGHR
Sbjct 458 APSISAFLYDGSKEKRTEIRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHR 517
Query 121 MKNSKSKFHLSV-SSFSASHRLLLTG 145
+KN + ++ + + RLLLTG
Sbjct 518 LKNHECALAKTLGTGYRIKRRLLLTG 543
> hsa:10847 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-related
CREBBP activator protein; K11661 helicase SRCAP [EC:3.6.4.-]
Length=3230
Score = 145 bits (367), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+++Y L+GILADEMGLGKTIQTI+LLA+L K N GPHLIIVP S + NW E +RW
Sbjct 630 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 689
Query 61 APSLKVMLFKGARLERRQLQRQ--LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEG 118
PS K++ + GA+ ER+ L+RQ K F+VC+T++ L +++ A +WR+L++DE
Sbjct 690 CPSFKILTYYGAQKERK-LKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEA 748
Query 119 HRMKNSKSKFHLSVSSFSASHRLLLTG 145
+KN KS+ S+ +F++ RLLLTG
Sbjct 749 QNIKNFKSQRWQSLLNFNSQRRLLLTG 775
> mmu:100043597 Srcap, B930091H02Rik, D030022P06Rik, F630004O05Rik;
Snf2-related CREBBP activator protein; K11661 helicase
SRCAP [EC:3.6.4.-]
Length=3237
Score = 145 bits (366), Expect = 4e-35, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+++Y L+GILADEMGLGKTIQTI+LLA+L K N GPHLIIVP S + NW E +RW
Sbjct 642 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 701
Query 61 APSLKVMLFKGARLERRQLQRQ--LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEG 118
PS K++ + GA+ ER+ L+RQ K F+VC+T++ L +++ A +WR+L++DE
Sbjct 702 CPSFKILTYYGAQKERK-LKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEA 760
Query 119 HRMKNSKSKFHLSVSSFSASHRLLLTG 145
+KN KS+ S+ +F++ RLLLTG
Sbjct 761 QNIKNFKSQRWQSLLNFNSQRRLLLTG 787
> ath:AT3G06010 ATCHR12; ATP binding / DNA binding / helicase/
nucleic acid binding; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
2/4 [EC:3.6.4.-]
Length=1132
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SL+NNNL+GILADEMGLGKTIQTI+L+AYL E K GP+LI+ P + L NW +EF W
Sbjct 445 VSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATW 504
Query 61 APSLKVMLFKGARLERRQLQRQLK-QIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
PS+ L+ G ER+ ++ ++ + FNV +T +DL +R+++ L W +++VDEGH
Sbjct 505 VPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGH 564
Query 120 RMKNSKSKFHLS-VSSFSASHRLLLTG 145
R+KN +S + ++ + RLLLTG
Sbjct 565 RLKNHESALAKTLLTGYRIKRRLLLTG 591
> sce:YDR334W SWR1; Swi2/Snf2-related ATPase that is the structural
component of the SWR1 complex, which exchanges histone
variant H2AZ (Htz1p) for chromatin-bound histone H2A (EC:3.6.1.-);
K11681 helicase SWR1 [EC:3.6.4.12]
Length=1514
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Query 2 SLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWA 61
SLYNN+ +GILADEMGLGKTIQTI+LLAYL K N GPHLI+VP S L NW EF+R+A
Sbjct 709 SLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFA 768
Query 62 PSLKVMLFKGARLERRQLQRQLKQID-FNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
P KV+ + G+ +R++ ++ + D F+VC+ ++ L ++++ + W+++V+DE H
Sbjct 769 PGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHN 828
Query 121 MKNSKSKFHLSVSSFSASHRLLLTG 145
+KN +S ++ +F+ RLLLTG
Sbjct 829 IKNFRSTRWQALLNFNTQRRLLLTG 853
> cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like
helicase and a bromo domain ; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1673
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTL-SNWADEFER 59
+SLYNNNL+GILAD MGLGKT+QT+++LA++ E K N GPHLII PLSTL NW +EF R
Sbjct 757 VSLYNNNLNGILADAMGLGKTVQTVSVLAHIYENKGNRGPHLIIAPLSTLHGNWENEFNR 816
Query 60 WAPSLKVMLFKGARLERRQLQRQL--KQIDFNVCLTTFDLAIRERSALATPSWRHLVVDE 117
W P ++++G + R+Q++ + + F+V LTT ++++ L W +++VDE
Sbjct 817 WLPDFVKVIYEGNKEIRKQIRSKYMTGEAKFHVLLTTDAFIMKDKHYLRKFDWEYIIVDE 876
Query 118 GHRMKNSKSKF-HLSVSSFSASHRLLLTG 145
HR+KN KSK + + F A HRL LTG
Sbjct 877 AHRLKNPKSKLVQILNNGFRAKHRLALTG 905
> sce:YBR245C ISW1, SGN2; Isw1p (EC:3.6.1.-)
Length=1129
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SL+ N + GILADEMGLGKT+QTI+ L YL+ + GP L+I P STL+NW E RW
Sbjct 208 VSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRW 267
Query 61 APSLKVMLFKGARLERRQL-QRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P + + +G + ER +L Q++L DF+V + ++++ IRE+S L +W ++++DE H
Sbjct 268 TPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAH 327
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN +S + F++ +RLL+TG
Sbjct 328 RIKNEESMLSQVLREFTSRNRLLITG 353
> sce:YOR304W ISW2; ATP-dependent DNA translocase involved in
chromatin remodeling; ATPase component that, with Itc1p, forms
a complex required for repression of A-specific genes, INO1,
and early meiotic genes during mitotic growth (EC:3.6.1.-)
Length=1120
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SL+ N L GILADEMGLGKT+QTI+ L YL+ K GP LIIVP STL NW EF +W
Sbjct 196 ISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKW 255
Query 61 APSLKVMLFKGARLERRQLQRQLK-QIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P++ V++ G + R + R + + F+V +T++++ IRE++AL +W+++V+DE H
Sbjct 256 TPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAH 315
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN +S + F + +RLL+TG
Sbjct 316 RIKNEQSALSQIIRLFYSKNRLLITG 341
> mmu:68058 Chd1l, 4432404A22Rik, Alc1, Snf2p; chromodomain helicase
DNA binding protein 1-like (EC:3.6.4.12)
Length=900
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query 11 ILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAPSLKVMLFK 70
IL DEMGLGKT QTIALL YL N+ GP L++ PLS LSNW +E ER+AP L + +
Sbjct 62 ILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYT 121
Query 71 GARLERRQLQRQLKQID-FNVCLTTFDLAIRERSALATPSWRHLVVDEGHRMKNSKSKFH 129
G + ER +LQ+ L+Q F+V LTT+++ +++ S L + SW L VDE HR+KN S H
Sbjct 122 GDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLH 181
Query 130 LSVSSFSASHRLLLTG 145
++S FSA RLLLTG
Sbjct 182 RTLSEFSAVFRLLLTG 197
> sce:YER164W CHD1; Chd1p (EC:3.6.1.-); K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1468
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 100/153 (65%), Gaps = 10/153 (6%)
Query 3 LYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAP 62
L++ +GILADEMGLGKT+QT+A +++L + GPH+I+VPLST+ W D FE+WAP
Sbjct 390 LWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAP 449
Query 63 SLKVMLFKGARLERRQLQ----------RQLKQIDFNVCLTTFDLAIRERSALATPSWRH 112
L + + G + R ++ + K + FNV LTT++ +++R+ L + W+
Sbjct 450 DLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQF 509
Query 113 LVVDEGHRMKNSKSKFHLSVSSFSASHRLLLTG 145
+ VDE HR+KN++S + S++SF ++R+L+TG
Sbjct 510 MAVDEAHRLKNAESSLYESLNSFKVANRMLITG 542
> bbo:BBOV_IV008380 23.m05834; SNF2 helicase (EC:3.6.1.-)
Length=894
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+ LY+ N++GILADEMGLGKT QTI+LLAYLKE + G HL+I P ST+ NW +E R+
Sbjct 98 VGLYDRNMNGILADEMGLGKTFQTISLLAYLKESRGIDGLHLVIAPKSTIGNWINEINRF 157
Query 61 APSLKVMLFKGARLERRQL-QRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P L+V+ F G + ER + +L ++V +T+++ + ++AL+ + ++++DE H
Sbjct 158 CPDLRVLKFIGNKEERSYMVSHELDSSKYDVIVTSYETCCKAKNALSKLQFHYIIIDEAH 217
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
R+KN +SK V F +RLL+TG
Sbjct 218 RIKNEESKLSEVVRVFHTEYRLLITG 243
> ath:AT3G12810 PIE1; PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING
1); ATP binding / DNA binding / helicase/ nucleic acid
binding; K11320 E1A-binding protein p400 [EC:3.6.4.-]
Length=2055
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 100/147 (68%), Gaps = 3/147 (2%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+++Y L+GILADEMGLGKTI TIALLA+L K GPHLI+VP S + NW EF +W
Sbjct 548 VTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKW 607
Query 61 APSLKVMLFKGARLERRQLQRQ--LKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEG 118
P+ K++ + G+ ER+ L+RQ +K F+VC+TT+ L I++ W++L++DE
Sbjct 608 CPAFKILTYFGSAKERK-LKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEA 666
Query 119 HRMKNSKSKFHLSVSSFSASHRLLLTG 145
H +KN KS+ ++ +F++ R+LLTG
Sbjct 667 HLIKNWKSQRWQTLLNFNSKRRILLTG 693
> hsa:9557 CHD1L, ALC1, CHDL, FLJ22530; chromodomain helicase
DNA binding protein 1-like (EC:3.6.4.12)
Length=897
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query 11 ILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAPSLKVMLFK 70
IL DEMGLGKT QTIAL YL N+ GP LI+ PLS LSNW +E +R+AP L + +
Sbjct 68 ILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYA 127
Query 71 GARLERRQLQRQLKQID-FNVCLTTFDLAIRERSALATPSWRHLVVDEGHRMKNSKSKFH 129
G + ER LQ+ LKQ F+V LTT+++ +++ S L + W LVVDE HR+KN S H
Sbjct 128 GDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLH 187
Query 130 LSVSSFSASHRLLLTG 145
++S FS LLLTG
Sbjct 188 KTLSEFSVVFSLLLTG 203
> ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding
/ DNA binding / chromatin binding / helicase/ nucleic acid
binding; K11367 chromodomain-helicase-DNA-binding protein
1 [EC:3.6.4.12]
Length=1724
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 100/148 (67%), Gaps = 8/148 (5%)
Query 6 NNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAPSLK 65
N+ + ILADEMGLGKT+Q++++L +L+ + GP L++VPLSTL+NWA EF +W P +
Sbjct 642 NDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMN 701
Query 66 VMLFKGARLERRQLQRQL--------KQIDFNVCLTTFDLAIRERSALATPSWRHLVVDE 117
++++ G R R Q+ + I FN LTT+++ +++++ L+ W +L+VDE
Sbjct 702 IIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDE 761
Query 118 GHRMKNSKSKFHLSVSSFSASHRLLLTG 145
HR+KNS+++ + ++ FS ++LL+TG
Sbjct 762 AHRLKNSEAQLYTALLEFSTKNKLLITG 789
> hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lymphoid-specific
Length=838
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query 3 LYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAP 62
L+ N ++GILADEMGLGKT+Q IA +A + + + GP L+ PLSTL NW EF+R+ P
Sbjct 237 LWENGINGILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGPLSTLPNWMAEFKRFTP 295
Query 63 SLKVMLFKGARLERRQLQRQLK------QIDFNVCLTTFDLAIRERSALATPSWRHLVVD 116
+ ML+ G + ER++L R + QI V +T+F++A+R+R+AL W++L+VD
Sbjct 296 DIPTMLYHGTQEERQKLVRNIYKRKGTLQI-HPVVITSFEIAMRDRNALQHCYWKYLIVD 354
Query 117 EGHRMKNSKSKFHLSVSSFSASHRLLLTG 145
EGHR+KN K + + F+A ++LLLTG
Sbjct 355 EGHRIKNMKCRLIRELKRFNADNKLLLTG 383
> cpv:cgd8_3080 Swr1p like SWI/SNF2 family ATpase with a HSA domain
at the N-terminus probably involved in chromatin remodelling
Length=1371
Score = 130 bits (326), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+ LY L+GILADEMGLGKTIQTI+LLAYL + N GPHLI+VP S + NW EF+RW
Sbjct 350 VKLYKKGLNGILADEMGLGKTIQTISLLAYLACYMKNWGPHLIVVPTSVMLNWEMEFKRW 409
Query 61 APSLKVMLFKGARLERRQLQRQLKQID-FNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P KV+ + G ER++ + + FNVC+ ++ L +++ W++L++DE
Sbjct 410 LPCFKVITYFGTPKERQKKRIGWNDPNAFNVCIASYTLILQDAHIFKRKQWQYLILDEAQ 469
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
+KN KS+ + SF+ RLLLTG
Sbjct 470 NIKNFKSQKWQVMLSFNTERRLLLTG 495
> tpv:TP03_0128 global transcription activator
Length=998
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTL-SNWADEFER 59
+SLYNN L+GILADEMGLGKTIQTIALL YLKE K G H++I PLSTL SNW EFE
Sbjct 455 VSLYNNKLNGILADEMGLGKTIQTIALLIYLKENKGISGNHIVIAPLSTLHSNWKTEFEL 514
Query 60 WAPSLKVMLFKGARLERRQLQRQL---KQIDFNVCLTTFDLAIRERSALATPSWRHLVVD 116
W PS K+ +++G++ R+ L+ + +++F+V LT+ +R+++ L W +L++D
Sbjct 515 WYPSFKLCVYEGSKEFRKNLRMKWYSGNKLNFDVLLTSETFVLRDKNFLKKICWEYLIID 574
Query 117 EGHRMKNSKSK 127
E H+ K+ SK
Sbjct 575 EVHKFKSENSK 585
> dre:393283 chd1l, MGC56084, zgc:56084; chromodomain helicase
DNA binding protein 1-like (EC:3.6.4.12)
Length=1026
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query 1 LSLYNNNLHG-ILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFER 59
LSL N G IL DEMGLGKT QTI+LLAY + GP L++ PL+ L NW E ER
Sbjct 46 LSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELER 105
Query 60 WAPSLKVMLFKGARLERRQLQRQLK-QIDFNVCLTTFDLAIRERSALATPSWRHLVVDEG 118
+ PSL V+ + G + +R +LQ+ LK F+V LTT+++ +++ L + W+ LVVDE
Sbjct 106 FCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEA 165
Query 119 HRMKNSKSKFHLSVSSFSASHRLLLTG 145
HR+KN +S H ++ F+ R+LLTG
Sbjct 166 HRLKNQESLLHQTLKEFTVGFRVLLTG 192
> mmu:15201 Hells, AI323785, E130115I21Rik, LSH, Lysh, PASG, YFK8;
helicase, lymphoid specific
Length=821
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 6/148 (4%)
Query 3 LYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAP 62
L+ N ++GILADEMGLGKT+Q IA +A + + + GP L+ PLSTL NW EF+R+ P
Sbjct 220 LWENGINGILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGPLSTLPNWMAEFKRFTP 278
Query 63 SLKVMLFKGARLERRQL-----QRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDE 117
+ +L+ G R +RR+L +RQ V +T+F++A+R+++AL W++L+VDE
Sbjct 279 EIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAMRDQNALQHCYWKYLIVDE 338
Query 118 GHRMKNSKSKFHLSVSSFSASHRLLLTG 145
GHR+KN K + + F+A ++LLLTG
Sbjct 339 GHRIKNMKCRLIRELKRFNADNKLLLTG 366
> xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lymphoid-specific
Length=838
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 99/148 (66%), Gaps = 6/148 (4%)
Query 3 LYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERWAP 62
L+ N ++GILADEMGLGKT+Q IA ++ + E + GP + PLSTL NW EF+R++P
Sbjct 235 LWENGINGILADEMGLGKTVQCIATISMMVE-RGVPGPFFVCGPLSTLPNWVSEFKRFSP 293
Query 63 SLKVMLFKGARLERRQLQRQLKQID-----FNVCLTTFDLAIRERSALATPSWRHLVVDE 117
+ V+L+ G +RR+L R++ + + F V +T+F++A+R+R L +W+++++DE
Sbjct 294 EIPVLLYHGNAQDRRRLARKINKREGSLQLFPVVITSFEIAMRDRPVLQHNAWKYMILDE 353
Query 118 GHRMKNSKSKFHLSVSSFSASHRLLLTG 145
GHR+KN + + F + ++LLLTG
Sbjct 354 GHRIKNMNCRLIQELKLFRSDNKLLLTG 381
> tpv:TP01_1132 ATP-dependent helicase
Length=1632
Score = 126 bits (317), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
+SLY N++GILADEMGLGKT+QTI LLAYL K N GPH+I+VP S L NW EF ++
Sbjct 710 VSLYERNINGILADEMGLGKTLQTICLLAYLACNKGNWGPHIIVVPTSILLNWVMEFNKF 769
Query 61 APSLKVMLFKGARLERRQLQRQL-KQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGH 119
P K++ + G ER + + K FNV +T++ + +++ L +W ++++DE
Sbjct 770 CPGFKILAYYGTPAERSKKRTGWNKPHSFNVLITSYSIVVQDSYVLKRRAWEYMILDEAQ 829
Query 120 RMKNSKSKFHLSVSSFSASHRLLLTG 145
+KN SK ++ +F+ +RLLLTG
Sbjct 830 NIKNFTSKRWQTLLTFNTKYRLLLTG 855
Lambda K H
0.322 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2807590228
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40